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Notice: Undefined offset: 758 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 759 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 760 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 761 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 762 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 763 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 764 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 765 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 766 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 767 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 768 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 769 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 770 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 771 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 772 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 773 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 774 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 775 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 776 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 777 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 778 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 779 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 780 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 781 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 782 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 783 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 784 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 785 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 786 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 787 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 788 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 789 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 790 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 791 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 792 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 793 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 794 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 795 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 796 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 797 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 798 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 799 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 800 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 801 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 802 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 803 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 804 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 805 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 806 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 807 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 808 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 809 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 810 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 811 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 812 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 813 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 814 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 815 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 816 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 817 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 818 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 819 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 820 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 821 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 822 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 823 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 824 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 825 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 826 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 827 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 828 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 829 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 830 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 831 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 832 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 833 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 834 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 835 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 836 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 837 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 838 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 839 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 840 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 841 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 842 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 843 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 844 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 845 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 846 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 847 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 848 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 849 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 850 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 851 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 852 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 853 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 854 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 855 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 856 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 857 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 858 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 859 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 860 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 861 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 862 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 863 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 864 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 865 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 866 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 867 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 868 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 869 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 870 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 871 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 872 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 873 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 874 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 875 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 876 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 877 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 878 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 879 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 880 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 881 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 882 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 883 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 884 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 885 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 886 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 887 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Notice: Undefined offset: 888 in /var/www/html/resource_browser/extensions/array_recordprops.php on line 24

Warning: Cannot modify header information - headers already sent by (output started at /var/www/html/resource_browser/extensions/array_recordprops.php:24) in /var/www/html/resource_browser/includes/WebResponse.php on line 46

Warning: Cannot modify header information - headers already sent by (output started at /var/www/html/resource_browser/extensions/array_recordprops.php:24) in /var/www/html/resource_browser/includes/WebResponse.php on line 46

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Coexpression cluster:C94 - resource_browser
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Coexpression cluster:C94

From FANTOM5_SSTAR

Revision as of 04:09, 5 September 2012 by Autoedit (talk | contribs)
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Full id: C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma



Phase1 CAGE Peaks

  Short description
Hg19::chr10:126027036..126027041,- p@chr10:126027036..126027041
-
Hg19::chr10:5407022..5407032,+ p4@UCN3
Hg19::chr10:77056134..77056153,+ p1@ZNF503-AS1
Hg19::chr10:77056181..77056190,+ p2@ZNF503-AS1
Hg19::chr11:115158193..115158232,- p15@CADM1
Hg19::chr11:14992712..14992724,- p2@CALCA
Hg19::chr11:1643592..1643602,+ p@chr11:1643592..1643602
+
Hg19::chr11:4718911..4718938,- p2@OR51E2
Hg19::chr11:4718944..4718953,- p4@OR51E2
Hg19::chr11:4719014..4719028,- p3@OR51E2
Hg19::chr11:4719072..4719089,- p1@OR51E2
Hg19::chr11:60467048..60467063,+ p4@MS4A8B
Hg19::chr12:103353319..103353328,+ p@chr12:103353319..103353328
+
Hg19::chr12:127992016..127992052,+ p@chr12:127992016..127992052
+
Hg19::chr12:128077388..128077416,+ p@chr12:128077388..128077416
+
Hg19::chr12:15784419..15784458,- p18@EPS8
Hg19::chr12:22852866..22852887,+ p1@ENST00000536744
Hg19::chr12:23791058..23791099,+ p@chr12:23791058..23791099
+
Hg19::chr12:50284871..50284904,- p@chr12:50284871..50284904
-
Hg19::chr12:86268065..86268080,+ p1@NTS
Hg19::chr12:86272210..86272219,+ p@chr12:86272210..86272219
+
Hg19::chr12:86272273..86272280,+ +
p@chr12:86272273..86272280
Hg19::chr12:92401823..92401837,+ p@chr12:92401823..92401837
+
Hg19::chr12:92401866..92401875,+ p@chr12:92401866..92401875
+
Hg19::chr13:26619917..26619921,- p@chr13:26619917..26619921
-
Hg19::chr13:26626147..26626161,- p@chr13:26626147..26626161
-
Hg19::chr13:33498605..33498607,- p@chr13:33498605..33498607
-
Hg19::chr13:38508582..38508616,+ p2@CR627261
Hg19::chr13:93329950..93329974,- p@chr13:93329950..93329974
-
Hg19::chr13:93372213..93372253,- p1@GPC5-AS1
Hg19::chr13:93372254..93372268,- p2@GPC5-AS1
Hg19::chr13:93372269..93372274,- p3@GPC5-AS1
Hg19::chr13:93372283..93372290,- p4@GPC5-AS1
Hg19::chr13:93439916..93439921,- -
p@chr13:93439916..93439921
Hg19::chr13:93508642..93508652,- p@chr13:93508642..93508652
-
Hg19::chr14:105637918..105637925,- p@chr14:105637918..105637925
-
Hg19::chr14:105643341..105643359,- p@chr14:105643341..105643359
-
Hg19::chr14:76278486..76278493,+ +
p@chr14:76278486..76278493
Hg19::chr14:76447825..76447863,- p5@TGFB3
Hg19::chr15:51981498..51981513,+ +
p@chr15:51981498..51981513
Hg19::chr15:51984388..51984400,+ p6@SCG3
Hg19::chr15:59908653..59908680,+ p4@GCNT3
Hg19::chr15:74528745..74528750,+ p8@CCDC33
Hg19::chr15:74612015..74612053,- p@chr15:74612015..74612053
-
Hg19::chr16:1132642..1132649,- p@chr16:1132642..1132649
-
Hg19::chr16:1205163..1205193,+ p@chr16:1205163..1205193
+
Hg19::chr16:12121188..12121212,+ p@chr16:12121188..12121212
+
Hg19::chr16:15670786..15670791,- -
p@chr16:15670786..15670791
Hg19::chr16:15672837..15672851,+ p@chr16:15672837..15672851
+
Hg19::chr16:15699973..15700008,- p10@KIAA0430
Hg19::chr16:1631093..1631103,- p@chr16:1631093..1631103
-
Hg19::chr16:1968408..1968425,- p1@HS3ST6
Hg19::chr16:23313614..23313629,+ p2@SCNN1B
Hg19::chr16:23313645..23313671,+ p1@SCNN1B
Hg19::chr16:71378536..71378548,- p@chr16:71378536..71378548
-
Hg19::chr16:735116..735143,- p@chr16:735116..735143
-
Hg19::chr17:1666131..1666142,+ p@chr17:1666131..1666142
+
Hg19::chr18:56815532..56815544,+ p@chr18:56815532..56815544
+
Hg19::chr18:56816249..56816258,+ p@chr18:56816249..56816258
+
Hg19::chr18:56816267..56816276,+ p@chr18:56816267..56816276
+
Hg19::chr18:56816796..56816816,+ p@chr18:56816796..56816816
+
Hg19::chr18:56819783..56819803,+ +
p@chr18:56819783..56819803
Hg19::chr18:56822974..56823004,- p@chr18:56822974..56823004
-
Hg19::chr18:71843121..71843138,+ p@chr18:71843121..71843138
+
Hg19::chr18:71843159..71843180,+ p@chr18:71843159..71843180
+
Hg19::chr18:904938..904986,+ p2@ADCYAP1
Hg19::chr18:904994..905011,+ p5@ADCYAP1
Hg19::chr18:905092..905103,+ p12@ADCYAP1
Hg19::chr18:905104..905118,+ p10@ADCYAP1
Hg19::chr19:10823418..10823430,+ p15@DNM2
Hg19::chr19:10823451..10823463,+ p10@DNM2
Hg19::chr19:10823464..10823473,+ p16@DNM2
Hg19::chr19:3068219..3068225,- p@chr19:3068219..3068225
-
Hg19::chr19:42638173..42638181,+ p1@ENST00000531517
Hg19::chr19:51537964..51537973,- p6@KLK12
Hg19::chr19:51537982..51537991,- p8@KLK12
Hg19::chr19:51538017..51538048,- p3@KLK12
Hg19::chr19:51538096..51538109,- p5@KLK12
Hg19::chr19:51538121..51538134,- p4@KLK12
Hg19::chr1:147084502..147084507,+ p@chr1:147084502..147084507
+
Hg19::chr1:15416193..15416195,- p@chr1:15416193..15416195
-
Hg19::chr1:165198157..165198181,- p@chr1:165198157..165198181
-
Hg19::chr1:17906670..17906682,+ p17@ARHGEF10L
Hg19::chr1:18807428..18807451,+ p2@KLHDC7A
Hg19::chr1:188791401..188791408,- p@chr1:188791401..188791408
-
Hg19::chr1:209237425..209237437,- p@chr1:209237425..209237437
-
Hg19::chr1:222763113..222763144,- p3@TAF1A
Hg19::chr1:222763161..222763178,- p4@TAF1A
Hg19::chr1:223853355..223853378,- p2@CAPN8
Hg19::chr1:223853388..223853408,- p1@CAPN8
Hg19::chr1:223853431..223853436,- p4@CAPN8
Hg19::chr1:226067570..226067582,- p@chr1:226067570..226067582
-
Hg19::chr1:27240361..27240377,- p2@NR0B2
Hg19::chr1:39749767..39749791,+ p17@MACF1
Hg19::chr1:52442908..52442917,- p9@RAB3B
Hg19::chr1:55446384..55446413,+ p3@TMEM61
Hg19::chr20:10996541..10996543,+ p@chr20:10996541..10996543
+
Hg19::chr20:17207711..17207722,+ p3@PCSK2
Hg19::chr20:2310990..2310996,+ p@chr20:2310990..2310996
+
Hg19::chr20:2311002..2311015,+ p@chr20:2311002..2311015
+
Hg19::chr20:3184528..3184549,- p@chr20:3184528..3184549
-
Hg19::chr20:3184707..3184740,+ p@chr20:3184707..3184740
+
Hg19::chr20:31958369..31958376,- p@chr20:31958369..31958376
-
Hg19::chr20:31958409..31958418,- p@chr20:31958409..31958418
-
Hg19::chr20:33114038..33114096,+ p2@DYNLRB1
Hg19::chr20:3780693..3780714,+ p17@CDC25B
Hg19::chr20:49241036..49241049,- p@chr20:49241036..49241049
-
Hg19::chr20:5896962..5896986,+ p@chr20:5896962..5896986
+
Hg19::chr22:24251729..24251732,- p@chr22:24251729..24251732
-
Hg19::chr22:25297679..25297722,+ p@chr22:25297679..25297722
+
Hg19::chr2:135011636..135011649,+ p8@MGAT5
Hg19::chr2:163942394..163942398,+ p@chr2:163942394..163942398
+
Hg19::chr2:170367210..170367234,+ p6@KBTBD10
Hg19::chr2:191221240..191221253,+ p17@INPP1
Hg19::chr2:214788522..214788538,+ p2@SPAG16
Hg19::chr2:236414196..236414199,+ p1@AGAP1-IT1
Hg19::chr2:2617159..2617172,- p@chr2:2617159..2617172
-
Hg19::chr2:99758223..99758246,+ p3@C2orf15
p6@MRPL30
Hg19::chr3:129813701..129813712,+ p@chr3:129813701..129813712
+
Hg19::chr3:13369325..13369334,- p6@NUP210
Hg19::chr3:148994474..148994479,- p1@CPHL1P
Hg19::chr3:176474114..176474132,- p@chr3:176474114..176474132
-
Hg19::chr3:186713943..186713982,+ p35@ST6GAL1
Hg19::chr3:20038294..20038297,+ p1@ENST00000364675
Hg19::chr3:55328211..55328214,+ p@chr3:55328211..55328214
+
Hg19::chr3:55361260..55361286,- -
p@chr3:55361260..55361286
Hg19::chr4:10736435..10736454,- -
p@chr4:10736435..10736454
Hg19::chr4:10736455..10736475,- p@chr4:10736455..10736475
-
Hg19::chr4:10736487..10736498,- p@chr4:10736487..10736498
-
Hg19::chr4:114880636..114880650,+ p@chr4:114880636..114880650
+
Hg19::chr4:116034768..116034781,- p2@NDST4
Hg19::chr4:144354723..144354734,+ p@chr4:144354723..144354734
+
Hg19::chr4:156364770..156364801,+ p@chr4:156364770..156364801
+
Hg19::chr5:102143765..102143784,+ p22@PAM
Hg19::chr5:102143805..102143822,+ p13@PAM
Hg19::chr5:102143830..102143844,+ p18@PAM
Hg19::chr5:102143863..102143874,+ p23@PAM
Hg19::chr5:125800836..125800850,+ p21@GRAMD3
Hg19::chr5:138429594..138429616,- p7@SIL1
Hg19::chr5:15902227..15902252,- p@chr5:15902227..15902252
-
Hg19::chr5:40415240..40415245,+ p@chr5:40415240..40415245
+
Hg19::chr5:54157..54174,+ p@chr5:54157..54174
+
Hg19::chr6:132980317..132980326,- p@chr6:132980317..132980326
-
Hg19::chr6:132980338..132980346,- p@chr6:132980338..132980346
-
Hg19::chr6:24980950..24980956,+ p@chr6:24980950..24980956
+
Hg19::chr6:32134832..32134862,+ p11@EGFL8
Hg19::chr6:41168871..41168911,- p1@TREML2
Hg19::chr6:41168920..41168927,- p4@TREML2
Hg19::chr6:48219854..48219891,- p@chr6:48219854..48219891
-
Hg19::chr6:49695621..49695625,- p@chr6:49695621..49695625
-
Hg19::chr6:49696401..49696408,- -
p@chr6:49696401..49696408
Hg19::chr6:49701451..49701462,- p@chr6:49701451..49701462
-
Hg19::chr6:49712072..49712087,- p2@CRISP3
Hg19::chr7:100816687..100816697,- p4@NAT16
Hg19::chr7:130600779..130600797,+ p@chr7:130600779..130600797
+
Hg19::chr7:130600802..130600814,+ p@chr7:130600802..130600814
+
Hg19::chr7:150499243..150499249,- p@chr7:150499243..150499249
-
Hg19::chr7:150499392..150499424,- p@chr7:150499392..150499424
-
Hg19::chr7:150499428..150499436,- p@chr7:150499428..150499436
-
Hg19::chr7:150499437..150499449,- p@chr7:150499437..150499449
-
Hg19::chr7:150500070..150500081,+ p27@TMEM176A
Hg19::chr7:150500286..150500288,- p@chr7:150500286..150500288
-
Hg19::chr7:150500382..150500396,+ p9@TMEM176A
Hg19::chr7:150500441..150500448,+ p34@TMEM176A
Hg19::chr7:150675342..150675363,- p4@KCNH2
Hg19::chr7:150675372..150675417,- p1@KCNH2
Hg19::chr7:21985656..21985667,- p3@CDCA7L
Hg19::chr7:26415673..26415697,- p@chr7:26415673..26415697
-
Hg19::chr7:26578438..26578451,- p2@KIAA0087
Hg19::chr7:26578466..26578485,- p1@KIAA0087
Hg19::chr7:27191798..27191816,- p@chr7:27191798..27191816
-
Hg19::chr7:29971838..29971870,- p@chr7:29971838..29971870
-
Hg19::chr7:36327304..36327316,+ p11@EEPD1
Hg19::chr7:36327318..36327333,+ p14@EEPD1
Hg19::chr7:872107..872145,+ p2@SUN1
Hg19::chr7:92300854..92300857,- p@chr7:92300854..92300857
-
Hg19::chr7:92300908..92300913,- p@chr7:92300908..92300913
-
Hg19::chr7:99541928..99541935,- p@chr7:99541928..99541935
-
Hg19::chr8:10122760..10122784,+ p@chr8:10122760..10122784
+
Hg19::chr8:104148509..104148517,+ p@chr8:104148509..104148517
+
Hg19::chr8:125183765..125183776,- p1@ENST00000520031
p1@uc003yqy.1
Hg19::chr8:139856402..139856426,- p@chr8:139856402..139856426
-
Hg19::chr8:141018634..141018657,- p6@TRAPPC9
Hg19::chr8:141018664..141018674,- p15@TRAPPC9
Hg19::chr8:2104622..2104638,+ p2@ENST00000518316
Hg19::chr8:29592736..29592744,- p3@C8orf75
Hg19::chr9:130738884..130738902,- -
p@chr9:130738884..130738902
Hg19::chr9:130738905..130738929,- p@chr9:130738905..130738929
-
Hg19::chr9:133816046..133816048,- p@chr9:133816046..133816048
-
Hg19::chr9:133816054..133816060,- p@chr9:133816054..133816060
-
Hg19::chr9:133816065..133816079,- p@chr9:133816065..133816079
-
Hg19::chr9:133816081..133816105,- -
p@chr9:133816081..133816105
Hg19::chr9:136467523..136467541,- p@chr9:136467523..136467541
-
Hg19::chr9:136499577..136499584,+ p@chr9:136499577..136499584
+
Hg19::chr9:136753424..136753441,- p@chr9:136753424..136753441
-
Hg19::chr9:139940990..139941047,- p4@NPDC1
Hg19::chrX:103810874..103810885,+ p1@IL1RAPL2
Hg19::chrX:104100378..104100381,+ p@chrX:104100378..104100381
+


Enriched pathways on this co-expression clusterSummary:
Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.
Analyst: Emmanuel Dimont

link to source dataset
data


No results for this coexpression

Enriched Gene Ontology terms on this co-expression clusterSummary: Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter.
Analyst: Erik Arner

link to source dataset
data


GO IDGO nameFDR corrected p-value
GO:0005737cytoplasm0.00283719973544866
GO:0030141secretory granule0.00283719973544866
GO:0007189G-protein signaling, adenylate cyclase activating pathway0.00283719973544866
GO:0044444cytoplasmic part0.00921918044552319
GO:0000139Golgi membrane0.00921918044552319
GO:0000267cell fraction0.00921918044552319
GO:0005179hormone activity0.00921918044552319
GO:0007188G-protein signaling, coupled to cAMP nucleotide second messenger0.00921918044552319
GO:0044431Golgi apparatus part0.00921918044552319
GO:0019933cAMP-mediated signaling0.00921918044552319
GO:0031410cytoplasmic vesicle0.00921918044552319
GO:0031982vesicle0.00921918044552319
GO:0005625soluble fraction0.00921918044552319
GO:0005794Golgi apparatus0.00921918044552319
GO:0007190adenylate cyclase activation0.0145487135589096
GO:0045087innate immune response0.0145487135589096
GO:0007187G-protein signaling, coupled to cyclic nucleotide second messenger0.0145487135589096
GO:0019935cyclic-nucleotide-mediated signaling0.0145487135589096
GO:0051349positive regulation of lyase activity0.0145487135589096
GO:0045762positive regulation of adenylate cyclase activity0.0145487135589096
GO:0031281positive regulation of cyclase activity0.0145487135589096
GO:0005184neuropeptide hormone activity0.0194955752777347
GO:0022402cell cycle process0.0194955752777347
GO:0008015blood circulation0.0194955752777347
GO:0003013circulatory system process0.0194955752777347
GO:0006936muscle contraction0.0194955752777347
GO:0003012muscle system process0.0194955752777347
GO:0045761regulation of adenylate cyclase activity0.0194955752777347
GO:0042581specific granule0.0194955752777347
GO:0004441inositol-1,4-bisphosphate 1-phosphatase activity0.0194955752777347
GO:0048702embryonic neurocranium morphogenesis0.0194955752777347
GO:0004598peptidylamidoglycolate lyase activity0.0194955752777347
GO:0031716calcitonin receptor binding0.0194955752777347
GO:0004286proprotein convertase 2 activity0.0194955752777347
GO:0001984vasodilation of artery during baroreceptor response to increased systemic arterial blood pressure0.0194955752777347
GO:0042271susceptibility to natural killer cell mediated cytotoxicity0.0194955752777347
GO:0035150regulation of tube size0.0194955752777347
GO:0050880regulation of blood vessel size0.0194955752777347
GO:0051339regulation of lyase activity0.0194955752777347
GO:0031279regulation of cyclase activity0.0194955752777347
GO:0008016regulation of heart contraction0.0194955752777347
GO:0003018vascular process in circulatory system0.0195443769341191
GO:0006486protein amino acid glycosylation0.0195443769341191
GO:0043413biopolymer glycosylation0.0200595991583854
GO:0008375acetylglucosaminyltransferase activity0.0200900194078242
GO:0007154cell communication0.0200900194078242
GO:0009101glycoprotein biosynthetic process0.0200900194078242
GO:0003015heart process0.0200900194078242
GO:0060047heart contraction0.0200900194078242
GO:0012505endomembrane system0.0200900194078242
GO:0005102receptor binding0.0205864393041321
GO:0008146sulfotransferase activity0.0234886471417827
GO:0007165signal transduction0.0248165823120294
GO:0009100glycoprotein metabolic process0.0248165823120294
GO:0051649establishment of cellular localization0.0248165823120294
GO:0043229intracellular organelle0.0248165823120294
GO:0043226organelle0.0248165823120294
GO:0006948induction by virus of cell-cell fusion in host0.0248165823120294
GO:0004910interleukin-1, Type II, blocking receptor activity0.0248165823120294
GO:0001983baroreceptor response to increased systemic arterial blood pressure0.0248165823120294
GO:0019968interleukin-1, Type II, blocking binding0.0248165823120294
GO:0016312inositol bisphosphate phosphatase activity0.0248165823120294
GO:0030144alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase activity0.0248165823120294
GO:0051641cellular localization0.0248165823120294
GO:0048523negative regulation of cellular process0.025477497950714
GO:0031420alkali metal ion binding0.025477497950714
GO:0016782transferase activity, transferring sulfur-containing groups0.0256829987908073
GO:0045786negative regulation of progression through cell cycle0.0256829987908073
GO:0048519negative regulation of biological process0.0292832235172398
GO:0065002intracellular protein transport across a membrane0.0301046166136714
GO:0007049cell cycle0.0301046166136714
GO:0035313wound healing, spreading of epidermal cells0.0301046166136714
GO:0004504peptidylglycine monooxygenase activity0.0301046166136714
GO:0003829beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity0.0301046166136714
GO:0016808proprotein convertase activity0.0301046166136714
GO:0050961detection of temperature stimulus during sensory perception0.0301046166136714
GO:0050965detection of temperature stimulus during sensory perception of pain0.0301046166136714
GO:0045932negative regulation of muscle contraction0.0301046166136714
GO:0045986negative regulation of smooth muscle contraction0.0301046166136714
GO:0043085positive regulation of catalytic activity0.0309776874453533
GO:0043065positive regulation of apoptosis0.0309776874453533
GO:0043068positive regulation of programmed cell death0.031272145987102
GO:0051606detection of stimulus0.0320111792065642
GO:0019932second-messenger-mediated signaling0.0320111792065642
GO:0035239tube morphogenesis0.0320111792065642
GO:0002028regulation of sodium ion transport0.0320111792065642
GO:0043195terminal button0.0320111792065642
GO:0033267axon part0.0320111792065642
GO:0016048detection of temperature stimulus0.0320111792065642
GO:0050951sensory perception of temperature stimulus0.0320111792065642
GO:0048701embryonic cranial skeleton morphogenesis0.0320111792065642
GO:0003835beta-galactoside alpha-2,6-sialyltransferase activity0.0320111792065642
GO:0007184SMAD protein nuclear translocation0.0320111792065642
GO:0008109N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity0.0320111792065642
GO:0003701RNA polymerase I transcription factor activity0.0320111792065642
GO:0001978carotid sinus baroreceptor feedback regulation of systemic arterial blood pressure0.0320111792065642
GO:0003025baroreceptor regulation of systemic arterial blood pressure0.0320111792065642
GO:0031403lithium ion binding0.0320111792065642
GO:0015016[heparan sulfate]-glucosamine N-sulfotransferase activity0.0320111792065642
GO:0016021integral to membrane0.0327749287978127
GO:0045184establishment of protein localization0.0342165106167176
GO:0031224intrinsic to membrane0.0342165106167176
GO:0044464cell part0.0347920793349787
GO:0006952defense response0.035617442548693
GO:0008467heparin-glucosamine 3-O-sulfotransferase activity0.0369999458837642
GO:0048265response to pain0.0369999458837642
GO:0003085negative regulation of systemic arterial blood pressure0.0369999458837642
GO:0008104protein localization0.038105327651986
GO:0042995cell projection0.0401647866387421
GO:0030512negative regulation of transforming growth factor beta receptor signaling pathway0.0412863325297617
GO:0002027regulation of heart rate0.0412863325297617
GO:0001912positive regulation of leukocyte mediated cytotoxicity0.0412863325297617
GO:0051482elevation of cytosolic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)0.0412863325297617
GO:0045954positive regulation of natural killer cell mediated cytotoxicity0.0412863325297617
GO:0045778positive regulation of ossification0.0412863325297617
GO:0005856cytoskeleton0.0418085846115234
GO:0050794regulation of cellular process0.0424296841742674
GO:0007267cell-cell signaling0.042790728048361
GO:0033036macromolecule localization0.042790728048361
GO:0051049regulation of transport0.04398091260169
GO:0042269regulation of natural killer cell mediated cytotoxicity0.0446444351479221
GO:0031645negative regulation of neurological process0.0446444351479221
GO:0005868cytoplasmic dynein complex0.0446444351479221
GO:0046852positive regulation of bone remodeling0.0446444351479221
GO:0016023cytoplasmic membrane-bound vesicle0.046404432021233
GO:0035295tube development0.0471555423947684
GO:0031988membrane-bound vesicle0.0473811370175228
GO:0000074regulation of progression through cell cycle0.0473811370175228
GO:0048518positive regulation of biological process0.0473811370175228
GO:0045776negative regulation of blood pressure0.0473811370175228
GO:0004908interleukin-1 receptor activity0.0473811370175228
GO:0030279negative regulation of ossification0.0473811370175228
GO:0001976regulation of systemic arterial blood pressure by neurological process0.0473811370175228
GO:0051726regulation of cell cycle0.0473811370175228
GO:0005515protein binding0.0473811370175228
GO:0031090organelle membrane0.048147535383269
GO:0044425membrane part0.0491408776240159



Enriched sample ontology terms on this co-expression clusterSummary:To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. Analyst: Hideya Kawaji

links to source dataset


uberon_data
disease_data


Uber Anatomy
Ontology termp-valuen
adult organism1.00e-41115
neural tube8.74e-2357
neural rod8.74e-2357
future spinal cord8.74e-2357
neural keel8.74e-2357
central nervous system2.08e-2282
regional part of nervous system1.42e-2194
nervous system1.42e-2194
regional part of brain9.23e-1959
brain2.09e-1869
future brain2.09e-1869
neurectoderm7.92e-1890
anterior neural tube1.13e-1742
neural plate1.69e-1786
presumptive neural plate1.69e-1786
regional part of forebrain2.25e-1741
forebrain2.25e-1741
future forebrain2.25e-1741
ectoderm8.38e-15173
presumptive ectoderm8.38e-15173
ectoderm-derived structure2.27e-14169
gray matter3.45e-1434
brain grey matter3.45e-1434
telencephalon6.45e-1434
regional part of telencephalon1.72e-1333
cerebral hemisphere2.17e-1332
pre-chordal neural plate1.71e-1261
anterior region of body1.95e-12129
craniocervical region1.95e-12129
head1.72e-11123
regional part of cerebral cortex4.67e-1122
cerebral cortex1.01e-1025
pallium1.01e-1025
neocortex2.54e-1020
organ part7.90e-09219
subdivision of digestive tract8.14e-09129
endodermal part of digestive tract8.14e-09129
multi-tissue structure7.14e-08347
gastrointestinal system1.70e-0735
digestive system3.99e-07155
digestive tract3.99e-07155
primitive gut3.99e-07155
Disease
Ontology termp-valuen
carcinoma4.00e-13106
cell type cancer1.18e-12143
cancer3.97e-07235
disease of cellular proliferation6.90e-07239
adenocarcinoma8.09e-0725


Overrepresented TFBS (DNA) motifs on this co-expression clusterSummary:The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. Analyst: Michiel de Hoon

link to source data
Novel motifs
data

Jaspar motifs
data


Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysisSummary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained.
Analyst: Erik Arner

link to source dataset

data


(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)

TF#promotersEnrichmentp-valueq-value
FOXA1#3169291.623036225920090.006579245404170410.0281126671616952
SUZ12#23512102.531100046013280.006852546776686150.0290416399306223



Relative expression of the co-expression clusterSummary:Co-expression clusters are compared against FANTOM5 samples to obtain relative expression.
Analyst:NA

link to data source
data


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