Personal tools

UBERON:0009201

From FANTOM5_SSTAR

Revision as of 11:46, 12 September 2014 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:nephric duct
Definition:"A nephric duct is a tube that drains a primitive kidney[GO]." [GO:0072176]
Comments:pronephric duct or mesonephric duct

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003914(epithelial tube),UBERON:0004819(kidney epithelium),UBERON:0006553(renal duct)
union_of:UBERON:0003060(pronephric duct),UBERON:0003074(mesonephric duct)
part_of:UBERON:0002113(kidney)



Children

is a:UBERON:0003060 (pronephric duct),UBERON:0003074 (mesonephric duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009201 (nephric duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_e2abe83880ba1d2bc690a5cf9591ad22p4@Spink12
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_e2abe83880ba1d2bc690a5cf9591ad22p4@Spink12
3.28e-58FFCP PHASE1:Mm9::chr7:148445639..148445665,+#_006addc8dc83332a4f4d9db9adb060d7p@chr7:148445639..148445665, +
3.28e-58FFCP PHASE2:Mm9::chr1:192816674..192816714,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:192816674..192816714, +
3.28e-58FFCP PHASE1:Mm9::chr2:148676901..148676906,-#_006addc8dc83332a4f4d9db9adb060d7p8@9230104L09Rik
3.28e-58FFCP PHASE1:Mm9::chr11:96150839..96150842,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:96150839..96150842, -
3.28e-58FFCP PHASE2:Mm9::chr2:148676901..148676906,-#_006addc8dc83332a4f4d9db9adb060d7p8@9230104L09Rik
3.28e-58FFCP PHASE1:Mm9::chrX:12571771..12571780,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:12571771..12571780, -
3.28e-58FFCP PHASE2:Mm9::chr8:22061721..22061728,-#_006addc8dc83332a4f4d9db9adb060d7p2@Gm6040, p2@LOC100503992
3.28e-58FFCP PHASE2:Mm9::chr11:34107562..34107572,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:34107562..34107572, -
3.28e-58FFCP PHASE2:Mm9::chr1:155722142..155722175,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:155722142..155722175, -
3.28e-58FFCP PHASE1:Mm9::chr14:63611303..63611312,+#_006addc8dc83332a4f4d9db9adb060d7p@chr14:63611303..63611312, +
3.28e-58FFCP PHASE1:Mm9::chr8:25706249..25706254,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:25706249..25706254, +
3.28e-58FFCP PHASE1:Mm9::chr7:6204391..6204398,+#_006addc8dc83332a4f4d9db9adb060d7p2@Gm6792
3.28e-58FFCP PHASE1:Mm9::chr12:110131610..110131621,-#_006addc8dc83332a4f4d9db9adb060d7p11@Wars
3.28e-58FFCP PHASE2:Mm9::chrX:10488683..10488691,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:10488683..10488691, +
3.28e-58FFCP PHASE2:Mm9::chr13:21379322..21379338,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379322..21379338, -
3.28e-58FFCP PHASE2:Mm9::chr9:35651807..35651818,-#_006addc8dc83332a4f4d9db9adb060d7p3@9230110F15Rik
3.28e-58FFCP PHASE1:Mm9::chr3:103650758..103650778,+#_006addc8dc83332a4f4d9db9adb060d7p@chr3:103650758..103650778, +
3.28e-58FFCP PHASE2:Mm9::chr6:18338054..18338077,-#_006addc8dc83332a4f4d9db9adb060d7p@chr6:18338054..18338077, -
3.28e-58FFCP PHASE2:Mm9::chr9:26731771..26731780,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26731771..26731780, -
3.28e-58FFCP PHASE2:Mm9::chr7:109379335..109379338,+#_006addc8dc83332a4f4d9db9adb060d7p21@Pgap2
3.28e-58FFCP PHASE2:Mm9::chr8:19141447..19141469,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:19141447..19141469, +
3.28e-58FFCP PHASE2:Mm9::chr11:20817297..20817313,+#_006addc8dc83332a4f4d9db9adb060d7p@chr11:20817297..20817313, +
3.28e-58FFCP PHASE1:Mm9::chr13:21379430..21379437,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379430..21379437, -
3.28e-58FFCP PHASE2:Mm9::chr1:90156002..90156013,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:90156002..90156013, +
3.28e-58FFCP PHASE1:Mm9::chr4:106730107..106730125,-#_006addc8dc83332a4f4d9db9adb060d7p@chr4:106730107..106730125, -
3.28e-58FFCP PHASE1:Mm9::chr2:25677632..25677636,-#_006addc8dc83332a4f4d9db9adb060d7p@chr2:25677632..25677636, -
3.28e-58FFCP PHASE1:Mm9::chr13:23683348..23683398,+#_006addc8dc83332a4f4d9db9adb060d7p@chr13:23683348..23683398, +
3.28e-58FFCP PHASE1:Mm9::chr9:35651764..35651782,-#_006addc8dc83332a4f4d9db9adb060d7p2@9230110F15Rik
3.28e-58FFCP PHASE1:Mm9::chr2:164434346..164434353,-#_006addc8dc83332a4f4d9db9adb060d7p@chr2:164434346..164434353, -
3.28e-58FFCP PHASE2:Mm9::chr13:21379125..21379144,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379125..21379144, -
3.28e-58FFCP PHASE1:Mm9::chr16:28323634..28323657,-#_006addc8dc83332a4f4d9db9adb060d7p@chr16:28323634..28323657, -
3.28e-58FFCP PHASE2:Mm9::chr11:59845404..59845416,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:59845404..59845416, -
3.28e-58FFCP PHASE2:Mm9::chr1:36016859..36016897,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:36016859..36016897, +
3.28e-58FFCP PHASE1:Mm9::chr18:44319583..44319592,-#_006addc8dc83332a4f4d9db9adb060d7p@chr18:44319583..44319592, -
3.28e-58FFCP PHASE2:Mm9::chr14:52542711..52542716,-#_006addc8dc83332a4f4d9db9adb060d7p2@Rnase13
3.28e-58FFCP PHASE2:Mm9::chr14:103837894..103837900,+#_006addc8dc83332a4f4d9db9adb060d7p@chr14:103837894..103837900, +
3.28e-58FFCP PHASE1:Mm9::chrX:75798097..75798101,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:75798097..75798101, -
3.28e-58FFCP PHASE2:Mm9::chr12:110131610..110131621,-#_006addc8dc83332a4f4d9db9adb060d7p11@Wars
3.28e-58FFCP PHASE2:Mm9::chr1:43367743..43367754,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:43367743..43367754, -
3.28e-58FFCP PHASE2:Mm9::chr11:96150839..96150842,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:96150839..96150842, -
3.28e-58FFCP PHASE2:Mm9::chr5:110773795..110773801,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:110773795..110773801, +
3.28e-58FFCP PHASE2:Mm9::chr5:35930667..35930691,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:35930667..35930691, +
3.28e-58FFCP PHASE2:Mm9::chr16:28323634..28323657,-#_006addc8dc83332a4f4d9db9adb060d7p@chr16:28323634..28323657, -
3.28e-58FFCP PHASE1:Mm9::chr1:90155951..90155962,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:90155951..90155962, +
3.28e-58FFCP PHASE2:Mm9::chr13:52712765..52712772,+#_006addc8dc83332a4f4d9db9adb060d7p@chr13:52712765..52712772, +
3.28e-58FFCP PHASE1:Mm9::chr1:155697874..155697885,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:155697874..155697885, -
3.28e-58FFCP PHASE2:Mm9::chr14:51734060..51734066,+#_006addc8dc83332a4f4d9db9adb060d7p5@Eddm3b
3.28e-58FFCP PHASE1:Mm9::chr7:109379339..109379349,+#_006addc8dc83332a4f4d9db9adb060d7p15@Pgap2
3.28e-58FFCP PHASE1:Mm9::chr5:35930667..35930691,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:35930667..35930691, +
3.28e-58FFCP PHASE2:Mm9::chr5:31379486..31379501,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379486..31379501, +
3.28e-58FFCP PHASE2:Mm9::chr8:19062951..19062955,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:19062951..19062955, +
3.28e-58FFCP PHASE1:Mm9::chr2:25348986..25348999,-#_006addc8dc83332a4f4d9db9adb060d7p4@Lcn12
3.28e-58FFCP PHASE1:Mm9::chr2:152302739..152302742,+#_006addc8dc83332a4f4d9db9adb060d7p5@Defb20
3.28e-58FFCP PHASE1:Mm9::chr11:98567868..98567884,-#_006addc8dc83332a4f4d9db9adb060d7p5@Med24
3.28e-58FFCP PHASE1:Mm9::chr11:101958855..101958871,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:101958855..101958871, -
3.28e-58FFCP PHASE1:Mm9::chrX:130496286..130496293,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:130496286..130496293, -
3.28e-58FFCP PHASE2:Mm9::chrX:75798157..75798162,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:75798157..75798162, -
3.28e-58FFCP PHASE1:Mm9::chr5:110773795..110773801,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:110773795..110773801, +
3.28e-58FFCP PHASE2:Mm9::chr11:101958887..101958896,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:101958887..101958896, -
3.28e-58FFCP PHASE1:Mm9::chr1:89597660..89597668,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:89597660..89597668, +
3.28e-58FFCP PHASE2:Mm9::chr2:152290340..152290344,-#_006addc8dc83332a4f4d9db9adb060d7p2@Defb23
3.28e-58FFCP PHASE2:Mm9::chr11:53937918..53937922,+#_006addc8dc83332a4f4d9db9adb060d7p7@P4ha2
3.28e-58FFCP PHASE2:Mm9::chr7:56772735..56772741,+#_006addc8dc83332a4f4d9db9adb060d7p@chr7:56772735..56772741, +
3.28e-58FFCP PHASE2:Mm9::chr9:26599476..26599505,-#_006addc8dc83332a4f4d9db9adb060d7p3@Glb1l2
3.28e-58FFCP PHASE2:Mm9::chr4:106730107..106730125,-#_006addc8dc83332a4f4d9db9adb060d7p@chr4:106730107..106730125, -
3.28e-58FFCP PHASE1:Mm9::chr12:114385720..114385732,-#_006addc8dc83332a4f4d9db9adb060d7p@chr12:114385720..114385732, -
3.28e-58FFCP PHASE1:Mm9::chrX:20219008..20219045,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:20219008..20219045, +
3.28e-58FFCP PHASE2:Mm9::chrX:50280152..50280179,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:50280152..50280179, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379454..31379466,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379454..31379466, +
3.28e-58FFCP PHASE2:Mm9::chr13:21380670..21380678,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21380670..21380678, -
3.28e-58FFCP PHASE2:Mm9::chr9:35715997..35716008,+#_006addc8dc83332a4f4d9db9adb060d7p1@9230113P08Rik
3.28e-58FFCP PHASE1:Mm9::chr1:168436322..168436326,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:168436322..168436326, -
3.28e-58FFCP PHASE2:Mm9::chr15:75329148..75329155,+#_006addc8dc83332a4f4d9db9adb060d7p@chr15:75329148..75329155, +
3.28e-58FFCP PHASE1:Mm9::chr14:51677141..51677148,-#_006addc8dc83332a4f4d9db9adb060d7p7@Rnase12
3.28e-58FFCP PHASE1:Mm9::chr13:21378927..21378932,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21378927..21378932, -
3.28e-58FFCP PHASE1:Mm9::chr10:91753336..91753348,-#_006addc8dc83332a4f4d9db9adb060d7p@chr10:91753336..91753348, -
3.28e-58FFCP PHASE2:Mm9::chr1:155698166..155698174,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:155698166..155698174, -
3.28e-58FFCP PHASE1:Mm9::chr14:63611201..63611210,+#_006addc8dc83332a4f4d9db9adb060d7p@chr14:63611201..63611210, +
3.28e-58FFCP PHASE1:Mm9::chr13:21381777..21381789,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21381777..21381789, -
3.28e-58FFCP PHASE1:Mm9::chr17:73221062..73221084,+#_006addc8dc83332a4f4d9db9adb060d7p@chr17:73221062..73221084, +
3.28e-58FFCP PHASE1:Mm9::chr13:52712765..52712772,+#_006addc8dc83332a4f4d9db9adb060d7p@chr13:52712765..52712772, +
3.28e-58FFCP PHASE1:Mm9::chr9:35657557..35657582,-#_006addc8dc83332a4f4d9db9adb060d7p2@Gm3428
3.28e-58FFCP PHASE2:Mm9::chr11:63779573..63779582,+#_006addc8dc83332a4f4d9db9adb060d7p@chr11:63779573..63779582, +
3.28e-58FFCP PHASE1:Mm9::chr2:164464249..164464258,-#_006addc8dc83332a4f4d9db9adb060d7p@chr2:164464249..164464258, -
3.28e-58FFCP PHASE2:Mm9::chr13:21379261..21379264,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379261..21379264, -
3.28e-58FFCP PHASE2:Mm9::chr9:35651650..35651673,-#_006addc8dc83332a4f4d9db9adb060d7p4@9230110F15Rik
3.28e-58FFCP PHASE2:Mm9::chr1:11079838..11079844,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:11079838..11079844, +
3.28e-58FFCP PHASE1:Mm9::chr11:20817297..20817313,+#_006addc8dc83332a4f4d9db9adb060d7p@chr11:20817297..20817313, +
3.28e-58FFCP PHASE2:Mm9::chr2:152388977..152388983,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:152388977..152388983, +
3.28e-58FFCP PHASE2:Mm9::chrX:20419453..20419476,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:20419453..20419476, +
3.28e-58FFCP PHASE2:Mm9::chr8:126591032..126591039,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:126591032..126591039, +
3.28e-58FFCP PHASE1:Mm9::chr1:156048695..156048707,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:156048695..156048707, +
3.28e-58FFCP PHASE2:Mm9::chr3:65253465..65253475,+#_006addc8dc83332a4f4d9db9adb060d7p@chr3:65253465..65253475, +
3.28e-58FFCP PHASE2:Mm9::chr18:62816857..62816866,+#_006addc8dc83332a4f4d9db9adb060d7p7@Spink10
3.28e-58FFCP PHASE2:Mm9::chr18:44319583..44319592,-#_006addc8dc83332a4f4d9db9adb060d7p@chr18:44319583..44319592, -
3.28e-58FFCP PHASE1:Mm9::chr1:36016859..36016897,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:36016859..36016897, +
3.28e-58FFCP PHASE1:Mm9::chr8:22061721..22061728,-#_006addc8dc83332a4f4d9db9adb060d7p2@Gm6040, p2@LOC100503992
3.28e-58FFCP PHASE2:Mm9::chr4:33600466..33600491,-#_006addc8dc83332a4f4d9db9adb060d7p@chr4:33600466..33600491, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0009201&oldid=3274635"