Personal tools

CL:0000098: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{CL |id=CL:0000098 |name=sensory epithelial cell |namespace=cell |def="A specialized epithelial cell involved in sensory perception. Restricted to special sense organs of...")
 
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{CL
{{CL
|id=CL:0000098
|alt_id=
|name=sensory epithelial cell
|namespace=cell
|def="A specialized epithelial cell involved in sensory perception. Restricted to special sense organs of the olfactory, gustatory, and vestibulocochlear receptor systems; contain sensory cells surrounded by supportive, non-receptive cells." [GOC:tfm, ISBN:0517223651, ISBN:0721662544]
|xref=BTO:0004301
|is_a=CL:0000066;;CL:0000197;;CL:0002371
|synonym="neuroepithelial cell" BROAD []
|comment=The term "neuroepithelial cell" is used to describe both this cell type and neurecto-epithelial cell (CL:0000710).
|comment=The term "neuroepithelial cell" is used to describe both this cell type and neurecto-epithelial cell (CL:0000710).
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A specialized epithelial cell involved in sensory perception. Restricted to special sense organs of the olfactory, gustatory, and vestibulocochlear receptor systems; contain sensory cells surrounded by supportive, non-receptive cells." [GOC:tfm, ISBN:0517223651, ISBN:0721662544]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000098
|is_a=CL:0000066 ;;CL:0000197 ;;CL:0002371
|is_obsolete=
|located_in=
|located_in=
|name=sensory epithelial cell
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|subset=
|synonym="neuroepithelial cell" BROAD []
|union_of=
|xref=BTO:0004301
}}
}}

Latest revision as of 16:29, 12 September 2014

Name:sensory epithelial cell
Namespace:FANTOM
Definition:"A specialized epithelial cell involved in sensory perception. Restricted to special sense organs of the olfactory, gustatory, and vestibulocochlear receptor systems; contain sensory cells surrounded by supportive, non-receptive cells." [GOC:tfm, ISBN:0517223651, ISBN:0721662544]
Xrefs:
links:
BTO:0004301
Synonyms: "neuroepithelial cell" BROAD []
Comments:The term "neuroepithelial cell" is used to describe both this cell type and neurecto-epithelial cell (CL:0000710).


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000066(epithelial cell),CL:0000197(receptor cell),CL:0002371(somatic cell)



Children


is a:CL:0002167 (olfactory epithelial cell),CL:0002491 (auditory epithelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 11933-125I7 (Olfactory epithelial cells, donor1)
  • 11934-125I8 (Olfactory epithelial cells, donor2)
  • 11935-125I9 (Olfactory epithelial cells, donor3)
  • 11936-126A1 (Olfactory epithelial cells, donor4)
  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

... further results Mouse (Mus musculus)

  • 11933-125I7 (Olfactory epithelial cells, donor1)
  • 11934-125I8 (Olfactory epithelial cells, donor2)
  • 11935-125I9 (Olfactory epithelial cells, donor3)
  • 11936-126A1 (Olfactory epithelial cells, donor4)
  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000098 (sensory epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.07e-130FFCP PHASE1:Hg19::chr1:110662969..110662978,+#_7a20945a5becb8ec7b9a5285468df4b6p@chr1:110662969..110662978, +
1.07e-130FFCP PHASE2:Hg19::chr1:110662969..110662978,+#_7a20945a5becb8ec7b9a5285468df4b6p@chr1:110662969..110662978, +
5.17e-105FFCP PHASE1:Hg19::chrX:69308592..69308633,+#_4915413c6f477310424a7e40a9f01812p@chrX:69308592..69308633, +
5.17e-105FFCP PHASE2:Hg19::chrX:69308592..69308633,+#_4915413c6f477310424a7e40a9f01812p@chrX:69308592..69308633, +
7.0e-88FFCP PHASE1:Hg19::chr1:110662936..110662945,+#_4e5930065b86cd87bf2536282550b85cp@chr1:110662936..110662945, +
7.0e-88FFCP PHASE2:Hg19::chr1:110662936..110662945,+#_4e5930065b86cd87bf2536282550b85cp@chr1:110662936..110662945, +
8.76e-88FFCP PHASE1:Hg19::chr2:228246460..228246471,-#_6aa9f90330c4b3a6b6ea3cc80a94db67p4@TM4SF20
8.76e-88FFCP PHASE2:Hg19::chr2:228246460..228246471,-#_6aa9f90330c4b3a6b6ea3cc80a94db67p4@TM4SF20
1.87e-86FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_d8ca278727e4dca4986149be2999763cp@chr14:20649897..20649907, +
1.87e-86FFCP PHASE2:Mm9::chr14:63099970..63099980,-#_d8ca278727e4dca4986149be2999763cp@chr14:63099970..63099980, -
1.87e-86FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_d8ca278727e4dca4986149be2999763cp1@Strc
1.87e-86FFCP PHASE1:Mm9::chr9:42208142..42208157,-#_d8ca278727e4dca4986149be2999763cp10@Tecta
1.87e-86FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_d8ca278727e4dca4986149be2999763cp2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_d8ca278727e4dca4986149be2999763cp@chr6:29428397..29428407, -
1.87e-86FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_d8ca278727e4dca4986149be2999763cp@chr15:89215333..89215341, +
1.87e-86FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_d8ca278727e4dca4986149be2999763cp1@Strc
1.87e-86FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_d8ca278727e4dca4986149be2999763cp@chr15:58022966..58022995, -
1.87e-86FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_d8ca278727e4dca4986149be2999763cp@chr15:97806034..97806061, +
1.87e-86FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_d8ca278727e4dca4986149be2999763cp@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_d8ca278727e4dca4986149be2999763cp@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_d8ca278727e4dca4986149be2999763cp3@Kncn
1.87e-86FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_d8ca278727e4dca4986149be2999763cp1@Tmprss7
1.87e-86FFCP PHASE1:Mm9::chr9:42207777..42207789,-#_d8ca278727e4dca4986149be2999763cp7@Tecta
1.87e-86FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_d8ca278727e4dca4986149be2999763cp@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_d8ca278727e4dca4986149be2999763cp@chr10:67371994..67372010, +
1.87e-86FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_d8ca278727e4dca4986149be2999763cp@chr9:42206730..42206739, -
1.87e-86FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_d8ca278727e4dca4986149be2999763cp@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_d8ca278727e4dca4986149be2999763cp@chr17:13983095..13983100, +
1.87e-86FFCP PHASE1:Mm9::chr13:43699228..43699239,+#_d8ca278727e4dca4986149be2999763cp@chr13:43699228..43699239, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_d8ca278727e4dca4986149be2999763cp2@Tectb
1.87e-86FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_d8ca278727e4dca4986149be2999763cp6@Fam70b
1.87e-86FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_d8ca278727e4dca4986149be2999763cp12@B3galt5
1.87e-86FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_d8ca278727e4dca4986149be2999763cp@chr5:150945209..150945220, +
1.87e-86FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_d8ca278727e4dca4986149be2999763cp@chr12:109905399..109905416, +
1.87e-86FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_d8ca278727e4dca4986149be2999763cp@chr11:4689776..4689785, -
1.87e-86FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_d8ca278727e4dca4986149be2999763cp@chr4:154208086..154208123, +
1.87e-86FFCP PHASE1:Mm9::chr9:41495920..41495928,-#_d8ca278727e4dca4986149be2999763cp@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_d8ca278727e4dca4986149be2999763cp@chr2:53464178..53464186, +
1.87e-86FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_d8ca278727e4dca4986149be2999763cp@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_d8ca278727e4dca4986149be2999763cp@chr6:113251614..113251623, +
1.87e-86FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_d8ca278727e4dca4986149be2999763cp@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_d8ca278727e4dca4986149be2999763cp@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_d8ca278727e4dca4986149be2999763cp@chr13:48087761..48087775, -
1.87e-86FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_d8ca278727e4dca4986149be2999763cp2@Otol1
1.87e-86FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_d8ca278727e4dca4986149be2999763cp@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_d8ca278727e4dca4986149be2999763cp@chr11:11599532..11599539, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_d8ca278727e4dca4986149be2999763cp2@Otogl
1.87e-86FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_d8ca278727e4dca4986149be2999763cp@chr4:101908153..101908163, +
1.87e-86FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_d8ca278727e4dca4986149be2999763cp@chr14:31283085..31283097, -
1.87e-86FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_d8ca278727e4dca4986149be2999763cp@chr18:38104702..38104718, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_d8ca278727e4dca4986149be2999763cp@chr6:113251614..113251623, +
1.87e-86FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_d8ca278727e4dca4986149be2999763cp1@Dytn
1.87e-86FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_d8ca278727e4dca4986149be2999763cp@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr9:42208023..42208043,-#_d8ca278727e4dca4986149be2999763cp4@Tecta
1.87e-86FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_d8ca278727e4dca4986149be2999763cp1@Dytn
1.87e-86FFCP PHASE1:Mm9::chr13:78322370..78322376,-#_d8ca278727e4dca4986149be2999763cp4@uc007rhb.1
1.87e-86FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_d8ca278727e4dca4986149be2999763cp1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_d8ca278727e4dca4986149be2999763cp2@Otol1
1.87e-86FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_d8ca278727e4dca4986149be2999763cp3@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_d8ca278727e4dca4986149be2999763cp1@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_d8ca278727e4dca4986149be2999763cp5@Tecta
1.87e-86FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_d8ca278727e4dca4986149be2999763cp@chr13:78257518..78257522, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207697..42207705,-#_d8ca278727e4dca4986149be2999763cp@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr3:106986057..106986062,+#_d8ca278727e4dca4986149be2999763cp1@Kcna10
1.87e-86FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_d8ca278727e4dca4986149be2999763cp@chr13:58283583..58283607, -
1.87e-86FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_d8ca278727e4dca4986149be2999763cp@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_d8ca278727e4dca4986149be2999763cp@chr1:93235228..93235249, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_d8ca278727e4dca4986149be2999763cp3@Otogl
1.87e-86FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_d8ca278727e4dca4986149be2999763cp7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_d8ca278727e4dca4986149be2999763cp@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_d8ca278727e4dca4986149be2999763cp1@Grxcr1
1.87e-86FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_d8ca278727e4dca4986149be2999763cp@chr10:108316802..108316807, -
1.87e-86FFCP PHASE1:Mm9::chr5:30710403..30710406,-#_d8ca278727e4dca4986149be2999763cp10@Otof
1.87e-86FFCP PHASE1:Mm9::chr1:172843885..172843890,-#_d8ca278727e4dca4986149be2999763cp@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_d8ca278727e4dca4986149be2999763cp@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_d8ca278727e4dca4986149be2999763cp@chr9:50968647..50968668, -
1.87e-86FFCP PHASE1:Mm9::chr9:42206745..42206774,-#_d8ca278727e4dca4986149be2999763cp@chr9:42206745..42206774, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011921..67011934,+#_d8ca278727e4dca4986149be2999763cp2@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_d8ca278727e4dca4986149be2999763cp@chr14:63099970..63099980, -
1.87e-86FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_d8ca278727e4dca4986149be2999763cp1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_d8ca278727e4dca4986149be2999763cp2@Fscn2
1.87e-86FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_d8ca278727e4dca4986149be2999763cp@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_d8ca278727e4dca4986149be2999763cp@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_d8ca278727e4dca4986149be2999763cp9@Otof
1.87e-86FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_d8ca278727e4dca4986149be2999763cp4@Chrna10
1.87e-86FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_d8ca278727e4dca4986149be2999763cp@chr17:13983102..13983126, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_d8ca278727e4dca4986149be2999763cp4@Kncn
1.87e-86FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_d8ca278727e4dca4986149be2999763cp@chr14:47293487..47293493, -
1.87e-86FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_d8ca278727e4dca4986149be2999763cp2@Plscr5
1.87e-86FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_d8ca278727e4dca4986149be2999763cp@chr3:58626291..58626298, -
1.87e-86FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_d8ca278727e4dca4986149be2999763cp@chr9:50968647..50968668, -
1.87e-86FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_d8ca278727e4dca4986149be2999763cp@chr7:27964761..27964768, +
1.87e-86FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_d8ca278727e4dca4986149be2999763cp@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_d8ca278727e4dca4986149be2999763cp@chr3:154693281..154693317, -
1.87e-86FFCP PHASE1:Mm9::chr2:128881546..128881553,-#_d8ca278727e4dca4986149be2999763cp@chr2:128881546..128881553, -
1.87e-86FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_d8ca278727e4dca4986149be2999763cp@chr12:77084875..77084885, +
1.87e-86FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_d8ca278727e4dca4986149be2999763cp@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_d8ca278727e4dca4986149be2999763cp11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_d8ca278727e4dca4986149be2999763cp@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_d8ca278727e4dca4986149be2999763cp@chr9:56208792..56208814, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0000098&oldid=3275192"