Extract Name Comment [rna_tube] Comment [sample_name] Comment [organism] Protocol REF Parameter [rna_extraction] Extract Name Comment [rna_id] Comment [Material Type] Comment [ratio 260/280] Comment [ratio 260/230] Comment [concentration] Comment [RNA integrity number] Protocol REF Comment [lsid] Parameter [library_protocol] Library Name Comment [library_id] Protocol REF Parameter [sequence_protocol] Parameter [machine_name] Parameter [run_name] Parameter [flowcell.channel] File Name Comment [sequence_raw_file] Protocol REF Parameter [sex] File Name 11377-118A9 11377-118A9 Rat Aortic Smooth Muscle cells, donor2 Rattus norvegicus standard whole cell standard whole cell 11377-118A9.rna 11377-118A9.rna total RNA 1.95,1.96,2.06 2.42,2.46,2.4 38.46,38.9,38.32 10 OP-HELISCOPE-CAGE-v3.12 767 OP-HELISCOPE-CAGE-v3.12 CNhs11307 CNhs11307 OP-HELISCOPE-sequencing-v1.0 OP-HELISCOPE-sequencing-v1.0 NA NA fc1.ch24 /sequencedata/heliscope/srf/2010_12_02_R2_30Q_1100FOV /sequencedata/heliscope/srf/2010_12_02_R2_30Q_1100FOV delve_align female Rat%20Aortic%20Smooth%20Muscle%20cells%2c%20donor2.CNhs11307.11377-118A9.rn6.nobarcode.bam 11444-118I4 11444-118I4 Rat hepatocytes, donor3 Rattus norvegicus standard whole cell standard whole cell 11444-118I4.rna 11444-118I4.rna total RNA 2.02,2.01,2.02 1.08,1.09,1.09 57.39,57.4,56.25 8 OP-HELISCOPE-CAGE-v3.12 767 OP-HELISCOPE-CAGE-v3.12 CNhs11312 CNhs11312 OP-HELISCOPE-sequencing-v1.0 OP-HELISCOPE-sequencing-v1.0 NA NA fc1.ch09 /sequencedata/heliscope/srf/2010_12_02_R2_30Q_1100FOV /sequencedata/heliscope/srf/2010_12_02_R2_30Q_1100FOV delve_align male Rat%20hepatocytes%2c%20donor3.CNhs11312.11444-118I4.rn6.nobarcode.bam 11445-118I5 11445-118I5 Rat Mesenchymal stem cells - bone marrow derived, donor3 Rattus norvegicus standard whole cell standard whole cell 11445-118I5.rna 11445-118I5.rna total RNA 2.27,2.11,2.18 2.75,2.8,2.82 58.3,58.1,57.83 9.1 OP-HELISCOPE-CAGE-v3.12 767 OP-HELISCOPE-CAGE-v3.12 CNhs11313 CNhs11313 OP-HELISCOPE-sequencing-v1.0 OP-HELISCOPE-sequencing-v1.0 NA NA fc1.ch06 /sequencedata/heliscope/srf/2010_12_02_R2_30Q_1100FOV /sequencedata/heliscope/srf/2010_12_02_R2_30Q_1100FOV delve_align female Rat%20Mesenchymal%20stem%20cells%20-%20bone%20marrow%20derived%2c%20donor3.CNhs11313.11445-118I5.rn6.nobarcode.bam 11449-118I9 11449-118I9 Rat Aortic Smooth Muscle cells, donor3 Rattus norvegicus standard whole cell standard whole cell 11449-118I9.rna 11449-118I9.rna total RNA 2.14,2.16,1.99 2.26,2.16,2.32 51.87,52.75,52.42 9.5 OP-HELISCOPE-CAGE-v3.12 767 OP-HELISCOPE-CAGE-v3.12 CNhs11315 CNhs11315 OP-HELISCOPE-sequencing-v1.0 OP-HELISCOPE-sequencing-v1.0 NA NA fc2.ch22 /sequencedata/heliscope/srf/2010_12_02_R2_30Q_1100FOV /sequencedata/heliscope/srf/2010_12_02_R2_30Q_1100FOV delve_align male Rat%20Aortic%20Smooth%20Muscle%20cells%2c%20donor3.CNhs11315.11449-118I9.rn6.nobarcode.bam 11481-119D5 11481-119D5 Rat Aortic Smooth Muscle cells - differentiated, donor1 Rattus norvegicus standard whole cell standard whole cell 11481-119D5.rna 11481-119D5.rna total RNA 2.11,2.13,2.15 2.31,2.3,2.2 30.24,30.01,31.2 - OP-HELISCOPE-CAGE-v4.0 838 OP-HELISCOPE-CAGE-v4.0 CNhs12070 CNhs12070 OP-HELISCOPE-sequencing-v1.0 OP-HELISCOPE-sequencing-v1.0 NA NA fc2.ch01 /sequencedata/heliscope/srf/2011_1_28_Riken_Run6_30Q_1100FOV /sequencedata/heliscope/srf/2011_1_28_Riken_Run6_30Q_1100FOV delve_align unknown_sex_type Rat%20Aortic%20Smooth%20Muscle%20cells%20-%20differentiated%2c%20donor1.CNhs12070.11481-119D5.rn6.nobarcode.bam 11482-119D6 11482-119D6 Rat Aortic Smooth Muscle cells - differentiated, donor2 Rattus norvegicus standard whole cell standard whole cell 11482-119D6.rna 11482-119D6.rna total RNA 2.02,2.08,2.13 2.4,2.34,2.44 65.82,66.88,64.91 - OP-HELISCOPE-CAGE-v4.0 838 OP-HELISCOPE-CAGE-v4.0 CNhs12071 CNhs12071 OP-HELISCOPE-sequencing-v1.0 OP-HELISCOPE-sequencing-v1.0 NA NA fc2.ch23 /sequencedata/heliscope/srf/2011_1_28_Riken_Run6_30Q_1100FOV /sequencedata/heliscope/srf/2011_1_28_Riken_Run6_30Q_1100FOV delve_align female Rat%20Aortic%20Smooth%20Muscle%20cells%20-%20differentiated%2c%20donor2.CNhs12071.11482-119D6.rn6.nobarcode.bam 11483-119D7 11483-119D7 Rat Aortic Smooth Muscle cells - differentiated, donor3 Rattus norvegicus standard whole cell standard whole cell 11483-119D7.rna 11483-119D7.rna total RNA 2.07,2.08,2.08 2.33,2.33,2.33 68,68.15,68.04 - OP-HELISCOPE-CAGE-v4.0 838 OP-HELISCOPE-CAGE-v4.0 CNhs12072 CNhs12072 OP-HELISCOPE-sequencing-v1.0 OP-HELISCOPE-sequencing-v1.0 NA NA fc2.ch20 /sequencedata/heliscope/srf/2011_1_28_Riken_Run6_30Q_1100FOV /sequencedata/heliscope/srf/2011_1_28_Riken_Run6_30Q_1100FOV delve_align male Rat%20Aortic%20Smooth%20Muscle%20cells%20-%20differentiated%2c%20donor3.CNhs12072.11483-119D7.rn6.nobarcode.bam 11373-118A5 11373-118A5 Rat Mesenchymal stem cells - bone marrow derived, donor2 Rattus norvegicus standard whole cell standard whole cell 11373-118A5.rna 11373-118A5.rna total RNA - - - - OP-HELISCOPE-CAGE-v3.12 905 OP-HELISCOPE-CAGE-v3.12 CNhs11301 CNhs11301 OP-HELISCOPE-sequencing-v1.0 OP-HELISCOPE-sequencing-v1.0 NA NA fc1.ch17 /sequencedata/heliscope/srf/2010_12_02_R2_30Q_1100FOV /sequencedata/heliscope/srf/2010_12_02_R2_30Q_1100FOV delve_align female Rat%20Mesenchymal%20stem%20cells%20-%20bone%20marrow%20derived%2c%20donor2.CNhs11301.11373-118A5.rn6.nobarcode.bam 11372-118A4 11372-118A4 Rat hepatocytes, donor2 Rattus norvegicus standard whole cell standard whole cell 11372-118A4.rna 11372-118A4.rna total RNA - - - - OP-HELISCOPE-CAGE-v3.12 905 OP-HELISCOPE-CAGE-v3.12 CNhs11302 CNhs11302 OP-HELISCOPE-sequencing-v1.0 OP-HELISCOPE-sequencing-v1.0 NA NA fc1.ch14 /sequencedata/heliscope/srf/2010_12_02_R2_30Q_1100FOV /sequencedata/heliscope/srf/2010_12_02_R2_30Q_1100FOV delve_align male Rat%20hepatocytes%2c%20donor2.CNhs11302.11372-118A4.rn6.nobarcode.bam 11295-117A8 11295-117A8 Rat hepatocytes, donor1 Rattus norvegicus standard whole cell standard whole cell 11295-117A8.rna 11295-117A8.rna total RNA - - - - OP-HELISCOPE-CAGE-v3.12 905 OP-HELISCOPE-CAGE-v3.12 CNhs11293 CNhs11293 OP-HELISCOPE-sequencing-v1.0 OP-HELISCOPE-sequencing-v1.0 NA NA fc1.ch16 /sequencedata/heliscope/srf/2010_12_02_R2_30Q_1100FOV /sequencedata/heliscope/srf/2010_12_02_R2_30Q_1100FOV delve_align male Rat%20hepatocytes%2c%20donor1.CNhs11293.11295-117A8.rn6.nobarcode.bam 11296-117A9 11296-117A9 Rat Mesenchymal stem cells - bone marrow derived, donor1 Rattus norvegicus standard whole cell standard whole cell 11296-117A9.rna 11296-117A9.rna total RNA - - - - OP-HELISCOPE-CAGE-v3.12 905 OP-HELISCOPE-CAGE-v3.12 CNhs11295 CNhs11295 OP-HELISCOPE-sequencing-v1.0 OP-HELISCOPE-sequencing-v1.0 NA NA fc1.ch10 /sequencedata/heliscope/srf/2010_12_02_R2_30Q_1100FOV /sequencedata/heliscope/srf/2010_12_02_R2_30Q_1100FOV delve_align female Rat%20Mesenchymal%20stem%20cells%20-%20bone%20marrow%20derived%2c%20donor1.CNhs11295.11296-117A9.rn6.nobarcode.bam 11300-117B4 11300-117B4 Rat Aortic Smooth Muscle cells, donor1 Rattus norvegicus standard whole cell standard whole cell 11300-117B4.rna 11300-117B4.rna total RNA - - - - OP-HELISCOPE-CAGE-v3.12 905 OP-HELISCOPE-CAGE-v3.12 CNhs11298 CNhs11298 OP-HELISCOPE-sequencing-v1.0 OP-HELISCOPE-sequencing-v1.0 NA NA fc1.ch01 /sequencedata/heliscope/srf/2010_12_02_R2_30Q_1100FOV /sequencedata/heliscope/srf/2010_12_02_R2_30Q_1100FOV delve_align unknown_sex_type Rat%20Aortic%20Smooth%20Muscle%20cells%2c%20donor1.CNhs11298.11300-117B4.rn6.nobarcode.bam