Personal tools

MacroAPE 1083:CNhs12494 bu f1

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: CNhs12494_bu_f1

Motif matrix
POACGT
1116.5221527777748240.15668832406321366.94636838343126308.3747905147294
236.3673761580097471.08811062655623488.5418554141906236.00265780124212
342.5544983295878829.539549207275943408.69030097157736351.2156514915572
4127.4879349647337125.969407964573264448.0715246712443230.47113239944724
520.0381858345631376.166856285704672172.61946642200897633.1754914577214
625.10715569243214453.49301098863215750.82085403482112.578979284112927
7775.50402646619365.06171430389895729.8407003687000521.593558861205384
88.60959447487758712.253101801532507805.62136008007525.515943643512845
9568.531239727732347.56301776101361147.6944104295048468.2113320817476
10130.1672439166084479.8922930440264282.8343705230841539.1060925162798
1151.128682293142035336.90433019854805165.6238385416661278.3431489666428
12319.031230549881577.5827605203056491.73009505013505343.65591387967623

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

Pax4#MA0068.100.004451352.11884112GGGGTGAGATCTGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
GAT3#MA0301.1-30.004610432.1945619GGGGTGAGATCTTGTAGATCT-
ECM23#MA0293.1-30.00478332.2768519GGGGTGAGATCTTTTAGATCTTT-
SRD1#MA0389.1-40.007259263.4554118GGGGTGAGATCTGTAGATCT-
GAT4#MA0302.1-30.009871984.6990619GGGGTGAGATCTTTTAGATCTTT-
CREB1#MA0018.110.01079115.13658111GGGGTGAGATCTCCTGGTGACGTC+
Tal1::Gata1#MA0140.150.01133825.39698112GGGGTGAGATCTCTGGTGGGGACAGATAAG+
RUNX1#MA0002.2-10.01937529.2226111GGGGTGAGATCTGTCTGTGGTTT+