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{{CL
{{CL
|id=CL:1000612
|alt_id=
|name=kidney corpuscule cell
|namespace=cell
|def=
|xref=KUPO:0001021
|is_a=CL:0002584
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:1000612
|is_a=CL:0002584 ;;CL:1000449
|is_obsolete=
|located_in=
|located_in=
|name=kidney corpuscule cell
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001229
|part_of=UBERON:0001229
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|preceded_by=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|subset=
|synonym=
|union_of=
|xref=KUPO:0001021
}}
}}

Latest revision as of 16:47, 12 September 2014

Name:kidney corpuscule cell
Namespace:FANTOM
Xrefs:
links:
KUPO:0001021


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0002584(renal cortical epithelial cell),CL:1000449(epithelial cell of nephron)
part_of:UBERON:0001229(renal corpuscle)



Children


is a:CL:1000746 (glomerular cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:1000612 (kidney corpuscule cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
6.87e-64FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_0bfdb6e55d95f72c1a465453b7041946p@chr2:120409486..120409492, +
6.87e-64FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_0bfdb6e55d95f72c1a465453b7041946p@chr2:120409486..120409492, +
9.62e-40FFCP PHASE1:Hg19::chr1:94713418..94713436,+#_2bcdb3d37c32d98e5b6e58671a442932p1@ENST00000413103
9.62e-40FFCP PHASE2:Hg19::chr1:94713418..94713436,+#_2bcdb3d37c32d98e5b6e58671a442932p1@ENST00000413103
1.16e-36FFCP PHASE2:Hg19::chr17:79426453..79426462,+#_9e9777055de224505469cadf31fdf681p@chr17:79426453..79426462, +
1.16e-36FFCP PHASE1:Hg19::chr17:79426453..79426462,+#_9e9777055de224505469cadf31fdf681p@chr17:79426453..79426462, +
1.31e-36FFCP PHASE1:Hg19::chr8:77557753..77557755,-#_ce9dece9ece0daea13add328789a1ad5p@chr8:77557753..77557755, -
1.31e-36FFCP PHASE2:Hg19::chr8:77557753..77557755,-#_ce9dece9ece0daea13add328789a1ad5p@chr8:77557753..77557755, -
5.58e-32FFCP PHASE2:Hg19::chr1:32042764..32042776,+#_0f36a8a947919688901eb15f9d085370p6@TINAGL1
5.58e-32FFCP PHASE1:Hg19::chr1:32042764..32042776,+#_0f36a8a947919688901eb15f9d085370p6@TINAGL1
1.53e-30FFCP PHASE1:Hg19::chr15:91416076..91416089,+#_20223f541d7a42d5270189d472a256abp9@FURIN
1.53e-30FFCP PHASE2:Hg19::chr15:91416076..91416089,+#_20223f541d7a42d5270189d472a256abp9@FURIN
3.83e-30FFCP PHASE2:Hg19::chr20:6034598..6034603,-#_d946f891c51626b6db123d943596c795p7@LRRN4
3.83e-30FFCP PHASE1:Hg19::chr20:6034598..6034603,-#_d946f891c51626b6db123d943596c795p7@LRRN4
1.78e-29FFCP PHASE1:Hg19::chr22:47030082..47030087,+#_4ef650ab95535b00a5be80bc1f44bdeap@chr22:47030082..47030087, +
1.78e-29FFCP PHASE2:Hg19::chr1:42777312..42777314,+#_4ef650ab95535b00a5be80bc1f44bdeap@chr1:42777312..42777314, +
1.78e-29FFCP PHASE2:Hg19::chr2:26700984..26700993,-#_4ef650ab95535b00a5be80bc1f44bdeap7@OTOF
1.78e-29FFCP PHASE2:Hg19::chr6:18225523..18225534,-#_4ef650ab95535b00a5be80bc1f44bdeap@chr6:18225523..18225534, -
1.78e-29FFCP PHASE2:Hg19::chr2:26700331..26700340,-#_4ef650ab95535b00a5be80bc1f44bdeap@chr2:26700331..26700340, -
1.78e-29FFCP PHASE1:Hg19::chr1:42777312..42777314,+#_4ef650ab95535b00a5be80bc1f44bdeap@chr1:42777312..42777314, +
1.78e-29FFCP PHASE1:Hg19::chr2:26700984..26700993,-#_4ef650ab95535b00a5be80bc1f44bdeap7@OTOF
1.78e-29FFCP PHASE1:Hg19::chr6:18225523..18225534,-#_4ef650ab95535b00a5be80bc1f44bdeap@chr6:18225523..18225534, -
1.78e-29FFCP PHASE2:Hg19::chr22:47030082..47030087,+#_4ef650ab95535b00a5be80bc1f44bdeap@chr22:47030082..47030087, +
1.78e-29FFCP PHASE1:Hg19::chr2:26700331..26700340,-#_4ef650ab95535b00a5be80bc1f44bdeap@chr2:26700331..26700340, -
7.96e-27FFCP PHASE2:Hg19::chr10:3477893..3477912,-#_56d5665b5591dbb299d6a5edcea7fb65p@chr10:3477893..3477912, -
7.96e-27FFCP PHASE1:Hg19::chr10:3477893..3477912,-#_56d5665b5591dbb299d6a5edcea7fb65p@chr10:3477893..3477912, -
6.29e-26FFCP PHASE1:Hg19::chr1:172926077..172926120,-#_7d65d4f373af415db783fe0440a89de8p@chr1:172926077..172926120, -
6.29e-26FFCP PHASE2:Hg19::chr1:172926077..172926120,-#_7d65d4f373af415db783fe0440a89de8p@chr1:172926077..172926120, -
6.32e-26FFCP PHASE1:Hg19::chrX:128782722..128782738,-#_01160fbc31a95732a31b477e357199cfp5@APLN
6.32e-26FFCP PHASE2:Hg19::chrX:128782722..128782738,-#_01160fbc31a95732a31b477e357199cfp5@APLN
9.89e-26FFCP PHASE1:Hg19::chr2:693380..693398,+#_e0acb2972d1cddb76014315cd7ebbb54p@chr2:693380..693398, +
9.89e-26FFCP PHASE2:Hg19::chr2:693380..693398,+#_e0acb2972d1cddb76014315cd7ebbb54p@chr2:693380..693398, +
1.28e-23FFCP PHASE2:Hg19::chr6:84849252..84849259,+#_117cbd8d55530dbf2b1d4d5bec404520p@chr6:84849252..84849259, +
1.28e-23FFCP PHASE2:Hg19::chr2:133426030..133426041,-#_117cbd8d55530dbf2b1d4d5bec404520p@chr2:133426030..133426041, -
1.28e-23FFCP PHASE1:Hg19::chr6:84849252..84849259,+#_117cbd8d55530dbf2b1d4d5bec404520p@chr6:84849252..84849259, +
1.28e-23FFCP PHASE1:Hg19::chr2:133426030..133426041,-#_117cbd8d55530dbf2b1d4d5bec404520p@chr2:133426030..133426041, -
1.44e-23FFCP PHASE2:Hg19::chr1:51791596..51791607,-#_6f264bb58973af5eafca5dff340f2235p23@TTC39A
1.44e-23FFCP PHASE2:Hg19::chr7:28998254..28998261,-#_6f264bb58973af5eafca5dff340f2235p10@TRIL
1.44e-23FFCP PHASE1:Hg19::chr1:51791596..51791607,-#_6f264bb58973af5eafca5dff340f2235p23@TTC39A
1.44e-23FFCP PHASE1:Hg19::chr7:28998254..28998261,-#_6f264bb58973af5eafca5dff340f2235p10@TRIL
1.61e-23FFCP PHASE1:Hg19::chr7:4051097..4051112,+#_7e560f9fb068a3d3288556bd208b90dcp@chr7:4051097..4051112, +
1.61e-23FFCP PHASE1:Hg19::chr15:85403302..85403304,+#_7e560f9fb068a3d3288556bd208b90dcp@chr15:85403302..85403304, +
1.61e-23FFCP PHASE2:Hg19::chr7:4051097..4051112,+#_7e560f9fb068a3d3288556bd208b90dcp@chr7:4051097..4051112, +
1.61e-23FFCP PHASE2:Hg19::chr15:85403302..85403304,+#_7e560f9fb068a3d3288556bd208b90dcp@chr15:85403302..85403304, +
1.8e-23FFCP PHASE1:Hg19::chr16:2141529..2141537,+#_fa60f09f2bffffe6b6e7acf6e792f15ep@chr16:2141529..2141537, +
1.8e-23FFCP PHASE2:Hg19::chr16:2141529..2141537,+#_fa60f09f2bffffe6b6e7acf6e792f15ep@chr16:2141529..2141537, +
2.92e-22FFCP PHASE2:Hg19::chr5:74244100..74244117,+#_51caae4a72d75d089973627c6b1598eep@chr5:74244100..74244117, +
2.92e-22FFCP PHASE1:Hg19::chr5:74244100..74244117,+#_51caae4a72d75d089973627c6b1598eep@chr5:74244100..74244117, +
5.69e-22FFCP PHASE2:Hg19::chr5:148651758..148651769,-#_aaea6f534c53600107d8e0e71b4bea5cp@chr5:148651758..148651769, -
5.69e-22FFCP PHASE1:Hg19::chr5:148651758..148651769,-#_aaea6f534c53600107d8e0e71b4bea5cp@chr5:148651758..148651769, -
2.9e-21FFCP PHASE2:Hg19::chr16:86768403..86768437,+#_6dff9deee217008654813094df98188bp@chr16:86768403..86768437, +
2.9e-21FFCP PHASE1:Hg19::chr16:86768403..86768437,+#_6dff9deee217008654813094df98188bp@chr16:86768403..86768437, +
4.78e-21FFCP PHASE2:Hg19::chr17:2076002..2076026,-#_3b407618c06357b04dcfb0b42968a4adp@chr17:2076002..2076026, -
4.78e-21FFCP PHASE1:Hg19::chr17:2076002..2076026,-#_3b407618c06357b04dcfb0b42968a4adp@chr17:2076002..2076026, -
1.26e-20FFCP PHASE1:Hg19::chr1:32712897..32712909,+#_aa3f312c6074d99c2c3ecefb0d269b01p3@FAM167B
1.26e-20FFCP PHASE2:Hg19::chr1:32712897..32712909,+#_aa3f312c6074d99c2c3ecefb0d269b01p3@FAM167B
2.32e-20FFCP PHASE1:Hg19::chr11:124628392..124628427,-#_416ce3649f586b64fdb324bc867f513fp@chr11:124628392..124628427, -
2.32e-20FFCP PHASE2:Hg19::chr11:124628392..124628427,-#_416ce3649f586b64fdb324bc867f513fp@chr11:124628392..124628427, -
3.42e-20FFCP PHASE1:Hg19::chr3:98591021..98591026,-#_ebe203b5b6c159e35322ef4e31a6e1e4p1@ENST00000487339
3.42e-20FFCP PHASE2:Hg19::chr3:98591021..98591026,-#_ebe203b5b6c159e35322ef4e31a6e1e4p1@ENST00000487339
3.44e-20FFCP PHASE2:Hg19::chr19:47231340..47231383,-#_61809778daea180a80523bcdec484a72p@chr19:47231340..47231383, -
3.44e-20FFCP PHASE1:Hg19::chr19:47231340..47231383,-#_61809778daea180a80523bcdec484a72p@chr19:47231340..47231383, -
3.58e-20FFCP PHASE1:Hg19::chr19:1826957..1826984,-#_47e75f0399974389d88e57fbf1740ab7p@chr19:1826957..1826984, -
3.58e-20FFCP PHASE2:Hg19::chr19:1826957..1826984,-#_47e75f0399974389d88e57fbf1740ab7p@chr19:1826957..1826984, -
4.39e-20FFCP PHASE1:Hg19::chr4:38057595..38057624,-#_8c271299c8e364cf187dd0d605537013p@chr4:38057595..38057624, -
4.39e-20FFCP PHASE2:Hg19::chr4:38057595..38057624,-#_8c271299c8e364cf187dd0d605537013p@chr4:38057595..38057624, -
7.13e-20FFCP PHASE1:Hg19::chr2:133426106..133426117,-#_6b4dc059571713b55c0e746f3a2748fdp@chr2:133426106..133426117, -
7.13e-20FFCP PHASE2:Hg19::chr2:133426106..133426117,-#_6b4dc059571713b55c0e746f3a2748fdp@chr2:133426106..133426117, -
7.84e-20FFCP PHASE2:Hg19::chr9:35753821..35753835,-#_74fd0ab2bb91f30012fdfb01137921f0p@chr9:35753821..35753835, -
7.84e-20FFCP PHASE1:Hg19::chr15:36653709..36653720,-#_74fd0ab2bb91f30012fdfb01137921f0p@chr15:36653709..36653720, -
7.84e-20FFCP PHASE2:Hg19::chr15:36653709..36653720,-#_74fd0ab2bb91f30012fdfb01137921f0p@chr15:36653709..36653720, -
7.84e-20FFCP PHASE1:Hg19::chr9:35753821..35753835,-#_74fd0ab2bb91f30012fdfb01137921f0p@chr9:35753821..35753835, -
8.62e-20FFCP PHASE2:Hg19::chr4:145568170..145568180,-#_1810a571ef388255d195d9af843c9859p@chr4:145568170..145568180, -
8.62e-20FFCP PHASE1:Hg19::chr4:145568170..145568180,-#_1810a571ef388255d195d9af843c9859p@chr4:145568170..145568180, -
1.04e-19FFCP PHASE1:Hg19::chr19:38397228..38397266,-#_bae9e6d8acd60fb88378805b277d1319p1@WDR87
1.04e-19FFCP PHASE2:Hg19::chr19:38397228..38397266,-#_bae9e6d8acd60fb88378805b277d1319p1@WDR87
1.15e-19FFCP PHASE1:Hg19::chr14:91270270..91270281,-#_7fb5415f41f9b715d5d72bcc0240a37fp@chr14:91270270..91270281, -
1.15e-19FFCP PHASE2:Hg19::chr14:91270270..91270281,-#_7fb5415f41f9b715d5d72bcc0240a37fp@chr14:91270270..91270281, -
2.44e-19FFCP PHASE1:Hg19::chr12:52306196..52306215,+#_967e3a26bd953610ae5ac1439db6fd96p6@ACVRL1
2.44e-19FFCP PHASE2:Hg19::chr12:52306196..52306215,+#_967e3a26bd953610ae5ac1439db6fd96p6@ACVRL1
3.27e-19FFCP PHASE1:Hg19::chr3:43538305..43538325,-#_58711ffe18372530515ac16c78f9fa21p@chr3:43538305..43538325, -
3.27e-19FFCP PHASE2:Hg19::chr3:43538305..43538325,-#_58711ffe18372530515ac16c78f9fa21p@chr3:43538305..43538325, -
4.64e-19FFCP PHASE2:Hg19::chr17:171147..171161,+#_ffa3ad2621e0ab965c5ff9eca48523ccp@chr17:171147..171161, +
4.64e-19FFCP PHASE1:Hg19::chr17:171147..171161,+#_ffa3ad2621e0ab965c5ff9eca48523ccp@chr17:171147..171161, +
5.39e-19FFCP PHASE2:Hg19::chr1:22211913..22211920,+#_87e8a2ee97b501fc9a0d03610add198ap@chr1:22211913..22211920, +
5.39e-19FFCP PHASE1:Hg19::chr1:22211913..22211920,+#_87e8a2ee97b501fc9a0d03610add198ap@chr1:22211913..22211920, +
1.99e-18FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_3bfc5e9f1c11acca8bd3f308c144bff1p7@HOXA10
1.99e-18FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_3bfc5e9f1c11acca8bd3f308c144bff1p7@HOXA10
2.69e-18FFCP PHASE1:Hg19::chr1:32041957..32041990,+#_53017bfa21f4851125d8eeb8f3c43cf9p3@TINAGL1
2.69e-18FFCP PHASE2:Hg19::chr1:32041957..32041990,+#_53017bfa21f4851125d8eeb8f3c43cf9p3@TINAGL1
4.1e-18FFCP PHASE2:Hg19::chr6:132270228..132270243,-#_eff30da5a6ddef64bb91eb219546a977p17@CTGF
4.1e-18FFCP PHASE1:Hg19::chr6:132270228..132270243,-#_eff30da5a6ddef64bb91eb219546a977p17@CTGF
5.7e-18FFCP PHASE1:Hg19::chr11:940729..940745,+#_bd4c11c9ed14173e8d475889236f6715p5@AP2A2
5.7e-18FFCP PHASE2:Hg19::chr11:940729..940745,+#_bd4c11c9ed14173e8d475889236f6715p5@AP2A2
6.5e-18FFCP PHASE1:Hg19::chr19:42007093..42007107,-#_7979e0d7c10e333ab9763906776b0cabp@chr19:42007093..42007107, -
6.5e-18FFCP PHASE2:Hg19::chr19:42007093..42007107,-#_7979e0d7c10e333ab9763906776b0cabp@chr19:42007093..42007107, -
6.99e-18FFCP PHASE1:Hg19::chrX:128781853..128781866,-#_ba57cc41b4072a84a6772cd35842109bp@chrX:128781853..128781866, -
6.99e-18FFCP PHASE2:Hg19::chrX:128781853..128781866,-#_ba57cc41b4072a84a6772cd35842109bp@chrX:128781853..128781866, -
1.24e-17FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_241f3dc2fe0d7276ffaae22ff85e3722p@chr16:86604624..86604648, +
1.24e-17FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_241f3dc2fe0d7276ffaae22ff85e3722p@chr16:86604624..86604648, +

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