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{{UBERON
{{UBERON
|id=UBERON:0011158
|alt_id=
|name=primary subdivision of skull
|namespace=
|def="The skull can be divided into two: the neurocranium and the facial skeleton" []
|xref=FMA:54964
|is_a=UBERON:0000075
|synonym="skull subdivision" EXACT [FMA:54964];;"subdivision of skull" EXACT [FMA:54964]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="The skull can be divided into two: the neurocranium and the facial skeleton" []
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0011158
|is_a=UBERON:0000075
|is_obsolete=
|located_in=
|located_in=
|name=primary subdivision of skull
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0003129
|part_of=UBERON:0003129
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="skull subdivision" EXACT [FMA:54964];;"subdivision of skull" EXACT [FMA:54964]
|union_of=
|xref=FMA:54964
}}
}}

Latest revision as of 18:10, 12 September 2014

Name:primary subdivision of skull
Namespace:FANTOM
Definition:"The skull can be divided into two: the neurocranium and the facial skeleton" []
Xrefs:
links:
FMA:54964
Synonyms: "skull subdivision" EXACT [FMA:54964]
"subdivision of skull" EXACT [FMA:54964]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000075(subdivision of skeletal system)
part_of:UBERON:0003129(skull)



Children

is a:UBERON:0001703 (neurocranium),UBERON:0011156 (facial skeleton)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0011158 (primary subdivision of skull), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_e3d22b2f1308549011ceff08869d1682p4@Otogl
1.87e-86FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_e3d22b2f1308549011ceff08869d1682p1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_e3d22b2f1308549011ceff08869d1682p@chr14:31283085..31283097, -
1.87e-86FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_e3d22b2f1308549011ceff08869d1682p2@9230102O04Rik
1.87e-86FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_e3d22b2f1308549011ceff08869d1682p@chr17:13983102..13983126, +
1.87e-86FFCP PHASE2:Mm9::chr19:55256373..55256384,+#_e3d22b2f1308549011ceff08869d1682p@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_e3d22b2f1308549011ceff08869d1682p@chr15:103146966..103146971, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_e3d22b2f1308549011ceff08869d1682p2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_e3d22b2f1308549011ceff08869d1682p@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_e3d22b2f1308549011ceff08869d1682p@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr1:60561636..60561645,-#_e3d22b2f1308549011ceff08869d1682p@chr1:60561636..60561645, -
1.87e-86FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_e3d22b2f1308549011ceff08869d1682p@chr11:8405038..8405048, -
1.87e-86FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_e3d22b2f1308549011ceff08869d1682p4@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_e3d22b2f1308549011ceff08869d1682p@chr1:182528371..182528385, +
1.87e-86FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_e3d22b2f1308549011ceff08869d1682p@chr7:141605556..141605563, -
1.87e-86FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_e3d22b2f1308549011ceff08869d1682p@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr5:30710403..30710406,-#_e3d22b2f1308549011ceff08869d1682p10@Otof
1.87e-86FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_e3d22b2f1308549011ceff08869d1682p@chr12:109905468..109905474, +
1.87e-86FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_e3d22b2f1308549011ceff08869d1682p1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_e3d22b2f1308549011ceff08869d1682p@chr2:152453066..152453075, -
1.87e-86FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_e3d22b2f1308549011ceff08869d1682p@chr16:93971325..93971337, -
1.87e-86FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_e3d22b2f1308549011ceff08869d1682p@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_e3d22b2f1308549011ceff08869d1682p@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr1:93235253..93235264,+#_e3d22b2f1308549011ceff08869d1682p@chr1:93235253..93235264, +
1.87e-86FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_e3d22b2f1308549011ceff08869d1682p3@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr8:94180607..94180619,-#_e3d22b2f1308549011ceff08869d1682p@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_e3d22b2f1308549011ceff08869d1682p@chr9:42206730..42206739, -
1.87e-86FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_e3d22b2f1308549011ceff08869d1682p1@Dytn
1.87e-86FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_e3d22b2f1308549011ceff08869d1682p11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr13:78322383..78322395,-#_e3d22b2f1308549011ceff08869d1682p2@uc007rhb.1
1.87e-86FFCP PHASE1:Mm9::chr3:106986057..106986062,+#_e3d22b2f1308549011ceff08869d1682p1@Kcna10
1.87e-86FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_e3d22b2f1308549011ceff08869d1682p@chr16:93971357..93971363, -
1.87e-86FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_e3d22b2f1308549011ceff08869d1682p@chr11:8405038..8405048, -
1.87e-86FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_e3d22b2f1308549011ceff08869d1682p@chr6:86746562..86746579, -
1.87e-86FFCP PHASE1:Mm9::chrX:154140781..154140788,+#_e3d22b2f1308549011ceff08869d1682p@chrX:154140781..154140788, +
1.87e-86FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_e3d22b2f1308549011ceff08869d1682p2@Otol1
1.87e-86FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_e3d22b2f1308549011ceff08869d1682p@chr8:13414289..13414295, +
1.87e-86FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_e3d22b2f1308549011ceff08869d1682p@chr9:66860888..66860899, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_e3d22b2f1308549011ceff08869d1682p@chr2:53464178..53464186, +
1.87e-86FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_e3d22b2f1308549011ceff08869d1682p@chr14:63099970..63099980, -
1.87e-86FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_e3d22b2f1308549011ceff08869d1682p7@Pkn3
1.87e-86FFCP PHASE2:Mm9::chr14:102297747..102297765,+#_e3d22b2f1308549011ceff08869d1682p@chr14:102297747..102297765, +
1.87e-86FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_e3d22b2f1308549011ceff08869d1682p1@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr15:65641741..65641748,+#_e3d22b2f1308549011ceff08869d1682p@chr15:65641741..65641748, +
1.87e-86FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_e3d22b2f1308549011ceff08869d1682p@chr12:109905399..109905416, +
1.87e-86FFCP PHASE2:Mm9::chr7:139597684..139597691,+#_e3d22b2f1308549011ceff08869d1682p@chr7:139597684..139597691, +
1.87e-86FFCP PHASE2:Mm9::chr15:89215319..89215330,+#_e3d22b2f1308549011ceff08869d1682p@chr15:89215319..89215330, +
1.87e-86FFCP PHASE2:Mm9::chr7:109052297..109052300,-#_e3d22b2f1308549011ceff08869d1682p2@Tomt
1.87e-86FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_e3d22b2f1308549011ceff08869d1682p@chr14:47293487..47293493, -
1.87e-86FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_e3d22b2f1308549011ceff08869d1682p@chr12:77084875..77084885, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843885..172843890,-#_e3d22b2f1308549011ceff08869d1682p@chr1:172843885..172843890, -
1.87e-86FFCP PHASE2:Mm9::chr10:97109753..97109764,+#_e3d22b2f1308549011ceff08869d1682p3@Epyc
1.87e-86FFCP PHASE2:Mm9::chr7:27964761..27964768,+#_e3d22b2f1308549011ceff08869d1682p@chr7:27964761..27964768, +
1.87e-86FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_e3d22b2f1308549011ceff08869d1682p3@Strc
1.87e-86FFCP PHASE2:Mm9::chr11:94371127..94371139,-#_e3d22b2f1308549011ceff08869d1682p@chr11:94371127..94371139, -
1.87e-86FFCP PHASE1:Mm9::chr9:42208023..42208043,-#_e3d22b2f1308549011ceff08869d1682p4@Tecta
1.87e-86FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_e3d22b2f1308549011ceff08869d1682p@chr3:154693281..154693317, -
1.87e-86FFCP PHASE1:Mm9::chr2:128881546..128881553,-#_e3d22b2f1308549011ceff08869d1682p@chr2:128881546..128881553, -
1.87e-86FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_e3d22b2f1308549011ceff08869d1682p@chr2:73232344..73232356, -
1.87e-86FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_e3d22b2f1308549011ceff08869d1682p@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_e3d22b2f1308549011ceff08869d1682p@chr12:13508046..13508055, +
1.87e-86FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_e3d22b2f1308549011ceff08869d1682p4@Chrna10
1.87e-86FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_e3d22b2f1308549011ceff08869d1682p@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_e3d22b2f1308549011ceff08869d1682p4@Kncn
1.87e-86FFCP PHASE2:Mm9::chr1:94627290..94627299,-#_e3d22b2f1308549011ceff08869d1682p@chr1:94627290..94627299, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_e3d22b2f1308549011ceff08869d1682p@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_e3d22b2f1308549011ceff08869d1682p@chr13:37195838..37195870, -
1.87e-86FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_e3d22b2f1308549011ceff08869d1682p@chr7:27964761..27964768, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_e3d22b2f1308549011ceff08869d1682p3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_e3d22b2f1308549011ceff08869d1682p@chr9:56208792..56208814, -
1.87e-86FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_e3d22b2f1308549011ceff08869d1682p@chr7:133957514..133957529, +
1.87e-86FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_e3d22b2f1308549011ceff08869d1682p1@Otol1
1.87e-86FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_e3d22b2f1308549011ceff08869d1682p1@Otogl
1.87e-86FFCP PHASE1:Mm9::chr16:45693840..45693856,-#_e3d22b2f1308549011ceff08869d1682p1@Tmprss7
1.87e-86FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_e3d22b2f1308549011ceff08869d1682p@chr5:150945209..150945220, +
1.87e-86FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_e3d22b2f1308549011ceff08869d1682p@chr17:13983198..13983203, +
1.87e-86FFCP PHASE1:Mm9::chr9:41495920..41495928,-#_e3d22b2f1308549011ceff08869d1682p@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_e3d22b2f1308549011ceff08869d1682p@chr2:53464178..53464186, +
1.87e-86FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_e3d22b2f1308549011ceff08869d1682p@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_e3d22b2f1308549011ceff08869d1682p@chr9:42207375..42207384, -
1.87e-86FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_e3d22b2f1308549011ceff08869d1682p@chr6:113251606..113251613, +
1.87e-86FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_e3d22b2f1308549011ceff08869d1682p@chr11:11599532..11599539, -
1.87e-86FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_e3d22b2f1308549011ceff08869d1682p21@Espn
1.87e-86FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_e3d22b2f1308549011ceff08869d1682p@chr19:55256373..55256384, +
1.87e-86FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_e3d22b2f1308549011ceff08869d1682p@chr5:144115382..144115389, +
1.87e-86FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_e3d22b2f1308549011ceff08869d1682p@chr13:58283583..58283607, -
1.87e-86FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_e3d22b2f1308549011ceff08869d1682p@chr1:182528371..182528385, +
1.87e-86FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_e3d22b2f1308549011ceff08869d1682p@chr11:4689837..4689845, -
1.87e-86FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_e3d22b2f1308549011ceff08869d1682p@chr17:27252925..27252939, +
1.87e-86FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_e3d22b2f1308549011ceff08869d1682p@chr6:113251614..113251623, +
1.87e-86FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_e3d22b2f1308549011ceff08869d1682p@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_e3d22b2f1308549011ceff08869d1682p@chr3:154459231..154459240, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_e3d22b2f1308549011ceff08869d1682p1@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_e3d22b2f1308549011ceff08869d1682p@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_e3d22b2f1308549011ceff08869d1682p41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_e3d22b2f1308549011ceff08869d1682p1@Otogl
1.87e-86FFCP PHASE1:Mm9::chr3:35012397..35012405,+#_e3d22b2f1308549011ceff08869d1682p@chr3:35012397..35012405, +
1.87e-86FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_e3d22b2f1308549011ceff08869d1682p@chr17:27252925..27252939, +
1.87e-86FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_e3d22b2f1308549011ceff08869d1682p@chr12:13572961..13572974, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_e3d22b2f1308549011ceff08869d1682p@chr17:13983160..13983167, +

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