CL:0000244
From FANTOM5_SSTAR
Name: | transitional epithelial cell | ||
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Namespace: | FANTOM | ||
Definition: | "A cell characteristically found lining hollow organs that are subject to great mechanical change due to contraction and distention; originally thought to represent a transition between stratified squamous and columnar epithelium." [GOC:tfm, ISBN:0721662544] | ||
Xrefs: |
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Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.
link to ontology dataset
data
Parents
is_a: | CL:0000066(epithelial cell),CL:0002371(somatic cell) |
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Children
is a: | CL:0000731 (urothelial cell) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11216-116B1 (Urothelial cells, donor0)
- 11520-119H8 (Urothelial Cells, donor1)
- 11600-120H7 (Urothelial Cells, donor2)
- 11681-122H7 (Urothelial Cells, donor3)
Mouse (Mus musculus)
- 11216-116B1 (Urothelial cells, donor0)
- 11520-119H8 (Urothelial Cells, donor1)
- 11600-120H7 (Urothelial Cells, donor2)
- 11681-122H7 (Urothelial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000244 (transitional epithelial cell), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
8.31e-99 | FFCP PHASE2:Hg19::chr10:124050511..124050520,+#_609df7436b8a002567bcd82c1d0dd8ac | p9@BTBD16 |
8.31e-99 | FFCP PHASE1:Hg19::chr10:124050511..124050520,+#_609df7436b8a002567bcd82c1d0dd8ac | p9@BTBD16 |
7.02e-88 | FFCP PHASE2:Hg19::chr10:124050568..124050578,+#_858ba46728ddc331dec5260b5c26cff9 | p6@BTBD16 |
7.02e-88 | FFCP PHASE1:Hg19::chr10:124050568..124050578,+#_858ba46728ddc331dec5260b5c26cff9 | p6@BTBD16 |
6.32e-80 | FFCP PHASE1:Hg19::chr12:28125967..28125978,-#_4f426c9fe6e31229bf3e8aa6552f00f6 | p16@PTHLH |
6.32e-80 | FFCP PHASE2:Hg19::chr12:28125967..28125978,-#_4f426c9fe6e31229bf3e8aa6552f00f6 | p16@PTHLH |
1.16e-79 | FFCP PHASE2:Hg19::chr5:61213179..61213189,-#_17ea11fbfe64f63f2096ec2e5255238d | p@chr5:61213179..61213189, - |
1.16e-79 | FFCP PHASE1:Hg19::chr5:61213179..61213189,-#_17ea11fbfe64f63f2096ec2e5255238d | -, p@chr5:61213179..61213189 |
3.32e-74 | FFCP PHASE2:Hg19::chrX:102977640..102977644,-#_54baad3d7b9d3f71acc53700048ca117 | p@chrX:102977640..102977644, - |
3.32e-74 | FFCP PHASE1:Hg19::chrX:102977640..102977644,-#_54baad3d7b9d3f71acc53700048ca117 | p@chrX:102977640..102977644, - |
4.26e-74 | FFCP PHASE2:Hg19::chr9:27524417..27524425,+#_d73fef576312ea22cb8abfe474f583f2 | p4@IFNK |
4.26e-74 | FFCP PHASE1:Hg19::chr9:27524417..27524425,+#_d73fef576312ea22cb8abfe474f583f2 | p4@IFNK |
2.23e-72 | FFCP PHASE1:Hg19::chr1:40492754..40492762,+#_de84605926027f731185b3a983c646f9 | p@chr1:40492754..40492762, + |
2.23e-72 | FFCP PHASE2:Hg19::chr1:40492754..40492762,+#_de84605926027f731185b3a983c646f9 | p@chr1:40492754..40492762, + |
2.68e-72 | FFCP PHASE1:Hg19::chr10:3954276..3954287,+#_43b63565bcb5a04831db711bffc17e50 | p@chr10:3954276..3954287, + |
2.68e-72 | FFCP PHASE2:Hg19::chr10:3954276..3954287,+#_43b63565bcb5a04831db711bffc17e50 | p@chr10:3954276..3954287, + |
3.47e-67 | FFCP PHASE1:Hg19::chr12:28125953..28125964,-#_67860149cc6e8e2f28c2b68e98e6c3f9 | p17@PTHLH |
3.47e-67 | FFCP PHASE2:Hg19::chr12:28125953..28125964,-#_67860149cc6e8e2f28c2b68e98e6c3f9 | p17@PTHLH |
2.4e-66 | FFCP PHASE2:Hg19::chr8:141728731..141728740,-#_ddc3a03b5cfeddffc85bf577251c52ee | p38@PTK2 |
2.4e-66 | FFCP PHASE1:Hg19::chr8:141728731..141728740,-#_ddc3a03b5cfeddffc85bf577251c52ee | p38@PTK2 |
2.61e-64 | FFCP PHASE1:Hg19::chr5:61213127..61213133,-#_28bd00aa61416a8e496ec86de6c7e9cf | p@chr5:61213127..61213133, - |
2.61e-64 | FFCP PHASE2:Hg19::chr5:61213127..61213133,-#_28bd00aa61416a8e496ec86de6c7e9cf | p@chr5:61213127..61213133, - |
7.67e-64 | FFCP PHASE1:Hg19::chr21:44168074..44168079,+#_d265504237023e7769656a8642e1eeb3 | p@chr21:44168074..44168079, + |
7.67e-64 | FFCP PHASE2:Hg19::chr21:44168074..44168079,+#_d265504237023e7769656a8642e1eeb3 | p@chr21:44168074..44168079, + |
1.18e-63 | FFCP PHASE2:Hg19::chr4:125341514..125341526,-#_a71386fc7633cfff69897874ce36c428 | p@chr4:125341514..125341526, - |
1.18e-63 | FFCP PHASE1:Hg19::chr4:125341514..125341526,-#_a71386fc7633cfff69897874ce36c428 | p@chr4:125341514..125341526, - |
1.67e-61 | FFCP PHASE2:Hg19::chr10:127763979..127763984,+#_6bc5a18aeb69fb0a88a22c13ba8072e4 | p@chr10:127763979..127763984, + |
1.67e-61 | FFCP PHASE1:Hg19::chr10:127763979..127763984,+#_6bc5a18aeb69fb0a88a22c13ba8072e4 | p@chr10:127763979..127763984, + |
1.06e-56 | FFCP PHASE1:Hg19::chr11:127965855..127965866,+#_160208c6c2c632d3ede4fad417cf82b5 | p@chr11:127965855..127965866, + |
1.06e-56 | FFCP PHASE2:Hg19::chr11:127965855..127965866,+#_160208c6c2c632d3ede4fad417cf82b5 | p@chr11:127965855..127965866, + |
1.64e-56 | FFCP PHASE2:Hg19::chr19:15065111..15065171,-#_f9658674d86f04adb687cba2211d03a3 | p@chr19:15065111..15065171, - |
1.64e-56 | FFCP PHASE1:Hg19::chr19:15065111..15065171,-#_f9658674d86f04adb687cba2211d03a3 | p@chr19:15065111..15065171, - |
4.09e-54 | FFCP PHASE2:Hg19::chr10:124050535..124050566,+#_57010f4383a912d08a65c47e27144c11 | p3@BTBD16 |
4.09e-54 | FFCP PHASE1:Hg19::chr10:124050535..124050566,+#_57010f4383a912d08a65c47e27144c11 | p3@BTBD16 |
1.81e-53 | FFCP PHASE2:Hg19::chr6:151358048..151358060,+#_50497459846ae12225c7c6c6413cd443 | p13@MTHFD1L |
1.81e-53 | FFCP PHASE1:Hg19::chr6:151358048..151358060,+#_50497459846ae12225c7c6c6413cd443 | p13@MTHFD1L |
7.95e-53 | FFCP PHASE2:Hg19::chr7:2019948..2019961,-#_8105c6b559777fef179b6b755815b084 | p@chr7:2019948..2019961, - |
7.95e-53 | FFCP PHASE1:Hg19::chr7:2019948..2019961,-#_8105c6b559777fef179b6b755815b084 | p@chr7:2019948..2019961, - |
1.07e-50 | FFCP PHASE1:Hg19::chr7:150813498..150813509,+#_94a4911fb33e1d880b83713ee034c449 | p30@AGAP3 |
1.07e-50 | FFCP PHASE2:Hg19::chr7:150813498..150813509,+#_94a4911fb33e1d880b83713ee034c449 | p30@AGAP3 |
1.21e-50 | FFCP PHASE1:Hg19::chr2:31560793..31560814,-#_2e158ba17e66105ce80d03266c6874e6 | p@chr2:31560793..31560814, - |
1.21e-50 | FFCP PHASE2:Hg19::chr2:31560793..31560814,-#_2e158ba17e66105ce80d03266c6874e6 | p@chr2:31560793..31560814, - |
2.23e-50 | FFCP PHASE1:Hg19::chr13:20934450..20934456,+#_c711b08b9d0ba76dc8f7d872e3821874 | p@chr13:20934450..20934456, + |
2.23e-50 | FFCP PHASE2:Hg19::chr13:20934450..20934456,+#_c711b08b9d0ba76dc8f7d872e3821874 | p@chr13:20934450..20934456, + |
5.14e-50 | FFCP PHASE1:Hg19::chr14:85935018..85935023,-#_ba406d4affbaa43bc7b8b63d0c5dc52a | p@chr14:85935018..85935023, - |
5.14e-50 | FFCP PHASE2:Hg19::chr14:85935018..85935023,-#_ba406d4affbaa43bc7b8b63d0c5dc52a | p@chr14:85935018..85935023, - |
6.6e-50 | FFCP PHASE2:Hg19::chr9:21564382..21564387,-#_0524b5f60ef3b2dbbd26048b2f386db0 | -, p@chr9:21564382..21564387 |
6.6e-50 | FFCP PHASE1:Hg19::chr9:113802868..113802878,-#_0524b5f60ef3b2dbbd26048b2f386db0 | p@chr9:113802868..113802878, - |
6.6e-50 | FFCP PHASE2:Hg19::chr9:113802868..113802878,-#_0524b5f60ef3b2dbbd26048b2f386db0 | p@chr9:113802868..113802878, - |
6.6e-50 | FFCP PHASE1:Hg19::chr9:21564382..21564387,-#_0524b5f60ef3b2dbbd26048b2f386db0 | p@chr9:21564382..21564387, - |
8.47e-50 | FFCP PHASE2:Hg19::chr19:43965689..43965700,-#_50f652efae485eaaa16c5d288ec53463 | p@chr19:43965689..43965700, - |
8.47e-50 | FFCP PHASE1:Hg19::chr19:43965689..43965700,-#_50f652efae485eaaa16c5d288ec53463 | p@chr19:43965689..43965700, - |
1.41e-49 | FFCP PHASE2:Hg19::chr14:51956090..51956101,+#_13ebc93352b065d47e0afea4a55641c6 | p32@FRMD6 |
1.41e-49 | FFCP PHASE1:Hg19::chr14:51956090..51956101,+#_13ebc93352b065d47e0afea4a55641c6 | p32@FRMD6 |
5.41e-48 | FFCP PHASE1:Hg19::chr21:45020721..45020728,-#_c45ef719d13a042a598bc6894540d238 | p@chr21:45020721..45020728, - |
5.41e-48 | FFCP PHASE2:Hg19::chr21:45020721..45020728,-#_c45ef719d13a042a598bc6894540d238 | -, p@chr21:45020721..45020728 |
8.73e-48 | FFCP PHASE2:Hg19::chr8:143814087..143814102,-#_395a6bbf04d5bcd264166da97f74012f | p@chr8:143814087..143814102, - |
8.73e-48 | FFCP PHASE1:Hg19::chr8:143814087..143814102,-#_395a6bbf04d5bcd264166da97f74012f | p@chr8:143814087..143814102, - |
2.66e-45 | FFCP PHASE1:Hg19::chr1:183192299..183192310,+#_b06aa7aec7c03905f95f5ee007eed696 | p@chr1:183192299..183192310, + |
2.66e-45 | FFCP PHASE2:Hg19::chr1:183192299..183192310,+#_b06aa7aec7c03905f95f5ee007eed696 | p@chr1:183192299..183192310, + |
3.1e-45 | FFCP PHASE1:Hg19::chr4:125341479..125341498,-#_de53bc5598ae5ff62594deba1f9c1515 | p@chr4:125341479..125341498, - |
3.1e-45 | FFCP PHASE2:Hg19::chr2:20402306..20402318,-#_de53bc5598ae5ff62594deba1f9c1515 | p@chr2:20402306..20402318, - |
3.1e-45 | FFCP PHASE2:Hg19::chr4:125341479..125341498,-#_de53bc5598ae5ff62594deba1f9c1515 | p@chr4:125341479..125341498, - |
3.1e-45 | FFCP PHASE1:Hg19::chr2:20402306..20402318,-#_de53bc5598ae5ff62594deba1f9c1515 | p@chr2:20402306..20402318, - |
4.87e-45 | FFCP PHASE2:Hg19::chr9:27524537..27524559,+#_6f5f34b0b246b701308110dc85a4b2ec | p1@IFNK |
4.87e-45 | FFCP PHASE1:Hg19::chr9:27524537..27524559,+#_6f5f34b0b246b701308110dc85a4b2ec | p1@IFNK |
5.66e-45 | FFCP PHASE2:Hg19::chr13:20805611..20805619,-#_047aed3c2ed4e9f4cdef0274562b7e0e | p6@GJB6 |
5.66e-45 | FFCP PHASE1:Hg19::chr13:20805611..20805619,-#_047aed3c2ed4e9f4cdef0274562b7e0e | p6@GJB6 |
5.66e-45 | FFCP PHASE1:Hg19::chr1:99387558..99387571,-#_047aed3c2ed4e9f4cdef0274562b7e0e | p@chr1:99387558..99387571, - |
5.66e-45 | FFCP PHASE2:Hg19::chr1:99387558..99387571,-#_047aed3c2ed4e9f4cdef0274562b7e0e | p@chr1:99387558..99387571, - |
1.56e-43 | FFCP PHASE2:Hg19::chr10:124050485..124050505,+#_467cdade7fc2592dec97deaf8512253b | p2@BTBD16 |
1.56e-43 | FFCP PHASE1:Hg19::chr10:124050485..124050505,+#_467cdade7fc2592dec97deaf8512253b | p2@BTBD16 |
1.27e-41 | FFCP PHASE2:Hg19::chr1:183212642..183212654,+#_f3f211c9f3b819eff2728becf7b50898 | p@chr1:183212642..183212654, + |
1.27e-41 | FFCP PHASE1:Hg19::chr1:183212642..183212654,+#_f3f211c9f3b819eff2728becf7b50898 | p@chr1:183212642..183212654, + |
2.53e-41 | FFCP PHASE1:Hg19::chr5:149877396..149877405,+#_fad72b185a6222c7b81e115275e5c7fb | p19@NDST1 |
2.53e-41 | FFCP PHASE1:Hg19::chr6:44096519..44096530,-#_fad72b185a6222c7b81e115275e5c7fb | p@chr6:44096519..44096530, - |
2.53e-41 | FFCP PHASE2:Hg19::chr5:149877396..149877405,+#_fad72b185a6222c7b81e115275e5c7fb | p19@NDST1 |
2.53e-41 | FFCP PHASE2:Hg19::chr6:44096519..44096530,-#_fad72b185a6222c7b81e115275e5c7fb | p@chr6:44096519..44096530, - |
2.79e-41 | FFCP PHASE2:Hg19::chr13:20762566..20762577,-#_8d05fe5f12d50a26ce41fc1d9e840377 | p@chr13:20762566..20762577, - |
2.79e-41 | FFCP PHASE1:Hg19::chr13:20762566..20762577,-#_8d05fe5f12d50a26ce41fc1d9e840377 | p@chr13:20762566..20762577, - |
7.76e-41 | FFCP PHASE2:Hg19::chr5:146263947..146263959,-#_f9f4bab6535566951ca876e44950a789 | p@chr5:146263947..146263959, - |
7.76e-41 | FFCP PHASE1:Hg19::chr5:146263947..146263959,-#_f9f4bab6535566951ca876e44950a789 | p@chr5:146263947..146263959, - |
1.75e-40 | FFCP PHASE2:Hg19::chr1:183204832..183204840,+#_81344674af14a6462fb888afbc6b60fd | p@chr1:183204832..183204840, + |
1.75e-40 | FFCP PHASE1:Hg19::chr1:183204832..183204840,+#_81344674af14a6462fb888afbc6b60fd | p@chr1:183204832..183204840, + |
1.81e-40 | FFCP PHASE2:Hg19::chr21:39628993..39628998,+#_5d28b5a9e71b2b34c75eceab98b07686 | p25@KCNJ15 |
1.81e-40 | FFCP PHASE1:Hg19::chr21:39628993..39628998,+#_5d28b5a9e71b2b34c75eceab98b07686 | p25@KCNJ15 |
4.05e-40 | FFCP PHASE1:Hg19::chr2:31560770..31560779,-#_e33bb7e92fdf29007a999a07a55c7d88 | p@chr2:31560770..31560779, - |
4.05e-40 | FFCP PHASE2:Hg19::chr2:31560770..31560779,-#_e33bb7e92fdf29007a999a07a55c7d88 | p@chr2:31560770..31560779, - |
1.54e-39 | FFCP PHASE1:Hg19::chr10:3954241..3954256,+#_5d5e186b3f437255718df429932cf2b5 | p@chr10:3954241..3954256, + |
1.54e-39 | FFCP PHASE2:Hg19::chr10:3954241..3954256,+#_5d5e186b3f437255718df429932cf2b5 | p@chr10:3954241..3954256, + |
1.44e-38 | FFCP PHASE2:Hg19::chr1:183204785..183204796,+#_76e1a39402cca785bd71b2dade019feb | p@chr1:183204785..183204796, + |
1.44e-38 | FFCP PHASE1:Hg19::chr1:183204785..183204796,+#_76e1a39402cca785bd71b2dade019feb | p@chr1:183204785..183204796, + |
5.23e-38 | FFCP PHASE2:Hg19::chr3:52083895..52083904,-#_6665582fd091c71ff0cbbe0d3489870c | p21@DUSP7 |
5.23e-38 | FFCP PHASE1:Hg19::chr3:52083895..52083904,-#_6665582fd091c71ff0cbbe0d3489870c | p21@DUSP7 |
6.73e-38 | FFCP PHASE2:Hg19::chr1:183205712..183205723,+#_0b8cc8c5bad0fa29072f649d58dd5719 | p@chr1:183205712..183205723, + |
6.73e-38 | FFCP PHASE1:Hg19::chr1:183205712..183205723,+#_0b8cc8c5bad0fa29072f649d58dd5719 | p@chr1:183205712..183205723, + |
7.63e-38 | FFCP PHASE1:Hg19::chr2:43266741..43266748,-#_a7247a611ce8523ef6d5b89364398db5 | p2@ENST00000449766 |
7.63e-38 | FFCP PHASE2:Hg19::chr2:43266741..43266748,-#_a7247a611ce8523ef6d5b89364398db5 | p2@ENST00000449766 |
2.18e-37 | FFCP PHASE2:Hg19::chr13:20763282..20763295,-#_432ccf604c46ce0efe980092c2175238 | p6@GJB2 |
2.18e-37 | FFCP PHASE1:Hg19::chr13:20763282..20763295,-#_432ccf604c46ce0efe980092c2175238 | p6@GJB2 |