CAGE Basic Viewer  CAGE Basic Viewer   for  Homo sapiens
Friday, 26 April 2024 
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Library Summary
CAGE Library ID : H39BA
Linker Method Primer Type Mixed Clones Tags Tags/clone Mapped
tags (rate)
Unmapped tags CTSSs TCs TUs
No hit (rate) Multiple (rate)
Monomer random Yes 33,115 361,523 10.92 238,159 (66%) 80,058 (22%) 43,306 (12%) 101,296 51,860 18,753
RNA Libraries
RNA Lib. ID Tissue Type Stage Tags Mapped
tags (rate)
CTSSs TCs TUs
-1 N/A.  -1 (N/A.) 287 101 (35%)97 95 95
HAD small intestine  -1 (N/A.) 81,918 52,158 (64%)30,534 17,732 10,536
HAE rectum  -1 (N/A.) 12,936 7,784 (60%)5,616 4,154 3,435
HAF rectum  -1 (N/A.) 30,448 18,549 (61%)12,264 8,165 5,965
HAG cecum  -1 (N/A.) 213,515 147,201 (69%)65,094 32,636 15,012
HAH cecum  -1 (N/A.) 22,419 12,366 (55%)8,784 6,141 4,748
Detail of Summary in : » chr_no  » plate_id  
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