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Revision as of 17:27, 26 June 2012

Name:ear hair cell
Namespace:cell
Definition:"A hair cell of the ear that contains the organs of balance and hearing." [GOC:dph, GOC:tfm, ISBN:0192801023]
Synonyms: "ear receptor cell" EXACT []
Created by:tmeehan
Creation date:2010-09-24T01:49:31Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000855(sensory hair cell)



Children


is a:CL:0000202 (auditory hair cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

Mouse (Mus musculus)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002374 (ear hair cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE2:Mm9::chr2:180335744..180335746,+#_6393a251f7ef04078762632518f885bdp@chr2:180335744..180335746, +
3.07e-86FFCP PHASE1:Mm9::chr19:10535924..10535927,-#_6393a251f7ef04078762632518f885bdp@chr19:10535924..10535927, -
3.07e-86FFCP PHASE2:Mm9::chr10:18246142..18246145,+#_6393a251f7ef04078762632518f885bdp@chr10:18246142..18246145, +
3.07e-86FFCP PHASE1:Mm9::chr17:34185343..34185356,+#_6393a251f7ef04078762632518f885bdp7@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr17:34185378..34185383,+#_6393a251f7ef04078762632518f885bdp11@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr5:72652671..72652676,+#_6393a251f7ef04078762632518f885bdp@chr5:72652671..72652676, +
3.07e-86FFCP PHASE1:Mm9::chr4:106770202..106770208,+#_6393a251f7ef04078762632518f885bdp@chr4:106770202..106770208, +
3.07e-86FFCP PHASE1:Mm9::chr15:97828021..97828028,-#_6393a251f7ef04078762632518f885bdp@chr15:97828021..97828028, -
3.07e-86FFCP PHASE2:Mm9::chr2:142906965..142906982,-#_6393a251f7ef04078762632518f885bdp@chr2:142906965..142906982, -
3.07e-86FFCP PHASE1:Mm9::chr6:83129695..83129696,+#_6393a251f7ef04078762632518f885bdp24@Dctn1
3.07e-86FFCP PHASE1:Mm9::chr2:12032746..12032751,-#_6393a251f7ef04078762632518f885bdp@chr2:12032746..12032751, -
3.07e-86FFCP PHASE1:Mm9::chr9:92087990..92087995,+#_6393a251f7ef04078762632518f885bdp3@Plscr5
3.07e-86FFCP PHASE2:Mm9::chr6:36966723..36966734,-#_6393a251f7ef04078762632518f885bdp@chr6:36966723..36966734, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185362..34185370,+#_6393a251f7ef04078762632518f885bdp10@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr9:92087990..92087995,+#_6393a251f7ef04078762632518f885bdp3@Plscr5
3.07e-86FFCP PHASE2:Mm9::chr17:34185389..34185401,+#_6393a251f7ef04078762632518f885bdp8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr17:15466888..15466898,-#_6393a251f7ef04078762632518f885bdp@chr17:15466888..15466898, -
3.07e-86FFCP PHASE1:Mm9::chr8:94283075..94283082,+#_6393a251f7ef04078762632518f885bdp@chr8:94283075..94283082, +
3.07e-86FFCP PHASE2:Mm9::chr11:94371110..94371111,-#_6393a251f7ef04078762632518f885bdp@chr11:94371110..94371111, -
3.07e-86FFCP PHASE2:Mm9::chr3:127520184..127520191,-#_6393a251f7ef04078762632518f885bdp@chr3:127520184..127520191, -
3.07e-86FFCP PHASE2:Mm9::chr6:83129695..83129696,+#_6393a251f7ef04078762632518f885bdp24@Dctn1
3.07e-86FFCP PHASE2:Mm9::chr17:15466888..15466898,-#_6393a251f7ef04078762632518f885bdp@chr17:15466888..15466898, -
3.07e-86FFCP PHASE2:Mm9::chr2:142907424..142907448,-#_6393a251f7ef04078762632518f885bdp@chr2:142907424..142907448, -
3.07e-86FFCP PHASE1:Mm9::chr11:94371110..94371111,-#_6393a251f7ef04078762632518f885bdp@chr11:94371110..94371111, -
3.07e-86FFCP PHASE1:Mm9::chr6:64684505..64684512,+#_6393a251f7ef04078762632518f885bdp@chr6:64684505..64684512, +
3.07e-86FFCP PHASE2:Mm9::chr11:114652018..114652020,+#_6393a251f7ef04078762632518f885bdp@chr11:114652018..114652020, +
3.07e-86FFCP PHASE1:Mm9::chr2:180335744..180335746,+#_6393a251f7ef04078762632518f885bdp@chr2:180335744..180335746, +
3.07e-86FFCP PHASE1:Mm9::chr5:72652671..72652676,+#_6393a251f7ef04078762632518f885bdp@chr5:72652671..72652676, +
3.07e-86FFCP PHASE2:Mm9::chr6:36966993..36966996,-#_6393a251f7ef04078762632518f885bdp@chr6:36966993..36966996, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185378..34185383,+#_6393a251f7ef04078762632518f885bdp11@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr3:127520184..127520191,-#_6393a251f7ef04078762632518f885bdp@chr3:127520184..127520191, -
3.07e-86FFCP PHASE1:Mm9::chr6:36966723..36966734,-#_6393a251f7ef04078762632518f885bdp@chr6:36966723..36966734, -
3.07e-86FFCP PHASE2:Mm9::chr9:87599703..87599714,-#_6393a251f7ef04078762632518f885bdp@chr9:87599703..87599714, -
3.07e-86FFCP PHASE2:Mm9::chr6:64684505..64684512,+#_6393a251f7ef04078762632518f885bdp@chr6:64684505..64684512, +
3.07e-86FFCP PHASE2:Mm9::chr8:94283075..94283082,+#_6393a251f7ef04078762632518f885bdp@chr8:94283075..94283082, +
3.07e-86FFCP PHASE1:Mm9::chr9:87599703..87599714,-#_6393a251f7ef04078762632518f885bdp@chr9:87599703..87599714, -
3.07e-86FFCP PHASE2:Mm9::chr17:34185343..34185356,+#_6393a251f7ef04078762632518f885bdp7@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr15:91379135..91379143,-#_6393a251f7ef04078762632518f885bdp@chr15:91379135..91379143, -
3.07e-86FFCP PHASE2:Mm9::chr19:10535924..10535927,-#_6393a251f7ef04078762632518f885bdp@chr19:10535924..10535927, -
3.07e-86FFCP PHASE1:Mm9::chr2:142906965..142906982,-#_6393a251f7ef04078762632518f885bdp@chr2:142906965..142906982, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185389..34185401,+#_6393a251f7ef04078762632518f885bdp8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr18:66033513..66033517,-#_6393a251f7ef04078762632518f885bdp@chr18:66033513..66033517, -
3.07e-86FFCP PHASE1:Mm9::chr2:53464193..53464197,+#_6393a251f7ef04078762632518f885bdp@chr2:53464193..53464197, +
3.07e-86FFCP PHASE2:Mm9::chr2:53464193..53464197,+#_6393a251f7ef04078762632518f885bdp@chr2:53464193..53464197, +
3.07e-86FFCP PHASE1:Mm9::chr6:36966993..36966996,-#_6393a251f7ef04078762632518f885bdp@chr6:36966993..36966996, -
3.07e-86FFCP PHASE2:Mm9::chr18:66033513..66033517,-#_6393a251f7ef04078762632518f885bdp@chr18:66033513..66033517, -
3.07e-86FFCP PHASE2:Mm9::chr4:106770202..106770208,+#_6393a251f7ef04078762632518f885bdp@chr4:106770202..106770208, +
3.07e-86FFCP PHASE2:Mm9::chr6:64684637..64684654,+#_6393a251f7ef04078762632518f885bdp@chr6:64684637..64684654, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684637..64684654,+#_6393a251f7ef04078762632518f885bdp@chr6:64684637..64684654, +
3.07e-86FFCP PHASE2:Mm9::chr2:12032746..12032751,-#_6393a251f7ef04078762632518f885bdp@chr2:12032746..12032751, -
3.07e-86FFCP PHASE2:Mm9::chr17:34185362..34185370,+#_6393a251f7ef04078762632518f885bdp10@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr15:91379135..91379143,-#_6393a251f7ef04078762632518f885bdp@chr15:91379135..91379143, -
3.07e-86FFCP PHASE1:Mm9::chr13:31171742..31171745,-#_6393a251f7ef04078762632518f885bdp@chr13:31171742..31171745, -
3.07e-86FFCP PHASE1:Mm9::chr2:142907424..142907448,-#_6393a251f7ef04078762632518f885bdp@chr2:142907424..142907448, -
3.07e-86FFCP PHASE1:Mm9::chr10:18246142..18246145,+#_6393a251f7ef04078762632518f885bdp@chr10:18246142..18246145, +
3.07e-86FFCP PHASE1:Mm9::chr16:55283394..55283400,-#_6393a251f7ef04078762632518f885bdp1@Zpld1
3.07e-86FFCP PHASE1:Mm9::chr11:114652018..114652020,+#_6393a251f7ef04078762632518f885bdp@chr11:114652018..114652020, +
3.07e-86FFCP PHASE2:Mm9::chr16:55283394..55283400,-#_6393a251f7ef04078762632518f885bdp1@Zpld1
3.07e-86FFCP PHASE2:Mm9::chr13:31171742..31171745,-#_6393a251f7ef04078762632518f885bdp@chr13:31171742..31171745, -
3.07e-86FFCP PHASE2:Mm9::chr15:97828021..97828028,-#_6393a251f7ef04078762632518f885bdp@chr15:97828021..97828028, -
3.07e-86FFCP PHASE2:Mm9::chr6:64684692..64684697,+#_6393a251f7ef04078762632518f885bdp@chr6:64684692..64684697, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684692..64684697,+#_6393a251f7ef04078762632518f885bdp@chr6:64684692..64684697, +
2.74e-44FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_ca819317444dcb86559790a95de50e7bp@chr8:13414289..13414295, +
2.74e-44FFCP PHASE1:Mm9::chr5:68423014..68423037,+#_ca819317444dcb86559790a95de50e7bp1@Grxcr1
2.74e-44FFCP PHASE2:Mm9::chr14:31283072..31283081,-#_ca819317444dcb86559790a95de50e7bp@chr14:31283072..31283081, -
2.74e-44FFCP PHASE1:Mm9::chr2:128881546..128881553,-#_ca819317444dcb86559790a95de50e7bp@chr2:128881546..128881553, -
2.74e-44FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_ca819317444dcb86559790a95de50e7bp@chr1:93235228..93235249, +
2.74e-44FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_ca819317444dcb86559790a95de50e7bp@chr17:13983179..13983190, +
2.74e-44FFCP PHASE2:Mm9::chr6:29428397..29428407,-#_ca819317444dcb86559790a95de50e7bp@chr6:29428397..29428407, -
2.74e-44FFCP PHASE1:Mm9::chr2:67011941..67011951,+#_ca819317444dcb86559790a95de50e7bp3@Gm1322
2.74e-44FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_ca819317444dcb86559790a95de50e7bp@chr3:154459231..154459240, +
2.74e-44FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_ca819317444dcb86559790a95de50e7bp@chr12:109905468..109905474, +
2.74e-44FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_ca819317444dcb86559790a95de50e7bp1@Strc
2.74e-44FFCP PHASE1:Mm9::chr4:133802857..133802884,+#_ca819317444dcb86559790a95de50e7bp@chr4:133802857..133802884, +
2.74e-44FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_ca819317444dcb86559790a95de50e7bp@chr11:11599532..11599539, -
2.74e-44FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_ca819317444dcb86559790a95de50e7bp5@BC030867
2.74e-44FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_ca819317444dcb86559790a95de50e7bp@chr1:93235228..93235249, +
2.74e-44FFCP PHASE2:Mm9::chr13:31877112..31877122,+#_ca819317444dcb86559790a95de50e7bp@chr13:31877112..31877122, +
2.74e-44FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_ca819317444dcb86559790a95de50e7bp@chr17:13983198..13983203, +
2.74e-44FFCP PHASE1:Mm9::chr3:106986057..106986062,+#_ca819317444dcb86559790a95de50e7bp1@Kcna10
2.74e-44FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_ca819317444dcb86559790a95de50e7bp5@Fer1l6
2.74e-44FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_ca819317444dcb86559790a95de50e7bp@chr10:67371994..67372010, +
2.74e-44FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_ca819317444dcb86559790a95de50e7bp2@Otof
2.74e-44FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_ca819317444dcb86559790a95de50e7bp@chr2:73232344..73232356, -
2.74e-44FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_ca819317444dcb86559790a95de50e7bp@chr8:13414266..13414279, +
2.74e-44FFCP PHASE1:Mm9::chr19:4140290..4140321,+#_ca819317444dcb86559790a95de50e7bp2@Gpr152
2.74e-44FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_ca819317444dcb86559790a95de50e7bp@chr19:10536797..10536802, -
2.74e-44FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_ca819317444dcb86559790a95de50e7bp@chr6:113251606..113251613, +
2.74e-44FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_ca819317444dcb86559790a95de50e7bp@chr13:43699228..43699239, +
2.74e-44FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_ca819317444dcb86559790a95de50e7bp@chr1:182528371..182528385, +
2.74e-44FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_ca819317444dcb86559790a95de50e7bp41@Cacnb2
2.74e-44FFCP PHASE2:Mm9::chr1:60561636..60561645,-#_ca819317444dcb86559790a95de50e7bp@chr1:60561636..60561645, -
2.74e-44FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_ca819317444dcb86559790a95de50e7bp@chr1:172843885..172843890, -
2.74e-44FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_ca819317444dcb86559790a95de50e7bp@chr14:20649897..20649907, +
2.74e-44FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_ca819317444dcb86559790a95de50e7bp@chr16:93971325..93971337, -
2.74e-44FFCP PHASE1:Mm9::chr2:75320183..75320189,+#_ca819317444dcb86559790a95de50e7bp@chr2:75320183..75320189, +
2.74e-44FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_ca819317444dcb86559790a95de50e7bp9@Ankrd24
2.74e-44FFCP PHASE1:Mm9::chr12:13572961..13572974,+#_ca819317444dcb86559790a95de50e7bp@chr12:13572961..13572974, +
2.74e-44FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_ca819317444dcb86559790a95de50e7bp1@Strc
2.74e-44FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_ca819317444dcb86559790a95de50e7bp@chrX:154140781..154140788, +

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