CL:0000115
From FANTOM5_SSTAR
Name: | endothelial cell | ||
---|---|---|---|
Namespace: | FANTOM | ||
Definition: | "An endothelial cell comprises the outermost layer or lining of anatomical structures and can be squamous or cuboidal. In mammals, endothelial cell has vimentin filaments and is derived from the mesoderm." [GOC:tfm, http://63.198.234.228/OpenFMA/Endothelial%20cell.html, https://sourceforge.net/tracker/?func | ||
Xrefs: |
| ||
Synonyms: | "endotheliocyte" EXACT [] | ||
Comments: | From FMA: 9.07.2001: Endothelial cell has always been classified as a kind of epithelial cell, specifically a squamous cell but that is not true. First, endothelial cell can either be squamous or cuboidal (e.g. high-endothelial cell) and secondly, it has different embryological derivation (mesodermal) than a true epithelial cell (ectodermal and endodermal). The basis for present classification is the fact that it comprises the outermost layer or lining of anatomical structures (location-based) but a better structural basis for the differentia is the cytoskeleton of the cell. Endothelial cell has vimentin filaments while an epithelial cell has keratin filaments. [Onard]. |
Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.
link to ontology dataset
data
Parents
is_a: | CL:0000213(lining cell),CL:0002078(meso-epithelial cell) |
---|
Children
is a: | CL:0002139 (endothelial cell of vascular tree),CL:0002188 (glomerular endothelial cell),CL:0002262 (endothelial cell of sinusoid),CL:0002367 (trabecular meshwork cell),FF:13595-146E4 (liver sinusoidal endothelial cells, sham operation, biol_rep1),FF:13596-146E5 (liver sinusoidal endothelial cells, sham operation, biol_rep2),FF:13597-146E6 (liver sinusoidal endothelial cells, sham operation, biol_rep3),FF:13598-146E7 (liver sinusoidal endothelial cells, partial hepatectomy, 02hr, biol_rep1),FF:13599-146E8 (liver sinusoidal endothelial cells, partial hepatectomy, 02hr, biol_rep2),FF:13600-146E9 (liver sinusoidal endothelial cells, partial hepatectomy, 02hr, biol_rep3),FF:13601-146F1 (liver sinusoidal endothelial cells, partial hepatectomy, 30hr, biol_rep1),FF:13602-146F2 (liver sinusoidal endothelial cells, partial hepatectomy, 30hr, biol_rep2),FF:13603-146F3 (liver sinusoidal endothelial cells, partial hepatectomy, 30hr, biol_rep3),FF:13604-146F4 (liver sinusoidal endothelial cells, partial hepatectomy, 48hr, biol_rep1),FF:13605-146F5 (liver sinusoidal endothelial cells, partial hepatectomy, 48hr, biol_rep2),FF:13606-146F6 (liver sinusoidal endothelial cells, partial hepatectomy, 48hr, biol_rep3),FF:13607-146F7 (liver sinusoidal endothelial cells, partial hepatectomy, week01, biol_rep1),FF:13608-146F8 (liver sinusoidal endothelial cells, partial hepatectomy, week01, biol_rep2),FF:13609-146F9 (liver sinusoidal endothelial cells, partial hepatectomy, week01, biol_rep3) |
---|---|
derives from: | FF:0000046 (human endothelial cell sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11229-116C5 (CD14+ monocyte derived endothelial progenitor cells, donor1)
- 11236-116D3 (Endothelial Cells - Lymphatic, donor1)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11264-116G4 (Endothelial Cells - Artery, donor1)
- 11265-116G5 (Endothelial Cells - Microvascular, donor1)
- 11266-116G6 (Endothelial Cells - Thoracic, donor1)
- 11267-116G7 (Endothelial Cells - Vein, donor1)
- 11310-117C5 (CD14+ monocyte derived endothelial progenitor cells, donor2)
... further results Mouse (Mus musculus)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11229-116C5 (CD14+ monocyte derived endothelial progenitor cells, donor1)
- 11236-116D3 (Endothelial Cells - Lymphatic, donor1)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11264-116G4 (Endothelial Cells - Artery, donor1)
- 11265-116G5 (Endothelial Cells - Microvascular, donor1)
- 11266-116G6 (Endothelial Cells - Thoracic, donor1)
- 11267-116G7 (Endothelial Cells - Vein, donor1)
- 11310-117C5 (CD14+ monocyte derived endothelial progenitor cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000115 (endothelial cell), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
9.88e-148 | FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_06bc30e74497af619d61975e77d8eb98 | p@chr6:3753188..3753192, - |
9.88e-148 | FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_06bc30e74497af619d61975e77d8eb98 | p@chr6:3753188..3753192, - |
1.61e-140 | FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_fab41e54c2e336d47c48c7d6dee52670 | p1@MIR216A |
1.61e-140 | FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_fab41e54c2e336d47c48c7d6dee52670 | p1@MIR216A |
6.06e-136 | FFCP PHASE1:Hg19::chr17:62084108..62084111,-#_9a0069514c9294f599f7e5cc7fbf874b | p5@ICAM2 |
6.06e-136 | FFCP PHASE2:Hg19::chr17:62084108..62084111,-#_9a0069514c9294f599f7e5cc7fbf874b | p5@ICAM2 |
9.36e-136 | FFCP PHASE2:Hg19::chr11:124761247..124761258,-#_85f7ac7e0263a7f05e6cc84e9456b9d2 | p@chr11:124761247..124761258, - |
9.36e-136 | FFCP PHASE1:Hg19::chr11:124761247..124761258,-#_85f7ac7e0263a7f05e6cc84e9456b9d2 | p@chr11:124761247..124761258, - |
8.29e-123 | FFCP PHASE1:Hg19::chr16:2220383..2220402,+#_0a24232b2879c978fc4e9db6fa2d5b69 | p@chr16:2220383..2220402, + |
8.29e-123 | FFCP PHASE2:Hg19::chr16:2220383..2220402,+#_0a24232b2879c978fc4e9db6fa2d5b69 | +, p@chr16:2220383..2220402 |
7.69e-118 | FFCP PHASE2:Hg19::chrX:71299684..71299699,+#_9b523ba8e131c3ff26b28cd1106422cc | p@chrX:71299684..71299699, + |
7.69e-118 | FFCP PHASE1:Hg19::chrX:71299684..71299699,+#_9b523ba8e131c3ff26b28cd1106422cc | p@chrX:71299684..71299699, + |
8.89e-118 | FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_21ce1d641a2177218ecff1a2973dc1c5 | p1@ENST00000513158 |
8.89e-118 | FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_21ce1d641a2177218ecff1a2973dc1c5 | p1@ENST00000513158 |
2.23e-117 | FFCP PHASE2:Hg19::chr13:32835894..32835907,+#_785c732e886f06e401cd15af7c92f860 | p@chr13:32835894..32835907, + |
2.23e-117 | FFCP PHASE1:Hg19::chr13:32835894..32835907,+#_785c732e886f06e401cd15af7c92f860 | p@chr13:32835894..32835907, + |
3.21e-114 | FFCP PHASE2:Hg19::chr18:33047117..33047138,-#_381dcad6998a74e5410f9a824c731022 | p@chr18:33047117..33047138, - |
3.21e-114 | FFCP PHASE1:Hg19::chr18:33047117..33047138,-#_381dcad6998a74e5410f9a824c731022 | p@chr18:33047117..33047138, - |
5.66e-114 | FFCP PHASE1:Hg19::chr15:39423060..39423066,+#_9bcfe4f795a9e4c53d755f86ed810026 | p@chr15:39423060..39423066, + |
5.66e-114 | FFCP PHASE2:Hg19::chr15:39423060..39423066,+#_9bcfe4f795a9e4c53d755f86ed810026 | p@chr15:39423060..39423066, + |
5.52e-113 | FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_684b3e4bb6885f0a1d1b627d7f2e3c99 | p@chr18:33046982..33046991, - |
5.52e-113 | FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_684b3e4bb6885f0a1d1b627d7f2e3c99 | p@chr18:33046982..33046991, - |
4.6e-112 | FFCP PHASE2:Hg19::chrX:15518894..15518905,+#_16f64d24281979e3f09e9ffb7a1ff9b0 | p2@BMX |
4.6e-112 | FFCP PHASE1:Hg19::chrX:15518894..15518905,+#_16f64d24281979e3f09e9ffb7a1ff9b0 | p2@BMX |
2.66e-111 | FFCP PHASE1:Hg19::chr12:105863654..105863682,+#_25731f1147645a59858d91acc0ec7a96 | p@chr12:105863654..105863682, + |
2.66e-111 | FFCP PHASE2:Hg19::chr12:105863654..105863682,+#_25731f1147645a59858d91acc0ec7a96 | +, p@chr12:105863654..105863682 |
1.63e-110 | FFCP PHASE2:Hg19::chr14:38725249..38725254,-#_e37384ebfd73de880ebb5562b9abcbcd | p6@CLEC14A |
1.63e-110 | FFCP PHASE1:Hg19::chr14:38725249..38725254,-#_e37384ebfd73de880ebb5562b9abcbcd | p6@CLEC14A |
7.97e-110 | FFCP PHASE2:Hg19::chr14:38725228..38725236,-#_a8b40fb330c1d3e81fba7f2f8ed0876b | p5@CLEC14A |
7.97e-110 | FFCP PHASE1:Hg19::chr14:38725228..38725236,-#_a8b40fb330c1d3e81fba7f2f8ed0876b | p5@CLEC14A |
6.56e-109 | FFCP PHASE2:Hg19::chr18:33047157..33047168,-#_6b2dc6ff68fb7578d5809bc92e1707c1 | p@chr18:33047157..33047168, - |
6.56e-109 | FFCP PHASE1:Hg19::chr18:33047157..33047168,-#_6b2dc6ff68fb7578d5809bc92e1707c1 | p@chr18:33047157..33047168, - |
7.47e-109 | FFCP PHASE1:Hg19::chr12:105863636..105863650,+#_8ad218010ff3980fae406f8e73352966 | p@chr12:105863636..105863650, + |
7.47e-109 | FFCP PHASE2:Hg19::chr12:105863636..105863650,+#_8ad218010ff3980fae406f8e73352966 | p@chr12:105863636..105863650, + |
1.87e-108 | FFCP PHASE2:Hg19::chr3:43538305..43538325,-#_66692a06d918de47eff75e48ef7cf4d1 | p@chr3:43538305..43538325, - |
1.87e-108 | FFCP PHASE1:Hg19::chr3:43538305..43538325,-#_66692a06d918de47eff75e48ef7cf4d1 | p@chr3:43538305..43538325, - |
1.97e-108 | FFCP PHASE2:Hg19::chr10:129785574..129785580,+#_f65ae4b4706cd3cd3f7135eedd961d5b | p14@PTPRE |
1.97e-108 | FFCP PHASE1:Hg19::chr10:129785574..129785580,+#_f65ae4b4706cd3cd3f7135eedd961d5b | p14@PTPRE |
2.37e-108 | FFCP PHASE2:Hg19::chr9:139543390..139543404,+#_246a11e56064fdca30885871771165af | p@chr9:139543390..139543404, + |
2.37e-108 | FFCP PHASE1:Hg19::chr9:139543390..139543404,+#_246a11e56064fdca30885871771165af | p@chr9:139543390..139543404, + |
9.99e-107 | FFCP PHASE1:Hg19::chr19:4639579..4639589,+#_07c5ca06b169e93ec9904b869098b483 | p2@TNFAIP8L1 |
9.99e-107 | FFCP PHASE2:Hg19::chr19:4639579..4639589,+#_07c5ca06b169e93ec9904b869098b483 | p2@TNFAIP8L1 |
5.19e-104 | FFCP PHASE1:Hg19::chr13:32835912..32835936,+#_a7d084e376072fc3d27dae6989cd2181 | p@chr13:32835912..32835936, + |
5.19e-104 | FFCP PHASE2:Hg19::chr13:32835912..32835936,+#_a7d084e376072fc3d27dae6989cd2181 | p@chr13:32835912..32835936, + |
8.89e-103 | FFCP PHASE1:Hg19::chr13:32838801..32838818,+#_e6d1da271bb41cc6b46da58bd6f8048a | p9@FRY |
8.89e-103 | FFCP PHASE2:Hg19::chr13:32838801..32838818,+#_e6d1da271bb41cc6b46da58bd6f8048a | p9@FRY |
3.87e-101 | FFCP PHASE1:Hg19::chr17:47287786..47287797,+#_beaba73ecc618e5758f5218112744586 | p4@ABI3 |
3.87e-101 | FFCP PHASE2:Hg19::chr17:47287786..47287797,+#_beaba73ecc618e5758f5218112744586 | p4@ABI3 |
1.92e-100 | FFCP PHASE1:Hg19::chr19:41985048..41985050,-#_c61c32af69712cdc8ae290920468e219 | p@chr19:41985048..41985050, - |
1.92e-100 | FFCP PHASE2:Hg19::chr19:41985048..41985050,-#_c61c32af69712cdc8ae290920468e219 | p@chr19:41985048..41985050, - |
9.53e-100 | FFCP PHASE1:Hg19::chr16:66413317..66413328,+#_de3d3861818eb9acef73a3d5a70e3250 | p1@AB385138 |
9.53e-100 | FFCP PHASE2:Hg19::chr16:66413317..66413328,+#_de3d3861818eb9acef73a3d5a70e3250 | p1@AB385138 |
9.54e-99 | FFCP PHASE1:Hg19::chr12:118112251..118112272,-#_6aa08e6bfd1d85a8e73a8f040411daeb | p12@KSR2 |
9.54e-99 | FFCP PHASE2:Hg19::chr12:118112251..118112272,-#_6aa08e6bfd1d85a8e73a8f040411daeb | p12@KSR2 |
2.11e-98 | FFCP PHASE2:Hg19::chr7:150329732..150329739,-#_5f3978443f6c36d83318fdb322df882f | p8@GIMAP6 |
2.11e-98 | FFCP PHASE1:Hg19::chr7:150329732..150329739,-#_5f3978443f6c36d83318fdb322df882f | p8@GIMAP6 |
1.26e-97 | FFCP PHASE1:Hg19::chr5:176433333..176433349,-#_ec81fa9cd193f97b0802ecbb0f1e2d93 | p11@UIMC1 |
1.26e-97 | FFCP PHASE2:Hg19::chr5:176433333..176433349,-#_ec81fa9cd193f97b0802ecbb0f1e2d93 | p11@UIMC1 |
4.26e-97 | FFCP PHASE2:Hg19::chr10:50153735..50153750,+#_f9bc43df97004d7f744aa7deee63561c | p6@WDFY4 |
4.26e-97 | FFCP PHASE1:Hg19::chr10:50153735..50153750,+#_f9bc43df97004d7f744aa7deee63561c | p6@WDFY4 |
5.01e-97 | FFCP PHASE1:Hg19::chr12:105863705..105863718,+#_6539287d81ebfcfefb27a97039d4d2d8 | p@chr12:105863705..105863718, + |
5.01e-97 | FFCP PHASE2:Hg19::chr12:105863705..105863718,+#_6539287d81ebfcfefb27a97039d4d2d8 | p@chr12:105863705..105863718, + |
3.98e-96 | FFCP PHASE2:Hg19::chr10:99655692..99655725,-#_51ba59a5683c8361aa6aa645b5701691 | p@chr10:99655692..99655725, - |
3.98e-96 | FFCP PHASE1:Hg19::chr10:99655692..99655725,-#_51ba59a5683c8361aa6aa645b5701691 | p@chr10:99655692..99655725, - |
8.76e-96 | FFCP PHASE2:Hg19::chr11:124767798..124767809,-#_68fa61fd333ba639cb688dc6931ca6c1 | p3@ROBO4 |
8.76e-96 | FFCP PHASE1:Hg19::chr11:124767798..124767809,-#_68fa61fd333ba639cb688dc6931ca6c1 | p3@ROBO4 |
1.94e-95 | FFCP PHASE2:Hg19::chr12:80084018..80084035,-#_64578b003dc87499ed0c1e19f3483119 | p17@PAWR |
1.94e-95 | FFCP PHASE1:Hg19::chr12:80084018..80084035,-#_64578b003dc87499ed0c1e19f3483119 | p17@PAWR |
6.54e-95 | FFCP PHASE1:Hg19::chr17:75137460..75137485,+#_f0fa33f8112dd683b0eccd4b617b414a | p@chr17:75137460..75137485, + |
6.54e-95 | FFCP PHASE2:Hg19::chr17:75137460..75137485,+#_f0fa33f8112dd683b0eccd4b617b414a | p@chr17:75137460..75137485, + |
1.27e-94 | FFCP PHASE2:Hg19::chr6:132455180..132455197,+#_ccf5128a2e6e14689f6343d2310460fc | p2@LOC100507254 |
1.27e-94 | FFCP PHASE1:Hg19::chr6:132455180..132455197,+#_ccf5128a2e6e14689f6343d2310460fc | p2@LOC100507254 |
1.3e-93 | FFCP PHASE2:Hg19::chr3:58034268..58034295,+#_65485d3061024adcf41fafa0db23adcd | p@chr3:58034268..58034295, + |
1.3e-93 | FFCP PHASE1:Hg19::chr3:58034268..58034295,+#_65485d3061024adcf41fafa0db23adcd | p@chr3:58034268..58034295, + |
1.98e-93 | FFCP PHASE1:Hg19::chr6:78171774..78171792,+#_90ab8e2a9b473a97de881613c2652f66 | p@chr6:78171774..78171792, + |
1.98e-93 | FFCP PHASE2:Hg19::chr6:78171774..78171792,+#_90ab8e2a9b473a97de881613c2652f66 | p@chr6:78171774..78171792, + |
1.01e-92 | FFCP PHASE1:Hg19::chr19:47220191..47220198,-#_56a3ccd9f872e025444523751eec91fe | p14@PRKD2 |
1.01e-92 | FFCP PHASE2:Hg19::chr19:47220191..47220198,-#_56a3ccd9f872e025444523751eec91fe | p14@PRKD2 |
1.93e-92 | FFCP PHASE1:Hg19::chr18:33047039..33047063,-#_b583652e47286b1cac8d3462d285a2fd | p@chr18:33047039..33047063, - |
1.93e-92 | FFCP PHASE2:Hg19::chr18:33047039..33047063,-#_b583652e47286b1cac8d3462d285a2fd | p@chr18:33047039..33047063, - |
2.0e-92 | FFCP PHASE2:Hg19::chr18:33047076..33047099,-#_0a111c3378aa97f5ed3ee9bf782840ae | p@chr18:33047076..33047099, - |
2.0e-92 | FFCP PHASE1:Hg19::chr18:33047076..33047099,-#_0a111c3378aa97f5ed3ee9bf782840ae | p@chr18:33047076..33047099, - |
2.0e-92 | FFCP PHASE1:Hg19::chr13:32838839..32838850,+#_0a111c3378aa97f5ed3ee9bf782840ae | p20@FRY |
2.0e-92 | FFCP PHASE1:Hg19::chr7:139741594..139741615,-#_0a111c3378aa97f5ed3ee9bf782840ae | p5@PARP12 |
2.0e-92 | FFCP PHASE2:Hg19::chr13:32838839..32838850,+#_0a111c3378aa97f5ed3ee9bf782840ae | p20@FRY |
2.0e-92 | FFCP PHASE2:Hg19::chr7:139741594..139741615,-#_0a111c3378aa97f5ed3ee9bf782840ae | p5@PARP12 |
6.65e-92 | FFCP PHASE1:Hg19::chr12:71031247..71031262,-#_4a40390335d2c543eefdf3784f1ff3db | p7@PTPRB |
6.65e-92 | FFCP PHASE2:Hg19::chr12:71031247..71031262,-#_4a40390335d2c543eefdf3784f1ff3db | p7@PTPRB |
1.75e-91 | FFCP PHASE2:Hg19::chr10:50153703..50153720,+#_6ca380c4836d4b130c90080dff551db7 | p7@WDFY4 |
1.75e-91 | FFCP PHASE1:Hg19::chr10:50153703..50153720,+#_6ca380c4836d4b130c90080dff551db7 | p7@WDFY4 |
2.48e-91 | FFCP PHASE1:Hg19::chr21:39869867..39869880,-#_b80cc45b9e6a64bf29bf6488c43165c0 | p@chr21:39869867..39869880, - |
2.48e-91 | FFCP PHASE2:Hg19::chr21:39869867..39869880,-#_b80cc45b9e6a64bf29bf6488c43165c0 | p@chr21:39869867..39869880, - |
5.09e-91 | FFCP PHASE2:Hg19::chr11:62344721..62344758,-#_8ca4b5923b1ca1721d461f978b2879d5 | p2@TUT1 |
5.09e-91 | FFCP PHASE1:Hg19::chr11:62344721..62344758,-#_8ca4b5923b1ca1721d461f978b2879d5 | p2@TUT1 |
1.11e-90 | FFCP PHASE2:Hg19::chr1:208063620..208063634,-#_931992a8819a1541b7815c9a4e82fbba | p4@CD34 |
1.11e-90 | FFCP PHASE1:Hg19::chr1:208063620..208063634,-#_931992a8819a1541b7815c9a4e82fbba | p4@CD34 |
1.26e-90 | FFCP PHASE1:Hg19::chr2:225266779..225266786,-#_97f6c73a7784fea0da7857c3c9bdd610 | p4@FAM124B |
1.26e-90 | FFCP PHASE2:Hg19::chr2:225266779..225266786,-#_97f6c73a7784fea0da7857c3c9bdd610 | p4@FAM124B |
2.6e-89 | FFCP PHASE1:Hg19::chr7:39663061..39663072,+#_36f5fa3e393cc28b9d225cc42eace732 | p6@RALA |
2.6e-89 | FFCP PHASE2:Hg19::chr7:39663061..39663072,+#_36f5fa3e393cc28b9d225cc42eace732 | p6@RALA |