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Coexpression cluster:C92

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Full id: C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole



Phase1 CAGE Peaks

Hg19::chr10:101379080..101379085,+p@chr10:101379080..101379085
+
Hg19::chr10:104556220..104556247,-p@chr10:104556220..104556247
-
Hg19::chr10:104556407..104556425,+p@chr10:104556407..104556425
+
Hg19::chr10:114594528..114594539,-p@chr10:114594528..114594539
-
Hg19::chr10:114885446..114885465,+p@chr10:114885446..114885465
+
Hg19::chr10:115070193..115070207,-p@chr10:115070193..115070207
-
Hg19::chr10:115080077..115080087,-p@chr10:115080077..115080087
-
Hg19::chr10:43609342..43609351,+p@chr10:43609342..43609351
+
Hg19::chr10:73473819..73473836,+p@chr10:73473819..73473836
+
Hg19::chr10:73534273..73534295,-p@chr10:73534273..73534295
-
Hg19::chr10:73588893..73588912,-p@chr10:73588893..73588912
-
Hg19::chr10:81742364..81742375,-p2@SFTPD
Hg19::chr11:117056662..117056716,+p7@SIDT2
Hg19::chr11:117056719..117056726,+p28@SIDT2
Hg19::chr11:117056730..117056740,+p15@SIDT2
Hg19::chr11:117056889..117056905,+p21@SIDT2
Hg19::chr11:122614916..122614928,+p@chr11:122614916..122614928
+
Hg19::chr11:2323009..2323021,-p7@C11orf21
Hg19::chr11:2905326..2905374,-p@chr11:2905326..2905374
-
Hg19::chr11:504207..504213,+p@chr11:504207..504213
+
Hg19::chr11:60146107..60146118,+p6@MS4A7
Hg19::chr11:67051186..67051245,+p3@ADRBK1
Hg19::chr11:67415202..67415246,-p5@ACY3
Hg19::chr12:117504933..117504940,-p@chr12:117504933..117504940
-
Hg19::chr12:121976319..121976333,-p@chr12:121976319..121976333
-
Hg19::chr12:123752764..123752835,-p7@CDK2AP1
Hg19::chr12:123752843..123752879,-p10@CDK2AP1
Hg19::chr12:12871327..12871345,+p@chr12:12871327..12871345
+
Hg19::chr12:29727591..29727616,-p@chr12:29727591..29727616
-
Hg19::chr14:101150099..101150117,+p@chr14:101150099..101150117
+
Hg19::chr14:101150133..101150145,+p@chr14:101150133..101150145
+
Hg19::chr14:105954292..105954314,+p7@CRIP1
Hg19::chr14:23282256..23282282,-p17@SLC7A7
Hg19::chr14:52782082..52782100,-p@chr14:52782082..52782100
-
Hg19::chr14:52782111..52782133,-p@chr14:52782111..52782133
-
Hg19::chr14:92927429..92927462,+p@chr14:92927429..92927462
+
Hg19::chr14:92927464..92927488,+p@chr14:92927464..92927488
+
Hg19::chr15:22538560..22538601,-p@chr15:22538560..22538601
-
Hg19::chr15:22550722..22550726,+p@chr15:22550722..22550726
+
Hg19::chr15:38296918..38296944,+p1@ENST00000557883
Hg19::chr15:75080883..75080890,+p14@CSK
Hg19::chr15:75422284..75422300,-p@chr15:75422284..75422300
-
Hg19::chr15:86098640..86098665,+p13@AKAP13
Hg19::chr16:1538765..1538796,-p1@PTX4
Hg19::chr16:1538881..1538887,+p@chr16:1538881..1538887
+
Hg19::chr16:17460967..17460974,-p@chr16:17460967..17460974
-
Hg19::chr16:19179856..19179908,+p2@SYT17
Hg19::chr16:30484090..30484101,+p4@ITGAL
Hg19::chr16:4563100..4563144,-p12@C16orf5
Hg19::chr16:50313353..50313370,+p@chr16:50313353..50313370
+
Hg19::chr16:67429107..67429142,-p@chr16:67429107..67429142
-
Hg19::chr16:67429148..67429159,-p@chr16:67429148..67429159
-
Hg19::chr16:67429168..67429188,-p@chr16:67429168..67429188
-
Hg19::chr16:68032947..68032953,+p@chr16:68032947..68032953
+
Hg19::chr16:85096580..85096602,+p3@KIAA0513
Hg19::chr17:40351201..40351230,+p@chr17:40351201..40351230
+
Hg19::chr17:47287786..47287800,-p@chr17:47287786..47287800
-
Hg19::chr17:47288020..47288029,+p3@ABI3
Hg19::chr17:48870630..48870661,+p@chr17:48870630..48870661
+
Hg19::chr17:531650..531657,-p@chr17:531650..531657
-
Hg19::chr17:531669..531692,-p@chr17:531669..531692
-
Hg19::chr17:531709..531723,-p@chr17:531709..531723
-
Hg19::chr17:61776536..61776553,-p@chr17:61776536..61776553
-
Hg19::chr17:61776579..61776588,-p@chr17:61776579..61776588
-
Hg19::chr17:61777090..61777112,-p7@LIMD2
Hg19::chr17:72439704..72439736,+p8@GPRC5C
Hg19::chr17:72563495..72563524,-p3@ENST00000425002
Hg19::chr17:72563552..72563583,-p1@ENST00000425002
Hg19::chr17:72563586..72563601,-p5@ENST00000425002
Hg19::chr17:72563622..72563633,-p4@ENST00000425002
Hg19::chr17:72563639..72563654,-p2@ENST00000425002
Hg19::chr17:72595953..72595966,+p@chr17:72595953..72595966
+
Hg19::chr17:72595971..72595990,+p@chr17:72595971..72595990
+
Hg19::chr17:72595995..72596020,+p@chr17:72595995..72596020
+
Hg19::chr17:75430998..75431040,+p@chr17:75430998..75431040
+
Hg19::chr17:75440858..75440875,+p1@ENST00000450721
Hg19::chr17:76123130..76123168,-p13@TMC6
Hg19::chr17:80064388..80064407,-p@chr17:80064388..80064407
-
Hg19::chr17:80843910..80843933,+p@chr17:80843910..80843933
+
Hg19::chr17:81103313..81103332,-p@chr17:81103313..81103332
-
Hg19::chr18:13569295..13569309,+p@chr18:13569295..13569309
+
Hg19::chr19:10959147..10959176,+p2@C19orf38
Hg19::chr19:14546214..14546245,+p@chr19:14546214..14546245
+
Hg19::chr19:14887911..14887932,-p3@EMR2
Hg19::chr19:18283959..18283993,+p@chr19:18283959..18283993
+
Hg19::chr19:18507990..18508011,-p3@LRRC25
Hg19::chr19:18529581..18529594,+p@chr19:18529581..18529594
+
Hg19::chr19:18529684..18529699,+p6@SSBP4
Hg19::chr19:36398384..36398407,+p@chr19:36398384..36398407
+
Hg19::chr19:47614483..47614496,-p@chr19:47614483..47614496
-
Hg19::chr19:47834063..47834081,+p@chr19:47834063..47834081
+
Hg19::chr19:50283657..50283673,+p@chr19:50283657..50283673
+
Hg19::chr19:50283684..50283702,+p@chr19:50283684..50283702
+
Hg19::chr19:50284801..50284815,+p@chr19:50284801..50284815
+
Hg19::chr19:50284821..50284856,+p@chr19:50284821..50284856
+
Hg19::chr19:50285177..50285181,+p@chr19:50285177..50285181
+
Hg19::chr19:54710115..54710150,+p@chr19:54710115..54710150
+
Hg19::chr19:55105085..55105136,+p1@LILRA1
Hg19::chr19:55128414..55128437,+p4@LILRB1
Hg19::chr19:55207635..55207643,+p@chr19:55207635..55207643
+
Hg19::chr1:112016594..112016617,+p1@C1orf162
Hg19::chr1:12185656..12185684,+p10@TNFRSF8
Hg19::chr1:12185997..12186018,+p5@TNFRSF8
Hg19::chr1:161519583..161519620,-p1@FCGR3A
Hg19::chr1:161519682..161519691,-p7@FCGR3A
Hg19::chr1:161600900..161600923,-p3@FCGR3B
p4@FCGR3A
Hg19::chr1:181104200..181104242,+p@chr1:181104200..181104242
+
Hg19::chr1:192128293..192128310,+p@chr1:192128293..192128310
+
Hg19::chr1:192128363..192128374,+p@chr1:192128363..192128374
+
Hg19::chr1:26186028..26186052,+p1@ENST00000455431
Hg19::chr1:26186058..26186081,+p2@ENST00000455431
Hg19::chr1:26634917..26634921,+p@chr1:26634917..26634921
+
Hg19::chr20:30793004..30793008,-p@chr20:30793004..30793008
-
Hg19::chr20:62708461..62708503,-p7@RGS19
Hg19::chr20:62711482..62711505,+p4@OPRL1
Hg19::chr20:825275..825293,+p3@FAM110A
Hg19::chr20:825297..825306,+p7@FAM110A
Hg19::chr20:825327..825342,+p4@FAM110A
Hg19::chr20:827656..827661,-p@chr20:827656..827661
-
Hg19::chr21:44765881..44765892,-p@chr21:44765881..44765892
-
Hg19::chr21:45232138..45232176,-p1@LOC284837
Hg19::chr21:45232423..45232443,-p2@LOC284837
Hg19::chr22:30714833..30714846,-p4@TBC1D10A
Hg19::chr2:219125714..219125758,+p1@GPBAR1
Hg19::chr2:219125814..219125822,+p3@GPBAR1
Hg19::chr2:219125838..219125849,+p2@GPBAR1
Hg19::chr2:238600416..238600432,-p@chr2:238600416..238600432
-
Hg19::chr2:241906812..241906837,-p2@LOC200772
Hg19::chr2:241906841..241906868,-p1@LOC200772
Hg19::chr2:241906877..241906887,-p3@LOC200772
Hg19::chr2:29337060..29337092,+p3@CLIP4
Hg19::chr2:29337097..29337111,+p10@CLIP4
Hg19::chr2:29337114..29337117,+p21@CLIP4
Hg19::chr2:71047727..71047733,-p1@CLEC4F
Hg19::chr3:101597149..101597179,+p@chr3:101597149..101597179
+
Hg19::chr3:132036352..132036365,+p6@ACPP
Hg19::chr3:132036369..132036382,+p5@ACPP
Hg19::chr3:196417056..196417097,+p@chr3:196417056..196417097
+
Hg19::chr3:39321512..39321533,-p1@CX3CR1
Hg19::chr3:46968769..46968781,-p@chr3:46968769..46968781
-
Hg19::chr3:50658125..50658131,+p@chr3:50658125..50658131
+
Hg19::chr3:50658577..50658589,+p@chr3:50658577..50658589
+
Hg19::chr4:1582183..1582209,-p1@ENST00000466692
Hg19::chr4:2787568..2787572,+p@chr4:2787568..2787572
+
Hg19::chr4:2794535..2794549,-p@chr4:2794535..2794549
-
Hg19::chr4:3374958..3374970,+p@chr4:3374958..3374970
+
Hg19::chr4:76861392..76861418,-p3@NAAA
Hg19::chr4:76862117..76862186,-p1@NAAA
Hg19::chr5:114887365..114887382,+p@chr5:114887365..114887382
+
Hg19::chr5:14331744..14331753,+p@chr5:14331744..14331753
+
Hg19::chr5:14331797..14331811,+p@chr5:14331797..14331811
+
Hg19::chr5:169064317..169064332,+p2@DOCK2
Hg19::chr5:171601123..171601129,+p@chr5:171601123..171601129
+
Hg19::chr5:172232848..172232850,-p@chr5:172232848..172232850
-
Hg19::chr5:180237681..180237700,+p2@BC017750
Hg19::chr5:56112783..56112806,+p@chr5:56112783..56112806
+
Hg19::chr5:76145904..76145918,+p3@S100Z
Hg19::chr5:76145920..76145948,+p2@S100Z
Hg19::chr6:116782527..116782550,+p4@FAM26F
Hg19::chr6:144952186..144952227,+p@chr6:144952186..144952227
+
Hg19::chr6:144980477..144980514,+p4@UTRN
Hg19::chr6:144980558..144980569,+p30@UTRN
Hg19::chr6:144980756..144980774,+p22@UTRN
Hg19::chr6:144980777..144980799,+p13@UTRN
Hg19::chr6:144980861..144980870,+p38@UTRN
Hg19::chr6:144980916..144980928,+p23@UTRN
Hg19::chr6:144980954..144980988,+p11@UTRN
Hg19::chr6:144981000..144981016,+p14@UTRN
Hg19::chr6:31553978..31554060,+p1@LST1
Hg19::chr6:31554755..31554764,+p11@LST1
Hg19::chr6:31554766..31554777,+p8@LST1
Hg19::chr6:31554826..31554845,+p4@LST1
Hg19::chr6:31554962..31554987,+p5@LST1
Hg19::chr6:31554992..31555041,+p2@LST1
Hg19::chr6:31555045..31555057,+p9@LST1
Hg19::chr6:31582990..31583096,+p1@AIF1
Hg19::chr6:31584663..31584673,-p@chr6:31584663..31584673
-
Hg19::chr7:101923300..101923343,+p@chr7:101923300..101923343
+
Hg19::chr7:155055063..155055078,+p@chr7:155055063..155055078
+
Hg19::chr7:20581331..20581339,-p@chr7:20581331..20581339
-
Hg19::chr7:20581377..20581387,-p@chr7:20581377..20581387
-
Hg19::chr7:2673037..2673047,-p@chr7:2673037..2673047
-
Hg19::chr7:2673206..2673216,+p@chr7:2673206..2673216
+
Hg19::chr7:2673688..2673709,-p@chr7:2673688..2673709
-
Hg19::chr7:5596053..5596074,-p@chr7:5596053..5596074
-
Hg19::chr7:77429034..77429040,-p@chr7:77429034..77429040
-
Hg19::chr8:142384243..142384251,+p@chr8:142384243..142384251
+
Hg19::chr8:142384271..142384329,+p@chr8:142384271..142384329
+
Hg19::chr8:143833918..143833960,-p1@LYPD2
Hg19::chr8:143833961..143833974,-p2@LYPD2
Hg19::chr8:144480343..144480350,-p@chr8:144480343..144480350
-
Hg19::chr8:37439077..37439090,+p@chr8:37439077..37439090
+
Hg19::chr8:38758006..38758019,+p@chr8:38758006..38758019
+
Hg19::chr8:52811117..52811133,+p@chr8:52811117..52811133
+
Hg19::chr9:130540914..130540932,-p5@SH2D3C
Hg19::chr9:136709727..136709738,+p@chr9:136709727..136709738
+
Hg19::chr9:137267629..137267639,-p@chr9:137267629..137267639
-
Hg19::chr9:137267647..137267658,-p@chr9:137267647..137267658
-
Hg19::chr9:138967894..138967906,-p@chr9:138967894..138967906
-
Hg19::chr9:140348244..140348308,-p@chr9:140348244..140348308
-
Hg19::chrX:70712265..70712303,+p4@TAF1
Hg19::chrY:2870975..2870988,+p1@LINC00278


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

No GOStat results

Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

"{{{coexpression_dpi_cluster_scores_median}}}" is not a number.

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