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{{CL
 
{{CL
|id=CL:0002583
+
|alt_id=
|name=subcutaneous preadipocyte
 
|namespace=cell
 
|def="A preadipocyte that is part of subcutaneous tissue." [GOC:tfm]
 
|xref=
 
|is_a=CL:0002334
 
|synonym=
 
 
|comment=
 
|comment=
|alt_id=
 
|disjoint_from=
 
|union_of=
 
 
|created_by=tmeehan
 
|created_by=tmeehan
|obo_creation_date=2011-03-03T04:33:01Z
+
|def="A preadipocyte that is part of subcutaneous tissue." [GOC:tfm]
|subset=
 
 
|derives_from=
 
|derives_from=
 
|develops_from=
 
|develops_from=
 +
|disjoint_from=
 
|has_quality=
 
|has_quality=
 +
|id=CL:0002583
 +
|is_a=CL:0002334
 +
|is_obsolete=
 
|located_in=
 
|located_in=
|part_of=
+
|name=subcutaneous preadipocyte
 +
|namespace=FANTOM
 +
|obo_creation_date=2011-03-03T04:33:01Z
 +
|part_of=UBERON:0002072
 +
|preceded_by=
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
+
|subset=
|preceded_by=
+
|synonym=
 +
|union_of=
 +
|xref=
 
}}
 
}}

Latest revision as of 07:45, 12 September 2014

Name:subcutaneous preadipocyte
Namespace:FANTOM
Definition:"A preadipocyte that is part of subcutaneous tissue." [GOC:tfm]
Created by:tmeehan
Creation date:2011-03-03T04:33:01Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0002334(preadipocyte)
part_of:UBERON:0002072(hypodermis)



Children


derives from:FF:0000142 (human subcutaneous preadipocyte sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002583 (subcutaneous preadipocyte), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
3.96e-66FFCP PHASE2:Hg19::chr20:61368258..61368275,+#_6514a6a9ea6425bc49ad01a5b25142d1p@chr20:61368258..61368275, +
3.96e-66FFCP PHASE1:Hg19::chr20:61368258..61368275,+#_6514a6a9ea6425bc49ad01a5b25142d1p@chr20:61368258..61368275, +
2.74e-50FFCP PHASE1:Hg19::chr11:102712977..102712984,-#_eb56a22254689cd7f09987864323b546p@chr11:102712977..102712984, -
2.74e-50FFCP PHASE2:Hg19::chr11:102712977..102712984,-#_eb56a22254689cd7f09987864323b546p@chr11:102712977..102712984, -
4.52e-50FFCP PHASE2:Hg19::chr5:150159331..150159340,-#_f5518bec16de523c0d1fce22c74abf66p@chr5:150159331..150159340, -
4.52e-50FFCP PHASE1:Hg19::chr5:150159331..150159340,-#_f5518bec16de523c0d1fce22c74abf66p@chr5:150159331..150159340, -
1.1e-40FFCP PHASE1:Hg19::chr9:1051481..1051496,+#_bf52265b3647800214c6bc8a38032cefp3@DMRT2
1.1e-40FFCP PHASE2:Hg19::chr9:1051481..1051496,+#_bf52265b3647800214c6bc8a38032cefp3@DMRT2
1.89e-37FFCP PHASE1:Hg19::chr3:13610185..13610194,+#_0c49e2d3fe83cf78a29a09788a7a5ac8p9@FBLN2
1.89e-37FFCP PHASE2:Hg19::chr3:13610185..13610194,+#_0c49e2d3fe83cf78a29a09788a7a5ac8p9@FBLN2
5.69e-37FFCP PHASE1:Hg19::chr1:9262795..9262800,-#_ceb233a2315298cd25ba06acf3825f86p3@ENST00000437157
5.69e-37FFCP PHASE2:Hg19::chr1:9262795..9262800,-#_ceb233a2315298cd25ba06acf3825f86p3@ENST00000437157
7.05e-34FFCP PHASE1:Hg19::chr11:131614903..131614910,-#_c077213852b82f6124f218381c031646p@chr11:131614903..131614910, -
7.05e-34FFCP PHASE2:Hg19::chr11:131614903..131614910,-#_c077213852b82f6124f218381c031646p@chr11:131614903..131614910, -
9.92e-34FFCP PHASE2:Hg19::chr11:69867119..69867131,-#_43f077a4ad6193e95f6dfdbdc64cc1b6p1@ENST00000528507
9.92e-34FFCP PHASE1:Hg19::chr11:69867119..69867131,-#_43f077a4ad6193e95f6dfdbdc64cc1b6p1@ENST00000528507
3.35e-32FFCP PHASE2:Hg19::chr15:74704015..74704027,-#_a3bed2a56d3d948068cb513f2c0b1732p@chr15:74704015..74704027, -
3.35e-32FFCP PHASE1:Hg19::chr15:74704015..74704027,-#_a3bed2a56d3d948068cb513f2c0b1732p@chr15:74704015..74704027, -
4.71e-31FFCP PHASE2:Hg19::chrX:2670326..2670334,+#_a718ab148dcee64ddf40a7ba4f2935afp1@XGPY2, p8@XG
4.71e-31FFCP PHASE1:Hg19::chrX:2670326..2670334,+#_a718ab148dcee64ddf40a7ba4f2935afp1@XGPY2, p8@XG
6.02e-30FFCP PHASE1:Hg19::chr17:8747590..8747595,-#_a5c97326a7fd3701d735d892bcc52ddcp@chr17:8747590..8747595, -
6.02e-30FFCP PHASE2:Hg19::chr17:8747590..8747595,-#_a5c97326a7fd3701d735d892bcc52ddcp@chr17:8747590..8747595, -
7.1e-28FFCP PHASE1:Hg19::chr1:9262713..9262723,-#_4f1d6827cc0e9386408b2ee23b3e4ec7p2@ENST00000437157
7.1e-28FFCP PHASE2:Hg19::chr1:9262713..9262723,-#_4f1d6827cc0e9386408b2ee23b3e4ec7p2@ENST00000437157
1.07e-27FFCP PHASE1:Hg19::chr8:139753474..139753492,-#_a7b154198644e498d9cba5397f538b26p@chr8:139753474..139753492, -
1.07e-27FFCP PHASE2:Hg19::chr8:139753474..139753492,-#_a7b154198644e498d9cba5397f538b26p@chr8:139753474..139753492, -
5.56e-26FFCP PHASE1:Hg19::chr7:137160998..137161001,-#_25c165e497cea2637bcaf4e716e2b582p@chr7:137160998..137161001, -
5.56e-26FFCP PHASE2:Hg19::chr7:137160998..137161001,-#_25c165e497cea2637bcaf4e716e2b582p@chr7:137160998..137161001, -
1.85e-25FFCP PHASE1:Hg19::chr21:47405885..47405896,+#_70ffcaf3236c44bd8dab6029e6dfa1a2p@chr21:47405885..47405896, +
1.85e-25FFCP PHASE2:Hg19::chr21:47405885..47405896,+#_70ffcaf3236c44bd8dab6029e6dfa1a2p@chr21:47405885..47405896, +
3.89e-25FFCP PHASE2:Hg19::chr6:35216360..35216374,+#_0b8e5bc71a30bf0843484affb4b3ffe0p10@SCUBE3
3.89e-25FFCP PHASE1:Hg19::chr6:35216360..35216374,+#_0b8e5bc71a30bf0843484affb4b3ffe0p10@SCUBE3
1.29e-24FFCP PHASE2:Hg19::chrX:133733457..133733463,+#_d2443e72541325be745d848d8f8ae152p1@ENST00000440614
1.29e-24FFCP PHASE1:Hg19::chrX:133733457..133733463,+#_d2443e72541325be745d848d8f8ae152p1@ENST00000440614
2.23e-23FFCP PHASE2:Hg19::chrX:133681692..133681696,-#_2fb7a1122e2ac2a132c971d46e258651p@chrX:133681692..133681696, -
2.23e-23FFCP PHASE1:Hg19::chrX:133681692..133681696,-#_2fb7a1122e2ac2a132c971d46e258651p@chrX:133681692..133681696, -
4.86e-22FFCP PHASE1:Hg19::chr11:102712933..102712947,-#_21bf9e53f5859b6c254c8d5306291bf3p@chr11:102712933..102712947, -
4.86e-22FFCP PHASE2:Hg19::chr11:102712933..102712947,-#_21bf9e53f5859b6c254c8d5306291bf3p@chr11:102712933..102712947, -
4.66e-21FFCP PHASE1:Hg19::chr1:7361033..7361052,-#_480376b8fc9ca6cfbdcc12dc7995b995p@chr1:7361033..7361052, -
4.66e-21FFCP PHASE2:Hg19::chr1:7361033..7361052,-#_480376b8fc9ca6cfbdcc12dc7995b995p@chr1:7361033..7361052, -
6.96e-21FFCP PHASE2:Hg19::chr1:215157270..215157279,+#_71ac0c820f498816b8df521d7a23b80ap@chr1:215157270..215157279, +
6.96e-21FFCP PHASE1:Hg19::chr1:215157270..215157279,+#_71ac0c820f498816b8df521d7a23b80ap@chr1:215157270..215157279, +
4.9e-20FFCP PHASE1:Hg19::chr8:27529996..27530008,+#_7918ad55463c1f04c742aa10fe35c7bcp@chr8:27529996..27530008, +
4.9e-20FFCP PHASE2:Hg19::chr8:27529996..27530008,+#_7918ad55463c1f04c742aa10fe35c7bcp@chr8:27529996..27530008, +
6.54e-20FFCP PHASE2:Hg19::chr21:47405899..47405911,+#_1bdeccda91ca36b5ead5ba66c339e8a9p@chr21:47405899..47405911, +
6.54e-20FFCP PHASE1:Hg19::chr21:47405899..47405911,+#_1bdeccda91ca36b5ead5ba66c339e8a9p@chr21:47405899..47405911, +
1.03e-19FFCP PHASE1:Hg19::chr6:35217101..35217114,+#_fcfe08b9ae951a3dc4ff3579dc4b05c9p@chr6:35217101..35217114, +
1.03e-19FFCP PHASE2:Hg19::chr6:35217101..35217114,+#_fcfe08b9ae951a3dc4ff3579dc4b05c9p@chr6:35217101..35217114, +
9.18e-19FFCP PHASE1:Hg19::chr1:243419021..243419028,-#_51217e2eccec2db7274c537ae6c5a9e7p20@CEP170
9.18e-19FFCP PHASE2:Hg19::chr1:243419021..243419028,-#_51217e2eccec2db7274c537ae6c5a9e7p20@CEP170
2.9e-18FFCP PHASE2:Hg19::chr19:51227333..51227347,+#_7e7e5cbb6842cf01a8f2cb7aadc51a89p@chr19:51227333..51227347, +
2.9e-18FFCP PHASE1:Hg19::chr19:51227333..51227347,+#_7e7e5cbb6842cf01a8f2cb7aadc51a89p@chr19:51227333..51227347, +
5.48e-18FFCP PHASE2:Hg19::chr1:45088343..45088354,+#_71abc397be67a865431658f848a28440p@chr1:45088343..45088354, +
5.48e-18FFCP PHASE1:Hg19::chr1:45088343..45088354,+#_71abc397be67a865431658f848a28440p@chr1:45088343..45088354, +
1.04e-17FFCP PHASE1:Hg19::chr1:215157211..215157225,+#_85f9900faa85b4bbf58f45b1559437bd+, p@chr1:215157211..215157225
1.04e-17FFCP PHASE2:Hg19::chr1:215157211..215157225,+#_85f9900faa85b4bbf58f45b1559437bdp@chr1:215157211..215157225, +
1.27e-17FFCP PHASE2:Hg19::chr13:28896641..28896653,-#_fe6e12d8bba35da457a81746398a889ap5@FLT1
1.27e-17FFCP PHASE1:Hg19::chr13:28896641..28896653,-#_fe6e12d8bba35da457a81746398a889ap5@FLT1
1.37e-17FFCP PHASE1:Hg19::chr6:35211380..35211391,+#_863bfd506b86f994fcf7f6dff8f586ebp@chr6:35211380..35211391, +
1.37e-17FFCP PHASE2:Hg19::chr6:35211380..35211391,+#_863bfd506b86f994fcf7f6dff8f586ebp@chr6:35211380..35211391, +
2.87e-17FFCP PHASE2:Hg19::chr5:14440817..14440832,+#_96a220bc1c3b58cd6c90b1427748670bp24@TRIO
2.87e-17FFCP PHASE1:Hg19::chr5:14440817..14440832,+#_96a220bc1c3b58cd6c90b1427748670bp24@TRIO
4.54e-17FFCP PHASE1:Hg19::chr15:74708308..74708313,-#_4e93130577f9596a1b76e85b0e5f5662p@chr15:74708308..74708313, -
4.54e-17FFCP PHASE2:Hg19::chr15:74708308..74708313,-#_4e93130577f9596a1b76e85b0e5f5662p@chr15:74708308..74708313, -
7.9e-17FFCP PHASE1:Hg19::chr17:1972190..1972210,-#_79961b46028be97a5443b13b0603dd8fp@chr17:1972190..1972210, -
7.9e-17FFCP PHASE2:Hg19::chr17:1972190..1972210,-#_79961b46028be97a5443b13b0603dd8fp@chr17:1972190..1972210, -
1.91e-15FFCP PHASE1:Hg19::chr6:83073074..83073093,+#_4b7b9265eeaf9d05a079186b1601ab2dp15@TPBG
1.91e-15FFCP PHASE2:Hg19::chr6:83073074..83073093,+#_4b7b9265eeaf9d05a079186b1601ab2dp15@TPBG
2.36e-15FFCP PHASE1:Hg19::chr11:102710966..102710986,-#_6fe2d15572e8c71159cb17d979a255d4p@chr11:102710966..102710986, -
2.36e-15FFCP PHASE2:Hg19::chr11:102710966..102710986,-#_6fe2d15572e8c71159cb17d979a255d4p@chr11:102710966..102710986, -
2.37e-15FFCP PHASE1:Hg19::chr3:120500144..120500155,+#_1761637c94c7846cbfc6a904da4652dep@chr3:120500144..120500155, +
2.37e-15FFCP PHASE2:Hg19::chr3:120500144..120500155,+#_1761637c94c7846cbfc6a904da4652dep@chr3:120500144..120500155, +
3.22e-15FFCP PHASE1:Hg19::chr14:75081582..75081595,-#_fb4392f986cfb1e5ad3a83321ce22efap@chr14:75081582..75081595, -
3.22e-15FFCP PHASE2:Hg19::chr14:75081582..75081595,-#_fb4392f986cfb1e5ad3a83321ce22efap@chr14:75081582..75081595, -
4.16e-15FFCP PHASE2:Hg19::chr14:38371323..38371347,-#_bcdb9f4434b9c1c6adbfd232e4de6799p1@ENST00000554257, p1@uc001wuk.1
4.16e-15FFCP PHASE1:Hg19::chr14:38371323..38371347,-#_bcdb9f4434b9c1c6adbfd232e4de6799p1@ENST00000554257, p1@uc001wuk.1
4.29e-15FFCP PHASE2:Hg19::chr2:238273001..238273016,+#_aa2b452b3c26b1516135c27caaa80c70p@chr2:238273001..238273016, +
4.29e-15FFCP PHASE1:Hg19::chr2:238273001..238273016,+#_aa2b452b3c26b1516135c27caaa80c70p@chr2:238273001..238273016, +
4.56e-15FFCP PHASE2:Hg19::chr6:35200689..35200695,+#_bc08e424b90beb1e54fd63cd2c2919e7p9@SCUBE3
4.56e-15FFCP PHASE1:Hg19::chr6:35200689..35200695,+#_bc08e424b90beb1e54fd63cd2c2919e7p9@SCUBE3
7.93e-15FFCP PHASE2:Hg19::chr3:170150547..170150552,+#_57b9e97ff0cad69d308f2422ff02fcb1p@chr3:170150547..170150552, +
7.93e-15FFCP PHASE1:Hg19::chr3:170150547..170150552,+#_57b9e97ff0cad69d308f2422ff02fcb1p@chr3:170150547..170150552, +
8.41e-15FFCP PHASE2:Hg19::chr5:14440848..14440864,+#_8c6a602aef7df982a865e40fa5a5e027p22@TRIO
8.41e-15FFCP PHASE1:Hg19::chr5:14440848..14440864,+#_8c6a602aef7df982a865e40fa5a5e027p22@TRIO
1.47e-14FFCP PHASE1:Hg19::chr6:11755328..11755345,-#_7bc14c1d2bbeb7d4e455f910d6324177p@chr6:11755328..11755345, -
1.47e-14FFCP PHASE2:Hg19::chr6:11755328..11755345,-#_7bc14c1d2bbeb7d4e455f910d6324177p@chr6:11755328..11755345, -
2.88e-14FFCP PHASE2:Hg19::chr6:35214004..35214032,+#_316e7ec7a15cc795e1da6dcd06a12234p@chr6:35214004..35214032, +
2.88e-14FFCP PHASE1:Hg19::chr6:35214004..35214032,+#_316e7ec7a15cc795e1da6dcd06a12234p@chr6:35214004..35214032, +
6.43e-14FFCP PHASE1:Hg19::chr6:35219318..35219336,+#_142d8690861a2b0b7f051cb3fe2f4e2ep3@AK123742
6.43e-14FFCP PHASE2:Hg19::chr6:35219318..35219336,+#_142d8690861a2b0b7f051cb3fe2f4e2ep3@AK123742
7.3e-14FFCP PHASE1:Hg19::chr11:102712990..102713003,-#_4ac02023fdcce11b8169886cb94a27bdp@chr11:102712990..102713003, -
7.3e-14FFCP PHASE2:Hg19::chr11:102712990..102713003,-#_4ac02023fdcce11b8169886cb94a27bdp@chr11:102712990..102713003, -
7.3e-14FFCP PHASE1:Hg19::chr3:55178388..55178399,-#_4ac02023fdcce11b8169886cb94a27bdp@chr3:55178388..55178399, -
7.3e-14FFCP PHASE2:Hg19::chr3:55178388..55178399,-#_4ac02023fdcce11b8169886cb94a27bdp@chr3:55178388..55178399, -
8.28e-14FFCP PHASE2:Hg19::chr6:31304866..31304870,-#_b43f5c866997ebe84b71d0d02d43eb64p@chr6:31304866..31304870, -
8.28e-14FFCP PHASE1:Hg19::chr6:31304866..31304870,-#_b43f5c866997ebe84b71d0d02d43eb64p@chr6:31304866..31304870, -
9.4e-14FFCP PHASE2:Hg19::chr1:45087872..45087892,+#_604f0f2826ea9e7bc8e6c3dfe587a142p@chr1:45087872..45087892, +
9.4e-14FFCP PHASE1:Hg19::chr1:45087872..45087892,+#_604f0f2826ea9e7bc8e6c3dfe587a142p@chr1:45087872..45087892, +
9.74e-14FFCP PHASE2:Hg19::chr8:27528869..27528882,+#_b00b5552b98ac20f47044573be36de71p@chr8:27528869..27528882, +
9.74e-14FFCP PHASE1:Hg19::chr8:27528869..27528882,+#_b00b5552b98ac20f47044573be36de71p@chr8:27528869..27528882, +