NCig10023.R1 exon 506845 NCig10023.R1 extracted 3551742 NCig10023.R1 filtered_for_artefacts 3525942 NCig10023.R1 filtered_for_rrna 3058026 NCig10023.R1 genome_mapped 2976638 NCig10023.R1 intergenic 1320993 NCig10023.R1 promoter 224651 NCig10023.R1 properly_mapped 2742745 NCig10023.R1 raw 4512027 NCig10023.R1 removed_artefacts 25800 NCig10023.R1 removed_by_alignment 81388 NCig10023.R1 removed_by_extraction 960285 NCig10023.R1 removed_duplicates 768278 NCig10023.R1 removed_improper_pairs 534385 NCig10023.R1 removed_rrna 467916 NCig10023.R1 total_CAGEscan_pairs 2052489 NCig10023.R1 uniquely_mapped 2208360