Personal tools

CL:0000738

From FANTOM5_SSTAR

Revision as of 04:42, 8 February 2012 by Autoedit (talk | contribs) (Created page with "{{CL |id=CL:0000738 |name=leukocyte |namespace=cell |def="An achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissu...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Name:leukocyte
Namespace:cell
Definition:"An achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue." [GOC:add, GOC:tfm, ISBN:978-0-323-05290-0]
Xrefs:
links:

BTO:0000751

FMA:62852
Synonyms: "immune cell" EXACT []
"leucocyte" EXACT []
"white blood cell" EXACT []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000219(motile cell),CL:0000988(hematopoietic cell)
develops_from:CL:0000037(hematopoietic stem cell)



Children


is a:CL:0000451 (dendritic cell),CL:0000766 (myeloid leukocyte),CL:0002087 (nongranular leukocyte)
derives from:FF:0104973 (Hodgkin lymphoma cell line sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
  • 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
  • 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
  • 10416-106C2 (chronic lymphocytic leukemia (T-CLL) cell line:SKW-3)
  • 10421-106C7 (adult T-cell leukemia cell line:ATN-1)
  • 10422-106C8 (Burkitt's lymphoma cell line:DAUDI)
  • 10427-106D4 (b cell line:RPMI1788)
  • 10429-106D6 (acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL)
  • 10435-106E3 (Hodgkin's lymphoma cell line:HD-Mar2)
  • 10455-106G5 (acute lymphoblastic leukemia (B-ALL) cell line:BALL-1)

... further results Mouse (Mus musculus)

  • 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
  • 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
  • 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
  • 10416-106C2 (chronic lymphocytic leukemia (T-CLL) cell line:SKW-3)
  • 10421-106C7 (adult T-cell leukemia cell line:ATN-1)
  • 10422-106C8 (Burkitt's lymphoma cell line:DAUDI)
  • 10427-106D4 (b cell line:RPMI1788)
  • 10429-106D6 (acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL)
  • 10435-106E3 (Hodgkin's lymphoma cell line:HD-Mar2)
  • 10455-106G5 (acute lymphoblastic leukemia (B-ALL) cell line:BALL-1)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000738 (leukocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
6.79e-110FFCP PHASE1:Hg19::chr1:206730535..206730549,+#_220fc651e91be1e5fa73d8c3062f53dbp4@RASSF5
6.79e-110FFCP PHASE2:Hg19::chr1:206730535..206730549,+#_220fc651e91be1e5fa73d8c3062f53dbp4@RASSF5
2.26e-109FFCP PHASE2:Hg19::chr1:203256483..203256503,-#_668d6f1d3d810764d1b007918f7166c7p@chr1:203256483..203256503, -
2.26e-109FFCP PHASE1:Hg19::chr1:203256483..203256503,-#_668d6f1d3d810764d1b007918f7166c7p@chr1:203256483..203256503, -
5.29e-108FFCP PHASE1:Hg19::chr2:68592394..68592405,+#_2ae36b4f2aa1eee7c15716f8e42f9c1cp2@PLEK
5.29e-108FFCP PHASE2:Hg19::chr2:68592394..68592405,+#_2ae36b4f2aa1eee7c15716f8e42f9c1cp2@PLEK
1.08e-107FFCP PHASE2:Hg19::chr13:41593392..41593403,-#_002802208359386d00e55e0a52b4dca4p7@ELF1
1.08e-107FFCP PHASE1:Hg19::chr13:41593392..41593403,-#_002802208359386d00e55e0a52b4dca4p7@ELF1
3.21e-107FFCP PHASE1:Hg19::chr19:49842010..49842054,+#_cd00ca476dfc29a4961eaff07dfa7e03p@chr19:49842010..49842054, +
3.21e-107FFCP PHASE2:Hg19::chr19:49842010..49842054,+#_cd00ca476dfc29a4961eaff07dfa7e03p@chr19:49842010..49842054, +
5.93e-107FFCP PHASE2:Hg19::chr2:24149046..24149063,+#_e893a1058b6547f69107431c9138c851p@chr2:24149046..24149063, +
5.93e-107FFCP PHASE1:Hg19::chr2:24149046..24149063,+#_e893a1058b6547f69107431c9138c851p@chr2:24149046..24149063, +
1.93e-106FFCP PHASE1:Hg19::chr13:41593405..41593416,-#_5b1062665302e0f982f9f122bece61f4p9@ELF1
1.93e-106FFCP PHASE2:Hg19::chr13:41593405..41593416,-#_5b1062665302e0f982f9f122bece61f4p9@ELF1
5.83e-106FFCP PHASE2:Hg19::chr1:203256822..203256845,+#_eaac8e6cec79f73b305d83819551130cp1@ENST00000433008
5.83e-106FFCP PHASE1:Hg19::chr1:203256822..203256845,+#_eaac8e6cec79f73b305d83819551130cp1@ENST00000433008
7.74e-106FFCP PHASE1:Hg19::chr17:6917862..6917879,-#_bc1bc4f9b699fa90dcd7b8d8f493d425p1@AF161372
7.74e-106FFCP PHASE2:Hg19::chr17:6917862..6917879,-#_bc1bc4f9b699fa90dcd7b8d8f493d425p1@AF161372
2.31e-105FFCP PHASE2:Hg19::chr19:2085302..2085320,-#_b56c4162fc33068722b53d1fe4d7ce4ap3@MOB3A
2.31e-105FFCP PHASE1:Hg19::chr19:2085302..2085320,-#_b56c4162fc33068722b53d1fe4d7ce4ap3@MOB3A
8.43e-105FFCP PHASE2:Hg19::chr2:163175430..163175460,-#_986b4c1febf091809d583c1901e2fb52p2@IFIH1
8.43e-105FFCP PHASE1:Hg19::chr2:163175430..163175460,-#_986b4c1febf091809d583c1901e2fb52p2@IFIH1
9.45e-105FFCP PHASE1:Hg19::chr2:158300487..158300500,-#_8f86b396982a60957cf12a364b0836c0p3@CYTIP
9.45e-105FFCP PHASE2:Hg19::chr2:158300487..158300500,-#_8f86b396982a60957cf12a364b0836c0p3@CYTIP
2.82e-104FFCP PHASE2:Hg19::chr15:73075463..73075507,+#_e0d506016fd7b439a309d5def3fe758cp1@LOC100287559
2.82e-104FFCP PHASE1:Hg19::chr15:73075463..73075507,+#_e0d506016fd7b439a309d5def3fe758cp1@LOC100287559
5.87e-103FFCP PHASE1:Hg19::chr17:36857970..36858038,+#_9424a225d310f57b6a7b263076645fbdp@chr17:36857970..36858038, +
5.87e-103FFCP PHASE2:Hg19::chr17:36857970..36858038,+#_9424a225d310f57b6a7b263076645fbdp@chr17:36857970..36858038, +
8.39e-103FFCP PHASE1:Hg19::chr1:31206575..31206590,-#_d310711eb9918fc8b73e9198feb9ef31p@chr1:31206575..31206590, -
8.39e-103FFCP PHASE2:Hg19::chr1:31206575..31206590,-#_d310711eb9918fc8b73e9198feb9ef31p@chr1:31206575..31206590, -
1.11e-102FFCP PHASE2:Hg19::chr2:61110364..61110387,-#_7d679d946fd65df6ead20844d6a1025cp@chr2:61110364..61110387, -
1.11e-102FFCP PHASE1:Hg19::chr2:61110364..61110387,-#_7d679d946fd65df6ead20844d6a1025cp@chr2:61110364..61110387, -
1.78e-102FFCP PHASE1:Hg19::chr22:18260077..18260127,+#_a97aa015e1a31e57ff42c5d9c2fb567cp1@LINC00528
1.78e-102FFCP PHASE2:Hg19::chr22:18260077..18260127,+#_a97aa015e1a31e57ff42c5d9c2fb567cp1@LINC00528
3.75e-102FFCP PHASE2:Hg19::chr5:100236376..100236391,-#_05e2c4a25c1ab4ab911ea90e41483b6dp@chr5:100236376..100236391, -
3.75e-102FFCP PHASE1:Hg19::chr5:100236376..100236391,-#_05e2c4a25c1ab4ab911ea90e41483b6dp@chr5:100236376..100236391, -
5.82e-102FFCP PHASE2:Hg19::chr19:49842573..49842602,+#_fe072878b67a4c7b281ad1437359e8b4p@chr19:49842573..49842602, +
5.82e-102FFCP PHASE1:Hg19::chr19:49842573..49842602,+#_fe072878b67a4c7b281ad1437359e8b4p@chr19:49842573..49842602, +
7.87e-102FFCP PHASE1:Hg19::chr19:49843537..49843640,+#_b834afc0edbcf4bbfd54f0cca2b0635bp@chr19:49843537..49843640, +
7.87e-102FFCP PHASE2:Hg19::chr19:49843537..49843640,+#_b834afc0edbcf4bbfd54f0cca2b0635bp@chr19:49843537..49843640, +
2.77e-101FFCP PHASE1:Hg19::chr17:8868385..8868412,+#_ca75de798b6b6c071fc7d1879c57c81dp@chr17:8868385..8868412, +
2.77e-101FFCP PHASE2:Hg19::chr17:8868385..8868412,+#_ca75de798b6b6c071fc7d1879c57c81dp@chr17:8868385..8868412, +
3.83e-101FFCP PHASE1:Hg19::chr1:160681573..160681587,-#_20d4ec56c65f14ab43e5bdc1cf283193p2@CD48
3.83e-101FFCP PHASE2:Hg19::chr1:160681573..160681587,-#_20d4ec56c65f14ab43e5bdc1cf283193p2@CD48
5.05e-101FFCP PHASE1:Hg19::chr17:56415424..56415454,-#_f4d24155f701f8bbdbbc237a5d6dfa31p@chr17:56415424..56415454, -
5.05e-101FFCP PHASE2:Hg19::chr17:56415424..56415454,-#_f4d24155f701f8bbdbbc237a5d6dfa31p@chr17:56415424..56415454, -
6.02e-101FFCP PHASE2:Hg19::chr16:50776625..50776663,-#_183c5a7dfc1a1fa9eaee6c9c69ea57b1p@chr16:50776625..50776663, -
6.02e-101FFCP PHASE1:Hg19::chr16:50776625..50776663,-#_183c5a7dfc1a1fa9eaee6c9c69ea57b1p@chr16:50776625..50776663, -
1.12e-100FFCP PHASE1:Hg19::chr21:46340884..46340893,-#_728b4493d2dd900ae97f21f6cb1b1802p3@ITGB2
1.12e-100FFCP PHASE2:Hg19::chr21:46340884..46340893,-#_728b4493d2dd900ae97f21f6cb1b1802p3@ITGB2
3.56e-100FFCP PHASE2:Hg19::chr1:9711821..9711832,+#_06ad8404a477447d5bf9d689f2dfe24cp2@PIK3CD
3.56e-100FFCP PHASE1:Hg19::chr1:9711821..9711832,+#_06ad8404a477447d5bf9d689f2dfe24cp2@PIK3CD
1.24e-99FFCP PHASE1:Hg19::chr6:14122393..14122430,+#_5d7bd3d2a4d0f487a2f67312babdfb34p@chr6:14122393..14122430, +
1.24e-99FFCP PHASE2:Hg19::chr6:14122393..14122430,+#_5d7bd3d2a4d0f487a2f67312babdfb34p@chr6:14122393..14122430, +
1.58e-99FFCP PHASE2:Hg19::chr9:134543820..134543862,-#_fd7430ae8ab1bdf13d5cc00950a78772p@chr9:134543820..134543862, -
1.58e-99FFCP PHASE1:Hg19::chr9:134543820..134543862,-#_fd7430ae8ab1bdf13d5cc00950a78772p@chr9:134543820..134543862, -
2.64e-99FFCP PHASE2:Hg19::chr1:203258874..203258891,+#_edad4eb0143b47f1d7515bd619c82ac2p@chr1:203258874..203258891, +
2.64e-99FFCP PHASE1:Hg19::chr1:203258874..203258891,+#_edad4eb0143b47f1d7515bd619c82ac2p@chr1:203258874..203258891, +
3.03e-99FFCP PHASE1:Hg19::chr1:31229452..31229490,-#_840c6468ce88648ffa2fddb40a6be893p@chr1:31229452..31229490, -
3.03e-99FFCP PHASE2:Hg19::chr1:31229452..31229490,-#_840c6468ce88648ffa2fddb40a6be893p@chr1:31229452..31229490, -
1.25e-98FFCP PHASE2:Hg19::chr19:16695359..16695379,+#_05111e2bc511d531fea37d240d94d071p@chr19:16695359..16695379, +
1.25e-98FFCP PHASE1:Hg19::chr19:16695359..16695379,+#_05111e2bc511d531fea37d240d94d071p@chr19:16695359..16695379, +
1.82e-98FFCP PHASE1:Hg19::chr14:100531693..100531705,+#_128eb99f681c882591770809bae5e5afp6@EVL
1.82e-98FFCP PHASE2:Hg19::chr14:100531693..100531705,+#_128eb99f681c882591770809bae5e5afp6@EVL
1.84e-98FFCP PHASE2:Hg19::chr1:185125341..185125373,+#_f1a329ca7b26f9c7c9ab53c0004cbc6ep@chr1:185125341..185125373, +
1.84e-98FFCP PHASE1:Hg19::chr1:185125341..185125373,+#_f1a329ca7b26f9c7c9ab53c0004cbc6ep@chr1:185125341..185125373, +
3.19e-98FFCP PHASE2:Hg19::chr17:43303504..43303534,-#_a5d7c2668e024f0feeeed753d57bc249p@chr17:43303504..43303534, -
3.19e-98FFCP PHASE1:Hg19::chr17:43303504..43303534,-#_a5d7c2668e024f0feeeed753d57bc249p@chr17:43303504..43303534, -
7.75e-98FFCP PHASE1:Hg19::chr5:149790235..149790248,-#_47a33775ee52a6b161b205f04ad7771ap@chr5:149790235..149790248, -
7.75e-98FFCP PHASE2:Hg19::chr5:149790235..149790248,-#_47a33775ee52a6b161b205f04ad7771ap@chr5:149790235..149790248, -
1.36e-97FFCP PHASE1:Hg19::chr15:45018966..45018983,-#_d246291f37d50e4b4ca0e79ec21e0c7dp@chr15:45018966..45018983, -
1.36e-97FFCP PHASE2:Hg19::chr15:45018966..45018983,-#_d246291f37d50e4b4ca0e79ec21e0c7dp@chr15:45018966..45018983, -
1.41e-97FFCP PHASE1:Hg19::chr19:49838937..49838974,+#_4db6aa25d039569d225cf2c57b4c1567p@chr19:49838937..49838974, +
1.41e-97FFCP PHASE2:Hg19::chr19:49838937..49838974,+#_4db6aa25d039569d225cf2c57b4c1567p@chr19:49838937..49838974, +
2.18e-97FFCP PHASE1:Hg19::chr6:32577619..32577667,-#_df05e0aa461298729af8f51922061111p@chr6:32577619..32577667, -
2.18e-97FFCP PHASE2:Hg19::chr6:32577619..32577667,-#_df05e0aa461298729af8f51922061111p@chr6:32577619..32577667, -
5.38e-97FFCP PHASE2:Hg19::chr1:27986192..27986227,-#_d0791354edcbe43f5d137aec9e414e12p@chr1:27986192..27986227, -
5.38e-97FFCP PHASE1:Hg19::chr1:27986192..27986227,-#_d0791354edcbe43f5d137aec9e414e12p@chr1:27986192..27986227, -
6.07e-97FFCP PHASE1:Hg19::chr11:64107705..64107718,+#_2dc1592f89f61c472e1aaf3bc2b89bbdp2@CCDC88B
6.07e-97FFCP PHASE2:Hg19::chr11:64107705..64107718,+#_2dc1592f89f61c472e1aaf3bc2b89bbdp2@CCDC88B
6.11e-97FFCP PHASE2:Hg19::chr19:2085323..2085357,-#_6691733112e7f8fa9180d8ab86f225b5p2@MOB3A
6.11e-97FFCP PHASE1:Hg19::chr19:2085323..2085357,-#_6691733112e7f8fa9180d8ab86f225b5p2@MOB3A
1.36e-96FFCP PHASE1:Hg19::chr1:206753376..206753393,-#_f6859ca95bc68155c48ba22efd35d2c8p@chr1:206753376..206753393, -
1.36e-96FFCP PHASE2:Hg19::chr1:206753376..206753393,-#_f6859ca95bc68155c48ba22efd35d2c8p@chr1:206753376..206753393, -
1.47e-96FFCP PHASE2:Hg19::chr5:100239086..100239122,+#_b1ba7c30b7fab5cdce9c9642378749dbp1@AK055485
1.47e-96FFCP PHASE1:Hg19::chr5:100239086..100239122,+#_b1ba7c30b7fab5cdce9c9642378749dbp1@AK055485
2.08e-96FFCP PHASE1:Hg19::chr10:11207485..11207496,+#_0253886a90adf67cf4f4a284a159cb0dp9@CELF2
2.08e-96FFCP PHASE2:Hg19::chr10:11207485..11207496,+#_0253886a90adf67cf4f4a284a159cb0dp9@CELF2
3.45e-96FFCP PHASE1:Hg19::chr2:158300517..158300544,-#_8fa640e79ba297af9ab10b7b0779fbc7p2@CYTIP
3.45e-96FFCP PHASE2:Hg19::chr2:158300517..158300544,-#_8fa640e79ba297af9ab10b7b0779fbc7p2@CYTIP
4.94e-96FFCP PHASE2:Hg19::chr2:128458939..128458961,-#_637f514b52427eb79098462f56141f11p@chr2:128458939..128458961, -
4.94e-96FFCP PHASE1:Hg19::chr2:128458939..128458961,-#_637f514b52427eb79098462f56141f11p@chr2:128458939..128458961, -
6.04e-96FFCP PHASE2:Hg19::chr19:1067256..1067270,+#_187ed32ea3b943b40222785a5f5138cep4@HMHA1
6.04e-96FFCP PHASE1:Hg19::chr19:1067256..1067270,+#_187ed32ea3b943b40222785a5f5138cep4@HMHA1
7.23e-96FFCP PHASE1:Hg19::chr16:50715172..50715194,-#_21afaa9a7e0d5e5ca5e26f31d87b9ec9p2@SNX20
7.23e-96FFCP PHASE2:Hg19::chr16:50715172..50715194,-#_21afaa9a7e0d5e5ca5e26f31d87b9ec9p2@SNX20
7.83e-96FFCP PHASE1:Hg19::chr1:27952741..27952753,-#_697e215337bbad2a71d2680fc68a2e02p8@FGR
7.83e-96FFCP PHASE2:Hg19::chr1:27952741..27952753,-#_697e215337bbad2a71d2680fc68a2e02p8@FGR
1.47e-95FFCP PHASE2:Hg19::chr7:128503395..128503414,+#_fa3db0accae75a983c7cbbb3476db5d6p@chr7:128503395..128503414, +
1.47e-95FFCP PHASE1:Hg19::chr7:128503395..128503414,+#_fa3db0accae75a983c7cbbb3476db5d6p@chr7:128503395..128503414, +