Referring to the database

Currently, we provide CGIs for linking to the database with the following IDs

If you would like to link the database, you should use the following URLs in your documents.


Clone ID (cloneid)

https://fantom.gsc.riken.jp/3/db/link/cloneid.cgi?id=(Clone ID)
Example: https://fantom.gsc.riken.jp/3/db/link/cloneid.cgi?id=1

(FANTOM 3) Sequence ID (seqid)

https://fantom.gsc.riken.jp/3/db/link/seqid.cgi?id=((FANTOM 3) Sequence ID)
Example: https://fantom.gsc.riken.jp/3/db/link/seqid.cgi?id=1

Rearray ID (rearrayid)

https://fantom.gsc.riken.jp/3/db/link/rearrayid.cgi?id=(Rearray ID)
Example: https://fantom.gsc.riken.jp/3/db/link/rearrayid.cgi?id=1

DDBJ Accession in HTC (accession)

https://fantom.gsc.riken.jp/3/db/link/accession.cgi?id=(DDBJ Accession in HTC )
Example: https://fantom.gsc.riken.jp/3/db/link/accession.cgi?id=1

DDBJ Accessions in EST (estaccession)

https://fantom.gsc.riken.jp/3/db/link/estaccession.cgi?id=(DDBJ Accessions in EST)
Example: https://fantom.gsc.riken.jp/3/db/link/estaccession.cgi?id=1

(FANTOM 2) Sequence ID (f2seqid)

https://fantom.gsc.riken.jp/3/db/link/f2seqid.cgi?id=((FANTOM 2) Sequence ID)
Example: https://fantom.gsc.riken.jp/3/db/link/f2seqid.cgi?id=1

(FANTOM 1) Sequence ID (f1seqid)

https://fantom.gsc.riken.jp/3/db/link/f1seqid.cgi?id=((FANTOM 1) Sequence ID)
Example: https://fantom.gsc.riken.jp/3/db/link/f1seqid.cgi?id=1

MGI Clone Accession (mgiclone)

https://fantom.gsc.riken.jp/3/db/link/mgiclone.cgi?id=(MGI Clone Accession)
Example: https://fantom.gsc.riken.jp/3/db/link/mgiclone.cgi?id=1

MGI Marker Accession (mgimarker)

https://fantom.gsc.riken.jp/3/db/link/mgimarker.cgi?id=(MGI Marker Accession)
Example: https://fantom.gsc.riken.jp/3/db/link/mgimarker.cgi?id=1

Any ID type

https://fantom.gsc.riken.jp/3/db/link/id.cgi?id=(any ID)
Example: https://fantom.gsc.riken.jp/3/db/link/id.cgi?id=747 BY712142

Multiple identifiers

You can write multiple identifiers in an "id" parameter by concatenating with comma characters.
https://fantom.gsc.riken.jp/3/db/link/id.cgi?id=747 BY712142,4921505D17

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RIKEN (The Institute of Physical and Chemical Research) / NTT Software Corporation.