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{{DOID
 
{{DOID
|id=DOID:178
+
|alt_id=DOID:45
|name=vascular disease
 
|namespace=disease_ontology
 
|def=
 
|xref=MSH:D014652;;NCI:C35117;;SNOMEDCT_2010_1_31:27550009;;UMLS_CUI:C0042373
 
|is_a=DOID:1287
 
|synonym="internal elastic lamina" EXACT []
 
 
|comment=
 
|comment=
|alt_id=DOID:45
 
|disjoint_from=
 
|union_of=
 
 
|created_by=
 
|created_by=
|obo_creation_date=
+
|def=
|subset=
 
 
|derives_from=
 
|derives_from=
 
|develops_from=
 
|develops_from=
 +
|disjoint_from=
 
|has_quality=
 
|has_quality=
 +
|id=DOID:178
 +
|is_a=DOID:1287
 +
|is_obsolete=
 
|located_in=
 
|located_in=
 +
|name=vascular disease
 +
|namespace=FANTOM
 +
|obo_creation_date=
 
|part_of=
 
|part_of=
 +
|preceded_by=
 
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
 
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
+
|subset=
|preceded_by=
+
|synonym="internal elastic lamina" EXACT []
 +
|union_of=
 +
|xref=MSH:D014652;;NCI:C35117;;SNOMEDCT_2010_1_31:27550009;;UMLS_CUI:C0042373
 
}}
 
}}

Latest revision as of 07:49, 12 September 2014

Name:vascular disease
Namespace:FANTOM
Xrefs:
links:

MSH:D014652
NCI:C35117
SNOMEDCT_2010_1_31:27550009

UMLS_CUI:C0042373
Synonyms: "internal elastic lamina" EXACT []
Alt_id: DOID:45

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:1287(cardiovascular system disease)



Children


is a:DOID:0050828 (artery disease),DOID:326 (ischemia)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

  • 10050-101G5 (heart, adult, diseased post-infarction, donor1)

Mouse (Mus musculus)

  • 10050-101G5 (heart, adult, diseased post-infarction, donor1)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:178 (vascular disease), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr4:74508559..74508597,+#_22621425bcd48d3f43703e93031c690ap@chr4:74508559..74508597, +
5.42e-195FFCP PHASE1:Hg19::chr20:36776599..36776606,-#_22621425bcd48d3f43703e93031c690ap@chr20:36776599..36776606, -
5.42e-195FFCP PHASE2:Hg19::chr4:74508559..74508597,+#_22621425bcd48d3f43703e93031c690ap@chr4:74508559..74508597, +
5.42e-195FFCP PHASE2:Hg19::chr20:36776599..36776606,-#_22621425bcd48d3f43703e93031c690ap@chr20:36776599..36776606, -
2.55e-98FFCP PHASE1:Hg19::chr16:847096..847103,-#_20d665a658caf100af811b8f46a11709p@chr16:847096..847103, -
2.55e-98FFCP PHASE2:Hg19::chr16:847096..847103,-#_20d665a658caf100af811b8f46a11709p@chr16:847096..847103, -
1.23e-66FFCP PHASE1:Hg19::chr11:118829078..118829088,+#_bda155a12579134d5db53928c5845341p10@UPK2
1.23e-66FFCP PHASE2:Hg19::chr11:118829078..118829088,+#_bda155a12579134d5db53928c5845341p10@UPK2
2.39e-66FFCP PHASE2:Hg19::chr15:71446812..71446820,+#_5c84f1c6b9b216a0ca0fe6903210eea7p@chr15:71446812..71446820, +
2.39e-66FFCP PHASE1:Hg19::chr10:43871125..43871134,+#_5c84f1c6b9b216a0ca0fe6903210eea7p@chr10:43871125..43871134, +
2.39e-66FFCP PHASE1:Hg19::chr15:71446812..71446820,+#_5c84f1c6b9b216a0ca0fe6903210eea7p@chr15:71446812..71446820, +
2.39e-66FFCP PHASE1:Hg19::chr2:40656537..40656548,-#_5c84f1c6b9b216a0ca0fe6903210eea7p30@SLC8A1
2.39e-66FFCP PHASE2:Hg19::chr1:12030696..12030711,+#_5c84f1c6b9b216a0ca0fe6903210eea7p@chr1:12030696..12030711, +
2.39e-66FFCP PHASE2:Hg19::chr10:43871125..43871134,+#_5c84f1c6b9b216a0ca0fe6903210eea7p@chr10:43871125..43871134, +
2.39e-66FFCP PHASE1:Hg19::chr1:12030696..12030711,+#_5c84f1c6b9b216a0ca0fe6903210eea7p@chr1:12030696..12030711, +
2.39e-66FFCP PHASE2:Hg19::chr2:40656537..40656548,-#_5c84f1c6b9b216a0ca0fe6903210eea7p30@SLC8A1
4.66e-66FFCP PHASE2:Hg19::chr14:23863078..23863082,+#_ef9008150bc7f956744048817dd61e7fp@chr14:23863078..23863082, +
4.66e-66FFCP PHASE1:Hg19::chr14:23863078..23863082,+#_ef9008150bc7f956744048817dd61e7fp@chr14:23863078..23863082, +
4.66e-66FFCP PHASE2:Hg19::chr1:202431836..202431849,+#_ef9008150bc7f956744048817dd61e7fp18@PPP1R12B
4.66e-66FFCP PHASE1:Hg19::chr1:202431911..202431922,+#_ef9008150bc7f956744048817dd61e7fp12@PPP1R12B
4.66e-66FFCP PHASE1:Hg19::chr1:202431836..202431849,+#_ef9008150bc7f956744048817dd61e7fp18@PPP1R12B
4.66e-66FFCP PHASE2:Hg19::chr14:23863067..23863074,+#_ef9008150bc7f956744048817dd61e7fp@chr14:23863067..23863074, +
4.66e-66FFCP PHASE2:Hg19::chr1:202431911..202431922,+#_ef9008150bc7f956744048817dd61e7fp12@PPP1R12B
4.66e-66FFCP PHASE1:Hg19::chr14:23863067..23863074,+#_ef9008150bc7f956744048817dd61e7fp@chr14:23863067..23863074, +
1.46e-50FFCP PHASE2:Hg19::chr1:16340619..16340636,+#_033f32412c13e0853d92515969774164p@chr1:16340619..16340636, +
1.46e-50FFCP PHASE1:Hg19::chr1:16340619..16340636,+#_033f32412c13e0853d92515969774164p@chr1:16340619..16340636, +
1.46e-50FFCP PHASE2:Hg19::chr19:50216889..50216897,-#_033f32412c13e0853d92515969774164p@chr19:50216889..50216897, -
1.46e-50FFCP PHASE1:Hg19::chr19:50216889..50216897,-#_033f32412c13e0853d92515969774164p@chr19:50216889..50216897, -
2.42e-50FFCP PHASE1:Hg19::chr16:46791398..46791405,-#_5cf554a9c4bba825ba0d555dc2f6523ep@chr16:46791398..46791405, -
2.42e-50FFCP PHASE2:Hg19::chr15:44172060..44172067,-#_5cf554a9c4bba825ba0d555dc2f6523ep@chr15:44172060..44172067, -
2.42e-50FFCP PHASE2:Hg19::chr16:46791398..46791405,-#_5cf554a9c4bba825ba0d555dc2f6523ep@chr16:46791398..46791405, -
2.42e-50FFCP PHASE1:Hg19::chr4:169995417..169995430,-#_5cf554a9c4bba825ba0d555dc2f6523ep@chr4:169995417..169995430, -
2.42e-50FFCP PHASE1:Hg19::chr7:44733756..44733765,+#_5cf554a9c4bba825ba0d555dc2f6523ep@chr7:44733756..44733765, +
2.42e-50FFCP PHASE2:Hg19::chr11:118829041..118829050,+#_5cf554a9c4bba825ba0d555dc2f6523ep9@UPK2
2.42e-50FFCP PHASE1:Hg19::chr15:44172060..44172067,-#_5cf554a9c4bba825ba0d555dc2f6523ep@chr15:44172060..44172067, -
2.42e-50FFCP PHASE2:Hg19::chr4:169995417..169995430,-#_5cf554a9c4bba825ba0d555dc2f6523ep@chr4:169995417..169995430, -
2.42e-50FFCP PHASE1:Hg19::chr11:118829041..118829050,+#_5cf554a9c4bba825ba0d555dc2f6523ep9@UPK2
2.42e-50FFCP PHASE2:Hg19::chr7:44733756..44733765,+#_5cf554a9c4bba825ba0d555dc2f6523ep@chr7:44733756..44733765, +
3.99e-50FFCP PHASE1:Hg19::chr8:66701339..66701344,-#_981b891a03baf149df85b0168191e66fp29@PDE7A
3.99e-50FFCP PHASE1:Hg19::chr1:202431859..202431868,+#_981b891a03baf149df85b0168191e66fp20@PPP1R12B
3.99e-50FFCP PHASE1:Hg19::chr7:100454665..100454679,+#_981b891a03baf149df85b0168191e66fp11@SLC12A9
3.99e-50FFCP PHASE1:Hg19::chr20:35973066..35973071,+#_981b891a03baf149df85b0168191e66fp25@SRC
3.99e-50FFCP PHASE1:Hg19::chr6:36812270..36812277,-#_981b891a03baf149df85b0168191e66fp@chr6:36812270..36812277, -
3.99e-50FFCP PHASE2:Hg19::chr6:36812270..36812277,-#_981b891a03baf149df85b0168191e66fp@chr6:36812270..36812277, -
3.99e-50FFCP PHASE2:Hg19::chr1:202431859..202431868,+#_981b891a03baf149df85b0168191e66fp20@PPP1R12B
3.99e-50FFCP PHASE2:Hg19::chr14:23862916..23862925,-#_981b891a03baf149df85b0168191e66fp@chr14:23862916..23862925, -
3.99e-50FFCP PHASE2:Hg19::chr20:35973066..35973071,+#_981b891a03baf149df85b0168191e66fp25@SRC
3.99e-50FFCP PHASE2:Hg19::chr7:100454665..100454679,+#_981b891a03baf149df85b0168191e66fp11@SLC12A9
3.99e-50FFCP PHASE1:Hg19::chr14:23862916..23862925,-#_981b891a03baf149df85b0168191e66fp@chr14:23862916..23862925, -
3.99e-50FFCP PHASE2:Hg19::chr8:66701339..66701344,-#_981b891a03baf149df85b0168191e66fp29@PDE7A
3.99e-50FFCP PHASE2:Hg19::chr14:23862685..23862696,+#_981b891a03baf149df85b0168191e66fp@chr14:23862685..23862696, +
3.99e-50FFCP PHASE2:Hg19::chr2:220495902..220495903,+#_981b891a03baf149df85b0168191e66fp25@SLC4A3
3.99e-50FFCP PHASE1:Hg19::chr2:220495902..220495903,+#_981b891a03baf149df85b0168191e66fp25@SLC4A3
3.99e-50FFCP PHASE1:Hg19::chr14:23862685..23862696,+#_981b891a03baf149df85b0168191e66fp@chr14:23862685..23862696, +
6.58e-50FFCP PHASE1:Hg19::chr14:23876391..23876406,-#_61bd103f837d182049be540592d3fc52p4@MYH6
6.58e-50FFCP PHASE1:Hg19::chr14:23863407..23863418,-#_61bd103f837d182049be540592d3fc52p@chr14:23863407..23863418, -
6.58e-50FFCP PHASE1:Hg19::chr14:23862577..23862585,-#_61bd103f837d182049be540592d3fc52p5@MYH6
6.58e-50FFCP PHASE2:Hg19::chr14:23862659..23862665,-#_61bd103f837d182049be540592d3fc52-, p@chr14:23862659..23862665
6.58e-50FFCP PHASE1:Hg19::chr14:23862659..23862665,-#_61bd103f837d182049be540592d3fc52p@chr14:23862659..23862665, -
6.58e-50FFCP PHASE2:Hg19::chr14:23876391..23876406,-#_61bd103f837d182049be540592d3fc52p4@MYH6
6.58e-50FFCP PHASE2:Hg19::chr14:23863407..23863418,-#_61bd103f837d182049be540592d3fc52p@chr14:23863407..23863418, -
6.58e-50FFCP PHASE2:Hg19::chr14:23862577..23862585,-#_61bd103f837d182049be540592d3fc52p5@MYH6
9.91e-41FFCP PHASE2:Hg19::chr14:23865605..23865611,-#_4faa9f62a210dd32a8d44d5c4ff2e5adp@chr14:23865605..23865611, -
9.91e-41FFCP PHASE1:Hg19::chr21:19117606..19117619,+#_4faa9f62a210dd32a8d44d5c4ff2e5adp@chr21:19117606..19117619, +
9.91e-41FFCP PHASE1:Hg19::chr14:23865605..23865611,-#_4faa9f62a210dd32a8d44d5c4ff2e5adp@chr14:23865605..23865611, -
9.91e-41FFCP PHASE2:Hg19::chr11:2676900..2676903,-#_4faa9f62a210dd32a8d44d5c4ff2e5adp@chr11:2676900..2676903, -
9.91e-41FFCP PHASE2:Hg19::chr21:19117606..19117619,+#_4faa9f62a210dd32a8d44d5c4ff2e5adp@chr21:19117606..19117619, +
9.91e-41FFCP PHASE2:Hg19::chr1:6063096..6063104,+#_4faa9f62a210dd32a8d44d5c4ff2e5adp@chr1:6063096..6063104, +
9.91e-41FFCP PHASE1:Hg19::chr1:6063096..6063104,+#_4faa9f62a210dd32a8d44d5c4ff2e5adp@chr1:6063096..6063104, +
9.91e-41FFCP PHASE1:Hg19::chr11:2676900..2676903,-#_4faa9f62a210dd32a8d44d5c4ff2e5adp@chr11:2676900..2676903, -
1.48e-40FFCP PHASE2:Hg19::chr14:23865587..23865596,-#_9c00f43d315f1bc6317882ed859d5688p@chr14:23865587..23865596, -
1.48e-40FFCP PHASE1:Hg19::chr1:202432165..202432174,+#_9c00f43d315f1bc6317882ed859d5688p30@PPP1R12B
1.48e-40FFCP PHASE1:Hg19::chr14:23865587..23865596,-#_9c00f43d315f1bc6317882ed859d5688p@chr14:23865587..23865596, -
1.48e-40FFCP PHASE2:Hg19::chr2:24585157..24585182,-#_9c00f43d315f1bc6317882ed859d5688p@chr2:24585157..24585182, -
1.48e-40FFCP PHASE1:Hg19::chr16:46791436..46791443,-#_9c00f43d315f1bc6317882ed859d5688p@chr16:46791436..46791443, -
1.48e-40FFCP PHASE2:Hg19::chr14:23863529..23863540,-#_9c00f43d315f1bc6317882ed859d5688-, p@chr14:23863529..23863540
1.48e-40FFCP PHASE2:Hg19::chr14:23862653..23862669,+#_9c00f43d315f1bc6317882ed859d5688p@chr14:23862653..23862669, +
1.48e-40FFCP PHASE1:Hg19::chr2:106054837..106054867,+#_9c00f43d315f1bc6317882ed859d5688p@chr2:106054837..106054867, +
1.48e-40FFCP PHASE2:Hg19::chr2:106054837..106054867,+#_9c00f43d315f1bc6317882ed859d5688p@chr2:106054837..106054867, +
1.48e-40FFCP PHASE1:Hg19::chr14:23863529..23863540,-#_9c00f43d315f1bc6317882ed859d5688p@chr14:23863529..23863540, -
1.48e-40FFCP PHASE2:Hg19::chr16:46791436..46791443,-#_9c00f43d315f1bc6317882ed859d5688p@chr16:46791436..46791443, -
1.48e-40FFCP PHASE2:Hg19::chr1:202432165..202432174,+#_9c00f43d315f1bc6317882ed859d5688p30@PPP1R12B
1.48e-40FFCP PHASE1:Hg19::chr14:23862653..23862669,+#_9c00f43d315f1bc6317882ed859d5688p@chr14:23862653..23862669, +
1.48e-40FFCP PHASE2:Hg19::chr14:23862929..23862940,-#_9c00f43d315f1bc6317882ed859d5688p@chr14:23862929..23862940, -
1.48e-40FFCP PHASE1:Hg19::chr12:825768..825781,-#_9c00f43d315f1bc6317882ed859d5688p@chr12:825768..825781, -
1.48e-40FFCP PHASE1:Hg19::chr2:24585157..24585182,-#_9c00f43d315f1bc6317882ed859d5688p@chr2:24585157..24585182, -
1.48e-40FFCP PHASE1:Hg19::chr14:23862929..23862940,-#_9c00f43d315f1bc6317882ed859d5688p@chr14:23862929..23862940, -
1.48e-40FFCP PHASE2:Hg19::chr12:825768..825781,-#_9c00f43d315f1bc6317882ed859d5688p@chr12:825768..825781, -
2.21e-40FFCP PHASE1:Hg19::chr12:20425310..20425314,+#_309d87b96b5a7805c312edb22d660ca4p@chr12:20425310..20425314, +
2.21e-40FFCP PHASE1:Hg19::chr14:23856854..23856864,-#_309d87b96b5a7805c312edb22d660ca4p@chr14:23856854..23856864, -
2.21e-40FFCP PHASE2:Hg19::chr14:23857002..23857008,-#_309d87b96b5a7805c312edb22d660ca4p@chr14:23857002..23857008, -
2.21e-40FFCP PHASE1:Hg19::chr4:186598476..186598485,+#_309d87b96b5a7805c312edb22d660ca4p@chr4:186598476..186598485, +
2.21e-40FFCP PHASE1:Hg19::chr14:23857002..23857008,-#_309d87b96b5a7805c312edb22d660ca4p@chr14:23857002..23857008, -
2.21e-40FFCP PHASE1:Hg19::chr11:3838082..3838123,+#_309d87b96b5a7805c312edb22d660ca4p9@PGAP2
2.21e-40FFCP PHASE2:Hg19::chr4:186598476..186598485,+#_309d87b96b5a7805c312edb22d660ca4+, p@chr4:186598476..186598485
2.21e-40FFCP PHASE2:Hg19::chr17:25568716..25568726,-#_309d87b96b5a7805c312edb22d660ca4-, p@chr17:25568716..25568726
2.21e-40FFCP PHASE1:Hg19::chr2:218843356..218843370,-#_309d87b96b5a7805c312edb22d660ca4p@chr2:218843356..218843370, -
2.21e-40FFCP PHASE2:Hg19::chr12:20425310..20425314,+#_309d87b96b5a7805c312edb22d660ca4p@chr12:20425310..20425314, +
2.21e-40FFCP PHASE2:Hg19::chr2:218843356..218843370,-#_309d87b96b5a7805c312edb22d660ca4p@chr2:218843356..218843370, -
2.21e-40FFCP PHASE1:Hg19::chr5:148803658..148803668,+#_309d87b96b5a7805c312edb22d660ca4p@chr5:148803658..148803668, +