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Revision as of 08:36, 15 June 2012

Name:absorptive cell
Namespace:cell
Definition:"A cell that takes up and metabolizes substances." [CL:CVS]


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000144()



Children


is a:CL:0000677 (gut absorptive cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 11848-124I3 (CD326+ enterocyte, pool1)
  • 11849-124I4 (CD326+ enterocyte, pool2)
  • 11850-124I5 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1)
  • 11851-124I6 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2)
  • 11852-124I7 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1)
  • 11853-124I8 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2)

Mouse (Mus musculus)

  • 11848-124I3 (CD326+ enterocyte, pool1)
  • 11849-124I4 (CD326+ enterocyte, pool2)
  • 11850-124I5 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1)
  • 11851-124I6 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2)
  • 11852-124I7 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1)
  • 11853-124I8 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000212 (absorptive cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results for this cluster