Personal tools

CL:0000098: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{CL |id=CL:0000098 |name=sensory epithelial cell |namespace=cell |def="A specialized epithelial cell involved in sensory perception. Restricted to special sense organs of...")
 
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{CL
{{CL
|id=CL:0000098
|alt_id=
|name=sensory epithelial cell
|namespace=cell
|def="A specialized epithelial cell involved in sensory perception. Restricted to special sense organs of the olfactory, gustatory, and vestibulocochlear receptor systems; contain sensory cells surrounded by supportive, non-receptive cells." [GOC:tfm, ISBN:0517223651, ISBN:0721662544]
|xref=BTO:0004301
|is_a=CL:0000066;;CL:0000197;;CL:0002371
|synonym="neuroepithelial cell" BROAD []
|comment=The term "neuroepithelial cell" is used to describe both this cell type and neurecto-epithelial cell (CL:0000710).
|comment=The term "neuroepithelial cell" is used to describe both this cell type and neurecto-epithelial cell (CL:0000710).
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A specialized epithelial cell involved in sensory perception. Restricted to special sense organs of the olfactory, gustatory, and vestibulocochlear receptor systems; contain sensory cells surrounded by supportive, non-receptive cells." [GOC:tfm, ISBN:0517223651, ISBN:0721662544]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000098
|is_a=CL:0000066 ;;CL:0000197 ;;CL:0002371
|is_obsolete=
|located_in=
|located_in=
|name=sensory epithelial cell
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|subset=
|synonym="neuroepithelial cell" BROAD []
|union_of=
|xref=BTO:0004301
}}
}}

Latest revision as of 16:29, 12 September 2014

Name:sensory epithelial cell
Namespace:FANTOM
Definition:"A specialized epithelial cell involved in sensory perception. Restricted to special sense organs of the olfactory, gustatory, and vestibulocochlear receptor systems; contain sensory cells surrounded by supportive, non-receptive cells." [GOC:tfm, ISBN:0517223651, ISBN:0721662544]
Xrefs:
links:
BTO:0004301
Synonyms: "neuroepithelial cell" BROAD []
Comments:The term "neuroepithelial cell" is used to describe both this cell type and neurecto-epithelial cell (CL:0000710).


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000066(epithelial cell),CL:0000197(receptor cell),CL:0002371(somatic cell)



Children


is a:CL:0002167 (olfactory epithelial cell),CL:0002491 (auditory epithelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 11933-125I7 (Olfactory epithelial cells, donor1)
  • 11934-125I8 (Olfactory epithelial cells, donor2)
  • 11935-125I9 (Olfactory epithelial cells, donor3)
  • 11936-126A1 (Olfactory epithelial cells, donor4)
  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

... further results Mouse (Mus musculus)

  • 11933-125I7 (Olfactory epithelial cells, donor1)
  • 11934-125I8 (Olfactory epithelial cells, donor2)
  • 11935-125I9 (Olfactory epithelial cells, donor3)
  • 11936-126A1 (Olfactory epithelial cells, donor4)
  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000098 (sensory epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.07e-130FFCP PHASE2:Hg19::chr1:110662969..110662978,+#_7a20945a5becb8ec7b9a5285468df4b6p@chr1:110662969..110662978, +
1.07e-130FFCP PHASE1:Hg19::chr1:110662969..110662978,+#_7a20945a5becb8ec7b9a5285468df4b6p@chr1:110662969..110662978, +
5.17e-105FFCP PHASE1:Hg19::chrX:69308592..69308633,+#_4915413c6f477310424a7e40a9f01812p@chrX:69308592..69308633, +
5.17e-105FFCP PHASE2:Hg19::chrX:69308592..69308633,+#_4915413c6f477310424a7e40a9f01812p@chrX:69308592..69308633, +
7.0e-88FFCP PHASE2:Hg19::chr1:110662936..110662945,+#_4e5930065b86cd87bf2536282550b85cp@chr1:110662936..110662945, +
7.0e-88FFCP PHASE1:Hg19::chr1:110662936..110662945,+#_4e5930065b86cd87bf2536282550b85cp@chr1:110662936..110662945, +
8.76e-88FFCP PHASE2:Hg19::chr2:228246460..228246471,-#_6aa9f90330c4b3a6b6ea3cc80a94db67p4@TM4SF20
8.76e-88FFCP PHASE1:Hg19::chr2:228246460..228246471,-#_6aa9f90330c4b3a6b6ea3cc80a94db67p4@TM4SF20
1.87e-86FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_d8ca278727e4dca4986149be2999763cp@chr17:27252925..27252939, +
1.87e-86FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_d8ca278727e4dca4986149be2999763cp@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_d8ca278727e4dca4986149be2999763cp@chr6:113251614..113251623, +
1.87e-86FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_d8ca278727e4dca4986149be2999763cp@chr8:13414266..13414279, +
1.87e-86FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_d8ca278727e4dca4986149be2999763cp@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_d8ca278727e4dca4986149be2999763cp@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_d8ca278727e4dca4986149be2999763cp@chr13:48087761..48087775, -
1.87e-86FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_d8ca278727e4dca4986149be2999763cp@chrX:154140781..154140788, +
1.87e-86FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_d8ca278727e4dca4986149be2999763cp2@Otol1
1.87e-86FFCP PHASE1:Mm9::chr14:20649897..20649907,+#_d8ca278727e4dca4986149be2999763cp@chr14:20649897..20649907, +
1.87e-86FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_d8ca278727e4dca4986149be2999763cp@chr11:11599532..11599539, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_d8ca278727e4dca4986149be2999763cp2@Otogl
1.87e-86FFCP PHASE1:Mm9::chr1:43454162..43454170,-#_d8ca278727e4dca4986149be2999763cp@chr1:43454162..43454170, -
1.87e-86FFCP PHASE1:Mm9::chr18:81327205..81327211,+#_d8ca278727e4dca4986149be2999763cp@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_d8ca278727e4dca4986149be2999763cp2@Espnl
1.87e-86FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_d8ca278727e4dca4986149be2999763cp@chr11:4689776..4689785, -
1.87e-86FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_d8ca278727e4dca4986149be2999763cp@chr4:154208086..154208123, +
1.87e-86FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_d8ca278727e4dca4986149be2999763cp@chr18:38104702..38104718, -
1.87e-86FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_d8ca278727e4dca4986149be2999763cp10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr3:100724698..100724706,+#_d8ca278727e4dca4986149be2999763cp@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_d8ca278727e4dca4986149be2999763cp@chr3:154459246..154459253, +
1.87e-86FFCP PHASE2:Mm9::chr9:42208023..42208043,-#_d8ca278727e4dca4986149be2999763cp4@Tecta
1.87e-86FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_d8ca278727e4dca4986149be2999763cp1@Otogl
1.87e-86FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_d8ca278727e4dca4986149be2999763cp1@Dytn
1.87e-86FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_d8ca278727e4dca4986149be2999763cp@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_d8ca278727e4dca4986149be2999763cp@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr1:182528388..182528403,+#_d8ca278727e4dca4986149be2999763cp@chr1:182528388..182528403, +
1.87e-86FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_d8ca278727e4dca4986149be2999763cp7@A730017C20Rik
1.87e-86FFCP PHASE1:Mm9::chr4:133802857..133802884,+#_d8ca278727e4dca4986149be2999763cp@chr4:133802857..133802884, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_d8ca278727e4dca4986149be2999763cp@chr17:13983160..13983167, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_d8ca278727e4dca4986149be2999763cp5@Tecta
1.87e-86FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_d8ca278727e4dca4986149be2999763cp@chr6:86745686..86745727, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207697..42207705,-#_d8ca278727e4dca4986149be2999763cp@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_d8ca278727e4dca4986149be2999763cp@chr3:35012425..35012439, +
1.87e-86FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_d8ca278727e4dca4986149be2999763cp41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_d8ca278727e4dca4986149be2999763cp@chr15:89215319..89215330, +
1.87e-86FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_d8ca278727e4dca4986149be2999763cp2@Slc26a5
1.87e-86FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_d8ca278727e4dca4986149be2999763cp@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_d8ca278727e4dca4986149be2999763cp7@A730017C20Rik
1.87e-86FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_d8ca278727e4dca4986149be2999763cp@chr16:93971357..93971363, -
1.87e-86FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_d8ca278727e4dca4986149be2999763cp3@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_d8ca278727e4dca4986149be2999763cp1@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_d8ca278727e4dca4986149be2999763cp@chr9:50968647..50968668, -
1.87e-86FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_d8ca278727e4dca4986149be2999763cp@chr4:154208086..154208123, +
1.87e-86FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_d8ca278727e4dca4986149be2999763cp2@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_d8ca278727e4dca4986149be2999763cp@chr11:114603036..114603048, +
1.87e-86FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_d8ca278727e4dca4986149be2999763cp@chr3:154459184..154459195, +
1.87e-86FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_d8ca278727e4dca4986149be2999763cp@chr5:144115382..144115389, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_d8ca278727e4dca4986149be2999763cp@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_d8ca278727e4dca4986149be2999763cp9@Otof
1.87e-86FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_d8ca278727e4dca4986149be2999763cp@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_d8ca278727e4dca4986149be2999763cp1@Grxcr1
1.87e-86FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_d8ca278727e4dca4986149be2999763cp@chr10:108316802..108316807, -
1.87e-86FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_d8ca278727e4dca4986149be2999763cp1@Tmc1
1.87e-86FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_d8ca278727e4dca4986149be2999763cp2@Plscr5
1.87e-86FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_d8ca278727e4dca4986149be2999763cp@chr3:58626291..58626298, -
1.87e-86FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_d8ca278727e4dca4986149be2999763cp@chr9:50968647..50968668, -
1.87e-86FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_d8ca278727e4dca4986149be2999763cp2@Strc
1.87e-86FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_d8ca278727e4dca4986149be2999763cp@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr11:4689837..4689845,-#_d8ca278727e4dca4986149be2999763cp@chr11:4689837..4689845, -
1.87e-86FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_d8ca278727e4dca4986149be2999763cp3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_d8ca278727e4dca4986149be2999763cp@chr5:72652660..72652667, +
1.87e-86FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_d8ca278727e4dca4986149be2999763cp9@Ankrd24
1.87e-86FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_d8ca278727e4dca4986149be2999763cp@chr17:13983102..13983126, +
1.87e-86FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_d8ca278727e4dca4986149be2999763cp@chr19:10536797..10536802, -
1.87e-86FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_d8ca278727e4dca4986149be2999763cp@chr9:56208792..56208814, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_d8ca278727e4dca4986149be2999763cp1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr10:107156949..107156956,-#_d8ca278727e4dca4986149be2999763cp3@Ptprq
1.87e-86FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_d8ca278727e4dca4986149be2999763cp@chr14:102297747..102297765, +
1.87e-86FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_d8ca278727e4dca4986149be2999763cp9@Otof
1.87e-86FFCP PHASE1:Mm9::chr12:13572961..13572974,+#_d8ca278727e4dca4986149be2999763cp@chr12:13572961..13572974, +
1.87e-86FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_d8ca278727e4dca4986149be2999763cp@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_d8ca278727e4dca4986149be2999763cp@chr12:77084875..77084885, +
1.87e-86FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_d8ca278727e4dca4986149be2999763cp1@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_d8ca278727e4dca4986149be2999763cp@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_d8ca278727e4dca4986149be2999763cp11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_d8ca278727e4dca4986149be2999763cp2@Espnl
1.87e-86FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_d8ca278727e4dca4986149be2999763cp@chr9:42206745..42206774, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_d8ca278727e4dca4986149be2999763cp1@Tectb
1.87e-86FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_d8ca278727e4dca4986149be2999763cp1@Kcna10
1.87e-86FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_d8ca278727e4dca4986149be2999763cp@chr3:31585340..31585360, +
1.87e-86FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_d8ca278727e4dca4986149be2999763cp6@Jag1
1.87e-86FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_d8ca278727e4dca4986149be2999763cp5@BC030867
1.87e-86FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_d8ca278727e4dca4986149be2999763cp@chr18:38104702..38104718, -
1.87e-86FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_d8ca278727e4dca4986149be2999763cp@chr11:94371127..94371139, -
1.87e-86FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_d8ca278727e4dca4986149be2999763cp1@Kncn
1.87e-86FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_d8ca278727e4dca4986149be2999763cp@chr3:35012425..35012439, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_d8ca278727e4dca4986149be2999763cp1@Kncn
1.87e-86FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_d8ca278727e4dca4986149be2999763cp11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_d8ca278727e4dca4986149be2999763cp@chr2:73232344..73232356, -
1.87e-86FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_d8ca278727e4dca4986149be2999763cp11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_d8ca278727e4dca4986149be2999763cp5@BC030867

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0000098&oldid=3275192"