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DOID:3905

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Name:lung carcinoma
Namespace:FANTOM
Definition:"A lung cancer that is located_in the lungs and has_symptom cough and has_symptom chest discomfort or pain and has_symptom weight loss and has_symptom hemoptysis." [url:https://merck.com/mmpe/sec05/ch062/ch062b.html]
Xrefs:
links:

NCI:C4878
OMIM:211980
SNOMEDCT_2010_1_31:154485001
SNOMEDCT_2010_1_31:187875007
SNOMEDCT_2010_1_31:269561006

UMLS_CUI:C0684249
Synonyms: "cancer of lung" EXACT [NCI2004_11_17:C4878]
"carcinoma OF LUNG" EXACT [MTH:460]
"carcinoma of lung" RELATED []
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006]
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:1324(lung cancer)



Children


is a:DOID:3908 (non-small cell lung carcinoma),DOID:5409 (lung small cell carcinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3905 (lung carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.75e-45FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
4.35e-40FFCP PHASE1:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
4.35e-40FFCP PHASE2:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
2.66e-30FFCP PHASE2:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE1:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE2:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
2.66e-30FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE1:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
3.09e-30FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.09e-30FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.59e-30FFCP PHASE2:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
3.59e-30FFCP PHASE1:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
7.5e-29FFCP PHASE1:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
7.5e-29FFCP PHASE2:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
8.14e-26FFCP PHASE2:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
8.14e-26FFCP PHASE1:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
3.17e-25FFCP PHASE1:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
3.17e-25FFCP PHASE2:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
2.62e-23FFCP PHASE1:Hg19::chr4:178653531..178653568,+#_ff13f51a990286586a726a44f2e602cap@chr4:178653531..178653568, +
2.62e-23FFCP PHASE1:Hg19::chr21:43917055..43917058,-#_ff13f51a990286586a726a44f2e602cap@chr21:43917055..43917058, -
2.62e-23FFCP PHASE2:Hg19::chr7:79840127..79840130,+#_ff13f51a990286586a726a44f2e602cap@chr7:79840127..79840130, +
2.62e-23FFCP PHASE2:Hg19::chr18:10085504..10085505,+#_ff13f51a990286586a726a44f2e602cap@chr18:10085504..10085505, +
2.62e-23FFCP PHASE2:Hg19::chr17:39140393..39140399,-#_ff13f51a990286586a726a44f2e602cap3@KRT40
2.62e-23FFCP PHASE2:Hg19::chr12:133040060..133040064,+#_ff13f51a990286586a726a44f2e602cap@chr12:133040060..133040064, +
2.62e-23FFCP PHASE1:Hg19::chr5:28572013..28572023,-#_ff13f51a990286586a726a44f2e602cap@chr5:28572013..28572023, -
2.62e-23FFCP PHASE1:Hg19::chr2:97626499..97626505,-#_ff13f51a990286586a726a44f2e602cap@chr2:97626499..97626505, -
2.62e-23FFCP PHASE1:Hg19::chr2:220594700..220594702,+#_ff13f51a990286586a726a44f2e602cap6@ENST00000442416
2.62e-23FFCP PHASE1:Hg19::chr14:58415850..58415853,-#_ff13f51a990286586a726a44f2e602cap@chr14:58415850..58415853, -
2.62e-23FFCP PHASE1:Hg19::chr13:76549637..76549662,+#_ff13f51a990286586a726a44f2e602cap@chr13:76549637..76549662, +
2.62e-23FFCP PHASE2:Hg19::chr15:97554594..97554599,-#_ff13f51a990286586a726a44f2e602cap@chr15:97554594..97554599, -
2.62e-23FFCP PHASE2:Hg19::chr14:58448696..58448733,-#_ff13f51a990286586a726a44f2e602cap9@SLC35F4
2.62e-23FFCP PHASE2:Hg19::chr10:121863383..121863387,-#_ff13f51a990286586a726a44f2e602cap@chr10:121863383..121863387, -
2.62e-23FFCP PHASE1:Hg19::chr7:158237237..158237241,+#_ff13f51a990286586a726a44f2e602cap@chr7:158237237..158237241, +
2.62e-23FFCP PHASE1:Hg19::chr3:95401649..95401655,-#_ff13f51a990286586a726a44f2e602cap3@ENST00000463799
2.62e-23FFCP PHASE1:Hg19::chr17:58979826..58979836,+#_ff13f51a990286586a726a44f2e602cap@chr17:58979826..58979836, +
2.62e-23FFCP PHASE1:Hg19::chr10:129704512..129704515,+#_ff13f51a990286586a726a44f2e602cap@chr10:129704512..129704515, +
2.62e-23FFCP PHASE2:Hg19::chr18:67563022..67563032,-#_ff13f51a990286586a726a44f2e602cap@chr18:67563022..67563032, -
2.62e-23FFCP PHASE1:Hg19::chr9:95426545..95426559,-#_ff13f51a990286586a726a44f2e602cap@chr9:95426545..95426559, -
2.62e-23FFCP PHASE1:Hg19::chr8:97962018..97962029,-#_ff13f51a990286586a726a44f2e602cap@chr8:97962018..97962029, -
2.62e-23FFCP PHASE2:Hg19::chr7:26590606..26590616,-#_ff13f51a990286586a726a44f2e602cap@chr7:26590606..26590616, -
2.62e-23FFCP PHASE2:Hg19::chr12:76206813..76206837,-#_ff13f51a990286586a726a44f2e602cap@chr12:76206813..76206837, -
2.62e-23FFCP PHASE1:Hg19::chr8:98073725..98073731,-#_ff13f51a990286586a726a44f2e602cap@chr8:98073725..98073731, -
2.62e-23FFCP PHASE1:Hg19::chr21:11130568..11130575,+#_ff13f51a990286586a726a44f2e602cap@chr21:11130568..11130575, +
2.62e-23FFCP PHASE1:Hg19::chr16:83649482..83649491,+#_ff13f51a990286586a726a44f2e602cap@chr16:83649482..83649491, +
2.62e-23FFCP PHASE2:Hg19::chrX:135761931..135761934,-#_ff13f51a990286586a726a44f2e602cap@chrX:135761931..135761934, -
2.62e-23FFCP PHASE1:Hg19::chr12:88178319..88178329,-#_ff13f51a990286586a726a44f2e602cap2@MKRN9P
2.62e-23FFCP PHASE2:Hg19::chr21:38295313..38295326,-#_ff13f51a990286586a726a44f2e602cap@chr21:38295313..38295326, -
2.62e-23FFCP PHASE2:Hg19::chr13:104517168..104517170,+#_ff13f51a990286586a726a44f2e602cap@chr13:104517168..104517170, +
2.62e-23FFCP PHASE1:Hg19::chr9:129234745..129234747,-#_ff13f51a990286586a726a44f2e602cap@chr9:129234745..129234747, -
2.62e-23FFCP PHASE1:Hg19::chr11:31093041..31093047,-#_ff13f51a990286586a726a44f2e602cap@chr11:31093041..31093047, -
2.62e-23FFCP PHASE1:Hg19::chr13:26155734..26155742,+#_ff13f51a990286586a726a44f2e602cap@chr13:26155734..26155742, +
2.62e-23FFCP PHASE2:Hg19::chr7:120383546..120383560,+#_ff13f51a990286586a726a44f2e602cap@chr7:120383546..120383560, +
2.62e-23FFCP PHASE2:Hg19::chr6:169224860..169224875,+#_ff13f51a990286586a726a44f2e602cap@chr6:169224860..169224875, +
2.62e-23FFCP PHASE2:Hg19::chr2:97626442..97626445,-#_ff13f51a990286586a726a44f2e602cap@chr2:97626442..97626445, -
2.62e-23FFCP PHASE2:Hg19::chr15:91143571..91143582,+#_ff13f51a990286586a726a44f2e602cap@chr15:91143571..91143582, +
2.62e-23FFCP PHASE2:Hg19::chr11:31093041..31093047,-#_ff13f51a990286586a726a44f2e602cap@chr11:31093041..31093047, -
2.62e-23FFCP PHASE1:Hg19::chr3:86701902..86701920,-#_ff13f51a990286586a726a44f2e602cap@chr3:86701902..86701920, -
2.62e-23FFCP PHASE2:Hg19::chr8:72275738..72275747,-#_ff13f51a990286586a726a44f2e602cap@chr8:72275738..72275747, -
2.62e-23FFCP PHASE1:Hg19::chr8:85893922..85893940,+#_ff13f51a990286586a726a44f2e602cap@chr8:85893922..85893940, +
2.62e-23FFCP PHASE1:Hg19::chr2:238385078..238385087,-#_ff13f51a990286586a726a44f2e602cap@chr2:238385078..238385087, -
2.62e-23FFCP PHASE2:Hg19::chr8:116215608..116215615,+#_ff13f51a990286586a726a44f2e602cap@chr8:116215608..116215615, +
2.62e-23FFCP PHASE2:Hg19::chr10:29212181..29212188,+#_ff13f51a990286586a726a44f2e602cap@chr10:29212181..29212188, +
2.62e-23FFCP PHASE2:Hg19::chrX:10852011..10852021,-#_ff13f51a990286586a726a44f2e602cap27@MID1
2.62e-23FFCP PHASE1:Hg19::chr12:84126726..84126727,-#_ff13f51a990286586a726a44f2e602cap@chr12:84126726..84126727, -
2.62e-23FFCP PHASE2:Hg19::chr8:98066259..98066270,-#_ff13f51a990286586a726a44f2e602cap@chr8:98066259..98066270, -
2.62e-23FFCP PHASE2:Hg19::chr6:137314390..137314394,-#_ff13f51a990286586a726a44f2e602cap1@ENST00000418699, p1@ENST00000432330
2.62e-23FFCP PHASE2:Hg19::chr1:188874798..188874820,+#_ff13f51a990286586a726a44f2e602cap1@ENST00000445072
2.62e-23FFCP PHASE2:Hg19::chr19:46763326..46763349,+#_ff13f51a990286586a726a44f2e602cap@chr19:46763326..46763349, +
2.62e-23FFCP PHASE1:Hg19::chr3:26426173..26426176,+#_ff13f51a990286586a726a44f2e602cap@chr3:26426173..26426176, +
2.62e-23FFCP PHASE1:Hg19::chr1:225650299..225650317,-#_ff13f51a990286586a726a44f2e602cap@chr1:225650299..225650317, -
2.62e-23FFCP PHASE2:Hg19::chr7:68735214..68735224,+#_ff13f51a990286586a726a44f2e602cap@chr7:68735214..68735224, +
2.62e-23FFCP PHASE1:Hg19::chr2:192805239..192805246,+#_ff13f51a990286586a726a44f2e602cap@chr2:192805239..192805246, +
2.62e-23FFCP PHASE2:Hg19::chr9:125306070..125306106,+#_ff13f51a990286586a726a44f2e602cap@chr9:125306070..125306106, +
2.62e-23FFCP PHASE2:Hg19::chr6:166575975..166575983,-#_ff13f51a990286586a726a44f2e602cap@chr6:166575975..166575983, -
2.62e-23FFCP PHASE2:Hg19::chr2:8803669..8803680,-#_ff13f51a990286586a726a44f2e602cap@chr2:8803669..8803680, -
2.62e-23FFCP PHASE2:Hg19::chr15:71685918..71685922,-#_ff13f51a990286586a726a44f2e602cap@chr15:71685918..71685922, -
2.62e-23FFCP PHASE1:Hg19::chr7:84651827..84651832,-#_ff13f51a990286586a726a44f2e602cap@chr7:84651827..84651832, -
2.62e-23FFCP PHASE1:Hg19::chr4:3344577..3344588,+#_ff13f51a990286586a726a44f2e602cap@chr4:3344577..3344588, +

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