Source Name Comment [rna_tube] Comment [sample_name] Comment [organism] Comment [barcode] Protocol REF Parameter [rna_extraction] Extract Name Comment [rna_id] Comment [Material Type] Comment [comment_on_rna] Protocol REF Comment [lsid] Parameter [library_protocol] Library Name Comment [library_id] Protocol REF Parameter [sequence_protocol] Parameter [machine_name] Parameter [run_name] Parameter [flowcell.channel] File Name Comment [sequence_raw_file] Protocol REF Parameter [sex] File Name 10004-101A9 10004-101A9 chicken embryo whole body, day10 (HH37) Gallus gallus GGCTAC standard whole cell standard whole cell 10004-101A9.rna 10004-101A9.rna total RNA comment:Sample category:"FANTOM5 tissue"; company:"NA"; RNA lot number:"NA"; RNA Catalog number:"NA"; donor(cell lot):"1";; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:9.6; A260A280:1.81; A260A230:1.81 OP-SOLEXA-shortRNA-TruSeq-v2.0 1102 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10006 SRhi10006 OP-HiSeq2000-sequencing-cBot-v2.5 OP-HiSeq2000-sequencing-cBot-v2.5 NA NA NA /sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/ /sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/ bwa_aln unknown_sex_type chicken%20embryo%20whole%20body%2c%20day10%20%28HH37%29.SRhi10006.10004-101A9.galGal5.GGCTAC.bam 10004-101A9 10004-101A9 chicken embryo whole body, day10 (HH37) Gallus gallus GGTAGC standard whole cell standard whole cell 10004-101A9.rna 10004-101A9.rna total RNA comment:Sample category:"FANTOM5 tissue"; company:"NA"; RNA lot number:"NA"; RNA Catalog number:"NA"; donor(cell lot):"1";; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:9.6; A260A280:1.81; A260A230:1.81 OP-SOLEXA-shortRNA-TruSeq-v2.0 1103 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10007 SRhi10007 OP-HiSeq2000-sequencing-cBot-v2.5 OP-HiSeq2000-sequencing-cBot-v2.5 NA NA NA /sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/ /sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/ bwa_aln unknown_sex_type chicken%20embryo%20whole%20body%2c%20day10%20%28HH37%29.SRhi10007.10004-101A9.galGal5.GGTAGC.bam