Source Name Comment [rna_tube] Comment [sample_name] Comment [organism] Comment [barcode] Protocol REF Parameter [rna_extraction] Extract Name Comment [rna_id] Comment [Material Type] Comment [comment_on_rna] Protocol REF Comment [lsid] Parameter [library_protocol] Library Name Comment [library_id] Protocol REF Parameter [sequence_protocol] Parameter [machine_name] Parameter [run_name] Parameter [flowcell.channel] File Name Comment [sequence_raw_file] Protocol REF Parameter [sex] File Name 11297-117B1 11297-117B1 Canine Aortic Smooth Muscle cells, donor1 Canis lupus familiaris CGATGT standard whole cell standard whole cell 11297-117B1.rna 11297-117B1.rna total RNA comment:Sample category:"FANTOM5 update November1"; company:"Cell Applications"; cell lot:"lot:1261";cell catalog:"CACn35405";; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:9.2; A260A280:2.06; A260A230:1.57 OP-SOLEXA-shortRNA-TruSeq-v2.0 1102 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10006 SRhi10006 OP-HiSeq2000-sequencing-cBot-v2.5 OP-HiSeq2000-sequencing-cBot-v2.5 NA NA NA /sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/ /sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/ bwa_aln unknown_sex_type Canine%20Aortic%20Smooth%20Muscle%20cells%2c%20donor1.SRhi10006.11297-117B1.canFam3.CGATGT.bam 11374-118A6 11374-118A6 Canine Aortic Smooth Muscle cells, donor2 Canis lupus familiaris GGCTAC standard whole cell standard whole cell 11374-118A6.rna 11374-118A6.rna total RNA comment:Sample category:"FANTOM5 snapshot"; company:"Cell Applications"; cell lot:"lot:1498"; cell catalog:"CACn35405"; RNA lot number:""; RNA Catalog number:"N/A"; donor(cell lot):""; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:9.9; A260A280:2.04; A260A230:2.02 OP-SOLEXA-shortRNA-TruSeq-v2.0 1106 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10010 SRhi10010 OP-HiSeq2000-sequencing-cBot-v2.5 OP-HiSeq2000-sequencing-cBot-v2.5 NA NA NA /sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/ /sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/ bwa_aln unknown_sex_type Canine%20Aortic%20Smooth%20Muscle%20cells%2c%20donor2.SRhi10010.11374-118A6.canFam3.GGCTAC.bam 11446-118I6 11446-118I6 Canine Aortic Smooth Muscle cells, donor3 Canis lupus familiaris GTCCGC standard whole cell standard whole cell 11446-118I6.rna 11446-118I6.rna total RNA comment:Sample category:"FANTOM5 snapshot"; company:"Cell Applications"; cell lot:"lot:2033"; cell catalog:"CACn35405"; RNA lot number:""; RNA Catalog number:"N/A"; donor(cell lot):""; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:10; A260A280:2.05; A260A230:1.74 OP-SOLEXA-shortRNA-TruSeq-v2.0 1110 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10014 SRhi10014 OP-HiSeq2000-sequencing-cBot-v2.5 OP-HiSeq2000-sequencing-cBot-v2.5 NA NA NA /sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/ /sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/ bwa_aln unknown_sex_type Canine%20Aortic%20Smooth%20Muscle%20cells%2c%20donor3.SRhi10014.11446-118I6.canFam3.GTCCGC.bam