UBERON:0011137: Difference between revisions
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|located_in= | |located_in= | ||
|name=axial skeletal system | |name=axial skeletal system | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 18:10, 12 September 2014
| Name: | axial skeletal system | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Subdivision of the skeletal system which consists of the axial skeleton plus associated joints." [UBERON:cjm] | ||
| Xrefs: |
|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000075(subdivision of skeletal system) |
|---|
Children
| part of: | UBERON:0002328 (notochord),UBERON:0010323 (cranial skeletal system) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10195-103E6 (olfactory region, adult)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 11223-116B8 (Fibroblast - Periodontal Ligament, donor4 (PL29))
- 11238-116D5 (Fibroblast - Periodontal Ligament, donor1)
- 11304-117B8 (Fibroblast - Periodontal Ligament, donor5 (PL30))
- 11319-117D5 (Fibroblast - Periodontal Ligament, donor2)
- 11380-118B3 (Fibroblast - Periodontal Ligament, donor6 (PLH3))
- 11395-118C9 (Fibroblast - Periodontal Ligament, donor3)
- 11929-125I3 (Mallassez-derived cells, donor2)
- 11930-125I4 (Mallassez-derived cells, donor3)
... further results Mouse (Mus musculus)
- 10195-103E6 (olfactory region, adult)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 11223-116B8 (Fibroblast - Periodontal Ligament, donor4 (PL29))
- 11238-116D5 (Fibroblast - Periodontal Ligament, donor1)
- 11304-117B8 (Fibroblast - Periodontal Ligament, donor5 (PL30))
- 11319-117D5 (Fibroblast - Periodontal Ligament, donor2)
- 11380-118B3 (Fibroblast - Periodontal Ligament, donor6 (PLH3))
- 11395-118C9 (Fibroblast - Periodontal Ligament, donor3)
- 11929-125I3 (Mallassez-derived cells, donor2)
- 11930-125I4 (Mallassez-derived cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0011137 (axial skeletal system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_88219e40f6759d4b740fc1dfc61e6e3a | p7@Tecta |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr13:78257518..78257522, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr16:93971325..93971337, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_88219e40f6759d4b740fc1dfc61e6e3a | p7@Pkn3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93235253..93235264,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr1:93235253..93235264, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr4:63079735..63079745, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_88219e40f6759d4b740fc1dfc61e6e3a | p3@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr1:93235228..93235249, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr15:12848147..12848162, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr14:47293496..47293510, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr16:93971325..93971337, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_88219e40f6759d4b740fc1dfc61e6e3a | p4@Chrna10 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr19:10536797..10536802, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_88219e40f6759d4b740fc1dfc61e6e3a | p1@Tmc1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:100724698..100724706,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr3:100724698..100724706, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_88219e40f6759d4b740fc1dfc61e6e3a | p1@Tmprss3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr8:13414266..13414279, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr2:53464168..53464175, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr11:89702580..89702593, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13435173..13435186,+#_88219e40f6759d4b740fc1dfc61e6e3a | p6@Fam70b |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78322383..78322395,-#_88219e40f6759d4b740fc1dfc61e6e3a | p2@uc007rhb.1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr14:102297728..102297742, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr1:172843796..172843799, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr1:78523144..78523177, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr15:89215306..89215315, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:31283072..31283081,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr14:31283072..31283081, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:109052262..109052291,-#_88219e40f6759d4b740fc1dfc61e6e3a | p1@Tomt |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:68423014..68423037,+#_88219e40f6759d4b740fc1dfc61e6e3a | p1@Grxcr1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr18:66033526..66033539, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr12:77084875..77084885, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_88219e40f6759d4b740fc1dfc61e6e3a | p5@Tecta |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_88219e40f6759d4b740fc1dfc61e6e3a | p3@Tmprss3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_88219e40f6759d4b740fc1dfc61e6e3a | p2@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr3:35012425..35012439, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr15:89215319..89215330, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr14:102297728..102297742, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207965..42207978,-#_88219e40f6759d4b740fc1dfc61e6e3a | p5@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:30710416..30710440,-#_88219e40f6759d4b740fc1dfc61e6e3a | p2@Otof |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr4:101908153..101908163, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr9:42206784..42206793, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:67011941..67011951,+#_88219e40f6759d4b740fc1dfc61e6e3a | p3@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:172843847..172843880,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr1:172843847..172843880, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr13:37195838..37195870, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr11:114603036..114603048, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr9:66860888..66860899, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr3:154459184..154459195, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr6:113251570..113251578, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_88219e40f6759d4b740fc1dfc61e6e3a | p15@Mctp1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_88219e40f6759d4b740fc1dfc61e6e3a | p2@Fscn2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_88219e40f6759d4b740fc1dfc61e6e3a | p3@Kncn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:45693840..45693856,-#_88219e40f6759d4b740fc1dfc61e6e3a | p1@Tmprss7 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:47293496..47293510,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr14:47293496..47293510, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_88219e40f6759d4b740fc1dfc61e6e3a | p4@BC030867 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:28035962..28035983,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr5:28035962..28035983, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_88219e40f6759d4b740fc1dfc61e6e3a | p4@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr9:50968647..50968668, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:97109753..97109764,+#_88219e40f6759d4b740fc1dfc61e6e3a | p3@Epyc |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr17:13983179..13983190, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:4689837..4689845,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr11:4689837..4689845, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr9:42206784..42206793, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr3:154459184..154459195, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_88219e40f6759d4b740fc1dfc61e6e3a | p3@Gm1322 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:20649897..20649907,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr14:20649897..20649907, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:13572961..13572974,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr12:13572961..13572974, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr1:16651649..16651655, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:43454162..43454170,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr1:43454162..43454170, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:81327205..81327211,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr18:81327205..81327211, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr2:73232344..73232356, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr17:27252925..27252939, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr8:13414266..13414279, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr13:78257454..78257465, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr8:94180607..94180619, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr2:170417150..170417155, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr11:94371127..94371139, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:60561636..60561645,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr1:60561636..60561645, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr11:8405038..8405048, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:182528388..182528403,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr1:182528388..182528403, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_88219e40f6759d4b740fc1dfc61e6e3a | p7@A730017C20Rik |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_88219e40f6759d4b740fc1dfc61e6e3a | p11@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:133802857..133802884,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr4:133802857..133802884, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr2:73232344..73232356, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr17:13983160..13983167, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_88219e40f6759d4b740fc1dfc61e6e3a | p10@Sec11a |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_88219e40f6759d4b740fc1dfc61e6e3a | p2@9230102O04Rik |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr3:31585340..31585360, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_88219e40f6759d4b740fc1dfc61e6e3a | p1@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:55256373..55256384,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr19:55256373..55256384, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_88219e40f6759d4b740fc1dfc61e6e3a | p11@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_88219e40f6759d4b740fc1dfc61e6e3a | p2@Slc26a5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_88219e40f6759d4b740fc1dfc61e6e3a | p4@uc007rhb.1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr1:182528371..182528385, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr7:141605556..141605563, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr16:93971357..93971363, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:30710403..30710406,-#_88219e40f6759d4b740fc1dfc61e6e3a | p10@Otof |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr5:144115382..144115389, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_88219e40f6759d4b740fc1dfc61e6e3a | p11@Tsga14 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_88219e40f6759d4b740fc1dfc61e6e3a | p5@BC030867 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr15:65641741..65641748, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93235253..93235264,+#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr1:93235253..93235264, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_88219e40f6759d4b740fc1dfc61e6e3a | p@chr11:4689837..4689845, - |
