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Difference between revisions of "UBERON:0009113"

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|located_in=
 
|located_in=
 
|name=thymic region
 
|name=thymic region
|namespace=
+
|namespace=FANTOM
 
|obo_creation_date=
 
|obo_creation_date=
 
|part_of=UBERON:0000153
 
|part_of=UBERON:0000153

Latest revision as of 09:04, 12 September 2014

Name:thymic region
Namespace:FANTOM

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000475(organism subdivision)
part_of:UBERON:0000153(anterior region of body)



Children

part of:UBERON:0002370 (thymus)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009113 (thymic region), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
6.94e-147FFCP PHASE1:Hg19::chr14:22928012..22928031,+#_331c1a3647b16751a4bf04f5a2f0769ep3@uc001wea.3, p3@uc010ajt.2, p3@uc010aju.1
6.94e-147FFCP PHASE2:Hg19::chr14:22928012..22928031,+#_331c1a3647b16751a4bf04f5a2f0769ep3@uc001wea.3, p3@uc010ajt.2, p3@uc010aju.1
8.91e-111FFCP PHASE2:Hg19::chr14:22927984..22927999,+#_95d92fe8ce0839c014a896cb6478737ep4@uc001wea.3, p4@uc010ajt.2, p4@uc010aju.1
8.91e-111FFCP PHASE1:Hg19::chr14:22927984..22927999,+#_95d92fe8ce0839c014a896cb6478737ep4@uc001wea.3, p4@uc010ajt.2, p4@uc010aju.1
1.55e-98FFCP PHASE1:Hg19::chr10:11486829..11486836,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr10:11486829..11486836, +
1.55e-98FFCP PHASE1:Hg19::chr10:11486877..11486886,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr10:11486877..11486886, +
1.55e-98FFCP PHASE1:Hg19::chr10:115022988..115023001,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr10:115022988..115023001, +
1.55e-98FFCP PHASE1:Hg19::chr10:115023005..115023015,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr10:115023005..115023015, +
1.55e-98FFCP PHASE1:Hg19::chr10:115023055..115023072,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr10:115023055..115023072, +
1.55e-98FFCP PHASE1:Hg19::chr10:115023094..115023106,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr10:115023094..115023106, +
1.55e-98FFCP PHASE1:Hg19::chr10:26726728..26726731,+#_8a1b4292d0531dbc5fd700b862461d3fp17@APBB1IP
1.55e-98FFCP PHASE1:Hg19::chr10:72542272..72542281,-#_8a1b4292d0531dbc5fd700b862461d3fp6@C10orf27
1.55e-98FFCP PHASE1:Hg19::chr11:36589389..36589398,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr11:36589389..36589398, -
1.55e-98FFCP PHASE1:Hg19::chr11:36622593..36622605,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr11:36622593..36622605, +
1.55e-98FFCP PHASE1:Hg19::chr11:6953654..6953661,+#_8a1b4292d0531dbc5fd700b862461d3fp5@ZNF215
1.55e-98FFCP PHASE1:Hg19::chr11:8954087..8954092,-#_8a1b4292d0531dbc5fd700b862461d3fp1@AB527792
1.55e-98FFCP PHASE1:Hg19::chr12:123559708..123559720,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr12:123559708..123559720, -
1.55e-98FFCP PHASE1:Hg19::chr12:123559773..123559784,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr12:123559773..123559784, -
1.55e-98FFCP PHASE1:Hg19::chr12:123560608..123560615,-#_8a1b4292d0531dbc5fd700b862461d3fp24@PITPNM2
1.55e-98FFCP PHASE1:Hg19::chr12:123560793..123560802,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr12:123560793..123560802, +
1.55e-98FFCP PHASE1:Hg19::chr12:123607146..123607168,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr12:123607146..123607168, -
1.55e-98FFCP PHASE1:Hg19::chr12:123627753..123627760,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr12:123627753..123627760, +
1.55e-98FFCP PHASE1:Hg19::chr12:123634449..123634460,-#_8a1b4292d0531dbc5fd700b862461d3fp25@PITPNM2
1.55e-98FFCP PHASE1:Hg19::chr12:123636839..123636885,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr12:123636839..123636885, -
1.55e-98FFCP PHASE1:Hg19::chr12:133413547..133413557,-#_8a1b4292d0531dbc5fd700b862461d3fp13@POLE
1.55e-98FFCP PHASE1:Hg19::chr12:133414662..133414671,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr12:133414662..133414671, -
1.55e-98FFCP PHASE1:Hg19::chr12:47205180..47205187,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr12:47205180..47205187, +
1.55e-98FFCP PHASE1:Hg19::chr12:48225126..48225164,+#_8a1b4292d0531dbc5fd700b862461d3fp1@ENST00000548564, p1@ENST00000550720, p1@ENST00000550909
1.55e-98FFCP PHASE1:Hg19::chr12:48227243..48227269,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr12:48227243..48227269, +
1.55e-98FFCP PHASE1:Hg19::chr12:59432175..59432191,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr12:59432175..59432191, +
1.55e-98FFCP PHASE1:Hg19::chr13:99628323..99628332,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr13:99628323..99628332, -
1.55e-98FFCP PHASE1:Hg19::chr13:99628347..99628352,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr13:99628347..99628352, -
1.55e-98FFCP PHASE1:Hg19::chr13:99628369..99628374,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr13:99628369..99628374, -
1.55e-98FFCP PHASE1:Hg19::chr13:99628388..99628399,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr13:99628388..99628399, -
1.55e-98FFCP PHASE1:Hg19::chr14:22942319..22942322,+#_8a1b4292d0531dbc5fd700b862461d3fp4@uc001wec.2
1.55e-98FFCP PHASE1:Hg19::chr14:98229095..98229108,-#_8a1b4292d0531dbc5fd700b862461d3fp1@ENST00000555187
1.55e-98FFCP PHASE1:Hg19::chr15:56940722..56940731,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr15:56940722..56940731, +
1.55e-98FFCP PHASE1:Hg19::chr15:56940732..56940741,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr15:56940732..56940741, +
1.55e-98FFCP PHASE1:Hg19::chr15:57017749..57017755,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr15:57017749..57017755, -
1.55e-98FFCP PHASE1:Hg19::chr15:58069384..58069408,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr15:58069384..58069408, +
1.55e-98FFCP PHASE1:Hg19::chr15:58069582..58069594,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr15:58069582..58069594, +
1.55e-98FFCP PHASE1:Hg19::chr15:58069597..58069604,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr15:58069597..58069604, +
1.55e-98FFCP PHASE1:Hg19::chr15:58069758..58069762,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr15:58069758..58069762, +
1.55e-98FFCP PHASE1:Hg19::chr15:58920068..58920073,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr15:58920068..58920073, -
1.55e-98FFCP PHASE1:Hg19::chr15:60131313..60131324,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr15:60131313..60131324, -
1.55e-98FFCP PHASE1:Hg19::chr15:60131337..60131352,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr15:60131337..60131352, -
1.55e-98FFCP PHASE1:Hg19::chr15:60131355..60131365,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr15:60131355..60131365, -
1.55e-98FFCP PHASE1:Hg19::chr15:99071828..99071840,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr15:99071828..99071840, +
1.55e-98FFCP PHASE1:Hg19::chr16:49633750..49633778,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr16:49633750..49633778, -
1.55e-98FFCP PHASE1:Hg19::chr16:74359040..74359071,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr16:74359040..74359071, +
1.55e-98FFCP PHASE1:Hg19::chr17:4090402..4090406,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr17:4090402..4090406, -
1.55e-98FFCP PHASE1:Hg19::chr17:76274572..76274581,-#_8a1b4292d0531dbc5fd700b862461d3fp4@ENST00000374945
1.55e-98FFCP PHASE1:Hg19::chr17:76274646..76274658,-#_8a1b4292d0531dbc5fd700b862461d3fp2@ENST00000374945
1.55e-98FFCP PHASE1:Hg19::chr17:80866179..80866188,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr17:80866179..80866188, +
1.55e-98FFCP PHASE1:Hg19::chr18:13437980..13437986,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr18:13437980..13437986, +
1.55e-98FFCP PHASE1:Hg19::chr19:28877072..28877084,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr19:28877072..28877084, -
1.55e-98FFCP PHASE1:Hg19::chr1:158170478..158170491,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr1:158170478..158170491, -
1.55e-98FFCP PHASE1:Hg19::chr1:158226030..158226041,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr1:158226030..158226041, +
1.55e-98FFCP PHASE1:Hg19::chr1:158259849..158259854,+#_8a1b4292d0531dbc5fd700b862461d3fp11@CD1C
1.55e-98FFCP PHASE1:Hg19::chr1:158260453..158260459,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr1:158260453..158260459, -
1.55e-98FFCP PHASE1:Hg19::chr1:158260649..158260652,+#_8a1b4292d0531dbc5fd700b862461d3fp13@CD1C
1.55e-98FFCP PHASE1:Hg19::chr1:158301280..158301298,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr1:158301280..158301298, +
1.55e-98FFCP PHASE1:Hg19::chr1:158303678..158303720,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr1:158303678..158303720, -
1.55e-98FFCP PHASE1:Hg19::chr1:158332631..158332640,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr1:158332631..158332640, +
1.55e-98FFCP PHASE1:Hg19::chr1:158334207..158334219,-#_8a1b4292d0531dbc5fd700b862461d3fp1@AK128347
1.55e-98FFCP PHASE1:Hg19::chr1:160643269..160643276,+#_8a1b4292d0531dbc5fd700b862461d3fp5@ENST00000443928
1.55e-98FFCP PHASE1:Hg19::chr1:160643289..160643296,+#_8a1b4292d0531dbc5fd700b862461d3fp4@ENST00000443928
1.55e-98FFCP PHASE1:Hg19::chr1:194245598..194245600,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr1:194245598..194245600, -
1.55e-98FFCP PHASE1:Hg19::chr1:199026759..199026762,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr1:199026759..199026762, +
1.55e-98FFCP PHASE1:Hg19::chr1:200500161..200500173,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr1:200500161..200500173, -
1.55e-98FFCP PHASE1:Hg19::chr1:204494413..204494420,+#_8a1b4292d0531dbc5fd700b862461d3fp17@MDM4
1.55e-98FFCP PHASE1:Hg19::chr1:204494427..204494436,+#_8a1b4292d0531dbc5fd700b862461d3fp15@MDM4
1.55e-98FFCP PHASE1:Hg19::chr1:204507243..204507252,+#_8a1b4292d0531dbc5fd700b862461d3fp19@MDM4
1.55e-98FFCP PHASE1:Hg19::chr1:2084380..2084413,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr1:2084380..2084413, -
1.55e-98FFCP PHASE1:Hg19::chr1:26320241..26320248,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr1:26320241..26320248, -
1.55e-98FFCP PHASE1:Hg19::chr1:32314477..32314482,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr1:32314477..32314482, +
1.55e-98FFCP PHASE1:Hg19::chr1:44035057..44035068,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr1:44035057..44035068, +
1.55e-98FFCP PHASE1:Hg19::chr1:44035233..44035242,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr1:44035233..44035242, +
1.55e-98FFCP PHASE1:Hg19::chr1:55776022..55776029,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr1:55776022..55776029, -
1.55e-98FFCP PHASE1:Hg19::chr1:55776031..55776038,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr1:55776031..55776038, -
1.55e-98FFCP PHASE1:Hg19::chr20:30272266..30272271,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr20:30272266..30272271, -
1.55e-98FFCP PHASE1:Hg19::chr20:58830665..58830675,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr20:58830665..58830675, +
1.55e-98FFCP PHASE1:Hg19::chr20:58830799..58830808,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr20:58830799..58830808, +
1.55e-98FFCP PHASE1:Hg19::chr20:58830811..58830825,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr20:58830811..58830825, +
1.55e-98FFCP PHASE1:Hg19::chr20:58830826..58830835,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr20:58830826..58830835, +
1.55e-98FFCP PHASE1:Hg19::chr20:58833004..58833011,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr20:58833004..58833011, +
1.55e-98FFCP PHASE1:Hg19::chr22:48475770..48475779,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr22:48475770..48475779, -
1.55e-98FFCP PHASE1:Hg19::chr2:162762361..162762364,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr2:162762361..162762364, +
1.55e-98FFCP PHASE1:Hg19::chr2:227771044..227771054,+#_8a1b4292d0531dbc5fd700b862461d3fp9@RHBDD1
1.55e-98FFCP PHASE1:Hg19::chr2:227771357..227771363,+#_8a1b4292d0531dbc5fd700b862461d3fp10@RHBDD1
1.55e-98FFCP PHASE1:Hg19::chr2:233102726..233102734,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr2:233102726..233102734, +
1.55e-98FFCP PHASE1:Hg19::chr2:233184654..233184661,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr2:233184654..233184661, -
1.55e-98FFCP PHASE1:Hg19::chr2:242080265..242080277,-#_8a1b4292d0531dbc5fd700b862461d3fp20@PASK
1.55e-98FFCP PHASE1:Hg19::chr2:57846504..57846542,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr2:57846504..57846542, +
1.55e-98FFCP PHASE1:Hg19::chr2:57926329..57926337,-#_8a1b4292d0531dbc5fd700b862461d3fp@chr2:57926329..57926337, -
1.55e-98FFCP PHASE1:Hg19::chr2:86992669..86992684,+#_8a1b4292d0531dbc5fd700b862461d3fp8@RMND5A
1.55e-98FFCP PHASE1:Hg19::chr2:86998329..86998374,+#_8a1b4292d0531dbc5fd700b862461d3fp16@RMND5A
1.55e-98FFCP PHASE1:Hg19::chr2:87017428..87017437,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr2:87017428..87017437, +
1.55e-98FFCP PHASE1:Hg19::chr2:87018380..87018390,-#_8a1b4292d0531dbc5fd700b862461d3fp6@CD8A
1.55e-98FFCP PHASE1:Hg19::chr2:87018900..87018905,+#_8a1b4292d0531dbc5fd700b862461d3fp@chr2:87018900..87018905, +