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(Created page with "{{UBERON |id=UBERON:0010077 |name=cuboidal epithelium |namespace= |def= |xref=ncithesaurus:Cuboidal_Epithelium |is_a=UBERON:0000483 |synonym= |comment=AO notes: in NCI...")
 
 
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{{UBERON
 
{{UBERON
|id=UBERON:0010077
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|alt_id=
|name=cuboidal epithelium
 
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|xref=ncithesaurus:Cuboidal_Epithelium
 
|is_a=UBERON:0000483
 
|synonym=
 
 
|comment=AO notes: in NCIT this is glandular
 
|comment=AO notes: in NCIT this is glandular
|alt_id=
 
|disjoint_from=
 
|union_of=
 
 
|created_by=
 
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|derives_from=
 
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|disjoint_from=
 
|has_quality=
 
|has_quality=
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|id=UBERON:0010077
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|is_a=UBERON:0000483
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|is_obsolete=
 
|located_in=
 
|located_in=
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|name=cuboidal epithelium
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|namespace=FANTOM
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|obo_creation_date=
 
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
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|xref=ncithesaurus:Cuboidal_Epithelium
 
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Latest revision as of 09:07, 12 September 2014

Name:cuboidal epithelium
Namespace:FANTOM
Xrefs:
links:
ncithesaurus:Cuboidal_Epithelium
Comments:AO notes: in NCIT this is glandular

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000483(epithelium)



Children

is a:UBERON:0000484 (simple cuboidal epithelium)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010077 (cuboidal epithelium), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.41e-88FFCP PHASE1:Hg19::chr22:25595823..25595826,+#_87d613a6233da88d2a452f832bb43e1bp1@CRYBB3
1.41e-88FFCP PHASE2:Hg19::chr22:25595823..25595826,+#_87d613a6233da88d2a452f832bb43e1bp1@CRYBB3
3.32e-74FFCP PHASE1:Hg19::chr22:25615600..25615611,+#_e387c0581b12d408ac0027aa1340882ap1@CRYBB2
3.32e-74FFCP PHASE2:Hg19::chr22:25615600..25615611,+#_e387c0581b12d408ac0027aa1340882ap1@CRYBB2
5.48e-74FFCP PHASE2:Hg19::chr19:51891222..51891233,-#_9d596227366d3210aaafd8ca03c45c64p1@LIM2
5.48e-74FFCP PHASE1:Hg19::chr19:51891222..51891233,-#_9d596227366d3210aaafd8ca03c45c64p1@LIM2
3.8e-56FFCP PHASE1:Hg19::chr22:27017921..27017928,+#_9a4ec77b2c3681d8e641109b9f9284eap1@CRYBA4
3.8e-56FFCP PHASE2:Hg19::chr22:27017921..27017928,+#_9a4ec77b2c3681d8e641109b9f9284eap1@CRYBA4
3.1e-50FFCP PHASE1:Hg19::chr20:61204240..61204241,+#_17c788988f30f0b1f41bf0d0f4a66151p@chr20:61204240..61204241, +
3.1e-50FFCP PHASE2:Hg19::chr13:104778247..104778293,+#_17c788988f30f0b1f41bf0d0f4a66151p@chr13:104778247..104778293, +
3.1e-50FFCP PHASE2:Hg19::chr20:61204240..61204241,+#_17c788988f30f0b1f41bf0d0f4a66151p@chr20:61204240..61204241, +
3.1e-50FFCP PHASE1:Hg19::chr13:104778247..104778293,+#_17c788988f30f0b1f41bf0d0f4a66151p@chr13:104778247..104778293, +
5.14e-50FFCP PHASE1:Hg19::chr21:44592820..44592840,-#_c511136a68c1818b5503660b3f475305p2@CU686889
5.14e-50FFCP PHASE1:Hg19::chr14:37642016..37642022,-#_c511136a68c1818b5503660b3f475305p7@SLC25A21
5.14e-50FFCP PHASE2:Hg19::chr14:37642016..37642022,-#_c511136a68c1818b5503660b3f475305p7@SLC25A21
5.14e-50FFCP PHASE2:Hg19::chr21:44592820..44592840,-#_c511136a68c1818b5503660b3f475305p2@CU686889
6.6e-50FFCP PHASE2:Hg19::chr21:44592842..44592867,-#_10285a9a3567411e1a6def0f5c8035dep1@CU686889
6.6e-50FFCP PHASE2:Hg19::chr12:132475501..132475504,+#_10285a9a3567411e1a6def0f5c8035dep@chr12:132475501..132475504, +
6.6e-50FFCP PHASE1:Hg19::chr12:132475501..132475504,+#_10285a9a3567411e1a6def0f5c8035dep@chr12:132475501..132475504, +
6.6e-50FFCP PHASE2:Hg19::chr21:44589339..44589372,-#_10285a9a3567411e1a6def0f5c8035dep@chr21:44589339..44589372, -
6.6e-50FFCP PHASE1:Hg19::chr21:44592842..44592867,-#_10285a9a3567411e1a6def0f5c8035dep1@CU686889
6.6e-50FFCP PHASE1:Hg19::chr21:44589339..44589372,-#_10285a9a3567411e1a6def0f5c8035dep@chr21:44589339..44589372, -
6.27e-44FFCP PHASE1:Hg19::chr11:31827535..31827565,-#_aef441c90c101ba87a27224fa527e270p11@PAX6
6.27e-44FFCP PHASE2:Hg19::chr11:31827535..31827565,-#_aef441c90c101ba87a27224fa527e270p11@PAX6
1.92e-41FFCP PHASE1:Hg19::chr3:186262166..186262170,-#_25261972c72c60411d6f96a602c1b11dp1@CRYGS
1.92e-41FFCP PHASE2:Hg19::chr3:186262166..186262170,-#_25261972c72c60411d6f96a602c1b11dp1@CRYGS
4.94e-40FFCP PHASE1:Hg19::chr5:112173525..112173532,+#_7b3a00d4d408abfc6fe12070663d5c16p@chr5:112173525..112173532, +
4.94e-40FFCP PHASE2:Hg19::chr5:112173525..112173532,+#_7b3a00d4d408abfc6fe12070663d5c16p@chr5:112173525..112173532, +
1.62e-37FFCP PHASE2:Hg19::chr1:29586692..29586705,+#_98c950c7c4cda382276364d5b7dcac9ap7@PTPRU
1.62e-37FFCP PHASE1:Hg19::chr1:29586692..29586705,+#_98c950c7c4cda382276364d5b7dcac9ap7@PTPRU
2.1e-35FFCP PHASE2:Hg19::chr14:60975644..60975673,+#_c36315ecc8e82319854c300ef3af29d3p3@SIX6
2.1e-35FFCP PHASE1:Hg19::chr14:60975644..60975673,+#_c36315ecc8e82319854c300ef3af29d3p3@SIX6
6.73e-35FFCP PHASE2:Hg19::chr14:60975871..60975880,+#_53723211f256c2eebb04c7007d956bd4p4@SIX6
6.73e-35FFCP PHASE1:Hg19::chr14:60975871..60975880,+#_53723211f256c2eebb04c7007d956bd4p4@SIX6
5.06e-34FFCP PHASE2:Hg19::chr11:31667372..31667383,-#_08c78aeb55416f8d3bb571ec83f9a666p@chr11:31667372..31667383, -
5.06e-34FFCP PHASE1:Hg19::chr11:31667372..31667383,-#_08c78aeb55416f8d3bb571ec83f9a666p@chr11:31667372..31667383, -
8.36e-34FFCP PHASE1:Hg19::chr19:1470631..1470648,-#_ee2f58e8ccb6a5d9ba099e8b7cc79bb5p@chr19:1470631..1470648, -
8.36e-34FFCP PHASE2:Hg19::chr19:1470631..1470648,-#_ee2f58e8ccb6a5d9ba099e8b7cc79bb5p@chr19:1470631..1470648, -
5.55e-33FFCP PHASE2:Hg19::chr21:44589135..44589151,+#_368708ca725f35814601821649df8affp1@CRYAA
5.55e-33FFCP PHASE1:Hg19::chr21:44589135..44589151,+#_368708ca725f35814601821649df8affp1@CRYAA
9.55e-33FFCP PHASE1:Hg19::chr17:27573875..27573878,+#_b71fed6f7b5afcd82ea45f720bedbfa9p1@CRYBA1
9.55e-33FFCP PHASE2:Hg19::chr17:27573875..27573878,+#_b71fed6f7b5afcd82ea45f720bedbfa9p1@CRYBA1
2.74e-29FFCP PHASE2:Hg19::chr2:45168589..45168601,-#_d240d260ef773c954b672aa4298cd72fp2@ENST00000456467
2.74e-29FFCP PHASE1:Hg19::chr2:45168589..45168601,-#_d240d260ef773c954b672aa4298cd72fp2@ENST00000456467
3.65e-29FFCP PHASE1:Hg19::chr7:107883678..107883689,-#_29c5da89a348d88b2de169b1022992b4p13@NRCAM
3.65e-29FFCP PHASE2:Hg19::chr7:107883678..107883689,-#_29c5da89a348d88b2de169b1022992b4p13@NRCAM
7.46e-29FFCP PHASE1:Hg19::chr13:114202163..114202178,+#_904e2c55774bebf46b386b2df1a30cdcp@chr13:114202163..114202178, +
7.46e-29FFCP PHASE2:Hg19::chr13:114202163..114202178,+#_904e2c55774bebf46b386b2df1a30cdcp@chr13:114202163..114202178, +
1.36e-28FFCP PHASE1:Hg19::chr3:173116225..173116242,+#_8bd174efa4f4001dd34b446a6fe6ac04p10@NLGN1
1.36e-28FFCP PHASE2:Hg19::chr3:173116225..173116242,+#_8bd174efa4f4001dd34b446a6fe6ac04p10@NLGN1
2.64e-27FFCP PHASE1:Hg19::chr2:45169233..45169244,+#_458de518f67527723c0e76d1958cb135p10@SIX3
2.64e-27FFCP PHASE2:Hg19::chr2:45169233..45169244,+#_458de518f67527723c0e76d1958cb135p10@SIX3
8.39e-27FFCP PHASE1:Hg19::chr14:60975858..60975869,+#_07cd2690850dea9534574b38bd616071p2@SIX6
8.39e-27FFCP PHASE2:Hg19::chr14:60975858..60975869,+#_07cd2690850dea9534574b38bd616071p2@SIX6
5.56e-26FFCP PHASE2:Hg19::chr1:147374915..147374932,+#_3f977e2aee0d5d1bcdd9601e58afbfa5p1@GJA8
5.56e-26FFCP PHASE1:Hg19::chr19:40920692..40920700,-#_3f977e2aee0d5d1bcdd9601e58afbfa5p@chr19:40920692..40920700, -
5.56e-26FFCP PHASE2:Hg19::chr20:35861148..35861151,+#_3f977e2aee0d5d1bcdd9601e58afbfa5p@chr20:35861148..35861151, +
5.56e-26FFCP PHASE2:Hg19::chr19:40920692..40920700,-#_3f977e2aee0d5d1bcdd9601e58afbfa5p@chr19:40920692..40920700, -
5.56e-26FFCP PHASE1:Hg19::chr3:150690809..150690822,-#_3f977e2aee0d5d1bcdd9601e58afbfa5p3@CLRN1
5.56e-26FFCP PHASE2:Hg19::chr9:75848662..75848671,-#_3f977e2aee0d5d1bcdd9601e58afbfa5p@chr9:75848662..75848671, -
5.56e-26FFCP PHASE2:Hg19::chrX:43587410..43587413,+#_3f977e2aee0d5d1bcdd9601e58afbfa5p@chrX:43587410..43587413, +
5.56e-26FFCP PHASE2:Hg19::chr3:150690809..150690822,-#_3f977e2aee0d5d1bcdd9601e58afbfa5p3@CLRN1
5.56e-26FFCP PHASE1:Hg19::chr9:75848662..75848671,-#_3f977e2aee0d5d1bcdd9601e58afbfa5p@chr9:75848662..75848671, -
5.56e-26FFCP PHASE1:Hg19::chrX:43587410..43587413,+#_3f977e2aee0d5d1bcdd9601e58afbfa5+, p@chrX:43587410..43587413
5.56e-26FFCP PHASE1:Hg19::chr1:147374915..147374932,+#_3f977e2aee0d5d1bcdd9601e58afbfa5p1@GJA8
5.56e-26FFCP PHASE1:Hg19::chr20:35861148..35861151,+#_3f977e2aee0d5d1bcdd9601e58afbfa5p@chr20:35861148..35861151, +
7.14e-26FFCP PHASE1:Hg19::chr5:124468141..124468176,-#_78837f5820cfc47694358cc1f4b38949p@chr5:124468141..124468176, -
7.14e-26FFCP PHASE1:Hg19::chr5:45038620..45038622,+#_78837f5820cfc47694358cc1f4b38949p@chr5:45038620..45038622, +
7.14e-26FFCP PHASE1:Hg19::chr1:45769711..45769721,-#_78837f5820cfc47694358cc1f4b38949p@chr1:45769711..45769721, -
7.14e-26FFCP PHASE1:Hg19::chr12:56848437..56848442,-#_78837f5820cfc47694358cc1f4b38949p1@MIP
7.14e-26FFCP PHASE1:Hg19::chr1:115873480..115873484,+#_78837f5820cfc47694358cc1f4b38949p@chr1:115873480..115873484, +
7.14e-26FFCP PHASE2:Hg19::chr2:10538258..10538282,+#_78837f5820cfc47694358cc1f4b38949p@chr2:10538258..10538282, +
7.14e-26FFCP PHASE2:Hg19::chr21:44592512..44592521,+#_78837f5820cfc47694358cc1f4b38949+, p@chr21:44592512..44592521
7.14e-26FFCP PHASE1:Hg19::chr13:44875179..44875188,-#_78837f5820cfc47694358cc1f4b38949-, p@chr13:44875179..44875188
7.14e-26FFCP PHASE2:Hg19::chr10:73406056..73406065,+#_78837f5820cfc47694358cc1f4b38949p@chr10:73406056..73406065, +
7.14e-26FFCP PHASE1:Hg19::chr20:33903184..33903189,-#_78837f5820cfc47694358cc1f4b38949p11@UQCC
7.14e-26FFCP PHASE1:Hg19::chr21:44592358..44592365,+#_78837f5820cfc47694358cc1f4b38949p@chr21:44592358..44592365, +
7.14e-26FFCP PHASE2:Hg19::chr1:115873480..115873484,+#_78837f5820cfc47694358cc1f4b38949p@chr1:115873480..115873484, +
7.14e-26FFCP PHASE2:Hg19::chr1:86064794..86064797,+#_78837f5820cfc47694358cc1f4b38949p1@ENST00000426794
7.14e-26FFCP PHASE2:Hg19::chr4:140656282..140656285,-#_78837f5820cfc47694358cc1f4b38949-, p@chr4:140656282..140656285
7.14e-26FFCP PHASE1:Hg19::chr21:44592788..44592807,+#_78837f5820cfc47694358cc1f4b38949p@chr21:44592788..44592807, +
7.14e-26FFCP PHASE1:Hg19::chr2:693025..693036,+#_78837f5820cfc47694358cc1f4b38949p@chr2:693025..693036, +
7.14e-26FFCP PHASE2:Hg19::chr9:100057272..100057276,+#_78837f5820cfc47694358cc1f4b38949p@chr9:100057272..100057276, +
7.14e-26FFCP PHASE1:Hg19::chr2:10538258..10538282,+#_78837f5820cfc47694358cc1f4b38949p@chr2:10538258..10538282, +
7.14e-26FFCP PHASE1:Hg19::chr1:86064794..86064797,+#_78837f5820cfc47694358cc1f4b38949p1@ENST00000426794
7.14e-26FFCP PHASE2:Hg19::chr16:17563573..17563582,+#_78837f5820cfc47694358cc1f4b38949p@chr16:17563573..17563582, +
7.14e-26FFCP PHASE2:Hg19::chr1:45769711..45769721,-#_78837f5820cfc47694358cc1f4b38949p@chr1:45769711..45769721, -
7.14e-26FFCP PHASE1:Hg19::chr5:464155..464205,+#_78837f5820cfc47694358cc1f4b38949p@chr5:464155..464205, +
7.14e-26FFCP PHASE2:Hg19::chr3:156322310..156322314,-#_78837f5820cfc47694358cc1f4b38949p@chr3:156322310..156322314, -
7.14e-26FFCP PHASE1:Hg19::chr11:65361417..65361421,-#_78837f5820cfc47694358cc1f4b38949p2@KCNK7
7.14e-26FFCP PHASE1:Hg19::chr16:17563573..17563582,+#_78837f5820cfc47694358cc1f4b38949p@chr16:17563573..17563582, +
7.14e-26FFCP PHASE2:Hg19::chr21:44592626..44592635,-#_78837f5820cfc47694358cc1f4b38949p5@CU686889
7.14e-26FFCP PHASE2:Hg19::chr21:36253916..36253918,-#_78837f5820cfc47694358cc1f4b38949p@chr21:36253916..36253918, -
7.14e-26FFCP PHASE2:Hg19::chr5:45038620..45038622,+#_78837f5820cfc47694358cc1f4b38949p@chr5:45038620..45038622, +
7.14e-26FFCP PHASE1:Hg19::chr16:85617064..85617073,-#_78837f5820cfc47694358cc1f4b38949p@chr16:85617064..85617073, -
7.14e-26FFCP PHASE2:Hg19::chr21:44592750..44592758,-#_78837f5820cfc47694358cc1f4b38949p4@CU686889
7.14e-26FFCP PHASE1:Hg19::chr13:72440726..72440736,-#_78837f5820cfc47694358cc1f4b38949p19@DACH1
7.14e-26FFCP PHASE1:Hg19::chr19:41727698..41727705,+#_78837f5820cfc47694358cc1f4b38949p@chr19:41727698..41727705, +
7.14e-26FFCP PHASE2:Hg19::chr5:124468141..124468176,-#_78837f5820cfc47694358cc1f4b38949p@chr5:124468141..124468176, -
7.14e-26FFCP PHASE1:Hg19::chr21:44592512..44592521,+#_78837f5820cfc47694358cc1f4b38949p@chr21:44592512..44592521, +