Difference between revisions of "UBERON:0009113"
From FANTOM5_SSTAR
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|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
− | |part_of= | + | |part_of=UBERON:0000153 |
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} |
Revision as of 04:44, 27 June 2012
Name: | thymic region |
---|
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0000475(organism subdivision) |
---|---|
part_of: | UBERON:0000153(anterior region of body) |
Children
part of: | UBERON:0002370 (thymus) |
---|
Ontology Tree: Loaded from BioPortal
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10027-101D9 (thymus, adult, pool1)
- 10043-101F7 (thymus, fetal, pool1)
- 10097-102C7
- 10803-111A2 (thymic carcinoma cell line:Ty-82)
- 1273-19G4 (thymus, embryo E18)
- 12971-138H1 (TSt-4/DLL1 feeder cells, biol_rep1)
- 12987-138I8 (TSt-4/DLL1 feeder cells, biol_rep2)
- 13003-139B6 (TSt-4/DLL1 feeder cells, biol_rep3)
- 1362-25G7 (thymus, neonate N25)
- 1393-42G2 (thymus, neonate N30)
... further results Mouse (Mus musculus)
- 10027-101D9 (thymus, adult, pool1)
- 10043-101F7 (thymus, fetal, pool1)
- 10097-102C7
- 10803-111A2 (thymic carcinoma cell line:Ty-82)
- 1273-19G4 (thymus, embryo E18)
- 12971-138H1 (TSt-4/DLL1 feeder cells, biol_rep1)
- 12987-138I8 (TSt-4/DLL1 feeder cells, biol_rep2)
- 13003-139B6 (TSt-4/DLL1 feeder cells, biol_rep3)
- 1362-25G7 (thymus, neonate N25)
- 1393-42G2 (thymus, neonate N30)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009113 (thymic region), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
6.94e-147 | FFCP PHASE1:Hg19::chr14:22928012..22928031,+#_331c1a3647b16751a4bf04f5a2f0769e | p3@uc001wea.3, p3@uc010ajt.2, p3@uc010aju.1 |
6.94e-147 | FFCP PHASE2:Hg19::chr14:22928012..22928031,+#_331c1a3647b16751a4bf04f5a2f0769e | p3@uc001wea.3, p3@uc010ajt.2, p3@uc010aju.1 |
8.91e-111 | FFCP PHASE2:Hg19::chr14:22927984..22927999,+#_95d92fe8ce0839c014a896cb6478737e | p4@uc001wea.3, p4@uc010ajt.2, p4@uc010aju.1 |
8.91e-111 | FFCP PHASE1:Hg19::chr14:22927984..22927999,+#_95d92fe8ce0839c014a896cb6478737e | p4@uc001wea.3, p4@uc010ajt.2, p4@uc010aju.1 |
1.55e-98 | FFCP PHASE1:Hg19::chr10:11486829..11486836,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr10:11486829..11486836, + |
1.55e-98 | FFCP PHASE1:Hg19::chr10:11486877..11486886,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr10:11486877..11486886, + |
1.55e-98 | FFCP PHASE1:Hg19::chr10:115022988..115023001,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr10:115022988..115023001, + |
1.55e-98 | FFCP PHASE1:Hg19::chr10:115023005..115023015,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr10:115023005..115023015, + |
1.55e-98 | FFCP PHASE1:Hg19::chr10:115023055..115023072,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr10:115023055..115023072, + |
1.55e-98 | FFCP PHASE1:Hg19::chr10:115023094..115023106,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr10:115023094..115023106, + |
1.55e-98 | FFCP PHASE1:Hg19::chr10:26726728..26726731,+#_8a1b4292d0531dbc5fd700b862461d3f | p17@APBB1IP |
1.55e-98 | FFCP PHASE1:Hg19::chr10:72542272..72542281,-#_8a1b4292d0531dbc5fd700b862461d3f | p6@C10orf27 |
1.55e-98 | FFCP PHASE1:Hg19::chr11:36589389..36589398,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr11:36589389..36589398, - |
1.55e-98 | FFCP PHASE1:Hg19::chr11:36622593..36622605,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr11:36622593..36622605, + |
1.55e-98 | FFCP PHASE1:Hg19::chr11:6953654..6953661,+#_8a1b4292d0531dbc5fd700b862461d3f | p5@ZNF215 |
1.55e-98 | FFCP PHASE1:Hg19::chr11:8954087..8954092,-#_8a1b4292d0531dbc5fd700b862461d3f | p1@AB527792 |
1.55e-98 | FFCP PHASE1:Hg19::chr12:123559708..123559720,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr12:123559708..123559720, - |
1.55e-98 | FFCP PHASE1:Hg19::chr12:123559773..123559784,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr12:123559773..123559784, - |
1.55e-98 | FFCP PHASE1:Hg19::chr12:123560608..123560615,-#_8a1b4292d0531dbc5fd700b862461d3f | p24@PITPNM2 |
1.55e-98 | FFCP PHASE1:Hg19::chr12:123560793..123560802,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr12:123560793..123560802, + |
1.55e-98 | FFCP PHASE1:Hg19::chr12:123607146..123607168,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr12:123607146..123607168, - |
1.55e-98 | FFCP PHASE1:Hg19::chr12:123627753..123627760,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr12:123627753..123627760, + |
1.55e-98 | FFCP PHASE1:Hg19::chr12:123634449..123634460,-#_8a1b4292d0531dbc5fd700b862461d3f | p25@PITPNM2 |
1.55e-98 | FFCP PHASE1:Hg19::chr12:123636839..123636885,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr12:123636839..123636885, - |
1.55e-98 | FFCP PHASE1:Hg19::chr12:133413547..133413557,-#_8a1b4292d0531dbc5fd700b862461d3f | p13@POLE |
1.55e-98 | FFCP PHASE1:Hg19::chr12:133414662..133414671,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr12:133414662..133414671, - |
1.55e-98 | FFCP PHASE1:Hg19::chr12:47205180..47205187,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr12:47205180..47205187, + |
1.55e-98 | FFCP PHASE1:Hg19::chr12:48225126..48225164,+#_8a1b4292d0531dbc5fd700b862461d3f | p1@ENST00000548564, p1@ENST00000550720, p1@ENST00000550909 |
1.55e-98 | FFCP PHASE1:Hg19::chr12:48227243..48227269,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr12:48227243..48227269, + |
1.55e-98 | FFCP PHASE1:Hg19::chr12:59432175..59432191,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr12:59432175..59432191, + |
1.55e-98 | FFCP PHASE1:Hg19::chr13:99628323..99628332,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr13:99628323..99628332, - |
1.55e-98 | FFCP PHASE1:Hg19::chr13:99628347..99628352,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr13:99628347..99628352, - |
1.55e-98 | FFCP PHASE1:Hg19::chr13:99628369..99628374,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr13:99628369..99628374, - |
1.55e-98 | FFCP PHASE1:Hg19::chr13:99628388..99628399,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr13:99628388..99628399, - |
1.55e-98 | FFCP PHASE1:Hg19::chr14:22942319..22942322,+#_8a1b4292d0531dbc5fd700b862461d3f | p4@uc001wec.2 |
1.55e-98 | FFCP PHASE1:Hg19::chr14:98229095..98229108,-#_8a1b4292d0531dbc5fd700b862461d3f | p1@ENST00000555187 |
1.55e-98 | FFCP PHASE1:Hg19::chr15:56940722..56940731,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr15:56940722..56940731, + |
1.55e-98 | FFCP PHASE1:Hg19::chr15:56940732..56940741,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr15:56940732..56940741, + |
1.55e-98 | FFCP PHASE1:Hg19::chr15:57017749..57017755,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr15:57017749..57017755, - |
1.55e-98 | FFCP PHASE1:Hg19::chr15:58069384..58069408,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr15:58069384..58069408, + |
1.55e-98 | FFCP PHASE1:Hg19::chr15:58069582..58069594,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr15:58069582..58069594, + |
1.55e-98 | FFCP PHASE1:Hg19::chr15:58069597..58069604,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr15:58069597..58069604, + |
1.55e-98 | FFCP PHASE1:Hg19::chr15:58069758..58069762,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr15:58069758..58069762, + |
1.55e-98 | FFCP PHASE1:Hg19::chr15:58920068..58920073,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr15:58920068..58920073, - |
1.55e-98 | FFCP PHASE1:Hg19::chr15:60131313..60131324,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr15:60131313..60131324, - |
1.55e-98 | FFCP PHASE1:Hg19::chr15:60131337..60131352,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr15:60131337..60131352, - |
1.55e-98 | FFCP PHASE1:Hg19::chr15:60131355..60131365,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr15:60131355..60131365, - |
1.55e-98 | FFCP PHASE1:Hg19::chr15:99071828..99071840,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr15:99071828..99071840, + |
1.55e-98 | FFCP PHASE1:Hg19::chr16:49633750..49633778,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr16:49633750..49633778, - |
1.55e-98 | FFCP PHASE1:Hg19::chr16:74359040..74359071,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr16:74359040..74359071, + |
1.55e-98 | FFCP PHASE1:Hg19::chr17:4090402..4090406,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr17:4090402..4090406, - |
1.55e-98 | FFCP PHASE1:Hg19::chr17:76274572..76274581,-#_8a1b4292d0531dbc5fd700b862461d3f | p4@ENST00000374945 |
1.55e-98 | FFCP PHASE1:Hg19::chr17:76274646..76274658,-#_8a1b4292d0531dbc5fd700b862461d3f | p2@ENST00000374945 |
1.55e-98 | FFCP PHASE1:Hg19::chr17:80866179..80866188,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr17:80866179..80866188, + |
1.55e-98 | FFCP PHASE1:Hg19::chr18:13437980..13437986,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr18:13437980..13437986, + |
1.55e-98 | FFCP PHASE1:Hg19::chr19:28877072..28877084,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr19:28877072..28877084, - |
1.55e-98 | FFCP PHASE1:Hg19::chr1:158170478..158170491,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr1:158170478..158170491, - |
1.55e-98 | FFCP PHASE1:Hg19::chr1:158226030..158226041,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr1:158226030..158226041, + |
1.55e-98 | FFCP PHASE1:Hg19::chr1:158259849..158259854,+#_8a1b4292d0531dbc5fd700b862461d3f | p11@CD1C |
1.55e-98 | FFCP PHASE1:Hg19::chr1:158260453..158260459,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr1:158260453..158260459, - |
1.55e-98 | FFCP PHASE1:Hg19::chr1:158260649..158260652,+#_8a1b4292d0531dbc5fd700b862461d3f | p13@CD1C |
1.55e-98 | FFCP PHASE1:Hg19::chr1:158301280..158301298,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr1:158301280..158301298, + |
1.55e-98 | FFCP PHASE1:Hg19::chr1:158303678..158303720,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr1:158303678..158303720, - |
1.55e-98 | FFCP PHASE1:Hg19::chr1:158332631..158332640,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr1:158332631..158332640, + |
1.55e-98 | FFCP PHASE1:Hg19::chr1:158334207..158334219,-#_8a1b4292d0531dbc5fd700b862461d3f | p1@AK128347 |
1.55e-98 | FFCP PHASE1:Hg19::chr1:160643269..160643276,+#_8a1b4292d0531dbc5fd700b862461d3f | p5@ENST00000443928 |
1.55e-98 | FFCP PHASE1:Hg19::chr1:160643289..160643296,+#_8a1b4292d0531dbc5fd700b862461d3f | p4@ENST00000443928 |
1.55e-98 | FFCP PHASE1:Hg19::chr1:194245598..194245600,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr1:194245598..194245600, - |
1.55e-98 | FFCP PHASE1:Hg19::chr1:199026759..199026762,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr1:199026759..199026762, + |
1.55e-98 | FFCP PHASE1:Hg19::chr1:200500161..200500173,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr1:200500161..200500173, - |
1.55e-98 | FFCP PHASE1:Hg19::chr1:204494413..204494420,+#_8a1b4292d0531dbc5fd700b862461d3f | p17@MDM4 |
1.55e-98 | FFCP PHASE1:Hg19::chr1:204494427..204494436,+#_8a1b4292d0531dbc5fd700b862461d3f | p15@MDM4 |
1.55e-98 | FFCP PHASE1:Hg19::chr1:204507243..204507252,+#_8a1b4292d0531dbc5fd700b862461d3f | p19@MDM4 |
1.55e-98 | FFCP PHASE1:Hg19::chr1:2084380..2084413,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr1:2084380..2084413, - |
1.55e-98 | FFCP PHASE1:Hg19::chr1:26320241..26320248,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr1:26320241..26320248, - |
1.55e-98 | FFCP PHASE1:Hg19::chr1:32314477..32314482,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr1:32314477..32314482, + |
1.55e-98 | FFCP PHASE1:Hg19::chr1:44035057..44035068,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr1:44035057..44035068, + |
1.55e-98 | FFCP PHASE1:Hg19::chr1:44035233..44035242,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr1:44035233..44035242, + |
1.55e-98 | FFCP PHASE1:Hg19::chr1:55776022..55776029,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr1:55776022..55776029, - |
1.55e-98 | FFCP PHASE1:Hg19::chr1:55776031..55776038,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr1:55776031..55776038, - |
1.55e-98 | FFCP PHASE1:Hg19::chr20:30272266..30272271,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr20:30272266..30272271, - |
1.55e-98 | FFCP PHASE1:Hg19::chr20:58830665..58830675,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr20:58830665..58830675, + |
1.55e-98 | FFCP PHASE1:Hg19::chr20:58830799..58830808,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr20:58830799..58830808, + |
1.55e-98 | FFCP PHASE1:Hg19::chr20:58830811..58830825,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr20:58830811..58830825, + |
1.55e-98 | FFCP PHASE1:Hg19::chr20:58830826..58830835,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr20:58830826..58830835, + |
1.55e-98 | FFCP PHASE1:Hg19::chr20:58833004..58833011,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr20:58833004..58833011, + |
1.55e-98 | FFCP PHASE1:Hg19::chr22:48475770..48475779,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr22:48475770..48475779, - |
1.55e-98 | FFCP PHASE1:Hg19::chr2:162762361..162762364,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr2:162762361..162762364, + |
1.55e-98 | FFCP PHASE1:Hg19::chr2:227771044..227771054,+#_8a1b4292d0531dbc5fd700b862461d3f | p9@RHBDD1 |
1.55e-98 | FFCP PHASE1:Hg19::chr2:227771357..227771363,+#_8a1b4292d0531dbc5fd700b862461d3f | p10@RHBDD1 |
1.55e-98 | FFCP PHASE1:Hg19::chr2:233102726..233102734,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr2:233102726..233102734, + |
1.55e-98 | FFCP PHASE1:Hg19::chr2:233184654..233184661,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr2:233184654..233184661, - |
1.55e-98 | FFCP PHASE1:Hg19::chr2:242080265..242080277,-#_8a1b4292d0531dbc5fd700b862461d3f | p20@PASK |
1.55e-98 | FFCP PHASE1:Hg19::chr2:57846504..57846542,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr2:57846504..57846542, + |
1.55e-98 | FFCP PHASE1:Hg19::chr2:57926329..57926337,-#_8a1b4292d0531dbc5fd700b862461d3f | p@chr2:57926329..57926337, - |
1.55e-98 | FFCP PHASE1:Hg19::chr2:86992669..86992684,+#_8a1b4292d0531dbc5fd700b862461d3f | p8@RMND5A |
1.55e-98 | FFCP PHASE1:Hg19::chr2:86998329..86998374,+#_8a1b4292d0531dbc5fd700b862461d3f | p16@RMND5A |
1.55e-98 | FFCP PHASE1:Hg19::chr2:87017428..87017437,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr2:87017428..87017437, + |
1.55e-98 | FFCP PHASE1:Hg19::chr2:87018380..87018390,-#_8a1b4292d0531dbc5fd700b862461d3f | p6@CD8A |
1.55e-98 | FFCP PHASE1:Hg19::chr2:87018900..87018905,+#_8a1b4292d0531dbc5fd700b862461d3f | p@chr2:87018900..87018905, + |