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{{CL
 
{{CL
|id=CL:0000980
+
|alt_id=
|name=plasmablast
 
|namespace=cell;;efo
 
|def="An activated mature (naive or memory) B cell that is secreting immunoglobulin, typified by being CD27-positive, CD38-positive, CD138-negative." [GO_REF:0000031, GOC:msz, GOC:tfm, PMCID:PMC2673126]
 
|xref=FMA:84371
 
|is_a=CL:0000785;;CL:0000946
 
|synonym=
 
 
|comment=
 
|comment=
|alt_id=
 
|disjoint_from=
 
|union_of=
 
 
|created_by=
 
|created_by=
|obo_creation_date=
+
|def="An activated mature (naive or memory) B cell that is secreting immunoglobulin, typified by being CD27-positive, CD38-positive, CD138-negative." [GO_REF:0000031, GOC:msz, GOC:tfm, PMCID:PMC2673126]
|subset=
 
 
|derives_from=
 
|derives_from=
 
|develops_from=CL:0000785
 
|develops_from=CL:0000785
 +
|disjoint_from=
 
|has_quality=
 
|has_quality=
 +
|id=CL:0000980
 +
|is_a=CL:0000785 ;;CL:0000946
 +
|is_obsolete=
 
|located_in=
 
|located_in=
 +
|name=plasmablast
 +
|namespace=cell;;efo
 +
|obo_creation_date=
 
|part_of=
 
|part_of=
 +
|preceded_by=
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|is_obsolete=
+
|subset=
|preceded_by=
+
|synonym=
 +
|union_of=
 +
|xref=FMA:84371
 
}}
 
}}

Revision as of 01:23, 12 September 2014

Name:plasmablast
Namespace:cell;;efo
Definition:"An activated mature (naive or memory) B cell that is secreting immunoglobulin, typified by being CD27-positive, CD38-positive, CD138-negative." [GO_REF:0000031, GOC:msz, GOC:tfm, PMCID:PMC2673126]
Xrefs:
links:
FMA:84371


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000785(mature B cell),CL:0000946(antibody secreting cell)
develops_from:CL:0000785(mature B cell)



Children


develops from:CL:0000786 (plasma cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.




Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000980 (plasmablast), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr17:76471163..76471166,+#_4fd287f2f7a63824156048cdc879a5ccp@chr17:76471163..76471166, +
5.42e-195FFCP PHASE1:Hg19::chr6:164466345..164466352,+#_4fd287f2f7a63824156048cdc879a5ccp@chr6:164466345..164466352, +
5.42e-195FFCP PHASE2:Hg19::chr1:17349613..17349631,-#_4fd287f2f7a63824156048cdc879a5ccp8@SDHB
5.42e-195FFCP PHASE1:Hg19::chr2:77581116..77581120,-#_4fd287f2f7a63824156048cdc879a5ccp@chr2:77581116..77581120, -
5.42e-195FFCP PHASE1:Hg19::chr3:6686484..6686491,+#_4fd287f2f7a63824156048cdc879a5ccp@chr3:6686484..6686491, +
5.42e-195FFCP PHASE2:Hg19::chr2:77746703..77746711,-#_4fd287f2f7a63824156048cdc879a5ccp9@LRRTM4
5.42e-195FFCP PHASE1:Hg19::chr1:17349613..17349631,-#_4fd287f2f7a63824156048cdc879a5ccp8@SDHB
5.42e-195FFCP PHASE1:Hg19::chr21:20747453..20747465,-#_4fd287f2f7a63824156048cdc879a5ccp@chr21:20747453..20747465, -
5.42e-195FFCP PHASE2:Hg19::chr6:166581583..166581586,+#_4fd287f2f7a63824156048cdc879a5ccp@chr6:166581583..166581586, +
5.42e-195FFCP PHASE1:Hg19::chr3:79363599..79363606,+#_4fd287f2f7a63824156048cdc879a5ccp@chr3:79363599..79363606, +
5.42e-195FFCP PHASE2:Hg19::chr6:164466441..164466449,+#_4fd287f2f7a63824156048cdc879a5ccp@chr6:164466441..164466449, +
5.42e-195FFCP PHASE1:Hg19::chr3:168236611..168236612,-#_4fd287f2f7a63824156048cdc879a5ccp@chr3:168236611..168236612, -
5.42e-195FFCP PHASE2:Hg19::chr21:20752389..20752420,-#_4fd287f2f7a63824156048cdc879a5ccp@chr21:20752389..20752420, -
5.42e-195FFCP PHASE1:Hg19::chr10:56410468..56410499,-#_4fd287f2f7a63824156048cdc879a5ccp@chr10:56410468..56410499, -
5.42e-195FFCP PHASE1:Hg19::chr17:76471146..76471155,+#_4fd287f2f7a63824156048cdc879a5ccp@chr17:76471146..76471155, +
5.42e-195FFCP PHASE1:Hg19::chr4:3881462..3881469,-#_4fd287f2f7a63824156048cdc879a5ccp@chr4:3881462..3881469, -
5.42e-195FFCP PHASE1:Hg19::chr6:164466441..164466449,+#_4fd287f2f7a63824156048cdc879a5ccp@chr6:164466441..164466449, +
5.42e-195FFCP PHASE1:Hg19::chr6:166581583..166581586,+#_4fd287f2f7a63824156048cdc879a5ccp@chr6:166581583..166581586, +
5.42e-195FFCP PHASE2:Hg19::chr21:20867728..20867731,-#_4fd287f2f7a63824156048cdc879a5ccp@chr21:20867728..20867731, -
5.42e-195FFCP PHASE2:Hg19::chr3:79363599..79363606,+#_4fd287f2f7a63824156048cdc879a5ccp@chr3:79363599..79363606, +
5.42e-195FFCP PHASE2:Hg19::chr1:17349654..17349690,-#_4fd287f2f7a63824156048cdc879a5ccp6@SDHB
5.42e-195FFCP PHASE2:Hg19::chr12:40991131..40991149,+#_4fd287f2f7a63824156048cdc879a5cc+, p@chr12:40991131..40991149
5.42e-195FFCP PHASE1:Hg19::chr17:76475275..76475285,-#_4fd287f2f7a63824156048cdc879a5ccp@chr17:76475275..76475285, -
5.42e-195FFCP PHASE2:Hg19::chr2:77746775..77746779,-#_4fd287f2f7a63824156048cdc879a5ccp14@LRRTM4
5.42e-195FFCP PHASE1:Hg19::chr1:17349654..17349690,-#_4fd287f2f7a63824156048cdc879a5ccp6@SDHB
5.42e-195FFCP PHASE1:Hg19::chr21:20752389..20752420,-#_4fd287f2f7a63824156048cdc879a5ccp@chr21:20752389..20752420, -
5.42e-195FFCP PHASE2:Hg19::chr6:166581590..166581596,+#_4fd287f2f7a63824156048cdc879a5ccp@chr6:166581590..166581596, +
5.42e-195FFCP PHASE2:Hg19::chr4:3881462..3881469,-#_4fd287f2f7a63824156048cdc879a5ccp@chr4:3881462..3881469, -
5.42e-195FFCP PHASE1:Hg19::chr3:168337915..168337930,-#_4fd287f2f7a63824156048cdc879a5ccp@chr3:168337915..168337930, -
5.42e-195FFCP PHASE2:Hg19::chr21:20752617..20752622,-#_4fd287f2f7a63824156048cdc879a5ccp@chr21:20752617..20752622, -
5.42e-195FFCP PHASE1:Hg19::chr21:20867728..20867731,-#_4fd287f2f7a63824156048cdc879a5ccp@chr21:20867728..20867731, -
5.42e-195FFCP PHASE1:Hg19::chr17:76471163..76471166,+#_4fd287f2f7a63824156048cdc879a5ccp@chr17:76471163..76471166, +
5.42e-195FFCP PHASE2:Hg19::chr2:77581116..77581120,-#_4fd287f2f7a63824156048cdc879a5ccp@chr2:77581116..77581120, -
5.42e-195FFCP PHASE1:Hg19::chr14:106829914..106829921,-#_4fd287f2f7a63824156048cdc879a5ccp1@HM996258, p1@HM996415, p1@HM996438
5.42e-195FFCP PHASE1:Hg19::chr6:166581590..166581596,+#_4fd287f2f7a63824156048cdc879a5ccp@chr6:166581590..166581596, +
5.42e-195FFCP PHASE2:Hg19::chr10:56410468..56410499,-#_4fd287f2f7a63824156048cdc879a5ccp@chr10:56410468..56410499, -
5.42e-195FFCP PHASE2:Hg19::chr7:86415255..86415288,+#_4fd287f2f7a63824156048cdc879a5ccp@chr7:86415255..86415288, +
5.42e-195FFCP PHASE2:Hg19::chr3:168236611..168236612,-#_4fd287f2f7a63824156048cdc879a5ccp@chr3:168236611..168236612, -
5.42e-195FFCP PHASE1:Hg19::chr3:158747347..158747353,+#_4fd287f2f7a63824156048cdc879a5ccp@chr3:158747347..158747353, +
5.42e-195FFCP PHASE1:Hg19::chr21:20752617..20752622,-#_4fd287f2f7a63824156048cdc879a5ccp@chr21:20752617..20752622, -
5.42e-195FFCP PHASE2:Hg19::chr1:101853882..101853891,-#_4fd287f2f7a63824156048cdc879a5ccp@chr1:101853882..101853891, -
5.42e-195FFCP PHASE2:Hg19::chr12:40953942..40953946,+#_4fd287f2f7a63824156048cdc879a5ccp@chr12:40953942..40953946, +
5.42e-195FFCP PHASE2:Hg19::chr5:88646759..88646764,+#_4fd287f2f7a63824156048cdc879a5ccp@chr5:88646759..88646764, +
5.42e-195FFCP PHASE1:Hg19::chr12:40991131..40991149,+#_4fd287f2f7a63824156048cdc879a5ccp@chr12:40991131..40991149, +
5.42e-195FFCP PHASE2:Hg19::chr8:128270027..128270033,-#_4fd287f2f7a63824156048cdc879a5ccp@chr8:128270027..128270033, -
5.42e-195FFCP PHASE2:Hg19::chr3:178947187..178947192,+#_4fd287f2f7a63824156048cdc879a5ccp@chr3:178947187..178947192, +
5.42e-195FFCP PHASE1:Hg19::chr5:88646759..88646764,+#_4fd287f2f7a63824156048cdc879a5ccp@chr5:88646759..88646764, +
5.42e-195FFCP PHASE1:Hg19::chr2:77746703..77746711,-#_4fd287f2f7a63824156048cdc879a5ccp9@LRRTM4
5.42e-195FFCP PHASE2:Hg19::chr3:168337915..168337930,-#_4fd287f2f7a63824156048cdc879a5ccp@chr3:168337915..168337930, -
5.42e-195FFCP PHASE2:Hg19::chr6:164466325..164466331,+#_4fd287f2f7a63824156048cdc879a5ccp@chr6:164466325..164466331, +
5.42e-195FFCP PHASE2:Hg19::chr3:6686484..6686491,+#_4fd287f2f7a63824156048cdc879a5ccp@chr3:6686484..6686491, +
5.42e-195FFCP PHASE1:Hg19::chr1:101853882..101853891,-#_4fd287f2f7a63824156048cdc879a5ccp@chr1:101853882..101853891, -
5.42e-195FFCP PHASE2:Hg19::chr3:158747347..158747353,+#_4fd287f2f7a63824156048cdc879a5ccp@chr3:158747347..158747353, +
5.42e-195FFCP PHASE2:Hg19::chr17:76471146..76471155,+#_4fd287f2f7a63824156048cdc879a5ccp@chr17:76471146..76471155, +
5.42e-195FFCP PHASE1:Hg19::chr3:178947187..178947192,+#_4fd287f2f7a63824156048cdc879a5ccp@chr3:178947187..178947192, +
5.42e-195FFCP PHASE1:Hg19::chr6:164466325..164466331,+#_4fd287f2f7a63824156048cdc879a5ccp@chr6:164466325..164466331, +
5.42e-195FFCP PHASE1:Hg19::chr8:128270027..128270033,-#_4fd287f2f7a63824156048cdc879a5ccp@chr8:128270027..128270033, -
5.42e-195FFCP PHASE2:Hg19::chr6:166581265..166581274,-#_4fd287f2f7a63824156048cdc879a5ccp5@T
5.42e-195FFCP PHASE2:Hg19::chr14:106829914..106829921,-#_4fd287f2f7a63824156048cdc879a5ccp1@HM996258, p1@HM996415, p1@HM996438
5.42e-195FFCP PHASE2:Hg19::chr17:76475275..76475285,-#_4fd287f2f7a63824156048cdc879a5ccp@chr17:76475275..76475285, -
5.42e-195FFCP PHASE1:Hg19::chr6:166581265..166581274,-#_4fd287f2f7a63824156048cdc879a5ccp5@T
5.42e-195FFCP PHASE1:Hg19::chr7:86415255..86415288,+#_4fd287f2f7a63824156048cdc879a5ccp@chr7:86415255..86415288, +
5.42e-195FFCP PHASE2:Hg19::chr5:114291872..114291873,+#_4fd287f2f7a63824156048cdc879a5ccp@chr5:114291872..114291873, +
5.42e-195FFCP PHASE1:Hg19::chr2:77746775..77746779,-#_4fd287f2f7a63824156048cdc879a5ccp14@LRRTM4
5.42e-195FFCP PHASE2:Hg19::chr6:164466345..164466352,+#_4fd287f2f7a63824156048cdc879a5ccp@chr6:164466345..164466352, +
5.42e-195FFCP PHASE2:Hg19::chr21:20747453..20747465,-#_4fd287f2f7a63824156048cdc879a5ccp@chr21:20747453..20747465, -
5.42e-195FFCP PHASE1:Hg19::chr5:114291872..114291873,+#_4fd287f2f7a63824156048cdc879a5ccp@chr5:114291872..114291873, +
5.42e-195FFCP PHASE1:Hg19::chr12:40953942..40953946,+#_4fd287f2f7a63824156048cdc879a5ccp@chr12:40953942..40953946, +
9.37e-99FFCP PHASE2:Hg19::chr14:106586621..106586626,-#_c0bb52de6d722fac6f4a1c0bc1a415ffp3@IGHV3-13
9.37e-99FFCP PHASE2:Hg19::chr3:178261188..178261195,-#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr3:178261188..178261195, -
9.37e-99FFCP PHASE1:Hg19::chr18:28728570..28728577,-#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr18:28728570..28728577, -
9.37e-99FFCP PHASE2:Hg19::chr12:126922654..126922657,+#_c0bb52de6d722fac6f4a1c0bc1a415ff+, p@chr12:126922654..126922657
9.37e-99FFCP PHASE1:Hg19::chr19:36698672..36698675,-#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr19:36698672..36698675, -
9.37e-99FFCP PHASE1:Hg19::chr3:178261188..178261195,-#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr3:178261188..178261195, -
9.37e-99FFCP PHASE2:Hg19::chr1:90962594..90962596,-#_c0bb52de6d722fac6f4a1c0bc1a415ff-, p@chr1:90962594..90962596
9.37e-99FFCP PHASE1:Hg19::chr3:189839512..189839520,-#_c0bb52de6d722fac6f4a1c0bc1a415ffp21@LEPREL1
9.37e-99FFCP PHASE1:Hg19::chr7:119999940..119999943,+#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr7:119999940..119999943, +
9.37e-99FFCP PHASE1:Hg19::chr14:102992396..102992401,+#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr14:102992396..102992401, +
9.37e-99FFCP PHASE2:Hg19::chr3:189839512..189839520,-#_c0bb52de6d722fac6f4a1c0bc1a415ffp21@LEPREL1
9.37e-99FFCP PHASE2:Hg19::chr7:119999940..119999943,+#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr7:119999940..119999943, +
9.37e-99FFCP PHASE2:Hg19::chr14:54342069..54342074,-#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr14:54342069..54342074, -
9.37e-99FFCP PHASE2:Hg19::chr18:28728570..28728577,-#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr18:28728570..28728577, -
9.37e-99FFCP PHASE2:Hg19::chr12:776344..776351,-#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr12:776344..776351, -
9.37e-99FFCP PHASE1:Hg19::chr12:776344..776351,-#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr12:776344..776351, -
9.37e-99FFCP PHASE2:Hg19::chr14:102992396..102992401,+#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr14:102992396..102992401, +
9.37e-99FFCP PHASE2:Hg19::chr14:106589870..106589873,-#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr14:106589870..106589873, -
9.37e-99FFCP PHASE1:Hg19::chr2:157336503..157336506,-#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr2:157336503..157336506, -
9.37e-99FFCP PHASE2:Hg19::chr6:166581392..166581398,+#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr6:166581392..166581398, +
9.37e-99FFCP PHASE1:Hg19::chr2:101054417..101054453,+#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr2:101054417..101054453, +
9.37e-99FFCP PHASE2:Hg19::chrX:18701132..18701138,-#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chrX:18701132..18701138, -
9.37e-99FFCP PHASE1:Hg19::chr14:106586621..106586626,-#_c0bb52de6d722fac6f4a1c0bc1a415ffp3@IGHV3-13
9.37e-99FFCP PHASE1:Hg19::chr12:39008217..39008221,+#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr12:39008217..39008221, +
9.37e-99FFCP PHASE1:Hg19::chr6:166581392..166581398,+#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr6:166581392..166581398, +
9.37e-99FFCP PHASE2:Hg19::chr19:36698672..36698675,-#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr19:36698672..36698675, -
9.37e-99FFCP PHASE2:Hg19::chr6:166581221..166581226,-#_c0bb52de6d722fac6f4a1c0bc1a415ffp8@T
9.37e-99FFCP PHASE2:Hg19::chr21:20752643..20752654,-#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr21:20752643..20752654, -
9.37e-99FFCP PHASE1:Hg19::chrX:18701132..18701138,-#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chrX:18701132..18701138, -
9.37e-99FFCP PHASE2:Hg19::chr2:101054417..101054453,+#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr2:101054417..101054453, +
9.37e-99FFCP PHASE1:Hg19::chr6:166581221..166581226,-#_c0bb52de6d722fac6f4a1c0bc1a415ffp8@T
9.37e-99FFCP PHASE2:Hg19::chr5:114289920..114289928,+#_c0bb52de6d722fac6f4a1c0bc1a415ffp@chr5:114289920..114289928, +