NCig10041.R1 exon 835546 NCig10041.R1 extracted 9743012 NCig10041.R1 filtered_for_artefacts 9500867 NCig10041.R1 filtered_for_rrna 5550388 NCig10041.R1 genome_mapped 5359597 NCig10041.R1 intergenic 1756556 NCig10041.R1 promoter 561795 NCig10041.R1 properly_mapped 5074872 NCig10041.R1 raw 10775321 NCig10041.R1 removed_artefacts 242145 NCig10041.R1 removed_by_alignment 190791 NCig10041.R1 removed_by_extraction 1032309 NCig10041.R1 removed_duplicates 1951338 NCig10041.R1 removed_improper_pairs 1666613 NCig10041.R1 removed_rrna 3950479 NCig10041.R1 total_CAGEscan_pairs 3153897 NCig10041.R1 uniquely_mapped 3408259