User:Jessica Severin/Books/ZENBU - complete

an omics data collaboration, data processing and visualization system

 * ZENBU Introduction
 * Main Page


 * ZENBU Genome Browser (gLyphs)
 * ZENBU gLyphs genome browser
 * Track visualization styles
 * Configuring Tracks
 * Data Download
 * TrackCaching System
 * Region Location


 * Concepts
 * ZENBU Configurations
 * Data Sources
 * Data Stream Pool
 * Data Abstraction Model


 * Data Explorer interface
 * Data Explorer Interface
 * Metadata searching
 * Metadata editing


 * User Collaborations
 * Secured user profiles
 * Data sharing collaborations


 * Data Uploading
 * Data loading
 * BAM and SAM file support
 * BED file support
 * GFF and GTF file support
 * OSCtable


 * Data Stream Processing
 * Data Stream Processing


 * Processing modules
 * Proxy
 * FeatureEmitter
 * TemplateCluster
 * UniqueFeature
 * Paraclu
 * TemplateFilter
 * CutoffFilter
 * ExpressionDatatypeFilter
 * FeatureLengthFilter
 * TopHits
 * NeighborCutoff
 * NormalizeByFactor
 * NormalizePerMillion
 * NormalizeRPKM
 * RescalePseudoLog
 * CalcFeatureSignificance
 * CalcInterSubfeatures
 * StreamSubfeatures
 * FilterSubfeatures
 * ResizeFeatures
 * MakeStrandless
 * RenameExperiments
 * FeatureRename