Difference between revisions of "CL:0002253"
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0002253
|name=epithelial cell of large intestine
|namespace=cell
|def="An epithelial cell of the large intestine." [GOC:tfm]
|xref=BTO:0004297;;FMA:256157
|i...") |
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|part_of=UBERON:0000059 | |part_of=UBERON:0000059 | ||
| + | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
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Latest revision as of 04:03, 27 June 2012
| Name: | epithelial cell of large intestine | ||
|---|---|---|---|
| Namespace: | cell | ||
| Definition: | "An epithelial cell of the large intestine." [GOC:tfm] | ||
| Xrefs: |
| ||
| Synonyms: | "epithelial cell of colon" RELATED [] | ||
| Alt_id: | CL:1000292 | ||
| Created by: | tmeehan | ||
| Creation date: | 2010-09-08T09:28:22Z |
Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.
link to ontology dataset
data
Parents
| is_a: | CL:0002563(intestinal epithelial cell) |
|---|---|
| part_of: | UBERON:0000059(large intestine) |
Children
| is a: | FF:0100797 (colonic cancer cell line) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10420-106C6 (colon carcinoma cell line:COLO-320)
- 10511-107D7
- 10513-107D9 (colon carcinoma cell line:CACO-2)
- 10523-107F1
- 10557-107I8
- 10635-108I5
- 10653-109B5
Mouse (Mus musculus)
- 10420-106C6 (colon carcinoma cell line:COLO-320)
- 10511-107D7
- 10513-107D9 (colon carcinoma cell line:CACO-2)
- 10523-107F1
- 10557-107I8
- 10635-108I5
- 10653-109B5
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002253 (epithelial cell of large intestine), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:5491056..5491061,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr6:5491056..5491061, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:57619538..57619575,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr5:57619538..57619575, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:93128331..93128338,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr1:93128331..93128338, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:55404829..55404833,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr1:55404829..55404833, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:148164872..148164919,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr3:148164872..148164919, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:127568784..127568794,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p6@ENST00000524320 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:140054665..140054678,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr3:140054665..140054678, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:157174108..157174136,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr4:157174108..157174136, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:127440115..127440120,+#_ee6c42c2c71ddc1822d09b6018a62be6 | +, p@chr8:127440115..127440120 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:87049573..87049608,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr7:87049573..87049608, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:128415915..128415922,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:128415915..128415922, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:87049573..87049608,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr7:87049573..87049608, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:127438794..127438800,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:127438794..127438800, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:65466889..65466894,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr12:65466889..65466894, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:91774965..91774974,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr6:91774965..91774974, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chrX:138909080..138909093,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chrX:138909080..138909093, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:128691603..128691614,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:128691603..128691614, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:19522690..19522704,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr1:19522690..19522704, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:65277574..65277589,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p2@FLJ41278 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr13:32790605..32790619,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr13:32790605..32790619, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr9:125898916..125898941,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p14@STRBP |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:198324742..198324745,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr1:198324742..198324745, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:205036975..205037009,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr2:205036975..205037009, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:128415915..128415922,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:128415915..128415922, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:163338283..163338286,+#_ee6c42c2c71ddc1822d09b6018a62be6 | +, p@chr1:163338283..163338286 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:169559850..169559856,-#_ee6c42c2c71ddc1822d09b6018a62be6 | -, p@chr4:169559850..169559856 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr13:54830821..54830841,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr13:54830821..54830841, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:141499716..141499722,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr7:141499716..141499722, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:128418828..128418839,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:128418828..128418839, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr14:22850283..22850310,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr14:22850283..22850310, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:127711472..127711475,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr2:127711472..127711475, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr13:54830821..54830841,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr13:54830821..54830841, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:8389087..8389116,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr6:8389087..8389116, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:163302780..163302789,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr2:163302780..163302789, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:128118744..128118753,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:128118744..128118753, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr13:99661014..99661016,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr13:99661014..99661016, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:55404829..55404833,-#_ee6c42c2c71ddc1822d09b6018a62be6 | -, p@chr1:55404829..55404833 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:128418828..128418839,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:128418828..128418839, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr13:28541425..28541439,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr13:28541425..28541439, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:157174062..157174071,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr4:157174062..157174071, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:99425711..99425716,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p1@ENST00000518956 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:5491081..5491106,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr6:5491081..5491106, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:171088092..171088113,-#_ee6c42c2c71ddc1822d09b6018a62be6 | -, p@chr3:171088092..171088113 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:19707156..19707203,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr2:19707156..19707203, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:5491081..5491106,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr6:5491081..5491106, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:128807259..128807281,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:128807259..128807281, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:97958802..97958804,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr7:97958802..97958804, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:128118744..128118753,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:128118744..128118753, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:148164659..148164667,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr3:148164659..148164667, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:93128346..93128356,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr1:93128346..93128356, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:127681013..127681042,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:127681013..127681042, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:148165064..148165071,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr3:148165064..148165071, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:8446968..8446983,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr6:8446968..8446983, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:55331615..55331618,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:55331615..55331618, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:140054724..140054735,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr3:140054724..140054735, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr13:32790605..32790619,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr13:32790605..32790619, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:157174324..157174332,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr4:157174324..157174332, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:127445866..127445873,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:127445866..127445873, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:87232406..87232409,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr7:87232406..87232409, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:128415944..128415958,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:128415944..128415958, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:87232406..87232409,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr7:87232406..87232409, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:127440115..127440120,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:127440115..127440120, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr9:104610923..104610939,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr9:104610923..104610939, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr13:32790683..32790693,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr13:32790683..32790693, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr18:28720966..28720970,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr18:28720966..28720970, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:93128331..93128338,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr1:93128331..93128338, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:71222797..71222807,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr4:71222797..71222807, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:99425711..99425716,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p1@ENST00000518956 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:128415944..128415958,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:128415944..128415958, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr10:24726466..24726472,+#_ee6c42c2c71ddc1822d09b6018a62be6 | +, p@chr10:24726466..24726472 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:66794389..66794398,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr2:66794389..66794398, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:39792182..39792188,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p14@IDO2 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:30499737..30499761,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr7:30499737..30499761, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr21:37143915..37143924,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr21:37143915..37143924, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr13:110258158..110258170,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr13:110258158..110258170, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:66354424..66354472,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr3:66354424..66354472, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:8389389..8389429,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr6:8389389..8389429, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr18:39550015..39550034,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr18:39550015..39550034, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chrX:42162203..42162241,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chrX:42162203..42162241, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:128419359..128419367,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:128419359..128419367, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:24797750..24797759,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr3:24797750..24797759, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr16:55344418..55344442,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr16:55344418..55344442, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:157174023..157174034,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr4:157174023..157174034, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:219739282..219739288,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr1:219739282..219739288, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:169559850..169559856,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr4:169559850..169559856, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:140054665..140054678,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr3:140054665..140054678, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:163302793..163302800,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr2:163302793..163302800, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:128259602..128259609,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:128259602..128259609, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:107667666..107667673,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:107667666..107667673, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:65277574..65277589,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p2@FLJ41278 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr9:104610923..104610939,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr9:104610923..104610939, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:128419359..128419367,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:128419359..128419367, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr13:28541442..28541451,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr13:28541442..28541451, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:157174075..157174084,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr4:157174075..157174084, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:19522690..19522704,-#_ee6c42c2c71ddc1822d09b6018a62be6 | -, p@chr1:19522690..19522704 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:57619538..57619575,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr5:57619538..57619575, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:24797750..24797759,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr3:24797750..24797759, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:128259602..128259609,-#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:128259602..128259609, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr14:76289395..76289406,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr14:76289395..76289406, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:107667666..107667673,+#_ee6c42c2c71ddc1822d09b6018a62be6 | p@chr8:107667666..107667673, + |
