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DOID:3119

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Name:gastrointestinal system cancer
Definition:"An organ system cancer located_in gastrointestinal tract that is manifested in organs of the gastrointestinal system." [url:http\://en.wikipedia.org/wiki/Human_gastrointestinal_tract]
Synonyms: "digestive system cancer" EXACT []
"gastrointestinal tract cancer" EXACT [NCI2004_11_17:C4890]
"GI tumor" EXACT [NCI2004_11_17:C3052]
Alt_id: DOID:8377

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:0050686(organ system cancer)



Children


is a:DOID:0060119 (pharynx cancer),FF:0100797 (colonic cancer cell line),DOID:10155 (intestinal cancer),FF:10417-106C3 (papillotubular adenocarcinoma cell line:TGBC18TKB),DOID:10534 (stomach cancer),FF:10628-108H7 (),DOID:3571 (liver cancer),DOID:8618 (oral cavity cancer)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3119 (gastrointestinal system cancer), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.76e-45FFCP PHASE1:Hg19::chr7:13545393..13545395,+#_3a801c9486010a9a25fd6e084cea2858p@chr7:13545393..13545395, +
1.76e-45FFCP PHASE2:Hg19::chr7:13545393..13545395,+#_3a801c9486010a9a25fd6e084cea2858p@chr7:13545393..13545395, +
1.46e-32FFCP PHASE2:Hg19::chr7:12997533..12997536,+#_703ebab38b9e55c2c0791f3c52fba433p@chr7:12997533..12997536, +
1.46e-32FFCP PHASE1:Hg19::chr7:12997533..12997536,+#_703ebab38b9e55c2c0791f3c52fba433p@chr7:12997533..12997536, +
2.02e-32FFCP PHASE1:Hg19::chr8:139755835..139755842,-#_6f4a0e38a1a70f9c4cef89df0692f9a2p@chr8:139755835..139755842, -
2.02e-32FFCP PHASE2:Hg19::chr8:139755835..139755842,-#_6f4a0e38a1a70f9c4cef89df0692f9a2-, p@chr8:139755835..139755842
5.55e-30FFCP PHASE2:Hg19::chr1:20813515..20813530,-#_0ae09fd3f37625f40f676543ce0e1306p@chr1:20813515..20813530, -
5.55e-30FFCP PHASE1:Hg19::chr1:20813515..20813530,-#_0ae09fd3f37625f40f676543ce0e1306p@chr1:20813515..20813530, -
2.55e-29FFCP PHASE1:Hg19::chr2:158443804..158443809,-#_7f4e093949e24eb0389cec8c1eb977abp@chr2:158443804..158443809, -
2.55e-29FFCP PHASE2:Hg19::chr20:2397889..2397925,+#_7f4e093949e24eb0389cec8c1eb977abp@chr20:2397889..2397925, +
2.55e-29FFCP PHASE1:Hg19::chr18:28860939..28860953,-#_7f4e093949e24eb0389cec8c1eb977abp@chr18:28860939..28860953, -
2.55e-29FFCP PHASE1:Hg19::chr2:130067633..130067649,-#_7f4e093949e24eb0389cec8c1eb977abp@chr2:130067633..130067649, -
2.55e-29FFCP PHASE2:Hg19::chr6:102247584..102247620,+#_7f4e093949e24eb0389cec8c1eb977abp@chr6:102247584..102247620, +
2.55e-29FFCP PHASE2:Hg19::chr16:1631093..1631103,-#_7f4e093949e24eb0389cec8c1eb977abp@chr16:1631093..1631103, -
2.55e-29FFCP PHASE2:Hg19::chr2:163942394..163942398,+#_7f4e093949e24eb0389cec8c1eb977abp@chr2:163942394..163942398, +
2.55e-29FFCP PHASE2:Hg19::chr7:27282288..27282293,-#_7f4e093949e24eb0389cec8c1eb977abp2@ENST00000519050
2.55e-29FFCP PHASE1:Hg19::chr17:63771073..63771114,-#_7f4e093949e24eb0389cec8c1eb977abp@chr17:63771073..63771114, -
2.55e-29FFCP PHASE1:Hg19::chr2:163942394..163942398,+#_7f4e093949e24eb0389cec8c1eb977abp@chr2:163942394..163942398, +
2.55e-29FFCP PHASE1:Hg19::chr16:1631093..1631103,-#_7f4e093949e24eb0389cec8c1eb977abp@chr16:1631093..1631103, -
2.55e-29FFCP PHASE1:Hg19::chr7:27282288..27282293,-#_7f4e093949e24eb0389cec8c1eb977abp2@ENST00000519050
2.55e-29FFCP PHASE2:Hg19::chr2:130067633..130067649,-#_7f4e093949e24eb0389cec8c1eb977abp@chr2:130067633..130067649, -
2.55e-29FFCP PHASE2:Hg19::chr18:28860939..28860953,-#_7f4e093949e24eb0389cec8c1eb977abp@chr18:28860939..28860953, -
2.55e-29FFCP PHASE2:Hg19::chr17:63771073..63771114,-#_7f4e093949e24eb0389cec8c1eb977abp@chr17:63771073..63771114, -
2.55e-29FFCP PHASE2:Hg19::chr7:13045950..13045959,+#_7f4e093949e24eb0389cec8c1eb977abp@chr7:13045950..13045959, +
2.55e-29FFCP PHASE2:Hg19::chr2:158443804..158443809,-#_7f4e093949e24eb0389cec8c1eb977abp@chr2:158443804..158443809, -
2.55e-29FFCP PHASE1:Hg19::chr6:102247584..102247620,+#_7f4e093949e24eb0389cec8c1eb977abp@chr6:102247584..102247620, +
2.55e-29FFCP PHASE1:Hg19::chr20:2397889..2397925,+#_7f4e093949e24eb0389cec8c1eb977abp@chr20:2397889..2397925, +
2.55e-29FFCP PHASE1:Hg19::chr7:13045950..13045959,+#_7f4e093949e24eb0389cec8c1eb977abp@chr7:13045950..13045959, +
1.85e-28FFCP PHASE2:Hg19::chr8:140614358..140614378,-#_22d048b72cb2af68de5664f918b7e726p1@KCNK9
1.85e-28FFCP PHASE1:Hg19::chr8:140614358..140614378,-#_22d048b72cb2af68de5664f918b7e726p1@KCNK9
1.19e-25FFCP PHASE1:Hg19::chr19:3068219..3068225,-#_69026c5fdaf3e98777a9e12c2d691d53p@chr19:3068219..3068225, -
1.19e-25FFCP PHASE2:Hg19::chr19:3068219..3068225,-#_69026c5fdaf3e98777a9e12c2d691d53p@chr19:3068219..3068225, -
1.27e-25FFCP PHASE1:Hg19::chr2:2850815..2850821,-#_58d0944087c6c9522789e92a42446e58p@chr2:2850815..2850821, -
1.27e-25FFCP PHASE2:Hg19::chr2:2850815..2850821,-#_58d0944087c6c9522789e92a42446e58p@chr2:2850815..2850821, -
1.37e-23FFCP PHASE2:Hg19::chr12:109747040..109747055,-#_7defa3350b2ec14f5772b10eeb43dc91p1@FOXN4
1.37e-23FFCP PHASE1:Hg19::chr12:109747040..109747055,-#_7defa3350b2ec14f5772b10eeb43dc91p1@FOXN4
5.56e-23FFCP PHASE2:Hg19::chr13:28494130..28494168,+#_e9a9bb14d484f82911a33d3df7e5cb3fp1@PDX1
5.56e-23FFCP PHASE1:Hg19::chr13:28494130..28494168,+#_e9a9bb14d484f82911a33d3df7e5cb3fp1@PDX1
7.83e-23FFCP PHASE2:Hg19::chr3:34281730..34281733,+#_bdf74c8f2acc057c2018381a2106615bp@chr3:34281730..34281733, +
7.83e-23FFCP PHASE1:Hg19::chr3:34281730..34281733,+#_bdf74c8f2acc057c2018381a2106615bp@chr3:34281730..34281733, +
1.46e-22FFCP PHASE2:Hg19::chr7:13524410..13524415,+#_c36bf6d289d40b78ba27baeece5d4fdbp@chr7:13524410..13524415, +
1.46e-22FFCP PHASE1:Hg19::chr7:13524410..13524415,+#_c36bf6d289d40b78ba27baeece5d4fdbp@chr7:13524410..13524415, +
5.6e-22FFCP PHASE1:Hg19::chr7:142457254..142457278,+#_03716795fd4355ffb5ddfdb3d179b31ep3@PRSS1
5.6e-22FFCP PHASE2:Hg19::chr7:142457254..142457278,+#_03716795fd4355ffb5ddfdb3d179b31ep3@PRSS1
5.79e-22FFCP PHASE2:Hg19::chr6:31683157..31683167,+#_34c26525943e207fc69e7b45375da1c9p3@LY6G6D
5.79e-22FFCP PHASE1:Hg19::chr6:31683157..31683167,+#_34c26525943e207fc69e7b45375da1c9p3@LY6G6D
6.21e-22FFCP PHASE1:Hg19::chr17:70614580..70614613,-#_a5f97c29276ba5be0e57cc4811ab8bd6p@chr17:70614580..70614613, -
6.21e-22FFCP PHASE2:Hg19::chr17:70614580..70614613,-#_a5f97c29276ba5be0e57cc4811ab8bd6p@chr17:70614580..70614613, -
6.67e-22FFCP PHASE1:Hg19::chr21:43815581..43815595,-#_ab2d05383d9c2b83cd114a05ea3d2d76p5@TMPRSS3
6.67e-22FFCP PHASE2:Hg19::chr21:43815581..43815595,-#_ab2d05383d9c2b83cd114a05ea3d2d76p5@TMPRSS3
7.17e-22FFCP PHASE2:Hg19::chr1:163025530..163025535,-#_85f1471e7fa7966f3660e4ee98110a79p@chr1:163025530..163025535, -
7.17e-22FFCP PHASE1:Hg19::chr1:163025530..163025535,-#_85f1471e7fa7966f3660e4ee98110a79-, p@chr1:163025530..163025535
8.27e-22FFCP PHASE1:Hg19::chr1:163025442..163025452,-#_2afd870e8fb69f6e0e185fec006b0a0fp@chr1:163025442..163025452, -
8.27e-22FFCP PHASE2:Hg19::chr1:163025442..163025452,-#_2afd870e8fb69f6e0e185fec006b0a0fp@chr1:163025442..163025452, -
4.85e-21FFCP PHASE1:Hg19::chr7:13447097..13447101,+#_0bb5e9a5e4671e970e60d72db0fdf507p@chr7:13447097..13447101, +
4.85e-21FFCP PHASE2:Hg19::chr7:13447097..13447101,+#_0bb5e9a5e4671e970e60d72db0fdf507p@chr7:13447097..13447101, +
6.72e-21FFCP PHASE1:Hg19::chr13:72358093..72358097,-#_d16b04437f2ee582512b8fb88ed688e3p@chr13:72358093..72358097, -
6.72e-21FFCP PHASE2:Hg19::chr13:72358093..72358097,-#_d16b04437f2ee582512b8fb88ed688e3p@chr13:72358093..72358097, -
5.89e-20FFCP PHASE1:Hg19::chr1:52442908..52442917,-#_c662d2b57ec2d6c67be125d4675643c0p9@RAB3B
5.89e-20FFCP PHASE1:Hg19::chr11:90181744..90181756,+#_c662d2b57ec2d6c67be125d4675643c0p@chr11:90181744..90181756, +
5.89e-20FFCP PHASE1:Hg19::chr7:150499243..150499249,-#_c662d2b57ec2d6c67be125d4675643c0p@chr7:150499243..150499249, -
5.89e-20FFCP PHASE2:Hg19::chr7:19417679..19417693,+#_c662d2b57ec2d6c67be125d4675643c0p@chr7:19417679..19417693, +
5.89e-20FFCP PHASE1:Hg19::chr7:19417679..19417693,+#_c662d2b57ec2d6c67be125d4675643c0p@chr7:19417679..19417693, +
5.89e-20FFCP PHASE2:Hg19::chr17:27382155..27382164,+#_c662d2b57ec2d6c67be125d4675643c0p@chr17:27382155..27382164, +
5.89e-20FFCP PHASE1:Hg19::chr2:130067654..130067664,-#_c662d2b57ec2d6c67be125d4675643c0p@chr2:130067654..130067664, -
5.89e-20FFCP PHASE1:Hg19::chr6:1054763..1054800,-#_c662d2b57ec2d6c67be125d4675643c0p@chr6:1054763..1054800, -
5.89e-20FFCP PHASE2:Hg19::chr6:1054763..1054800,-#_c662d2b57ec2d6c67be125d4675643c0p@chr6:1054763..1054800, -
5.89e-20FFCP PHASE2:Hg19::chr2:130067654..130067664,-#_c662d2b57ec2d6c67be125d4675643c0p@chr2:130067654..130067664, -
5.89e-20FFCP PHASE2:Hg19::chr11:90181744..90181756,+#_c662d2b57ec2d6c67be125d4675643c0p@chr11:90181744..90181756, +
5.89e-20FFCP PHASE2:Hg19::chr1:52442908..52442917,-#_c662d2b57ec2d6c67be125d4675643c0p9@RAB3B
5.89e-20FFCP PHASE2:Hg19::chr7:150499243..150499249,-#_c662d2b57ec2d6c67be125d4675643c0p@chr7:150499243..150499249, -
5.89e-20FFCP PHASE2:Hg19::chr1:223853431..223853436,-#_c662d2b57ec2d6c67be125d4675643c0p4@CAPN8
5.89e-20FFCP PHASE1:Hg19::chr17:27382155..27382164,+#_c662d2b57ec2d6c67be125d4675643c0p@chr17:27382155..27382164, +
5.89e-20FFCP PHASE1:Hg19::chr1:223853431..223853436,-#_c662d2b57ec2d6c67be125d4675643c0p4@CAPN8
6.48e-20FFCP PHASE2:Hg19::chr19:48876344..48876351,+#_799802610c761be5176ee6e3509f267ep@chr19:48876344..48876351, +
6.48e-20FFCP PHASE1:Hg19::chr9:12159267..12159271,+#_799802610c761be5176ee6e3509f267ep@chr9:12159267..12159271, +
6.48e-20FFCP PHASE2:Hg19::chr9:12159267..12159271,+#_799802610c761be5176ee6e3509f267ep@chr9:12159267..12159271, +
6.48e-20FFCP PHASE1:Hg19::chr8:61761056..61761069,+#_799802610c761be5176ee6e3509f267ep@chr8:61761056..61761069, +
6.48e-20FFCP PHASE2:Hg19::chr2:50452322..50452343,+#_799802610c761be5176ee6e3509f267ep@chr2:50452322..50452343, +
6.48e-20FFCP PHASE2:Hg19::chr8:61761056..61761069,+#_799802610c761be5176ee6e3509f267ep@chr8:61761056..61761069, +
6.48e-20FFCP PHASE1:Hg19::chr2:50452322..50452343,+#_799802610c761be5176ee6e3509f267ep@chr2:50452322..50452343, +
6.48e-20FFCP PHASE1:Hg19::chr10:102207688..102207707,+#_799802610c761be5176ee6e3509f267ep@chr10:102207688..102207707, +
6.48e-20FFCP PHASE2:Hg19::chr7:13531282..13531289,+#_799802610c761be5176ee6e3509f267ep@chr7:13531282..13531289, +
6.48e-20FFCP PHASE2:Hg19::chr12:28004664..28004668,+#_799802610c761be5176ee6e3509f267ep@chr12:28004664..28004668, +
6.48e-20FFCP PHASE2:Hg19::chr1:165198157..165198181,-#_799802610c761be5176ee6e3509f267ep@chr1:165198157..165198181, -
6.48e-20FFCP PHASE2:Hg19::chr11:90181710..90181723,+#_799802610c761be5176ee6e3509f267e+, p@chr11:90181710..90181723
6.48e-20FFCP PHASE2:Hg19::chr10:102207688..102207707,+#_799802610c761be5176ee6e3509f267ep@chr10:102207688..102207707, +
6.48e-20FFCP PHASE1:Hg19::chr8:128908649..128908661,+#_799802610c761be5176ee6e3509f267ep@chr8:128908649..128908661, +
6.48e-20FFCP PHASE1:Hg19::chr8:128808502..128808513,+#_799802610c761be5176ee6e3509f267ep@chr8:128808502..128808513, +
6.48e-20FFCP PHASE1:Hg19::chr19:48876344..48876351,+#_799802610c761be5176ee6e3509f267ep@chr19:48876344..48876351, +
6.48e-20FFCP PHASE2:Hg19::chr8:128908649..128908661,+#_799802610c761be5176ee6e3509f267ep@chr8:128908649..128908661, +
6.48e-20FFCP PHASE1:Hg19::chr7:13531282..13531289,+#_799802610c761be5176ee6e3509f267ep@chr7:13531282..13531289, +
6.48e-20FFCP PHASE2:Hg19::chr8:128808502..128808513,+#_799802610c761be5176ee6e3509f267ep@chr8:128808502..128808513, +
6.48e-20FFCP PHASE1:Hg19::chr18:53165290..53165321,-#_799802610c761be5176ee6e3509f267ep@chr18:53165290..53165321, -
6.48e-20FFCP PHASE1:Hg19::chr12:28004664..28004668,+#_799802610c761be5176ee6e3509f267ep@chr12:28004664..28004668, +
6.48e-20FFCP PHASE1:Hg19::chr11:90181710..90181723,+#_799802610c761be5176ee6e3509f267ep@chr11:90181710..90181723, +
6.48e-20FFCP PHASE1:Hg19::chr1:165198157..165198181,-#_799802610c761be5176ee6e3509f267ep@chr1:165198157..165198181, -
6.48e-20FFCP PHASE2:Hg19::chr18:53165290..53165321,-#_799802610c761be5176ee6e3509f267ep@chr18:53165290..53165321, -
7.13e-20FFCP PHASE2:Hg19::chr7:100807004..100807014,+#_cd35a5c5b2ad16ae69209dcddd043599p@chr7:100807004..100807014, +
7.13e-20FFCP PHASE1:Hg19::chr4:115788798..115788803,-#_cd35a5c5b2ad16ae69209dcddd043599p@chr4:115788798..115788803, -