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{{DOID
{{DOID
|id=DOID:193
|alt_id=DOID:1900
|name=reproductive organ cancer
|namespace=disease_ontology
|def="An organ system cancer that is manifested in the reproductive organs." [url:http\://en.wikipedia.org/wiki/Reproductive_system#Examples_of_cancers]
|xref=NCI:C3674;;UMLS_CUI:C0178830
|is_a=DOID:0050686
|synonym="cancer of reproductive system" RELATED [];;"malignant reproductive system neoplasm" EXACT [];;"Reproductive tumor" EXACT [NCI2004_11_17:C3674]
|comment=
|comment=
|alt_id=DOID:1900
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="An organ system cancer that is manifested in the reproductive organs." [url:http://en.wikipedia.org/wiki/Reproductive_system#Examples_of_cancers]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:193
|is_a=DOID:0050686
|is_obsolete=
|located_in=
|located_in=
|name=reproductive organ cancer
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|subset=
|preceded_by=
|synonym="cancer of reproductive system" RELATED [];;"malignant reproductive system neoplasm" EXACT [];;"Reproductive tumor" EXACT [NCI2004_11_17:C3674]
|union_of=
|xref=NCI:C3674;;UMLS_CUI:C0178830
}}
}}

Latest revision as of 16:49, 12 September 2014

Name:reproductive organ cancer
Namespace:FANTOM
Definition:"An organ system cancer that is manifested in the reproductive organs." [url:http://en.wikipedia.org/wiki/Reproductive_system#Examples_of_cancers]
Xrefs:
links:

NCI:C3674

UMLS_CUI:C0178830
Synonyms: "cancer of reproductive system" RELATED []
"malignant reproductive system neoplasm" EXACT []
"Reproductive tumor" EXACT [NCI2004_11_17:C3674]
Alt_id: DOID:1900

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:0050686(organ system cancer)



Children


is a:DOID:120 (female reproductive organ cancer),DOID:3856 (male reproductive organ cancer)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:193 (reproductive organ cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.53e-36FFCP PHASE2:Hg19::chr5:136482422..136482426,+#_389aaa7438d2c81fc5a688bb23124c65p@chr5:136482422..136482426, +
2.53e-36FFCP PHASE1:Hg19::chr5:136482422..136482426,+#_389aaa7438d2c81fc5a688bb23124c65p@chr5:136482422..136482426, +
9.95e-35FFCP PHASE2:Hg19::chr4:90332316..90332323,+#_8f96a4cd38e729ed88d870a676d502a8p@chr4:90332316..90332323, +
9.95e-35FFCP PHASE1:Hg19::chr4:90332316..90332323,+#_8f96a4cd38e729ed88d870a676d502a8p@chr4:90332316..90332323, +
9.47e-34FFCP PHASE2:Hg19::chr5:81654563..81654582,+#_97f64e379ab920a7d1dffe02e0da75f1p@chr5:81654563..81654582, +
9.47e-34FFCP PHASE1:Hg19::chr5:81654563..81654582,+#_97f64e379ab920a7d1dffe02e0da75f1p@chr5:81654563..81654582, +
2.85e-31FFCP PHASE1:Hg19::chr16:88278862..88278869,-#_52ad63b0c1830307ccaef211c0233d4ap@chr16:88278862..88278869, -
2.85e-31FFCP PHASE2:Hg19::chr16:88278862..88278869,-#_52ad63b0c1830307ccaef211c0233d4ap@chr16:88278862..88278869, -
3.66e-30FFCP PHASE1:Hg19::chr4:118247051..118247056,+#_af093785bc376e3ca52c08b1a4110e60p@chr4:118247051..118247056, +
3.66e-30FFCP PHASE2:Hg19::chr4:118247051..118247056,+#_af093785bc376e3ca52c08b1a4110e60p@chr4:118247051..118247056, +
4.09e-30FFCP PHASE2:Hg19::chr1:9262795..9262800,-#_275f0e590eb3e69cbb3c400a6259ffb2p3@ENST00000437157
4.09e-30FFCP PHASE1:Hg19::chr1:9262795..9262800,-#_275f0e590eb3e69cbb3c400a6259ffb2p3@ENST00000437157
4.87e-30FFCP PHASE1:Hg19::chr2:113981834..113981850,-#_257e27a1fd62eaf35c0e1df052b0535cp@chr2:113981834..113981850, -
4.87e-30FFCP PHASE2:Hg19::chr2:113981834..113981850,-#_257e27a1fd62eaf35c0e1df052b0535cp@chr2:113981834..113981850, -
8.57e-29FFCP PHASE2:Hg19::chr1:98206661..98206672,-#_5340c127dcc2fc6f1981fd77e6511099p@chr1:98206661..98206672, -
8.57e-29FFCP PHASE1:Hg19::chr1:98206661..98206672,-#_5340c127dcc2fc6f1981fd77e6511099p@chr1:98206661..98206672, -
9.08e-29FFCP PHASE2:Hg19::chr6:75178505..75178516,+#_d4d4e48b8ac4c85a38f0581f619b0786p@chr6:75178505..75178516, +
9.08e-29FFCP PHASE1:Hg19::chr6:75178505..75178516,+#_d4d4e48b8ac4c85a38f0581f619b0786p@chr6:75178505..75178516, +
2.56e-28FFCP PHASE1:Hg19::chr3:45152138..45152151,-#_7be680286b85df5da1a08d542a3756c8p5@CDCP1
2.56e-28FFCP PHASE2:Hg19::chr3:45152138..45152151,-#_7be680286b85df5da1a08d542a3756c8p5@CDCP1
5.36e-28FFCP PHASE1:Hg19::chr18:25694851..25694855,-#_4b6142cdf9fb79c170a926cd4e296abcp@chr18:25694851..25694855, -
5.36e-28FFCP PHASE2:Hg19::chr18:25694851..25694855,-#_4b6142cdf9fb79c170a926cd4e296abcp@chr18:25694851..25694855, -
2.97e-27FFCP PHASE2:Hg19::chr5:81654586..81654599,+#_12655851fec8558753a0c3e2c410d096p@chr5:81654586..81654599, +
2.97e-27FFCP PHASE1:Hg19::chr5:81654586..81654599,+#_12655851fec8558753a0c3e2c410d096p@chr5:81654586..81654599, +
6.84e-27FFCP PHASE2:Hg19::chr14:62024238..62024249,+#_8049bffcf03723bf3f23bfda9daa0145p@chr14:62024238..62024249, +
6.84e-27FFCP PHASE1:Hg19::chr14:62024238..62024249,+#_8049bffcf03723bf3f23bfda9daa0145p@chr14:62024238..62024249, +
2.69e-26FFCP PHASE2:Hg19::chr9:6257179..6257191,+#_327bdf7539a7f247823de36ac0f332a5p@chr9:6257179..6257191, +
2.69e-26FFCP PHASE1:Hg19::chr9:6257179..6257191,+#_327bdf7539a7f247823de36ac0f332a5p@chr9:6257179..6257191, +
8.58e-26FFCP PHASE1:Hg19::chr18:53169326..53169330,-#_67fd62d8a61ae42a47a7119f195b100dp@chr18:53169326..53169330, -
8.58e-26FFCP PHASE2:Hg19::chr18:53169326..53169330,-#_67fd62d8a61ae42a47a7119f195b100dp@chr18:53169326..53169330, -
7.19e-25FFCP PHASE1:Hg19::chr4:167068286..167068320,+#_47c0ef566ef9fd9205036e7f00af115dp@chr4:167068286..167068320, +
7.19e-25FFCP PHASE2:Hg19::chr4:167068286..167068320,+#_47c0ef566ef9fd9205036e7f00af115dp@chr4:167068286..167068320, +
1.11e-24FFCP PHASE2:Hg19::chr1:222079924..222079927,-#_8714d03b7eadaa1f40543987988f31cap@chr1:222079924..222079927, -
1.11e-24FFCP PHASE1:Hg19::chr1:222079924..222079927,-#_8714d03b7eadaa1f40543987988f31cap@chr1:222079924..222079927, -
1.98e-24FFCP PHASE2:Hg19::chr3:197639921..197639934,-#_290587a6318e799d20130b9bdbb5419ep6@IQCG
1.98e-24FFCP PHASE1:Hg19::chr3:197639921..197639934,-#_290587a6318e799d20130b9bdbb5419ep6@IQCG
2.13e-24FFCP PHASE2:Hg19::chr4:38143865..38143904,-#_396ea2a8af284dcc194a4a680704338fp@chr4:38143865..38143904, -
2.13e-24FFCP PHASE1:Hg19::chr4:38143865..38143904,-#_396ea2a8af284dcc194a4a680704338fp@chr4:38143865..38143904, -
2.23e-23FFCP PHASE2:Hg19::chr6:14671928..14671958,+#_91b94856e3bf6e3e83620e8d21d6f0c6p@chr6:14671928..14671958, +
2.23e-23FFCP PHASE1:Hg19::chr6:14671928..14671958,+#_91b94856e3bf6e3e83620e8d21d6f0c6p@chr6:14671928..14671958, +
3.29e-23FFCP PHASE2:Hg19::chr2:113982635..113982648,-#_0f2bd89fe34110063e77ea1f5e58a803p8@PAX8
3.29e-23FFCP PHASE1:Hg19::chr2:113982635..113982648,-#_0f2bd89fe34110063e77ea1f5e58a803p8@PAX8
4.07e-23FFCP PHASE2:Hg19::chr8:38008450..38008459,-#_e7f16d5786843f4af32478647e59aa54p4@STAR
4.07e-23FFCP PHASE1:Hg19::chr8:38008450..38008459,-#_e7f16d5786843f4af32478647e59aa54p4@STAR
1.67e-22FFCP PHASE2:Hg19::chr6:18497083..18497107,+#_749760d0b41461e12339c7f0f868de0fp@chr6:18497083..18497107, +
1.67e-22FFCP PHASE1:Hg19::chr6:18497083..18497107,+#_749760d0b41461e12339c7f0f868de0fp@chr6:18497083..18497107, +
3.53e-22FFCP PHASE2:Hg19::chr5:64469134..64469150,-#_b5485ae8d6a821642a7e32135e03376ap@chr5:64469134..64469150, -
3.53e-22FFCP PHASE1:Hg19::chr5:64469134..64469150,-#_b5485ae8d6a821642a7e32135e03376ap@chr5:64469134..64469150, -
1.03e-21FFCP PHASE2:Hg19::chr3:101909187..101909198,+#_bb8b9f5c72ac5d05ebffbd2a08daf55fp@chr3:101909187..101909198, +
1.03e-21FFCP PHASE1:Hg19::chr3:101909187..101909198,+#_bb8b9f5c72ac5d05ebffbd2a08daf55fp@chr3:101909187..101909198, +
1.88e-21FFCP PHASE2:Hg19::chr16:75511082..75511090,+#_405ee058c94b755de8dc1b7f0c57304cp@chr16:75511082..75511090, +
1.88e-21FFCP PHASE1:Hg19::chr16:75511082..75511090,+#_405ee058c94b755de8dc1b7f0c57304cp@chr16:75511082..75511090, +
1.88e-21FFCP PHASE2:Hg19::chr6:42724431..42724435,+#_405ee058c94b755de8dc1b7f0c57304cp@chr6:42724431..42724435, +
1.88e-21FFCP PHASE1:Hg19::chr6:42724431..42724435,+#_405ee058c94b755de8dc1b7f0c57304cp@chr6:42724431..42724435, +
1.88e-21FFCP PHASE2:Hg19::chr8:101588316..101588317,-#_405ee058c94b755de8dc1b7f0c57304cp1@AK127517
1.88e-21FFCP PHASE2:Hg19::chr7:20257461..20257472,-#_405ee058c94b755de8dc1b7f0c57304cp9@MACC1
1.88e-21FFCP PHASE2:Hg19::chr6:18496965..18496969,+#_405ee058c94b755de8dc1b7f0c57304cp@chr6:18496965..18496969, +
1.88e-21FFCP PHASE1:Hg19::chr8:101588316..101588317,-#_405ee058c94b755de8dc1b7f0c57304cp1@AK127517
1.88e-21FFCP PHASE1:Hg19::chr7:20257461..20257472,-#_405ee058c94b755de8dc1b7f0c57304cp9@MACC1
1.88e-21FFCP PHASE1:Hg19::chr6:18496965..18496969,+#_405ee058c94b755de8dc1b7f0c57304cp@chr6:18496965..18496969, +
2.14e-21FFCP PHASE1:Hg19::chr9:5621474..5621483,-#_50cf06769915bc059f06ba35d69b6084p@chr9:5621474..5621483, -
2.14e-21FFCP PHASE2:Hg19::chr9:5621474..5621483,-#_50cf06769915bc059f06ba35d69b6084p@chr9:5621474..5621483, -
6.65e-21FFCP PHASE2:Hg19::chr5:73109313..73109326,+#_672128b8ab79fe95cfd22391e7582019p4@RGNEF
6.65e-21FFCP PHASE1:Hg19::chr5:73109313..73109326,+#_672128b8ab79fe95cfd22391e7582019p4@RGNEF
2.06e-20FFCP PHASE2:Hg19::chr12:127762515..127762539,-#_3bb82fc9eea32b669472f8e853c00d05p@chr12:127762515..127762539, -
2.06e-20FFCP PHASE1:Hg19::chr12:127762515..127762539,-#_3bb82fc9eea32b669472f8e853c00d05p@chr12:127762515..127762539, -
2.39e-20FFCP PHASE2:Hg19::chr9:83566735..83566738,+#_ad986893e9027cdc7684fa1dbb5f402dp@chr9:83566735..83566738, +
2.39e-20FFCP PHASE1:Hg19::chr9:83566735..83566738,+#_ad986893e9027cdc7684fa1dbb5f402dp@chr9:83566735..83566738, +
2.76e-20FFCP PHASE1:Hg19::chr2:162931138..162931149,-#_04122dced7ec729c047a6aeb35f6e840p14@DPP4
2.76e-20FFCP PHASE2:Hg19::chr2:162931138..162931149,-#_04122dced7ec729c047a6aeb35f6e840p14@DPP4
2.93e-20FFCP PHASE1:Hg19::chr13:38083855..38083873,+#_c90e148cf588e57e436771cfa233fe70p@chr13:38083855..38083873, +
2.93e-20FFCP PHASE2:Hg19::chr13:38083855..38083873,+#_c90e148cf588e57e436771cfa233fe70p@chr13:38083855..38083873, +
4.78e-20FFCP PHASE2:Hg19::chr20:6034672..6034714,-#_e4a0b5587a60b21d5e02eab761d24a4bp2@LRRN4
4.78e-20FFCP PHASE1:Hg19::chr20:6034672..6034714,-#_e4a0b5587a60b21d5e02eab761d24a4bp2@LRRN4
1.67e-19FFCP PHASE2:Hg19::chr2:113982348..113982371,-#_f0e3e0c78c6f6de04f7e2680b0cbaecdp@chr2:113982348..113982371, -
1.67e-19FFCP PHASE1:Hg19::chr2:113982348..113982371,-#_f0e3e0c78c6f6de04f7e2680b0cbaecdp@chr2:113982348..113982371, -
2.68e-19FFCP PHASE2:Hg19::chr10:28367236..28367266,+#_017485ec98057d638c3091be6fb06ab4p@chr10:28367236..28367266, +
2.68e-19FFCP PHASE1:Hg19::chr10:28367236..28367266,+#_017485ec98057d638c3091be6fb06ab4p@chr10:28367236..28367266, +
3.69e-19FFCP PHASE1:Hg19::chr22:28901919..28901924,+#_790460b059f9098c75e844f695be9c5dp@chr22:28901919..28901924, +
3.69e-19FFCP PHASE2:Hg19::chr7:17409475..17409478,-#_790460b059f9098c75e844f695be9c5dp@chr7:17409475..17409478, -
3.69e-19FFCP PHASE1:Hg19::chr7:17409475..17409478,-#_790460b059f9098c75e844f695be9c5dp@chr7:17409475..17409478, -
3.69e-19FFCP PHASE2:Hg19::chr22:28901919..28901924,+#_790460b059f9098c75e844f695be9c5dp@chr22:28901919..28901924, +
4.36e-19FFCP PHASE1:Hg19::chr17:57841314..57841323,-#_7498ab5943bdd94befa2f420dc7ec3fbp@chr17:57841314..57841323, -
4.36e-19FFCP PHASE2:Hg19::chr17:57841314..57841323,-#_7498ab5943bdd94befa2f420dc7ec3fbp@chr17:57841314..57841323, -
5.09e-19FFCP PHASE2:Hg19::chr22:30640029..30640037,-#_3447e428e23a0ba6a6e1e7d86b6fe37fp@chr22:30640029..30640037, -
5.09e-19FFCP PHASE1:Hg19::chr22:30640029..30640037,-#_3447e428e23a0ba6a6e1e7d86b6fe37fp@chr22:30640029..30640037, -
8.53e-19FFCP PHASE2:Hg19::chr16:34980938..34980966,+#_5f64f11373bdd0a11e71ff77d7c8c3b8p1@FLJ26245
8.53e-19FFCP PHASE1:Hg19::chr16:34980938..34980966,+#_5f64f11373bdd0a11e71ff77d7c8c3b8p1@FLJ26245
8.53e-19FFCP PHASE2:Hg19::chr16:34980881..34980902,+#_5f64f11373bdd0a11e71ff77d7c8c3b8p1@ENST00000516136
8.53e-19FFCP PHASE1:Hg19::chr16:34980881..34980902,+#_5f64f11373bdd0a11e71ff77d7c8c3b8p1@ENST00000516136
9.22e-19FFCP PHASE2:Hg19::chr9:6257148..6257157,+#_eaa108d85598baeb4f9c32cb8ace508ep@chr9:6257148..6257157, +
9.22e-19FFCP PHASE1:Hg19::chr9:6257148..6257157,+#_eaa108d85598baeb4f9c32cb8ace508ep@chr9:6257148..6257157, +
1.07e-18FFCP PHASE1:Hg19::chr9:127269661..127269719,-#_4ab326cc2bb4ad182be47e567dc0af21p1@NR5A1
1.07e-18FFCP PHASE2:Hg19::chr9:127269661..127269719,-#_4ab326cc2bb4ad182be47e567dc0af21p1@NR5A1
1.27e-18FFCP PHASE1:Hg19::chr9:118435168..118435186,+#_8bf14b36e1350d0fb632d2dcc59959a3p@chr9:118435168..118435186, +
1.27e-18FFCP PHASE2:Hg19::chr9:118435168..118435186,+#_8bf14b36e1350d0fb632d2dcc59959a3p@chr9:118435168..118435186, +
2.04e-18FFCP PHASE2:Hg19::chr6:24358264..24358295,-#_4dfe60a7d452e59a4c80cccb7910c7efp2@DCDC2
2.04e-18FFCP PHASE1:Hg19::chr6:24358264..24358295,-#_4dfe60a7d452e59a4c80cccb7910c7efp2@DCDC2
2.08e-18FFCP PHASE1:Hg19::chr2:113990903..113990907,-#_dbc2b4c2abc19c18a019dbd243a66e0fp@chr2:113990903..113990907, -
2.08e-18FFCP PHASE2:Hg19::chr2:113990903..113990907,-#_dbc2b4c2abc19c18a019dbd243a66e0fp@chr2:113990903..113990907, -

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