Personal tools

Coexpression cluster:C2741: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|tf_chipseq_enrich=BATF#10538;3:18.2683513442277:0.000268166010572129:0.00286780565002484!BCL11A#53335;4:28.3694551036071:1.542446414682e-06:5.89862911398658e-05!BCLAF1#9774;2:10.8263238050609:0.0120220381643258:0.043662875359717!CHD2#1106;3:7.75801712558764:0.00335152246453634:0.0173059257724568!EBF1#1879;4:8.906466846569:0.0001588790747201:0.00199917731140874!EP300#2033;4:6.7739417262232:0.000474845982144264:0.00434830684166285!HNF4A#3172;2:11.5661451814768:0.0105758568176249:0.0390763429624259!HNF4G#3174;2:14.3767112632234:0.00692416998043918:0.0293095038538924!IRF4#3662;3:16.4358845150581:0.000366943139555461:0.003659585041256!MEF2A#4205;4:18.7432309096441:8.0978922767748e-06:0.000224571367895402!MEF2C#4208;3:30.983515869468:5.56692972943475e-05:0.00094185092177618!NFKB1#4790;4:5.48806342419384:0.00110219956630198:0.0076885266166853!PAX5#5079;4:6.66956553117783:0.000505277416948326:0.00444571761993818!PBX3#5090;2:10.9572563433721:0.0117453018068803:0.0428590047660381!POU2F2#5452;4:9.10612405774252:0.00014539566517493:0.00188539581266507!SP1#6667;4:5.6983813781409:0.000948260606533398:0.00685223756214914!SPI1#6688;4:8.20432350852273:0.00022066188152768:0.00249709678674498!TCF12#6938;3:7.97584867663982:0.00309092039601307:0.0162863949971853
|tf_chipseq_enrich=BATF#10538;3:18.2683513442277:0.000268166010572129:0.00286780565002484!BCL11A#53335;4:28.3694551036071:1.542446414682e-06:5.89862911398658e-05!BCLAF1#9774;2:10.8263238050609:0.0120220381643258:0.043662875359717!CHD2#1106;3:7.75801712558764:0.00335152246453634:0.0173059257724568!EBF1#1879;4:8.906466846569:0.0001588790747201:0.00199917731140874!EP300#2033;4:6.7739417262232:0.000474845982144264:0.00434830684166285!HNF4A#3172;2:11.5661451814768:0.0105758568176249:0.0390763429624259!HNF4G#3174;2:14.3767112632234:0.00692416998043918:0.0293095038538924!IRF4#3662;3:16.4358845150581:0.000366943139555461:0.003659585041256!MEF2A#4205;4:18.7432309096441:8.0978922767748e-06:0.000224571367895402!MEF2C#4208;3:30.983515869468:5.56692972943475e-05:0.00094185092177618!NFKB1#4790;4:5.48806342419384:0.00110219956630198:0.0076885266166853!PAX5#5079;4:6.66956553117783:0.000505277416948326:0.00444571761993818!PBX3#5090;2:10.9572563433721:0.0117453018068803:0.0428590047660381!POU2F2#5452;4:9.10612405774252:0.00014539566517493:0.00188539581266507!SP1#6667;4:5.6983813781409:0.000948260606533398:0.00685223756214914!SPI1#6688;4:8.20432350852273:0.00022066188152768:0.00249709678674498!TCF12#6938;3:7.97584867663982:0.00309092039601307:0.0162863949971853
|tfbs_overrepresentation=0.191353,0.0774498,0.814139,0.0631091,0.257053,0.363996,0.0569281,0.160638,0.043387,0.0341265,0.181435,0.288577,0.243414,0.164339,0.193153,0.0816702,0.183412,0.128744,0.0698403,0.141416,0.243245,0.172742,0.107781,0.124486,0.0550418,0.276459,0.268949,0.119094,0.186914,0.122514,0.26347,0.149094,0.0239693,0.267529,0.0877018,0.111013,0.788552,0.0568767,0.157159,0.0879352,0.126525,0.0326801,0.182216,0.2375,0.157881,0.0480278,0.0503649,0.234372,0.145553,0.158244,0.19996,0.0715789,0.0924421,0.12203,0.255843,0.0508907,0.140644,0.273035,0.103044,0.138225,0.0390464,0.194086,0.142115,0.0999599,0.0720888,0.0667453,0.439574,0.0792005,0.113084,0.216289,0.470097,0.0892037,0.116917,0.155921,0.00995563,0.0227583,0.126543,0.0578308,0.0493551,0.00965832,0.125428,0.290468,0.0562614,0.150119,0.368178,0.320801,0.0848546,0.268505,0.713984,0.0827752,0.112676,0.0655645,0.12511,0.0626609,0.112199,0.150351,0.690341,0.199405,0.121709,0.347653,0.0759036,0.350158,0.184542,0.0491142,0.0437659,0.0541957,0.0883058,0.423154,0.187509,0.34189,0.23573,0.0450707,0.194256,0.0235108,0.132631,0.0447483,0.0270258,0.0748174,0.180926,0.110194,0.215858,0.275495,0.182323,0.112709,0.134107,0.228632,0.119051,0.0196757,0.110868,0.175735,0.078637,0.0985137,0.0755515,0.0302655,0.164103,0.141472,0.085537,0.0730922,0.0438087,0.0052702,0.0302521,0.166414,0.262198,0.202388,0.701894,0.0913381,0.129544,0.110696,0.0515825,0.157774,0.258146,0.186826,0.233377,0.0352845,0.0565357,0.153577,0.0984158,0.29227,0.0683304,0.0447121,0.291455,0.124982,0.152417,0.192028,0.346873,0.149398,0.0530169,0.166112,0.0534404,0.392741,0.2321,0.179282,0.564569,0.0715212,0.105131,0.118265,0.182591,0.234755,0.230552,0.0472274,0.205973,0.159869,0.0363736,0.15105,0.0970713,0.155237,0.236268,0.0532055,0.108938,0.224443,0.140245,0.241581,0.160458,0.292792,0.147332,0.0622664,0.102951,0.0795624,0.0891668,0.14349,0.117261,0.0797088,0.0408965,0.0799774,0.177664,0.329956,0.346995,0.197158,0.265132,0.230439,0.0606832,0.136664,0.158184,0.147626,0.393313,0.218801,0.21271,0.132273,0.0830988,0.134907,0.184613,0.462724,0.202467,0.208718,0.0972471,0.165147,0.180711,0.112956,0.0797807,0.0790532,0.675167,0.476758,0.0553945,0.10068,0.125804,0.122288,0.0624687,0.334388,0.21183,0.275612,0.235571,0.435782,0.128998,0.109226,0.151958,0.178155,0.107176,0.146021,0.463127,0.15291,0.206234,0.238926,0.239646,0.128521,0.1286,0.207017,0.14037,0.259646,0.0916845,0.687863,0.0816983,0.226367,0.211672,0.167038,0.0457509,0.106603,0.106727,0.12083,0.154253,0.0993998,0.352707,0.0834863,0.324356,0.545829,0.113754,0.0504034,0.169684,0.327364,0.810881,0.603871,0.389734,0.668426,0.901171,0.644298,0.420045,0.381628,0.332539,0.545329,0.464128,0.389374,0.22808,0.414547,0.489273,0.413223,0.639461,0.720642,0.34505,0.369161,0.500422,0.49089,0.323639,0.702495,0.241524,0.45167,0.234628,0.520726,0.143893,0.41477,0.279946,0.524104,0.467825,0.563725,0.751064,0.632838,0.624969,0.460819,0.511459,0.586668,0.322903,0.350886,0.380582,0.218919,0.0926754,0.286293,0.606558,0.708425,0.359128,0.395864,0.683133,0.368633,0.188516,0.682118,0.162437,0.0789041,0.578349,0.537928,0.464342,0.683088,0.714007,0.235444,0.804772,0.899283,0.840703,0.349116,0.302142,0.239545,0.432689,0.272581,0.343881,0.377117,0.606382,0.617741,0.626346,0.316925,0.356561,0.573659,0.211506,0.0883859,0.0962508,0.0310083,0.70198,0.853221,0.6873,0.508325,0.0636247,0.651927,0.656755,0.54723,0.280307,0.393583,0.794849,0.0596868,0.0984075,0.293026,0.753513,0.694744,0.605423,0.372182,0.429205,0.578951,0.365653,0.41035,0.784024,0.35234,0.888839,0.525923,0.291917,0.421082,0.25441,0.202782,0.672876,0.166182,0.584705,0.517001,0.252778,0.926442,0.419676,0.188259,0.189182,0.138387,0.46699,0.546448,0.560187,0.321282,0.198207,0.0616078,0.178485,0.329745,0.175552,0.129238,0.283924,0.370995,0.360161,0.429696,0.386216,0.385297,0.706685,0.239407,0.627185,0.360203,0.333725,0.447838,0.289666,0.153861,0.513045,0.122807,0.565545,0.845507,0.265037,0.629795,0.167853,0.53531,0.341771,0.0186884,0.657528,0.0727712,0.184395,0.55524,0.624689,0.206945,0.0520267,0.462531,0.296994,0.244339,0.117049,0.0786167,0.261511,0.729876,0.433821,0.64428,0.436806,0.576549,0.499072,0.744662,0.734628,0.397546,0.0919254,0.0735469,0.248103,0.102621,0.0760107,0.187642,0.286156,0.261868,0.541583,0.540322,0.247151,0.146385,0.365815,0.0576261,0.382413,0.164977,0.175633,0.139918,0.34669,0.0828344,0.4729,0.0238089,0.383126,0.354433,0.48311,0.0614918,0.219485,0.149782,0.136923,0.118103,0.113892,0.207214,0.140201,0.0580534,0.00518407,0.161297,0.168389,0.270152,0.249506,0.432751,0.0660736,0.108971,0.0879235,0.235214,0.145546,0.28124,0.417003,0.251882,0.172263,0.243319,0.0637178,0.257309,0.500692,0.166608,0.227224,0.238082,0.219023,0.115115,0.124916,0.0149794,0.28498,0.140114,0.348988,0.00641248,0.224626,0.183585,0.271662,0.03989,0.171436,0.05892,0.0691994,0.268299,0.198844,0.104946,0.127738,0.207615,0.161213,0.118999,0.0737069,0.357807,0.621787,0.178782,0.019419,0.0866228,0.271849,0.282657,0.105411,0.0997542,0.209692,0.248936,0.0725263,0.102587,0.0742013,0.0552936,0.0457886,0.0514927,0.324236,0.0262915,0.258624,0.064656,0.226143,0.460406,0.0438521,0.435508,0.281453,0.0522771,0.0787278,0.515487,0.159873,0.142462,0.143935,0.332403,0.0379537,0.6545,0.187953,0.051459,0.114868,0.0726892,0.18732,0.32305,0.278397,0.245002,0.170848,0.487259,0.302909,0.363016,0.100188,0.223102,0.107653,0.235857,0.419621,0.191914,0.184022,0.216557,0.182956,0.116818,0.389792,0.36316,0.0625685,0.124464,0.544477,0.173134,0.101893,0.142875,0.167635,0.171311,0.787798,0.548036,0.0685131,0.130287,0.0661526,0.0815772,0.0993937,0.122878,0.187329,0.0451012,0.0976639,0.351199,0.833813,0.415079,0.278645,0.365775,0.155708,0.248017,0.22995,0.652972,0.0760151,0.0629459,0.486024,0.0803251,0.226641,0.379174,0.0939463,0.286748,0.367925,0.0471607,0.163865,0.226359,0.960445,0.974549,0.265324,0.279778,0.141699,0.0887743,0.142302,0.0653269,0.125712,0.264432,0.0994829,0.0604041,0.144185,0.0925862,0.289561,0.199201,0.049937,0.172796,0.0595495,0.071232,0.149346,0.121978,0.22302,0.137423,0.284016,0.0754883,0.299492,0.100006,0.362866,0.197817,0.251078,0.279874,0.133127,0.410303,0.223717,0.426452,0.196838,0.0826805,0.246601,0.193021,0.608002,0.202165,0.0946865,0.120618,0.079499,0.18762,0.195618,0.127688,0.201169,0.220353,0.24948,0.178639,0.291976,0.320355,0.364334,0.15547,0.110256,0.415419,0.14794,0.147307,0.240761,0.225961,0.124417,0.335582,0.317428,0.182843,0.130771,0.327768,0.135777,0.147842,0.0339286,0.217363,0.119015,0.32805,0.21618,0.243266,0.107021,0.238657,0.20272,0.392453,0.61565,0.0780061,0.315336,0.230477,0.279823,0.295555,0.502112,0.724669,0.0478217,0.507599,0.170854,0.0575231,0.174063,0.514243,0.459091,0.54832,0.154964,0.296013,0.282366,0.0434876,0.459994,0.523209,0.548059,0.25423,0.490559,0.0229254,0.500698,0.472542,0.685908,0.160788,0.174869,0.818701,0.483077,0.224887,0.603763,0.184287,0.0778742,0.938109,0.934991,0.290703,0.622694,0.722684,0.478691,0.360199,0.608176,0.657141,0.824761,0.365494,0.212703,0.56318,0.364079,0.680099,0.579886,0.421038,0.206595,0.328518,0.545608,0.310552,0.865054,0.483764,0.829658,0.784052,0.209437,0.843495,0.748403,0.598945,0.882403,0.464001,0.871271,0.579004,0.870272,0.839946,0.860705,0.261575,0.257956,0.264245,0.379063,0.326516,0.522925,0.436016,0.475063,0.202522,0.183837,0.507324,0.126097,0.3955,0.442469,0.212239,0.294954,0.156999,0.0742603,0.301684,0.39549,0.234254,0.357409,0.86719,0.721266,0.50338,0.620526,0.404625,0.416164,0.424691,0.715362,0.479581,0.62689,0.884725,0.642173,0.284496,0.512545,0.512178,0.201413,0.829402,0.684899,0.263302,0.552023,0.180735,0.775168,0.216102,0.254659,0.109605,0.397869,0.582542,0.226491,0.417131,0.463987,0.627953,0.0342559,0.124057,0.639483,0.483658,0.122467,0.301581,0.261657,0.346776,0.466529,0.187223,0.438176,0.349112,0.741477,0.385425,0.307816,0.461541,0.386339,0.382854,0.598787,0.478745,0.24434,0.319747,0.136743,0.557967,0.608127,0.282281,0.245336,0.2536,0.246827,0.564333,0.70712,0.387134,0.559969,0.358813,0.668972,0.574252,0.148933,0.346636,0.457747,0.348802,0.476541,0.579645,0.447581,0.106831,0.254628,0.713293,0.479347,0.416962,0.264955,0.378333,0.738545,0.264038,0.22798,0.102495,0.350933,0.263896,0.0446972,0.24452,0.329284,0.242783,0.0947248,0.336551,0.210656,0.246234,0.211271,0.281295,0.267248,0.118257,0.125087,0.215123,0.321224,0.469461,0.325254,0.266651,0.546295,0.231754,0.249415,0.283107,0.285648,0.427316,0.391071,0.279553,0.25563,0.240967,0.160955,0.036192,0.0432189,0.122439,0.16188,0.23235,0.290415,0.353147,0.112422,0.170886,0.267687,0.315656,0.284866,0.0887542,0.267811,0.338547,0.147872,0.189388,0.293546,0.210125,0.292967,0.218414,0.0509944,0.0871471,0.0689852,0.0602698,0.341188,0.259328,0.437467,0.201057,0.15696,0.129351,0.141936,0.0786166,0.276997,0.205513,0.282389,0.251421,0.162089,0.330223,0.387837,0.233244,0.207281,0.327401,0.195748,0.27845,0.161712,0.237871,0.239139,0.095257,0.328852,0.332769,0.262022,0.274403,0.266687,0.184534,0.248707,0.31749,0.15156,0.287598,0.313858,0.223773,0.25788,0.0176484,0.253768,0.30702,0.202977,0.170837,0.327002,0.28543,0.222656,0.028353,0.127111,0.259989,0.390754,0.355805,0.279739,0.108118,0.259901,0.139723,0.0708274,0.0710478,0.196248,0.102645,0.0539258,0.0709978,0.401939,0.332746,0.271338,0.242121,0.298673,0.244395,0.106889,0.128632,0.0845989,0.159153,0.0842401,0.13698,0.0874421,0.100355,0.167854,0.142846,0.0583767,0.088258,0.117657,0.0486914,0.175784,0.262778,0.373453,0.362662,0.433518,0.184359,0.334474,0.325785,0.0364266,0.291176,0.376537,0.322827,0.229571,0.359036,0.0641033,0.171704,0.208256,0.265058,0.256405,0.362898,0.302133,0.40806,0.151361,0.279606,0.0457079,0.150674,0.251128,0.246177,0.0103202,0.35852,0.318525,0.213257,0.287217,0.122782,0.410951,0.289049,0.266974,0.125746,0.112897,0.398354,0.222091,0.205977,0.34423,0.0936726,0.0671916,0.132374,0.285122,0.22741,0.203996,0.0424072,0.321965,0.264707,0.121257
|tfbs_overrepresentation=0.191353,0.0774498,0.814139,0.0631091,0.257053,0.363996,0.0569281,0.160638,0.043387,0.0341265,0.181435,0.288577,0.243414,0.164339,0.193153,0.0816702,0.183412,0.128744,0.0698403,0.141416,0.243245,0.172742,0.107781,0.124486,0.0550418,0.276459,0.268949,0.119094,0.186914,0.122514,0.26347,0.149094,0.0239693,0.267529,0.0877018,0.111013,0.788552,0.0568767,0.157159,0.0879352,0.126525,0.0326801,0.182216,0.2375,0.157881,0.0480278,0.0503649,0.234372,0.145553,0.158244,0.19996,0.0715789,0.0924421,0.12203,0.255843,0.0508907,0.140644,0.273035,0.103044,0.138225,0.0390464,0.194086,0.142115,0.0999599,0.0720888,0.0667453,0.439574,0.0792005,0.113084,0.216289,0.470097,0.0892037,0.116917,0.155921,0.00995563,0.0227583,0.126543,0.0578308,0.0493551,0.00965832,0.125428,0.290468,0.0562614,0.150119,0.368178,0.320801,0.0848546,0.268505,0.713984,0.0827752,0.112676,0.0655645,0.12511,0.0626609,0.112199,0.150351,0.690341,0.199405,0.121709,0.347653,0.0759036,0.350158,0.184542,0.0491142,0.0437659,0.0541957,0.0883058,0.423154,0.187509,0.34189,0.23573,0.0450707,0.194256,0.0235108,0.132631,0.0447483,0.0270258,0.0748174,0.180926,0.110194,0.215858,0.275495,0.182323,0.112709,0.134107,0.228632,0.119051,0.0196757,0.110868,0.175735,0.078637,0.0985137,0.0755515,0.0302655,0.164103,0.141472,0.085537,0.0730922,0.0438087,0.0052702,0.0302521,0.166414,0.262198,0.202388,0.701894,0.0913381,0.129544,0.110696,0.0515825,0.157774,0.258146,0.186826,0.233377,0.0352845,0.0565357,0.153577,0.0984158,0.29227,0.0683304,0.0447121,0.291455,0.124982,0.152417,0.192028,0.346873,0.149398,0.0530169,0.166112,0.0534404,0.392741,0.2321,0.179282,0.564569,0.0715212,0.105131,0.118265,0.182591,0.234755,0.230552,0.0472274,0.205973,0.159869,0.0363736,0.15105,0.0970713,0.155237,0.236268,0.0532055,0.108938,0.224443,0.140245,0.241581,0.160458,0.292792,0.147332,0.0622664,0.102951,0.0795624,0.0891668,0.14349,0.117261,0.0797088,0.0408965,0.0799774,0.177664,0.329956,0.346995,0.197158,0.265132,0.230439,0.0606832,0.136664,0.158184,0.147626,0.393313,0.218801,0.21271,0.132273,0.0830988,0.134907,0.184613,0.462724,0.202467,0.208718,0.0972471,0.165147,0.180711,0.112956,0.0797807,0.0790532,0.675167,0.476758,0.0553945,0.10068,0.125804,0.122288,0.0624687,0.334388,0.21183,0.275612,0.235571,0.435782,0.128998,0.109226,0.151958,0.178155,0.107176,0.146021,0.463127,0.15291,0.206234,0.238926,0.239646,0.128521,0.1286,0.207017,0.14037,0.259646,0.0916845,0.687863,0.0816983,0.226367,0.211672,0.167038,0.0457509,0.106603,0.106727,0.12083,0.154253,0.0993998,0.352707,0.0834863,0.324356,0.545829,0.113754,0.0504034,0.169684,0.327364,0.810881,0.603871,0.389734,0.668426,0.901171,0.644298,0.420045,0.381628,0.332539,0.545329,0.464128,0.389374,0.22808,0.414547,0.489273,0.413223,0.639461,0.720642,0.34505,0.369161,0.500422,0.49089,0.323639,0.702495,0.241524,0.45167,0.234628,0.520726,0.143893,0.41477,0.279946,0.524104,0.467825,0.563725,0.751064,0.632838,0.624969,0.460819,0.511459,0.586668,0.322903,0.350886,0.380582,0.218919,0.0926754,0.286293,0.606558,0.708425,0.359128,0.395864,0.683133,0.368633,0.188516,0.682118,0.162437,0.0789041,0.578349,0.537928,0.464342,0.683088,0.714007,0.235444,0.804772,0.899283,0.840703,0.349116,0.302142,0.239545,0.432689,0.272581,0.343881,0.377117,0.606382,0.617741,0.626346,0.316925,0.356561,0.573659,0.211506,0.0883859,0.0962508,0.0310083,0.70198,0.853221,0.6873,0.508325,0.0636247,0.651927,0.656755,0.54723,0.280307,0.393583,0.794849,0.0596868,0.0984075,0.293026,0.753513,0.694744,0.605423,0.372182,0.429205,0.578951,0.365653,0.41035,0.784024,0.35234,0.888839,0.525923,0.291917,0.421082,0.25441,0.202782,0.672876,0.166182,0.584705,0.517001,0.252778,0.926442,0.419676,0.188259,0.189182,0.138387,0.46699,0.546448,0.560187,0.321282,0.198207,0.0616078,0.178485,0.329745,0.175552,0.129238,0.283924,0.370995,0.360161,0.429696,0.386216,0.385297,0.706685,0.239407,0.627185,0.360203,0.333725,0.447838,0.289666,0.153861,0.513045,0.122807,0.565545,0.845507,0.265037,0.629795,0.167853,0.53531,0.341771,0.0186884,0.657528,0.0727712,0.184395,0.55524,0.624689,0.206945,0.0520267,0.462531,0.296994,0.244339,0.117049,0.0786167,0.261511,0.729876,0.433821,0.64428,0.436806,0.576549,0.499072,0.744662,0.734628,0.397546,0.0919254,0.0735469,0.248103,0.102621,0.0760107,0.187642,0.286156,0.261868,0.541583,0.540322,0.247151,0.146385,0.365815,0.0576261,0.382413,0.164977,0.175633,0.139918,0.34669,0.0828344,0.4729,0.0238089,0.383126,0.354433,0.48311,0.0614918,0.219485,0.149782,0.136923,0.118103,0.113892,0.207214,0.140201,0.0580534,0.00518407,0.161297,0.168389,0.270152,0.249506,0.432751,0.0660736,0.108971,0.0879235,0.235214,0.145546,0.28124,0.417003,0.251882,0.172263,0.243319,0.0637178,0.257309,0.500692,0.166608,0.227224,0.238082,0.219023,0.115115,0.124916,0.0149794,0.28498,0.140114,0.348988,0.00641248,0.224626,0.183585,0.271662,0.03989,0.171436,0.05892,0.0691994,0.268299,0.198844,0.104946,0.127738,0.207615,0.161213,0.118999,0.0737069,0.357807,0.621787,0.178782,0.019419,0.0866228,0.271849,0.282657,0.105411,0.0997542,0.209692,0.248936,0.0725263,0.102587,0.0742013,0.0552936,0.0457886,0.0514927,0.324236,0.0262915,0.258624,0.064656,0.226143,0.460406,0.0438521,0.435508,0.281453,0.0522771,0.0787278,0.515487,0.159873,0.142462,0.143935,0.332403,0.0379537,0.6545,0.187953,0.051459,0.114868,0.0726892,0.18732,0.32305,0.278397,0.245002,0.170848,0.487259,0.302909,0.363016,0.100188,0.223102,0.107653,0.235857,0.419621,0.191914,0.184022,0.216557,0.182956,0.116818,0.389792,0.36316,0.0625685,0.124464,0.544477,0.173134,0.101893,0.142875,0.167635,0.171311,0.787798,0.548036,0.0685131,0.130287,0.0661526,0.0815772,0.0993937,0.122878,0.187329,0.0451012,0.0976639,0.351199,0.833813,0.415079,0.278645,0.365775,0.155708,0.248017,0.22995,0.652972,0.0760151,0.0629459,0.486024,0.0803251,0.226641,0.379174,0.0939463,0.286748,0.367925,0.0471607,0.163865,0.226359,0.960445,0.974549,0.265324,0.279778,0.141699,0.0887743,0.142302,0.0653269,0.125712,0.264432,0.0994829,0.0604041,0.144185,0.0925862,0.289561,0.199201,0.049937,0.172796,0.0595495,0.071232,0.149346,0.121978,0.22302,0.137423,0.284016,0.0754883,0.299492,0.100006,0.362866,0.197817,0.251078,0.279874,0.133127,0.410303,0.223717,0.426452,0.196838,0.0826805,0.246601,0.193021,0.608002,0.202165,0.0946865,0.120618,0.079499,0.18762,0.195618,0.127688,0.201169,0.220353,0.24948,0.178639,0.291976,0.320355,0.364334,0.15547,0.110256,0.415419,0.14794,0.147307,0.240761,0.225961,0.124417,0.335582,0.317428,0.182843,0.130771,0.327768,0.135777,0.147842,0.0339286,0.217363,0.119015,0.32805,0.21618,0.243266,0.107021,0.238657,0.20272,0.392453,0.61565,0.0780061,0.315336,0.230477,0.279823,0.295555,0.502112,0.724669,0.0478217,0.507599,0.170854,0.0575231,0.174063,0.514243,0.459091,0.54832,0.154964,0.296013,0.282366,0.0434876,0.459994,0.523209,0.548059,0.25423,0.490559,0.0229254,0.500698,0.472542,0.685908,0.160788,0.174869,0.818701,0.483077,0.224887,0.603763,0.184287,0.0778742,0.938109,0.934991,0.290703,0.622694,0.722684,0.478691,0.360199,0.608176,0.657141,0.824761,0.365494,0.212703,0.56318,0.364079,0.680099,0.579886,0.421038,0.206595,0.328518,0.545608,0.310552,0.865054,0.483764,0.829658,0.784052,0.209437,0.843495,0.748403,0.598945,0.882403,0.464001,0.871271,0.579004,0.870272,0.839946,0.860705,0.261575,0.257956,0.264245,0.379063,0.326516,0.522925,0.436016,0.475063,0.202522,0.183837,0.507324,0.126097,0.3955,0.442469,0.212239,0.294954,0.156999,0.0742603,0.301684,0.39549,0.234254,0.357409,0.86719,0.721266,0.50338,0.620526,0.404625,0.416164,0.424691,0.715362,0.479581,0.62689,0.884725,0.642173,0.284496,0.512545,0.512178,0.201413,0.829402,0.684899,0.263302,0.552023,0.180735,0.775168,0.216102,0.254659,0.109605,0.397869,0.582542,0.226491,0.417131,0.463987,0.627953,0.0342559,0.124057,0.639483,0.483658,0.122467,0.301581,0.261657,0.346776,0.466529,0.187223,0.438176,0.349112,0.741477,0.385425,0.307816,0.461541,0.386339,0.382854,0.598787,0.478745,0.24434,0.319747,0.136743,0.557967,0.608127,0.282281,0.245336,0.2536,0.246827,0.564333,0.70712,0.387134,0.559969,0.358813,0.668972,0.574252,0.148933,0.346636,0.457747,0.348802,0.476541,0.579645,0.447581,0.106831,0.254628,0.713293,0.479347,0.416962,0.264955,0.378333,0.738545,0.264038,0.22798,0.102495,0.350933,0.263896,0.0446972,0.24452,0.329284,0.242783,0.0947248,0.336551,0.210656,0.246234,0.211271,0.281295,0.267248,0.118257,0.125087,0.215123,0.321224,0.469461,0.325254,0.266651,0.546295,0.231754,0.249415,0.283107,0.285648,0.427316,0.391071,0.279553,0.25563,0.240967,0.160955,0.036192,0.0432189,0.122439,0.16188,0.23235,0.290415,0.353147,0.112422,0.170886,0.267687,0.315656,0.284866,0.0887542,0.267811,0.338547,0.147872,0.189388,0.293546,0.210125,0.292967,0.218414,0.0509944,0.0871471,0.0689852,0.0602698,0.341188,0.259328,0.437467,0.201057,0.15696,0.129351,0.141936,0.0786166,0.276997,0.205513,0.282389,0.251421,0.162089,0.330223,0.387837,0.233244,0.207281,0.327401,0.195748,0.27845,0.161712,0.237871,0.239139,0.095257,0.328852,0.332769,0.262022,0.274403,0.266687,0.184534,0.248707,0.31749,0.15156,0.287598,0.313858,0.223773,0.25788,0.0176484,0.253768,0.30702,0.202977,0.170837,0.327002,0.28543,0.222656,0.028353,0.127111,0.259989,0.390754,0.355805,0.279739,0.108118,0.259901,0.139723,0.0708274,0.0710478,0.196248,0.102645,0.0539258,0.0709978,0.401939,0.332746,0.271338,0.242121,0.298673,0.244395,0.106889,0.128632,0.0845989,0.159153,0.0842401,0.13698,0.0874421,0.100355,0.167854,0.142846,0.0583767,0.088258,0.117657,0.0486914,0.175784,0.262778,0.373453,0.362662,0.433518,0.184359,0.334474,0.325785,0.0364266,0.291176,0.376537,0.322827,0.229571,0.359036,0.0641033,0.171704,0.208256,0.265058,0.256405,0.362898,0.302133,0.40806,0.151361,0.279606,0.0457079,0.150674,0.251128,0.246177,0.0103202,0.35852,0.318525,0.213257,0.287217,0.122782,0.410951,0.289049,0.266974,0.125746,0.112897,0.398354,0.222091,0.205977,0.34423,0.0936726,0.0671916,0.132374,0.285122,0.22741,0.203996,0.0424072,0.321965,0.264707,0.121257
|tfbs_overrepresentation_for_novel_motifs=0.590005,0.0888524,0.581696,0.741427,0.534346,0.739643,0.821651,0.395818,1.01802,0.151681,0.706765,0.867962,0.341754,0.809319,0.532789,0.559384,1.05593,0.471262,0.356737,0.223552,0.581762,0.505745,0.731221,1.3102,0.632849,0.892087,0.316693,0.728867,0.537869,0.297585,0.682839,1.09415,0.433165,0.344471,0.49475,0.0842336,0.491074,0.740899,0.463978,0.371755,1.23481,0.66492,0.183156,0.53106,0.314427,0.61613,0.822818,0.694903,0.173425,0.538016,0.90714,0.83543,0.25073,1.17354,1.33024,0.812467,0.54284,0.777235,0.297448,0.776148,1.13655,0.825354,1.0193,1.02706,0.844545,0.991076,1.42026,1.79268,1.08337,1.62905,0.650393,0.402607,0.248021,1.32819,0.336329,0.321165,0.305238,1.00941,1.08,0.62601,1.69485,1.02594,0.844168,0.399165,1.27559,0.109222,0.221873,0.793068,0.934646,1.89266,1.51507,1.24792,1.11156,0.441618,0.535192,1.15724,0.354969,1.15558,0.939507,0.272395,2.04634,1.1057,1.14983,1.05974,0.979006,0.701817,1.04326,0.805616,0.632569,0.516141,0.594299,1.14697,1.40954,0.717043,1.46636,0.489254,0.393155,0.681522,0.988625,0.444962,1.31973,0.932085,0.736652,0.856196,1.57854,1.0102,0.814847,1.11673,1.36323,0.458105,1.24863,0.68598,1.37788,0.852645,1.52813,0.283547,0.676268,0.729481,1.48509,2.34913,1.94535,1.44718,0.8167,1.15194,0.980848,0.768101,0.963351,2.1895,0.661255,0.437774,0.234974,0.175846,1.24902,0.383416,0.824835,1.65997,0.917558,0.518428,0.632914,0.600782,1.44595,1.23002,1.07918,0.604379,0.997702,0.843324,0.423521,0.820225,0.156682
}}
}}

Revision as of 15:41, 26 November 2012


Full id: C2741_B_CD14_splenic_immature_b_Mast_xeroderma



Phase1 CAGE Peaks

Hg19::chr3:47032417..47032436,+p@chr3:47032417..47032436
+
Hg19::chr7:20259717..20259736,-p@chr7:20259717..20259736
-
Hg19::chr9:128394685..128394703,-p@chr9:128394685..128394703
-
Hg19::chrX:13024034..13024045,+p@chrX:13024034..13024045
+


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data


No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data


No GOStat results

Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>


Cell Type
Ontology termp-valuen
classical monocyte2.17e-6542
CD14-positive, CD16-negative classical monocyte2.17e-6542
defensive cell1.73e-5648
phagocyte1.73e-5648
nongranular leukocyte1.34e-48115
leukocyte1.18e-47136
macrophage dendritic cell progenitor3.33e-4661
monopoietic cell5.06e-4459
monocyte5.06e-4459
monoblast5.06e-4459
promonocyte5.06e-4459
hematopoietic lineage restricted progenitor cell1.06e-43120
granulocyte monocyte progenitor cell1.36e-4167
hematopoietic cell4.53e-39177
myeloid lineage restricted progenitor cell8.20e-3966
myeloid leukocyte3.82e-3872
hematopoietic stem cell3.64e-37168
angioblastic mesenchymal cell3.64e-37168
hematopoietic oligopotent progenitor cell9.16e-35161
hematopoietic multipotent progenitor cell9.16e-35161
stuff accumulating cell1.51e-2887
myeloid cell7.58e-28108
common myeloid progenitor7.58e-28108
mesenchymal cell1.52e-13354
connective tissue cell3.97e-13361
circulating cell3.78e-126
motile cell1.18e-11386
lymphocyte of B lineage1.67e-1124
pro-B cell1.67e-1124
multi fate stem cell7.48e-10427
somatic stem cell1.33e-09433
stem cell2.78e-09441
intermediate monocyte1.02e-089
CD14-positive, CD16-positive monocyte1.02e-089
lymphoid lineage restricted progenitor cell3.32e-0752
lymphocyte4.91e-0753
common lymphoid progenitor4.91e-0753
single nucleate cell6.47e-073
mononuclear cell6.47e-073
Uber Anatomy
Ontology termp-valuen
hematopoietic system2.78e-3998
blood island2.78e-3998
bone marrow5.01e-3676
hemolymphoid system4.76e-35108
bone element5.51e-3382
immune system5.69e-3193
skeletal element1.48e-2990
skeletal system4.95e-26100
lateral plate mesoderm1.58e-15203
musculoskeletal system2.84e-13167
connective tissue1.47e-12371
mesoderm1.24e-07315
mesoderm-derived structure1.24e-07315
presumptive mesoderm1.24e-07315


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data


Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data


(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)

TF#promotersEnrichmentp-valueq-value
BATF#10538318.26835134422770.0002681660105721290.00286780565002484
BCL11A#53335428.36945510360711.542446414682e-065.89862911398658e-05
BCLAF1#9774210.82632380506090.01202203816432580.043662875359717
CHD2#110637.758017125587640.003351522464536340.0173059257724568
EBF1#187948.9064668465690.00015887907472010.00199917731140874
EP300#203346.77394172622320.0004748459821442640.00434830684166285
HNF4A#3172211.56614518147680.01057585681762490.0390763429624259
HNF4G#3174214.37671126322340.006924169980439180.0293095038538924
IRF4#3662316.43588451505810.0003669431395554610.003659585041256
MEF2A#4205418.74323090964418.0978922767748e-060.000224571367895402
MEF2C#4208330.9835158694685.56692972943475e-050.00094185092177618
NFKB1#479045.488063424193840.001102199566301980.0076885266166853
PAX5#507946.669565531177830.0005052774169483260.00444571761993818
PBX3#5090210.95725634337210.01174530180688030.0428590047660381
POU2F2#545249.106124057742520.000145395665174930.00188539581266507
SP1#666745.69838137814090.0009482606065333980.00685223756214914
SPI1#668848.204323508522730.000220661881527680.00249709678674498
TCF12#693837.975848676639820.003090920396013070.0162863949971853



Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data


This analysis result is provided for C0 - C305 clusters.