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{{CL
 
{{CL
−
|id=CL:0000738
+
|alt_id=
−
|name=leukocyte
 
−
|namespace=cell;;efo
 
−
|def="An achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue." [GOC:add, GOC:tfm, ISBN:978-0-323-05290-0]
 
−
|xref=BTO:0000751;;FMA:62852
 
−
|is_a=CL:0000219;;CL:0000988
 
−
|synonym="immune cell" EXACT [];;"leucocyte" EXACT [];;"white blood cell" EXACT []
 
 
|comment=
 
|comment=
−
|alt_id=
 
−
|disjoint_from=
 
−
|union_of=
 
 
|created_by=
 
|created_by=
−
|obo_creation_date=
+
|def="An achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue." [GOC:add, GOC:tfm, ISBN:978-0-323-05290-0]
−
|subset=
 
 
|derives_from=
 
|derives_from=
 
|develops_from=CL:0000037
 
|develops_from=CL:0000037
 +
|disjoint_from=
 
|has_quality=
 
|has_quality=
 +
|id=CL:0000738
 +
|is_a=CL:0000219 ;;CL:0000988
 +
|is_obsolete=
 
|located_in=
 
|located_in=
−
|part_of=
+
|name=leukocyte
 +
|namespace=cell;;efo
 +
|obo_creation_date=
 +
|part_of=UBERON:0002405
 +
|preceded_by=
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
−
|is_obsolete=
+
|subset=
−
|preceded_by=
+
|synonym="immune cell" EXACT [];;"leucocyte" EXACT [];;"white blood cell" EXACT []
 +
|union_of=
 +
|xref=BTO:0000751;;FMA:62852
 
}}
 
}}

Revision as of 01:20, 12 September 2014

Name:leukocyte
Namespace:cell;;efo
Definition:"An achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue." [GOC:add, GOC:tfm, ISBN:978-0-323-05290-0]
Xrefs:
links:

BTO:0000751

FMA:62852
Synonyms: "immune cell" EXACT []
"leucocyte" EXACT []
"white blood cell" EXACT []


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data

Parents

is_a:CL:0000219(motile cell),CL:0000988(hematopoietic cell)
develops_from:CL:0000037(hematopoietic stem cell)
part_of:UBERON:0002405(immune system)



Children


is a:CL:0000451 (dendritic cell),CL:0000766 (myeloid leukocyte),CL:0002087 (nongranular leukocyte)
derives from:FF:0104973 (Hodgkin lymphoma cell line sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
  • 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
  • 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
  • 10416-106C2 (chronic lymphocytic leukemia (T-CLL) cell line:SKW-3)
  • 10421-106C7 (adult T-cell leukemia cell line:ATN-1)
  • 10422-106C8 (Burkitt's lymphoma cell line:DAUDI)
  • 10427-106D4 (b cell line:RPMI1788)
  • 10429-106D6 (acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL)
  • 10435-106E3 (Hodgkin's lymphoma cell line:HD-Mar2)
  • 10455-106G5 (acute lymphoblastic leukemia (B-ALL) cell line:BALL-1)

... further results Mouse (Mus musculus)

  • 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
  • 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
  • 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
  • 10416-106C2 (chronic lymphocytic leukemia (T-CLL) cell line:SKW-3)
  • 10421-106C7 (adult T-cell leukemia cell line:ATN-1)
  • 10422-106C8 (Burkitt's lymphoma cell line:DAUDI)
  • 10427-106D4 (b cell line:RPMI1788)
  • 10429-106D6 (acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL)
  • 10435-106E3 (Hodgkin's lymphoma cell line:HD-Mar2)
  • 10455-106G5 (acute lymphoblastic leukemia (B-ALL) cell line:BALL-1)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000738 (leukocyte), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
6.79e-110FFCP PHASE1:Hg19::chr1:206730535..206730549,+#_220fc651e91be1e5fa73d8c3062f53dbp4@RASSF5
6.79e-110FFCP PHASE2:Hg19::chr1:206730535..206730549,+#_220fc651e91be1e5fa73d8c3062f53dbp4@RASSF5
2.26e-109FFCP PHASE2:Hg19::chr1:203256483..203256503,-#_668d6f1d3d810764d1b007918f7166c7p@chr1:203256483..203256503, -
2.26e-109FFCP PHASE1:Hg19::chr1:203256483..203256503,-#_668d6f1d3d810764d1b007918f7166c7p@chr1:203256483..203256503, -
5.29e-108FFCP PHASE1:Hg19::chr2:68592394..68592405,+#_2ae36b4f2aa1eee7c15716f8e42f9c1cp2@PLEK
5.29e-108FFCP PHASE2:Hg19::chr2:68592394..68592405,+#_2ae36b4f2aa1eee7c15716f8e42f9c1cp2@PLEK
1.08e-107FFCP PHASE2:Hg19::chr13:41593392..41593403,-#_002802208359386d00e55e0a52b4dca4p7@ELF1
1.08e-107FFCP PHASE1:Hg19::chr13:41593392..41593403,-#_002802208359386d00e55e0a52b4dca4p7@ELF1
3.21e-107FFCP PHASE1:Hg19::chr19:49842010..49842054,+#_cd00ca476dfc29a4961eaff07dfa7e03p@chr19:49842010..49842054, +
3.21e-107FFCP PHASE2:Hg19::chr19:49842010..49842054,+#_cd00ca476dfc29a4961eaff07dfa7e03p@chr19:49842010..49842054, +
5.93e-107FFCP PHASE2:Hg19::chr2:24149046..24149063,+#_e893a1058b6547f69107431c9138c851p@chr2:24149046..24149063, +
5.93e-107FFCP PHASE1:Hg19::chr2:24149046..24149063,+#_e893a1058b6547f69107431c9138c851p@chr2:24149046..24149063, +
1.93e-106FFCP PHASE1:Hg19::chr13:41593405..41593416,-#_5b1062665302e0f982f9f122bece61f4p9@ELF1
1.93e-106FFCP PHASE2:Hg19::chr13:41593405..41593416,-#_5b1062665302e0f982f9f122bece61f4p9@ELF1
5.83e-106FFCP PHASE1:Hg19::chr1:203256822..203256845,+#_eaac8e6cec79f73b305d83819551130cp1@ENST00000433008
5.83e-106FFCP PHASE2:Hg19::chr1:203256822..203256845,+#_eaac8e6cec79f73b305d83819551130cp1@ENST00000433008
7.74e-106FFCP PHASE2:Hg19::chr17:6917862..6917879,-#_bc1bc4f9b699fa90dcd7b8d8f493d425p1@AF161372
7.74e-106FFCP PHASE1:Hg19::chr17:6917862..6917879,-#_bc1bc4f9b699fa90dcd7b8d8f493d425p1@AF161372
2.31e-105FFCP PHASE1:Hg19::chr19:2085302..2085320,-#_b56c4162fc33068722b53d1fe4d7ce4ap3@MOB3A
2.31e-105FFCP PHASE2:Hg19::chr19:2085302..2085320,-#_b56c4162fc33068722b53d1fe4d7ce4ap3@MOB3A
8.43e-105FFCP PHASE2:Hg19::chr2:163175430..163175460,-#_986b4c1febf091809d583c1901e2fb52p2@IFIH1
8.43e-105FFCP PHASE1:Hg19::chr2:163175430..163175460,-#_986b4c1febf091809d583c1901e2fb52p2@IFIH1
9.45e-105FFCP PHASE1:Hg19::chr2:158300487..158300500,-#_8f86b396982a60957cf12a364b0836c0p3@CYTIP
9.45e-105FFCP PHASE2:Hg19::chr2:158300487..158300500,-#_8f86b396982a60957cf12a364b0836c0p3@CYTIP
2.82e-104FFCP PHASE2:Hg19::chr15:73075463..73075507,+#_e0d506016fd7b439a309d5def3fe758cp1@LOC100287559
2.82e-104FFCP PHASE1:Hg19::chr15:73075463..73075507,+#_e0d506016fd7b439a309d5def3fe758cp1@LOC100287559
5.87e-103FFCP PHASE1:Hg19::chr17:36857970..36858038,+#_9424a225d310f57b6a7b263076645fbd+, p@chr17:36857970..36858038
5.87e-103FFCP PHASE2:Hg19::chr17:36857970..36858038,+#_9424a225d310f57b6a7b263076645fbdp@chr17:36857970..36858038, +
8.39e-103FFCP PHASE2:Hg19::chr1:31206575..31206590,-#_d310711eb9918fc8b73e9198feb9ef31p@chr1:31206575..31206590, -
8.39e-103FFCP PHASE1:Hg19::chr1:31206575..31206590,-#_d310711eb9918fc8b73e9198feb9ef31p@chr1:31206575..31206590, -
1.11e-102FFCP PHASE1:Hg19::chr2:61110364..61110387,-#_7d679d946fd65df6ead20844d6a1025cp@chr2:61110364..61110387, -
1.11e-102FFCP PHASE2:Hg19::chr2:61110364..61110387,-#_7d679d946fd65df6ead20844d6a1025cp@chr2:61110364..61110387, -
1.78e-102FFCP PHASE1:Hg19::chr22:18260077..18260127,+#_a97aa015e1a31e57ff42c5d9c2fb567cp1@LINC00528
1.78e-102FFCP PHASE2:Hg19::chr22:18260077..18260127,+#_a97aa015e1a31e57ff42c5d9c2fb567cp1@LINC00528
3.75e-102FFCP PHASE2:Hg19::chr5:100236376..100236391,-#_05e2c4a25c1ab4ab911ea90e41483b6dp@chr5:100236376..100236391, -
3.75e-102FFCP PHASE1:Hg19::chr5:100236376..100236391,-#_05e2c4a25c1ab4ab911ea90e41483b6dp@chr5:100236376..100236391, -
5.82e-102FFCP PHASE2:Hg19::chr19:49842573..49842602,+#_fe072878b67a4c7b281ad1437359e8b4p@chr19:49842573..49842602, +
5.82e-102FFCP PHASE1:Hg19::chr19:49842573..49842602,+#_fe072878b67a4c7b281ad1437359e8b4p@chr19:49842573..49842602, +
7.87e-102FFCP PHASE1:Hg19::chr19:49843537..49843640,+#_b834afc0edbcf4bbfd54f0cca2b0635bp@chr19:49843537..49843640, +
7.87e-102FFCP PHASE2:Hg19::chr19:49843537..49843640,+#_b834afc0edbcf4bbfd54f0cca2b0635bp@chr19:49843537..49843640, +
2.77e-101FFCP PHASE2:Hg19::chr17:8868385..8868412,+#_ca75de798b6b6c071fc7d1879c57c81dp@chr17:8868385..8868412, +
2.77e-101FFCP PHASE1:Hg19::chr17:8868385..8868412,+#_ca75de798b6b6c071fc7d1879c57c81dp@chr17:8868385..8868412, +
3.83e-101FFCP PHASE1:Hg19::chr1:160681573..160681587,-#_20d4ec56c65f14ab43e5bdc1cf283193p2@CD48
3.83e-101FFCP PHASE2:Hg19::chr1:160681573..160681587,-#_20d4ec56c65f14ab43e5bdc1cf283193p2@CD48
5.05e-101FFCP PHASE1:Hg19::chr17:56415424..56415454,-#_f4d24155f701f8bbdbbc237a5d6dfa31p@chr17:56415424..56415454, -
5.05e-101FFCP PHASE2:Hg19::chr17:56415424..56415454,-#_f4d24155f701f8bbdbbc237a5d6dfa31p@chr17:56415424..56415454, -
6.02e-101FFCP PHASE1:Hg19::chr16:50776625..50776663,-#_183c5a7dfc1a1fa9eaee6c9c69ea57b1p@chr16:50776625..50776663, -
6.02e-101FFCP PHASE2:Hg19::chr16:50776625..50776663,-#_183c5a7dfc1a1fa9eaee6c9c69ea57b1p@chr16:50776625..50776663, -
1.12e-100FFCP PHASE2:Hg19::chr21:46340884..46340893,-#_728b4493d2dd900ae97f21f6cb1b1802p3@ITGB2
1.12e-100FFCP PHASE1:Hg19::chr21:46340884..46340893,-#_728b4493d2dd900ae97f21f6cb1b1802p3@ITGB2
3.56e-100FFCP PHASE1:Hg19::chr1:9711821..9711832,+#_06ad8404a477447d5bf9d689f2dfe24cp2@PIK3CD
3.56e-100FFCP PHASE2:Hg19::chr1:9711821..9711832,+#_06ad8404a477447d5bf9d689f2dfe24cp2@PIK3CD
1.24e-99FFCP PHASE1:Hg19::chr6:14122393..14122430,+#_5d7bd3d2a4d0f487a2f67312babdfb34p@chr6:14122393..14122430, +
1.24e-99FFCP PHASE2:Hg19::chr6:14122393..14122430,+#_5d7bd3d2a4d0f487a2f67312babdfb34p@chr6:14122393..14122430, +
1.58e-99FFCP PHASE2:Hg19::chr9:134543820..134543862,-#_fd7430ae8ab1bdf13d5cc00950a78772p@chr9:134543820..134543862, -
1.58e-99FFCP PHASE1:Hg19::chr9:134543820..134543862,-#_fd7430ae8ab1bdf13d5cc00950a78772p@chr9:134543820..134543862, -
2.64e-99FFCP PHASE2:Hg19::chr1:203258874..203258891,+#_edad4eb0143b47f1d7515bd619c82ac2p@chr1:203258874..203258891, +
2.64e-99FFCP PHASE1:Hg19::chr1:203258874..203258891,+#_edad4eb0143b47f1d7515bd619c82ac2p@chr1:203258874..203258891, +
3.03e-99FFCP PHASE1:Hg19::chr1:31229452..31229490,-#_840c6468ce88648ffa2fddb40a6be893p@chr1:31229452..31229490, -
3.03e-99FFCP PHASE2:Hg19::chr1:31229452..31229490,-#_840c6468ce88648ffa2fddb40a6be893p@chr1:31229452..31229490, -
1.25e-98FFCP PHASE2:Hg19::chr19:16695359..16695379,+#_05111e2bc511d531fea37d240d94d071p@chr19:16695359..16695379, +
1.25e-98FFCP PHASE1:Hg19::chr19:16695359..16695379,+#_05111e2bc511d531fea37d240d94d071p@chr19:16695359..16695379, +
1.82e-98FFCP PHASE1:Hg19::chr14:100531693..100531705,+#_128eb99f681c882591770809bae5e5afp6@EVL
1.82e-98FFCP PHASE2:Hg19::chr14:100531693..100531705,+#_128eb99f681c882591770809bae5e5afp6@EVL
1.84e-98FFCP PHASE2:Hg19::chr1:185125341..185125373,+#_f1a329ca7b26f9c7c9ab53c0004cbc6ep@chr1:185125341..185125373, +
1.84e-98FFCP PHASE1:Hg19::chr1:185125341..185125373,+#_f1a329ca7b26f9c7c9ab53c0004cbc6ep@chr1:185125341..185125373, +
3.19e-98FFCP PHASE1:Hg19::chr17:43303504..43303534,-#_a5d7c2668e024f0feeeed753d57bc249p@chr17:43303504..43303534, -
3.19e-98FFCP PHASE2:Hg19::chr17:43303504..43303534,-#_a5d7c2668e024f0feeeed753d57bc249p@chr17:43303504..43303534, -
7.75e-98FFCP PHASE2:Hg19::chr5:149790235..149790248,-#_47a33775ee52a6b161b205f04ad7771ap@chr5:149790235..149790248, -
7.75e-98FFCP PHASE1:Hg19::chr5:149790235..149790248,-#_47a33775ee52a6b161b205f04ad7771ap@chr5:149790235..149790248, -
1.36e-97FFCP PHASE2:Hg19::chr15:45018966..45018983,-#_d246291f37d50e4b4ca0e79ec21e0c7dp@chr15:45018966..45018983, -
1.36e-97FFCP PHASE1:Hg19::chr15:45018966..45018983,-#_d246291f37d50e4b4ca0e79ec21e0c7dp@chr15:45018966..45018983, -
1.41e-97FFCP PHASE1:Hg19::chr19:49838937..49838974,+#_4db6aa25d039569d225cf2c57b4c1567p@chr19:49838937..49838974, +
1.41e-97FFCP PHASE2:Hg19::chr19:49838937..49838974,+#_4db6aa25d039569d225cf2c57b4c1567p@chr19:49838937..49838974, +
2.18e-97FFCP PHASE2:Hg19::chr6:32577619..32577667,-#_df05e0aa461298729af8f51922061111p@chr6:32577619..32577667, -
2.18e-97FFCP PHASE1:Hg19::chr6:32577619..32577667,-#_df05e0aa461298729af8f51922061111p@chr6:32577619..32577667, -
5.38e-97FFCP PHASE1:Hg19::chr1:27986192..27986227,-#_d0791354edcbe43f5d137aec9e414e12p@chr1:27986192..27986227, -
5.38e-97FFCP PHASE2:Hg19::chr1:27986192..27986227,-#_d0791354edcbe43f5d137aec9e414e12p@chr1:27986192..27986227, -
6.07e-97FFCP PHASE2:Hg19::chr11:64107705..64107718,+#_2dc1592f89f61c472e1aaf3bc2b89bbdp2@CCDC88B
6.07e-97FFCP PHASE1:Hg19::chr11:64107705..64107718,+#_2dc1592f89f61c472e1aaf3bc2b89bbdp2@CCDC88B
6.11e-97FFCP PHASE1:Hg19::chr19:2085323..2085357,-#_6691733112e7f8fa9180d8ab86f225b5p2@MOB3A
6.11e-97FFCP PHASE2:Hg19::chr19:2085323..2085357,-#_6691733112e7f8fa9180d8ab86f225b5p2@MOB3A
1.36e-96FFCP PHASE1:Hg19::chr1:206753376..206753393,-#_f6859ca95bc68155c48ba22efd35d2c8p@chr1:206753376..206753393, -
1.36e-96FFCP PHASE2:Hg19::chr1:206753376..206753393,-#_f6859ca95bc68155c48ba22efd35d2c8p@chr1:206753376..206753393, -
1.47e-96FFCP PHASE1:Hg19::chr5:100239086..100239122,+#_b1ba7c30b7fab5cdce9c9642378749dbp1@AK055485
1.47e-96FFCP PHASE2:Hg19::chr5:100239086..100239122,+#_b1ba7c30b7fab5cdce9c9642378749dbp1@AK055485
2.08e-96FFCP PHASE1:Hg19::chr10:11207485..11207496,+#_0253886a90adf67cf4f4a284a159cb0dp9@CELF2
2.08e-96FFCP PHASE2:Hg19::chr10:11207485..11207496,+#_0253886a90adf67cf4f4a284a159cb0dp9@CELF2
3.45e-96FFCP PHASE2:Hg19::chr2:158300517..158300544,-#_8fa640e79ba297af9ab10b7b0779fbc7p2@CYTIP
3.45e-96FFCP PHASE1:Hg19::chr2:158300517..158300544,-#_8fa640e79ba297af9ab10b7b0779fbc7p2@CYTIP
4.94e-96FFCP PHASE1:Hg19::chr2:128458939..128458961,-#_637f514b52427eb79098462f56141f11p@chr2:128458939..128458961, -
4.94e-96FFCP PHASE2:Hg19::chr2:128458939..128458961,-#_637f514b52427eb79098462f56141f11p@chr2:128458939..128458961, -
6.04e-96FFCP PHASE2:Hg19::chr19:1067256..1067270,+#_187ed32ea3b943b40222785a5f5138cep4@HMHA1
6.04e-96FFCP PHASE1:Hg19::chr19:1067256..1067270,+#_187ed32ea3b943b40222785a5f5138cep4@HMHA1
7.23e-96FFCP PHASE1:Hg19::chr16:50715172..50715194,-#_21afaa9a7e0d5e5ca5e26f31d87b9ec9p2@SNX20
7.23e-96FFCP PHASE2:Hg19::chr16:50715172..50715194,-#_21afaa9a7e0d5e5ca5e26f31d87b9ec9p2@SNX20
7.83e-96FFCP PHASE1:Hg19::chr1:27952741..27952753,-#_697e215337bbad2a71d2680fc68a2e02p8@FGR
7.83e-96FFCP PHASE2:Hg19::chr1:27952741..27952753,-#_697e215337bbad2a71d2680fc68a2e02p8@FGR
1.47e-95FFCP PHASE2:Hg19::chr7:128503395..128503414,+#_fa3db0accae75a983c7cbbb3476db5d6p@chr7:128503395..128503414, +
1.47e-95FFCP PHASE1:Hg19::chr7:128503395..128503414,+#_fa3db0accae75a983c7cbbb3476db5d6p@chr7:128503395..128503414, +

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