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Difference between revisions of "CL:0000199"

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|name=mechanoreceptor cell
|namespace=cell
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|namespace=FANTOM
 
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Latest revision as of 07:31, 12 September 2014

Name:mechanoreceptor cell
Namespace:FANTOM
Definition:"A cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system." [MESH:A.08.800.550.700.500]


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000101(sensory neuron)



Children


is a:CL:0000855 (sensory hair cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

Mouse (Mus musculus)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000199 (mechanoreceptor cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
3.07e-86FFCP PHASE1:Mm9::chr10:18246142..18246145,+#_226491ab2d1222970ccaee28dec49830p@chr10:18246142..18246145, +
3.07e-86FFCP PHASE2:Mm9::chr6:64684692..64684697,+#_226491ab2d1222970ccaee28dec49830p@chr6:64684692..64684697, +
3.07e-86FFCP PHASE1:Mm9::chr11:114652018..114652020,+#_226491ab2d1222970ccaee28dec49830p@chr11:114652018..114652020, +
3.07e-86FFCP PHASE2:Mm9::chr2:53464193..53464197,+#_226491ab2d1222970ccaee28dec49830p@chr2:53464193..53464197, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684505..64684512,+#_226491ab2d1222970ccaee28dec49830p@chr6:64684505..64684512, +
3.07e-86FFCP PHASE1:Mm9::chr2:180335744..180335746,+#_226491ab2d1222970ccaee28dec49830p@chr2:180335744..180335746, +
3.07e-86FFCP PHASE2:Mm9::chr17:34185362..34185370,+#_226491ab2d1222970ccaee28dec49830p10@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr9:87599703..87599714,-#_226491ab2d1222970ccaee28dec49830p@chr9:87599703..87599714, -
3.07e-86FFCP PHASE1:Mm9::chr5:72652671..72652676,+#_226491ab2d1222970ccaee28dec49830p@chr5:72652671..72652676, +
3.07e-86FFCP PHASE2:Mm9::chr13:31171742..31171745,-#_226491ab2d1222970ccaee28dec49830p@chr13:31171742..31171745, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185378..34185383,+#_226491ab2d1222970ccaee28dec49830p11@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr15:97828021..97828028,-#_226491ab2d1222970ccaee28dec49830p@chr15:97828021..97828028, -
3.07e-86FFCP PHASE1:Mm9::chr3:127520184..127520191,-#_226491ab2d1222970ccaee28dec49830p@chr3:127520184..127520191, -
3.07e-86FFCP PHASE1:Mm9::chr6:36966723..36966734,-#_226491ab2d1222970ccaee28dec49830p@chr6:36966723..36966734, -
3.07e-86FFCP PHASE2:Mm9::chr4:106770202..106770208,+#_226491ab2d1222970ccaee28dec49830p@chr4:106770202..106770208, +
3.07e-86FFCP PHASE2:Mm9::chr2:180335744..180335746,+#_226491ab2d1222970ccaee28dec49830p@chr2:180335744..180335746, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684637..64684654,+#_226491ab2d1222970ccaee28dec49830p@chr6:64684637..64684654, +
3.07e-86FFCP PHASE2:Mm9::chr17:34185378..34185383,+#_226491ab2d1222970ccaee28dec49830p11@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr2:12032746..12032751,-#_226491ab2d1222970ccaee28dec49830p@chr2:12032746..12032751, -
3.07e-86FFCP PHASE1:Mm9::chr2:142906965..142906982,-#_226491ab2d1222970ccaee28dec49830p@chr2:142906965..142906982, -
3.07e-86FFCP PHASE1:Mm9::chr2:53464193..53464197,+#_226491ab2d1222970ccaee28dec49830p@chr2:53464193..53464197, +
3.07e-86FFCP PHASE1:Mm9::chr17:34185389..34185401,+#_226491ab2d1222970ccaee28dec49830p8@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr16:55283394..55283400,-#_226491ab2d1222970ccaee28dec49830p1@Zpld1
3.07e-86FFCP PHASE2:Mm9::chr6:83129695..83129696,+#_226491ab2d1222970ccaee28dec49830p24@Dctn1
3.07e-86FFCP PHASE1:Mm9::chr18:66033513..66033517,-#_226491ab2d1222970ccaee28dec49830p@chr18:66033513..66033517, -
3.07e-86FFCP PHASE2:Mm9::chr3:127520184..127520191,-#_226491ab2d1222970ccaee28dec49830p@chr3:127520184..127520191, -
3.07e-86FFCP PHASE1:Mm9::chr6:36966993..36966996,-#_226491ab2d1222970ccaee28dec49830p@chr6:36966993..36966996, -
3.07e-86FFCP PHASE2:Mm9::chr9:92087990..92087995,+#_226491ab2d1222970ccaee28dec49830p3@Plscr5
3.07e-86FFCP PHASE2:Mm9::chr6:36966723..36966734,-#_226491ab2d1222970ccaee28dec49830p@chr6:36966723..36966734, -
3.07e-86FFCP PHASE2:Mm9::chr10:18246142..18246145,+#_226491ab2d1222970ccaee28dec49830p@chr10:18246142..18246145, +
3.07e-86FFCP PHASE1:Mm9::chr11:94371110..94371111,-#_226491ab2d1222970ccaee28dec49830p@chr11:94371110..94371111, -
3.07e-86FFCP PHASE1:Mm9::chr15:91379135..91379143,-#_226491ab2d1222970ccaee28dec49830p@chr15:91379135..91379143, -
3.07e-86FFCP PHASE2:Mm9::chr5:72652671..72652676,+#_226491ab2d1222970ccaee28dec49830p@chr5:72652671..72652676, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684692..64684697,+#_226491ab2d1222970ccaee28dec49830p@chr6:64684692..64684697, +
3.07e-86FFCP PHASE2:Mm9::chr17:34185389..34185401,+#_226491ab2d1222970ccaee28dec49830p8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr2:142907424..142907448,-#_226491ab2d1222970ccaee28dec49830p@chr2:142907424..142907448, -
3.07e-86FFCP PHASE1:Mm9::chr16:55283394..55283400,-#_226491ab2d1222970ccaee28dec49830p1@Zpld1
3.07e-86FFCP PHASE2:Mm9::chr11:114652018..114652020,+#_226491ab2d1222970ccaee28dec49830p@chr11:114652018..114652020, +
3.07e-86FFCP PHASE2:Mm9::chr2:142906965..142906982,-#_226491ab2d1222970ccaee28dec49830p@chr2:142906965..142906982, -
3.07e-86FFCP PHASE2:Mm9::chr6:64684505..64684512,+#_226491ab2d1222970ccaee28dec49830p@chr6:64684505..64684512, +
3.07e-86FFCP PHASE2:Mm9::chr6:36966993..36966996,-#_226491ab2d1222970ccaee28dec49830p@chr6:36966993..36966996, -
3.07e-86FFCP PHASE2:Mm9::chr9:87599703..87599714,-#_226491ab2d1222970ccaee28dec49830p@chr9:87599703..87599714, -
3.07e-86FFCP PHASE1:Mm9::chr19:10535924..10535927,-#_226491ab2d1222970ccaee28dec49830p@chr19:10535924..10535927, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185343..34185356,+#_226491ab2d1222970ccaee28dec49830p7@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr11:94371110..94371111,-#_226491ab2d1222970ccaee28dec49830p@chr11:94371110..94371111, -
3.07e-86FFCP PHASE2:Mm9::chr19:10535924..10535927,-#_226491ab2d1222970ccaee28dec49830p@chr19:10535924..10535927, -
3.07e-86FFCP PHASE2:Mm9::chr17:15466888..15466898,-#_226491ab2d1222970ccaee28dec49830p@chr17:15466888..15466898, -
3.07e-86FFCP PHASE1:Mm9::chr6:83129695..83129696,+#_226491ab2d1222970ccaee28dec49830p24@Dctn1
3.07e-86FFCP PHASE1:Mm9::chr4:106770202..106770208,+#_226491ab2d1222970ccaee28dec49830p@chr4:106770202..106770208, +
3.07e-86FFCP PHASE2:Mm9::chr18:66033513..66033517,-#_226491ab2d1222970ccaee28dec49830p@chr18:66033513..66033517, -
3.07e-86FFCP PHASE1:Mm9::chr9:92087990..92087995,+#_226491ab2d1222970ccaee28dec49830p3@Plscr5
3.07e-86FFCP PHASE2:Mm9::chr15:91379135..91379143,-#_226491ab2d1222970ccaee28dec49830p@chr15:91379135..91379143, -
3.07e-86FFCP PHASE2:Mm9::chr2:142907424..142907448,-#_226491ab2d1222970ccaee28dec49830p@chr2:142907424..142907448, -
3.07e-86FFCP PHASE1:Mm9::chr15:97828021..97828028,-#_226491ab2d1222970ccaee28dec49830p@chr15:97828021..97828028, -
3.07e-86FFCP PHASE2:Mm9::chr6:64684637..64684654,+#_226491ab2d1222970ccaee28dec49830p@chr6:64684637..64684654, +
3.07e-86FFCP PHASE1:Mm9::chr8:94283075..94283082,+#_226491ab2d1222970ccaee28dec49830p@chr8:94283075..94283082, +
3.07e-86FFCP PHASE1:Mm9::chr2:12032746..12032751,-#_226491ab2d1222970ccaee28dec49830p@chr2:12032746..12032751, -
3.07e-86FFCP PHASE2:Mm9::chr17:34185343..34185356,+#_226491ab2d1222970ccaee28dec49830p7@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr17:34185362..34185370,+#_226491ab2d1222970ccaee28dec49830p10@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr17:15466888..15466898,-#_226491ab2d1222970ccaee28dec49830p@chr17:15466888..15466898, -
3.07e-86FFCP PHASE1:Mm9::chr13:31171742..31171745,-#_226491ab2d1222970ccaee28dec49830p@chr13:31171742..31171745, -
3.07e-86FFCP PHASE2:Mm9::chr8:94283075..94283082,+#_226491ab2d1222970ccaee28dec49830p@chr8:94283075..94283082, +
2.74e-44FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_1144a0c613541f30449e34f02cb67b7cp@chr16:93971357..93971363, -
2.74e-44FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_1144a0c613541f30449e34f02cb67b7cp@chr18:66033526..66033539, -
2.74e-44FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_1144a0c613541f30449e34f02cb67b7cp@chr1:172843796..172843799, -
2.74e-44FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_1144a0c613541f30449e34f02cb67b7cp@chr17:13983102..13983126, +
2.74e-44FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_1144a0c613541f30449e34f02cb67b7cp@chr2:75320183..75320189, +
2.74e-44FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_1144a0c613541f30449e34f02cb67b7cp@chr1:16651649..16651655, +
2.74e-44FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_1144a0c613541f30449e34f02cb67b7cp6@Fam70b
2.74e-44FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_1144a0c613541f30449e34f02cb67b7cp@chr6:113251614..113251623, +
2.74e-44FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_1144a0c613541f30449e34f02cb67b7cp@chr7:141605556..141605563, -
2.74e-44FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_1144a0c613541f30449e34f02cb67b7cp2@Strc
2.74e-44FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_1144a0c613541f30449e34f02cb67b7cp41@Cacnb2
2.74e-44FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_1144a0c613541f30449e34f02cb67b7cp@chr13:78257518..78257522, +
2.74e-44FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_1144a0c613541f30449e34f02cb67b7cp@chr2:152453066..152453075, -
2.74e-44FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_1144a0c613541f30449e34f02cb67b7cp@chr4:154208086..154208123, +
2.74e-44FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_1144a0c613541f30449e34f02cb67b7cp@chr12:13508046..13508055, +
2.74e-44FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_1144a0c613541f30449e34f02cb67b7cp@chr18:81327205..81327211, +
2.74e-44FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_1144a0c613541f30449e34f02cb67b7cp@chr5:3909290..3909299, +
2.74e-44FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_1144a0c613541f30449e34f02cb67b7cp@chr12:13572961..13572974, +
2.74e-44FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_1144a0c613541f30449e34f02cb67b7cp2@Slc26a5
2.74e-44FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_1144a0c613541f30449e34f02cb67b7cp@chr3:154693281..154693317, -
2.74e-44FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_1144a0c613541f30449e34f02cb67b7cp2@Tmprss3
2.74e-44FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_1144a0c613541f30449e34f02cb67b7cp2@Tmprss3
2.74e-44FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_1144a0c613541f30449e34f02cb67b7cp@chr5:147854240..147854249, -
2.74e-44FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_1144a0c613541f30449e34f02cb67b7cp1@Kcna10
2.74e-44FFCP PHASE1:Mm9::chr13:31877112..31877122,+#_1144a0c613541f30449e34f02cb67b7cp@chr13:31877112..31877122, +
2.74e-44FFCP PHASE2:Mm9::chr17:66272852..66272855,-#_1144a0c613541f30449e34f02cb67b7cp@chr17:66272852..66272855, -
2.74e-44FFCP PHASE2:Mm9::chr8:79834836..79834846,-#_1144a0c613541f30449e34f02cb67b7cp@chr8:79834836..79834846, -
2.74e-44FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_1144a0c613541f30449e34f02cb67b7cp@chr15:89215319..89215330, +
2.74e-44FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_1144a0c613541f30449e34f02cb67b7cp1@Grxcr1
2.74e-44FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_1144a0c613541f30449e34f02cb67b7cp1@Gm1322
2.74e-44FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_1144a0c613541f30449e34f02cb67b7cp@chr17:13983102..13983126, +
2.74e-44FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_1144a0c613541f30449e34f02cb67b7cp@chr15:12848147..12848162, +
2.74e-44FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_1144a0c613541f30449e34f02cb67b7cp@chr7:141605556..141605563, -
2.74e-44FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_1144a0c613541f30449e34f02cb67b7cp@chr18:42158627..42158630, -
2.74e-44FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_1144a0c613541f30449e34f02cb67b7cp@chr1:182528371..182528385, +
2.74e-44FFCP PHASE2:Mm9::chr14:47293487..47293493,-#_1144a0c613541f30449e34f02cb67b7cp@chr14:47293487..47293493, -
2.74e-44FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_1144a0c613541f30449e34f02cb67b7cp@chr18:42158627..42158630, -
2.74e-44FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_1144a0c613541f30449e34f02cb67b7cp@chr1:93235228..93235249, +