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Latest revision as of 04:03, 27 June 2012

Name:epithelial cell of large intestine
Namespace:cell
Definition:"An epithelial cell of the large intestine." [GOC:tfm]
Xrefs:
links:

BTO:0004297

FMA:256157
Synonyms: "epithelial cell of colon" RELATED []
Alt_id: CL:1000292
Created by:tmeehan
Creation date:2010-09-08T09:28:22Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0002563(intestinal epithelial cell)
part_of:UBERON:0000059(large intestine)



Children


is a:FF:0100797 (colonic cancer cell line)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002253 (epithelial cell of large intestine), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr2:148148505..148148515,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr2:148148505..148148515, -
1.55e-98FFCP PHASE2:Hg19::chr18:28720966..28720970,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr18:28720966..28720970, +
1.55e-98FFCP PHASE2:Hg19::chr12:77730114..77730120,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr12:77730114..77730120, -
1.55e-98FFCP PHASE2:Hg19::chr13:110258158..110258170,-#_ee6c42c2c71ddc1822d09b6018a62be6-, p@chr13:110258158..110258170
1.55e-98FFCP PHASE2:Hg19::chr7:30499737..30499761,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr7:30499737..30499761, +
1.55e-98FFCP PHASE2:Hg19::chrX:42162203..42162241,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chrX:42162203..42162241, +
1.55e-98FFCP PHASE2:Hg19::chr7:89797154..89797172,+#_ee6c42c2c71ddc1822d09b6018a62be6p9@STEAP2
1.55e-98FFCP PHASE2:Hg19::chr8:127817393..127817400,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr8:127817393..127817400, +
1.55e-98FFCP PHASE1:Hg19::chr3:66354424..66354472,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr3:66354424..66354472, +
1.55e-98FFCP PHASE1:Hg19::chr3:139373728..139373733,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr3:139373728..139373733, +
1.55e-98FFCP PHASE1:Hg19::chr7:138064518..138064531,-#_ee6c42c2c71ddc1822d09b6018a62be6-, p@chr7:138064518..138064531
1.55e-98FFCP PHASE1:Hg19::chr7:89797154..89797172,+#_ee6c42c2c71ddc1822d09b6018a62be6p9@STEAP2
1.55e-98FFCP PHASE1:Hg19::chr13:32790605..32790619,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr13:32790605..32790619, +
1.55e-98FFCP PHASE2:Hg19::chr14:26793415..26793426,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr14:26793415..26793426, -
1.55e-98FFCP PHASE1:Hg19::chr6:104674708..104674749,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr6:104674708..104674749, -
1.55e-98FFCP PHASE2:Hg19::chr15:45950558..45950561,+#_ee6c42c2c71ddc1822d09b6018a62be6+, p@chr15:45950558..45950561
1.55e-98FFCP PHASE1:Hg19::chr2:127711416..127711419,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr2:127711416..127711419, +
1.55e-98FFCP PHASE2:Hg19::chr9:98505341..98505348,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr9:98505341..98505348, +
1.55e-98FFCP PHASE1:Hg19::chr18:28720966..28720970,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr18:28720966..28720970, +
1.55e-98FFCP PHASE1:Hg19::chr5:71987749..71987774,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr5:71987749..71987774, -
1.55e-98FFCP PHASE1:Hg19::chr4:157174023..157174034,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr4:157174023..157174034, +
1.55e-98FFCP PHASE1:Hg19::chr10:2328652..2328660,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr10:2328652..2328660, +
1.55e-98FFCP PHASE2:Hg19::chr13:46093198..46093203,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr13:46093198..46093203, +
1.55e-98FFCP PHASE2:Hg19::chr6:5491056..5491061,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr6:5491056..5491061, +
1.55e-98FFCP PHASE1:Hg19::chr6:5491056..5491061,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr6:5491056..5491061, +
1.55e-98FFCP PHASE1:Hg19::chr1:93128331..93128338,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr1:93128331..93128338, -
1.55e-98FFCP PHASE2:Hg19::chr5:57619538..57619575,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr5:57619538..57619575, -
1.55e-98FFCP PHASE1:Hg19::chr13:54830821..54830841,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr13:54830821..54830841, +
1.55e-98FFCP PHASE2:Hg19::chr1:93128331..93128338,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr1:93128331..93128338, -
1.55e-98FFCP PHASE2:Hg19::chr7:87049573..87049608,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr7:87049573..87049608, -
1.55e-98FFCP PHASE1:Hg19::chr3:148164872..148164919,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr3:148164872..148164919, -
1.55e-98FFCP PHASE2:Hg19::chr8:127568784..127568794,+#_ee6c42c2c71ddc1822d09b6018a62be6p6@ENST00000524320
1.55e-98FFCP PHASE2:Hg19::chr3:140054665..140054678,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr3:140054665..140054678, -
1.55e-98FFCP PHASE2:Hg19::chr4:157174108..157174136,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr4:157174108..157174136, +
1.55e-98FFCP PHASE1:Hg19::chr8:127440115..127440120,+#_ee6c42c2c71ddc1822d09b6018a62be6+, p@chr8:127440115..127440120
1.55e-98FFCP PHASE1:Hg19::chr8:128415915..128415922,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr8:128415915..128415922, +
1.55e-98FFCP PHASE1:Hg19::chr7:87049573..87049608,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr7:87049573..87049608, -
1.55e-98FFCP PHASE2:Hg19::chr8:127438794..127438800,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr8:127438794..127438800, +
1.55e-98FFCP PHASE1:Hg19::chr1:219739282..219739288,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr1:219739282..219739288, -
1.55e-98FFCP PHASE1:Hg19::chr6:91774965..91774974,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr6:91774965..91774974, +
1.55e-98FFCP PHASE1:Hg19::chr18:39550015..39550034,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr18:39550015..39550034, +
1.55e-98FFCP PHASE1:Hg19::chrX:138909080..138909093,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chrX:138909080..138909093, -
1.55e-98FFCP PHASE2:Hg19::chr8:128691603..128691614,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr8:128691603..128691614, -
1.55e-98FFCP PHASE1:Hg19::chr13:99661014..99661016,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr13:99661014..99661016, -
1.55e-98FFCP PHASE2:Hg19::chr12:65277574..65277589,+#_ee6c42c2c71ddc1822d09b6018a62be6p2@FLJ41278
1.55e-98FFCP PHASE1:Hg19::chr9:125898916..125898941,-#_ee6c42c2c71ddc1822d09b6018a62be6p14@STRBP
1.55e-98FFCP PHASE2:Hg19::chr1:198324742..198324745,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr1:198324742..198324745, +
1.55e-98FFCP PHASE1:Hg19::chr2:205036975..205037009,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr2:205036975..205037009, -
1.55e-98FFCP PHASE2:Hg19::chr8:128415915..128415922,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr8:128415915..128415922, +
1.55e-98FFCP PHASE2:Hg19::chr4:169559850..169559856,-#_ee6c42c2c71ddc1822d09b6018a62be6-, p@chr4:169559850..169559856
1.55e-98FFCP PHASE1:Hg19::chr12:65466889..65466894,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr12:65466889..65466894, -
1.55e-98FFCP PHASE2:Hg19::chr13:54830821..54830841,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr13:54830821..54830841, +
1.55e-98FFCP PHASE2:Hg19::chr6:8389087..8389116,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr6:8389087..8389116, -
1.55e-98FFCP PHASE1:Hg19::chr7:141499716..141499722,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr7:141499716..141499722, +
1.55e-98FFCP PHASE1:Hg19::chr8:128418828..128418839,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr8:128418828..128418839, -
1.55e-98FFCP PHASE2:Hg19::chr14:22850283..22850310,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr14:22850283..22850310, -
1.55e-98FFCP PHASE1:Hg19::chr13:32790683..32790693,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr13:32790683..32790693, +
1.55e-98FFCP PHASE1:Hg19::chr18:53252911..53252918,-#_ee6c42c2c71ddc1822d09b6018a62be6p106@TCF4
1.55e-98FFCP PHASE1:Hg19::chr2:127711472..127711475,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr2:127711472..127711475, +
1.55e-98FFCP PHASE1:Hg19::chr2:163302780..163302789,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr2:163302780..163302789, -
1.55e-98FFCP PHASE1:Hg19::chr8:128118744..128118753,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr8:128118744..128118753, -
1.55e-98FFCP PHASE2:Hg19::chr1:55404829..55404833,-#_ee6c42c2c71ddc1822d09b6018a62be6-, p@chr1:55404829..55404833
1.55e-98FFCP PHASE2:Hg19::chr8:128418828..128418839,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr8:128418828..128418839, -
1.55e-98FFCP PHASE2:Hg19::chr13:28541425..28541439,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr13:28541425..28541439, -
1.55e-98FFCP PHASE1:Hg19::chr4:157174062..157174071,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr4:157174062..157174071, +
1.55e-98FFCP PHASE1:Hg19::chr8:99425711..99425716,-#_ee6c42c2c71ddc1822d09b6018a62be6p1@ENST00000518956
1.55e-98FFCP PHASE2:Hg19::chr6:5491081..5491106,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr6:5491081..5491106, +
1.55e-98FFCP PHASE1:Hg19::chr8:127681013..127681042,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr8:127681013..127681042, -
1.55e-98FFCP PHASE1:Hg19::chr3:171088092..171088113,-#_ee6c42c2c71ddc1822d09b6018a62be6-, p@chr3:171088092..171088113
1.55e-98FFCP PHASE1:Hg19::chr13:110258158..110258170,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr13:110258158..110258170, -
1.55e-98FFCP PHASE2:Hg19::chr2:19707156..19707203,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr2:19707156..19707203, +
1.55e-98FFCP PHASE1:Hg19::chr6:5491081..5491106,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr6:5491081..5491106, +
1.55e-98FFCP PHASE1:Hg19::chr8:128807259..128807281,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr8:128807259..128807281, +
1.55e-98FFCP PHASE1:Hg19::chr7:97958802..97958804,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr7:97958802..97958804, -
1.55e-98FFCP PHASE2:Hg19::chr8:128118744..128118753,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr8:128118744..128118753, -
1.55e-98FFCP PHASE1:Hg19::chr1:93128346..93128356,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr1:93128346..93128356, -
1.55e-98FFCP PHASE2:Hg19::chr3:148164659..148164667,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr3:148164659..148164667, -
1.55e-98FFCP PHASE2:Hg19::chr1:93128346..93128356,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr1:93128346..93128356, -
1.55e-98FFCP PHASE2:Hg19::chr7:87232406..87232409,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr7:87232406..87232409, -
1.55e-98FFCP PHASE1:Hg19::chr3:148165064..148165071,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr3:148165064..148165071, -
1.55e-98FFCP PHASE2:Hg19::chr6:8446968..8446983,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr6:8446968..8446983, +
1.55e-98FFCP PHASE2:Hg19::chr8:55331615..55331618,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr8:55331615..55331618, +
1.55e-98FFCP PHASE2:Hg19::chr3:140054724..140054735,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr3:140054724..140054735, -
1.55e-98FFCP PHASE2:Hg19::chr13:32790605..32790619,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr13:32790605..32790619, +
1.55e-98FFCP PHASE2:Hg19::chr4:157174324..157174332,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr4:157174324..157174332, +
1.55e-98FFCP PHASE1:Hg19::chr21:37143915..37143924,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr21:37143915..37143924, -
1.55e-98FFCP PHASE1:Hg19::chr8:127445866..127445873,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr8:127445866..127445873, +
1.55e-98FFCP PHASE1:Hg19::chr8:128415944..128415958,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr8:128415944..128415958, +
1.55e-98FFCP PHASE1:Hg19::chr7:87232406..87232409,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr7:87232406..87232409, -
1.55e-98FFCP PHASE2:Hg19::chr8:127440115..127440120,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr8:127440115..127440120, +
1.55e-98FFCP PHASE1:Hg19::chr9:104610923..104610939,-#_ee6c42c2c71ddc1822d09b6018a62be6p@chr9:104610923..104610939, -
1.55e-98FFCP PHASE1:Hg19::chr14:76289395..76289406,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr14:76289395..76289406, +
1.55e-98FFCP PHASE1:Hg19::chr4:71222797..71222807,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr4:71222797..71222807, +
1.55e-98FFCP PHASE2:Hg19::chr8:99425711..99425716,-#_ee6c42c2c71ddc1822d09b6018a62be6p1@ENST00000518956
1.55e-98FFCP PHASE2:Hg19::chr8:128415944..128415958,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr8:128415944..128415958, +
1.55e-98FFCP PHASE2:Hg19::chr10:24726466..24726472,+#_ee6c42c2c71ddc1822d09b6018a62be6+, p@chr10:24726466..24726472
1.55e-98FFCP PHASE1:Hg19::chr2:66794389..66794398,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr2:66794389..66794398, +
1.55e-98FFCP PHASE2:Hg19::chr8:39792182..39792188,+#_ee6c42c2c71ddc1822d09b6018a62be6p14@IDO2
1.55e-98FFCP PHASE1:Hg19::chr1:78621016..78621042,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr1:78621016..78621042, +
1.55e-98FFCP PHASE1:Hg19::chr13:46093198..46093203,+#_ee6c42c2c71ddc1822d09b6018a62be6p@chr13:46093198..46093203, +