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{{CL
{{CL
|id=CL:0000197
|alt_id=
|name=receptor cell
|namespace=cell
|def=
|xref=
|is_a=CL:0000144
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000197
|is_a=CL:0000003
|is_obsolete=
|located_in=
|located_in=
|name=receptor cell
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|subset=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:31, 12 September 2014

Name:receptor cell
Namespace:FANTOM


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000003(native cell)



Children


is a:CL:0000006 (neuronal receptor cell),CL:0000098 (sensory epithelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 11933-125I7 (Olfactory epithelial cells, donor1)
  • 11934-125I8 (Olfactory epithelial cells, donor2)
  • 11935-125I9 (Olfactory epithelial cells, donor3)
  • 11936-126A1 (Olfactory epithelial cells, donor4)
  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

... further results Mouse (Mus musculus)

  • 11933-125I7 (Olfactory epithelial cells, donor1)
  • 11934-125I8 (Olfactory epithelial cells, donor2)
  • 11935-125I9 (Olfactory epithelial cells, donor3)
  • 11936-126A1 (Olfactory epithelial cells, donor4)
  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000197 (receptor cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.07e-130FFCP PHASE2:Hg19::chr1:110662969..110662978,+#_41aeeec02cd4e16b0593a83668561f56p@chr1:110662969..110662978, +
1.07e-130FFCP PHASE1:Hg19::chr1:110662969..110662978,+#_41aeeec02cd4e16b0593a83668561f56p@chr1:110662969..110662978, +
5.17e-105FFCP PHASE1:Hg19::chrX:69308592..69308633,+#_ec6cb7824c8f69a5787b18c66d6a0bdbp@chrX:69308592..69308633, +
5.17e-105FFCP PHASE2:Hg19::chrX:69308592..69308633,+#_ec6cb7824c8f69a5787b18c66d6a0bdbp@chrX:69308592..69308633, +
7.0e-88FFCP PHASE2:Hg19::chr1:110662936..110662945,+#_d38632db69a580a3b4023a2c94414ae5p@chr1:110662936..110662945, +
7.0e-88FFCP PHASE1:Hg19::chr1:110662936..110662945,+#_d38632db69a580a3b4023a2c94414ae5p@chr1:110662936..110662945, +
8.76e-88FFCP PHASE2:Hg19::chr2:228246460..228246471,-#_ef9a87f66e3fbe3152f89a1276cdf965p4@TM4SF20
8.76e-88FFCP PHASE1:Hg19::chr2:228246460..228246471,-#_ef9a87f66e3fbe3152f89a1276cdf965p4@TM4SF20
1.87e-86FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_13da6b5f98214549a3311eca6dad083fp3@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_13da6b5f98214549a3311eca6dad083fp1@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_13da6b5f98214549a3311eca6dad083fp5@Tecta
1.87e-86FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_13da6b5f98214549a3311eca6dad083fp@chr6:86745686..86745727, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207697..42207705,-#_13da6b5f98214549a3311eca6dad083fp@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_13da6b5f98214549a3311eca6dad083fp@chr3:35012425..35012439, +
1.87e-86FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_13da6b5f98214549a3311eca6dad083fp41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_13da6b5f98214549a3311eca6dad083fp@chr15:89215319..89215330, +
1.87e-86FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_13da6b5f98214549a3311eca6dad083fp2@Slc26a5
1.87e-86FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_13da6b5f98214549a3311eca6dad083fp@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_13da6b5f98214549a3311eca6dad083fp7@A730017C20Rik
1.87e-86FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_13da6b5f98214549a3311eca6dad083fp@chr16:93971357..93971363, -
1.87e-86FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_13da6b5f98214549a3311eca6dad083fp1@Tmc1
1.87e-86FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_13da6b5f98214549a3311eca6dad083fp@chr9:50968647..50968668, -
1.87e-86FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_13da6b5f98214549a3311eca6dad083fp@chr4:154208086..154208123, +
1.87e-86FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_13da6b5f98214549a3311eca6dad083fp2@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_13da6b5f98214549a3311eca6dad083fp@chr11:114603036..114603048, +
1.87e-86FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_13da6b5f98214549a3311eca6dad083fp@chr3:154459184..154459195, +
1.87e-86FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_13da6b5f98214549a3311eca6dad083fp@chr5:144115382..144115389, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_13da6b5f98214549a3311eca6dad083fp@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_13da6b5f98214549a3311eca6dad083fp9@Otof
1.87e-86FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_13da6b5f98214549a3311eca6dad083fp@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_13da6b5f98214549a3311eca6dad083fp1@Grxcr1
1.87e-86FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_13da6b5f98214549a3311eca6dad083fp@chr10:108316802..108316807, -
1.87e-86FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_13da6b5f98214549a3311eca6dad083fp@chr17:13983102..13983126, +
1.87e-86FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_13da6b5f98214549a3311eca6dad083fp2@Plscr5
1.87e-86FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_13da6b5f98214549a3311eca6dad083fp@chr3:58626291..58626298, -
1.87e-86FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_13da6b5f98214549a3311eca6dad083fp@chr9:50968647..50968668, -
1.87e-86FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_13da6b5f98214549a3311eca6dad083fp2@Strc
1.87e-86FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_13da6b5f98214549a3311eca6dad083fp@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr11:4689837..4689845,-#_13da6b5f98214549a3311eca6dad083fp@chr11:4689837..4689845, -
1.87e-86FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_13da6b5f98214549a3311eca6dad083fp3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_13da6b5f98214549a3311eca6dad083fp@chr5:72652660..72652667, +
1.87e-86FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_13da6b5f98214549a3311eca6dad083fp9@Ankrd24
1.87e-86FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_13da6b5f98214549a3311eca6dad083fp1@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_13da6b5f98214549a3311eca6dad083fp@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_13da6b5f98214549a3311eca6dad083fp11@Tsga14
1.87e-86FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_13da6b5f98214549a3311eca6dad083fp@chr19:10536797..10536802, -
1.87e-86FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_13da6b5f98214549a3311eca6dad083fp@chr9:56208792..56208814, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_13da6b5f98214549a3311eca6dad083fp1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr10:107156949..107156956,-#_13da6b5f98214549a3311eca6dad083fp3@Ptprq
1.87e-86FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_13da6b5f98214549a3311eca6dad083fp@chr14:102297747..102297765, +
1.87e-86FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_13da6b5f98214549a3311eca6dad083fp9@Otof
1.87e-86FFCP PHASE1:Mm9::chr12:13572961..13572974,+#_13da6b5f98214549a3311eca6dad083fp@chr12:13572961..13572974, +
1.87e-86FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_13da6b5f98214549a3311eca6dad083fp@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_13da6b5f98214549a3311eca6dad083fp@chr12:77084875..77084885, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_13da6b5f98214549a3311eca6dad083fp1@Kncn
1.87e-86FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_13da6b5f98214549a3311eca6dad083fp11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_13da6b5f98214549a3311eca6dad083fp@chr2:73232344..73232356, -
1.87e-86FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_13da6b5f98214549a3311eca6dad083fp2@Espnl
1.87e-86FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_13da6b5f98214549a3311eca6dad083fp@chr9:42206745..42206774, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_13da6b5f98214549a3311eca6dad083fp1@Tectb
1.87e-86FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_13da6b5f98214549a3311eca6dad083fp1@Kcna10
1.87e-86FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_13da6b5f98214549a3311eca6dad083fp@chr3:31585340..31585360, +
1.87e-86FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_13da6b5f98214549a3311eca6dad083fp6@Jag1
1.87e-86FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_13da6b5f98214549a3311eca6dad083fp5@BC030867
1.87e-86FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_13da6b5f98214549a3311eca6dad083fp@chr18:38104702..38104718, -
1.87e-86FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_13da6b5f98214549a3311eca6dad083fp@chr11:94371127..94371139, -
1.87e-86FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_13da6b5f98214549a3311eca6dad083fp1@Kncn
1.87e-86FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_13da6b5f98214549a3311eca6dad083fp@chr3:35012425..35012439, +
1.87e-86FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_13da6b5f98214549a3311eca6dad083fp@chr6:113251570..113251578, +
1.87e-86FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_13da6b5f98214549a3311eca6dad083fp1@Espnl
1.87e-86FFCP PHASE2:Mm9::chr14:47293487..47293493,-#_13da6b5f98214549a3311eca6dad083fp@chr14:47293487..47293493, -
1.87e-86FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_13da6b5f98214549a3311eca6dad083fp11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_13da6b5f98214549a3311eca6dad083fp5@BC030867
1.87e-86FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_13da6b5f98214549a3311eca6dad083fp@chr18:42158627..42158630, -
1.87e-86FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_13da6b5f98214549a3311eca6dad083fp@chr8:13414289..13414295, +
1.87e-86FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_13da6b5f98214549a3311eca6dad083fp@chr15:65641741..65641748, +
1.87e-86FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_13da6b5f98214549a3311eca6dad083fp@chr13:78257491..78257498, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257491..78257498,+#_13da6b5f98214549a3311eca6dad083fp@chr13:78257491..78257498, +
1.87e-86FFCP PHASE2:Mm9::chrX:154140800..154140810,+#_13da6b5f98214549a3311eca6dad083fp@chrX:154140800..154140810, +
1.87e-86FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_13da6b5f98214549a3311eca6dad083fp@chr2:128881546..128881553, -
1.87e-86FFCP PHASE2:Mm9::chr1:43454162..43454170,-#_13da6b5f98214549a3311eca6dad083fp@chr1:43454162..43454170, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349418..107349423,-#_13da6b5f98214549a3311eca6dad083fp5@Otogl
1.87e-86FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_13da6b5f98214549a3311eca6dad083fp@chr17:13983179..13983190, +
1.87e-86FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_13da6b5f98214549a3311eca6dad083fp@chr3:154693281..154693317, -
1.87e-86FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_13da6b5f98214549a3311eca6dad083fp10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_13da6b5f98214549a3311eca6dad083fp2@Otogl
1.87e-86FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_13da6b5f98214549a3311eca6dad083fp10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_13da6b5f98214549a3311eca6dad083fp@chr7:139597684..139597691, +
1.87e-86FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_13da6b5f98214549a3311eca6dad083fp3@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_13da6b5f98214549a3311eca6dad083fp@chr5:150945209..150945220, +
1.87e-86FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_13da6b5f98214549a3311eca6dad083fp4@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_13da6b5f98214549a3311eca6dad083fp2@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_13da6b5f98214549a3311eca6dad083fp3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_13da6b5f98214549a3311eca6dad083fp1@Otog
1.87e-86FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_13da6b5f98214549a3311eca6dad083fp@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_13da6b5f98214549a3311eca6dad083fp5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_13da6b5f98214549a3311eca6dad083fp7@Tecta
1.87e-86FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_13da6b5f98214549a3311eca6dad083fp@chr15:89215333..89215341, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_13da6b5f98214549a3311eca6dad083fp@chr1:172843813..172843834, -
1.87e-86FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_13da6b5f98214549a3311eca6dad083fp@chr5:147854240..147854249, -

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