Personal tools

CL:0002678: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 14: Line 14:
|obo_creation_date=2011-08-25T03:17:34Z
|obo_creation_date=2011-08-25T03:17:34Z
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=

Latest revision as of 17:28, 26 June 2012

Name:memory regulatory T cell
Namespace:cell
Definition:"A CD4-positive, CD25-positive alpha-beta regulatory T cell that has encountered antigen." [GOC:tfm, PMID:21739668]
Comments:Cell has been described as being CD45RA-positive in human, but this doesn't fit with our current definition memory T cell.
Created by:tmeehan
Creation date:2011-08-25T03:17:34Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000792(CD4-positive, CD25-positive, alpha-beta regulatory T cell),CL:0000813(memory T cell)



Children


is a:FF:0011456 (CD4-positiveCD25-positiveCD45RA+ memory regulatory T cells expanded),FF:0011457 (CD4-positiveCD25-positiveCD45RA+ memory regulatory T cells)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.




Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002678 (memory regulatory T cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results for this cluster