2013-07-14 Marina Lizio (marina.lizio@riken.jp) Inquiries to fantom-help@gsc.riken.jp or to data analysis provider, when available. Phase1.1 contributing analyses folders. This directory contains essentially same data as Phase1.0. for details on content, see ../phase1.0/00_readme.txt ChangeLog 2013-02-07 *CAGE_peaks/hg19_cage_peaks*.gz have been updated from their original version. A label swap was found in the header section (CNhs12996 -temporal lobe tech_rep2- and CNhs12997 -duodenum failed to be lastly updated). *Whole_genome_CTSS directory was added. It contains, per genome, whole genome CTSS and TSS expression. 2014-02-21 Additional analysis results for human and mouse data is available. *Sample_ontology_enrichment_of_CAGE_peaks contains enriched ontology terms for each sample. *Sample_ontology_enrichment_of_coexpression clusters contains enriched ontology terms for each coexpression cluster. *Repeat_expression contains relative expression of repeats-based CAGE peaks. *Transcription_factors contains data on TF analyses. 2014-05-02 DRA accessions available. *DRA_accession_tables 2014-07-14 Additional cross-species analysis available in directory *CAGE_peaks_Cross_species_projection