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{{DOID
 
{{DOID
|id=DOID:4929
+
|alt_id=
|name=tubular adenocarcinoma
 
|namespace=disease_ontology
 
|def="An adenocarcinoma that derives_from epithelial cells originating in glandular tissue. The tumor has branched angular tubules embedded in a loose fibrous stroma." [url:http://onlinelibrary.wiley.com/store/10.1002/dc.2161/asset/2161_ftp.pdf?v=1&t=gpju9amb&s=f4e446d3a3c1e806325be5d11994dc6fb4670edf]
 
|xref=MSH:D000230;;NCI:C65192;;SNOMEDCT_2010_1_31:4631006;;UMLS_CUI:C0205645
 
|is_a=DOID:299
 
|synonym="tubular adenocarcinoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:4631006];;"tubular carcinoma" EXACT [NCI2004_11_17:C3682]
 
 
|comment=
 
|comment=
|alt_id=
 
|disjoint_from=
 
|union_of=
 
 
|created_by=
 
|created_by=
|obo_creation_date=
+
|def="An adenocarcinoma that derives_from epithelial cells originating in glandular tissue. The tumor has branched angular tubules embedded in a loose fibrous stroma." [url:http://onlinelibrary.wiley.com/store/10.1002/dc.2161/asset/2161_ftp.pdf?v
|subset=
 
 
|derives_from=
 
|derives_from=
 
|develops_from=
 
|develops_from=
 +
|disjoint_from=
 
|has_quality=
 
|has_quality=
 +
|id=DOID:4929
 +
|is_a=DOID:299
 +
|is_obsolete=
 
|located_in=
 
|located_in=
 +
|name=tubular adenocarcinoma
 +
|namespace=FANTOM
 +
|obo_creation_date=
 
|part_of=
 
|part_of=
 +
|preceded_by=
 
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
 
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
+
|subset=
|preceded_by=
+
|synonym="tubular adenocarcinoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:4631006];;"tubular carcinoma" EXACT [NCI2004_11_17:C3682]
 +
|union_of=
 +
|xref=MSH:D000230;;NCI:C65192;;SNOMEDCT_2010_1_31:4631006;;UMLS_CUI:C0205645
 
}}
 
}}

Latest revision as of 07:51, 12 September 2014

Name:tubular adenocarcinoma
Namespace:FANTOM
Definition:"An adenocarcinoma that derives_from epithelial cells originating in glandular tissue. The tumor has branched angular tubules embedded in a loose fibrous stroma." [url:http://onlinelibrary.wiley.com/store/10.1002/dc.2161/asset/2161_ftp.pdf?v
Xrefs:
links:

MSH:D000230
NCI:C65192
SNOMEDCT_2010_1_31:4631006

UMLS_CUI:C0205645
Synonyms: "tubular adenocarcinoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:4631006]
"tubular carcinoma" EXACT [NCI2004_11_17:C3682]

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:299(adenocarcinoma)



Children


is a:FF:10417-106C3 (papillotubular adenocarcinoma cell line:TGBC18TKB),FF:10628-108H7 (),FF:10797-110I5 (tubular adenocarcinoma cell line:SUIT-2)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:4929 (tubular adenocarcinoma), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.75e-130FFCP PHASE2:Hg19::chr10:114885594..114885600,+#_8c1feb621ff4fe9813f07ca3091877a4+, p@chr10:114885594..114885600
1.75e-130FFCP PHASE1:Hg19::chr10:114885594..114885600,+#_8c1feb621ff4fe9813f07ca3091877a4p@chr10:114885594..114885600, +
1.55e-98FFCP PHASE2:Hg19::chr10:114885416..114885423,+#_6f559237635f45a587e54917aa4b5c95p@chr10:114885416..114885423, +
1.55e-98FFCP PHASE1:Hg19::chr2:113425862..113425864,+#_6f559237635f45a587e54917aa4b5c95p@chr2:113425862..113425864, +
1.55e-98FFCP PHASE1:Hg19::chr9:38059452..38059455,-#_6f559237635f45a587e54917aa4b5c95p@chr9:38059452..38059455, -
1.55e-98FFCP PHASE1:Hg19::chr19:49545691..49545692,+#_6f559237635f45a587e54917aa4b5c95p@chr19:49545691..49545692, +
1.55e-98FFCP PHASE1:Hg19::chr7:98796685..98796688,-#_6f559237635f45a587e54917aa4b5c95p@chr7:98796685..98796688, -
1.55e-98FFCP PHASE2:Hg19::chr19:15923954..15923958,-#_6f559237635f45a587e54917aa4b5c95p@chr19:15923954..15923958, -
1.55e-98FFCP PHASE1:Hg19::chr19:15923954..15923958,-#_6f559237635f45a587e54917aa4b5c95p@chr19:15923954..15923958, -
1.55e-98FFCP PHASE1:Hg19::chr7:99779265..99779276,+#_6f559237635f45a587e54917aa4b5c95p15@STAG3
1.55e-98FFCP PHASE2:Hg19::chr11:65144695..65144697,-#_6f559237635f45a587e54917aa4b5c95p@chr11:65144695..65144697, -
1.55e-98FFCP PHASE2:Hg19::chr2:113425862..113425864,+#_6f559237635f45a587e54917aa4b5c95p@chr2:113425862..113425864, +
1.55e-98FFCP PHASE2:Hg19::chr9:38059452..38059455,-#_6f559237635f45a587e54917aa4b5c95p@chr9:38059452..38059455, -
1.55e-98FFCP PHASE1:Hg19::chr16:1128952..1128957,+#_6f559237635f45a587e54917aa4b5c95p4@SSTR5
1.55e-98FFCP PHASE1:Hg19::chr10:114885416..114885423,+#_6f559237635f45a587e54917aa4b5c95p@chr10:114885416..114885423, +
1.55e-98FFCP PHASE2:Hg19::chr7:45928212..45928215,+#_6f559237635f45a587e54917aa4b5c95p14@IGFBP1
1.55e-98FFCP PHASE2:Hg19::chr7:98807901..98807908,-#_6f559237635f45a587e54917aa4b5c95p@chr7:98807901..98807908, -
1.55e-98FFCP PHASE1:Hg19::chr11:65144695..65144697,-#_6f559237635f45a587e54917aa4b5c95p@chr11:65144695..65144697, -
1.55e-98FFCP PHASE2:Hg19::chr20:42980646..42980651,+#_6f559237635f45a587e54917aa4b5c95p@chr20:42980646..42980651, +
1.55e-98FFCP PHASE1:Hg19::chr2:109605568..109605573,-#_6f559237635f45a587e54917aa4b5c95p6@EDAR
1.55e-98FFCP PHASE1:Hg19::chr15:20093569..20093572,+#_6f559237635f45a587e54917aa4b5c95p@chr15:20093569..20093572, +
1.55e-98FFCP PHASE1:Hg19::chr16:1129001..1129004,+#_6f559237635f45a587e54917aa4b5c95p6@SSTR5
1.55e-98FFCP PHASE1:Hg19::chr7:45928212..45928215,+#_6f559237635f45a587e54917aa4b5c95p14@IGFBP1
1.55e-98FFCP PHASE2:Hg19::chr16:1128952..1128957,+#_6f559237635f45a587e54917aa4b5c95p4@SSTR5
1.55e-98FFCP PHASE2:Hg19::chr19:49545691..49545692,+#_6f559237635f45a587e54917aa4b5c95p@chr19:49545691..49545692, +
1.55e-98FFCP PHASE1:Hg19::chr7:98807901..98807908,-#_6f559237635f45a587e54917aa4b5c95p@chr7:98807901..98807908, -
1.55e-98FFCP PHASE2:Hg19::chr2:109605568..109605573,-#_6f559237635f45a587e54917aa4b5c95p6@EDAR
1.55e-98FFCP PHASE2:Hg19::chr15:20093569..20093572,+#_6f559237635f45a587e54917aa4b5c95p@chr15:20093569..20093572, +
1.55e-98FFCP PHASE2:Hg19::chr7:98796685..98796688,-#_6f559237635f45a587e54917aa4b5c95p@chr7:98796685..98796688, -
1.55e-98FFCP PHASE2:Hg19::chr16:1129001..1129004,+#_6f559237635f45a587e54917aa4b5c95p6@SSTR5
1.55e-98FFCP PHASE1:Hg19::chr20:42980646..42980651,+#_6f559237635f45a587e54917aa4b5c95p@chr20:42980646..42980651, +
1.55e-98FFCP PHASE2:Hg19::chr7:99779265..99779276,+#_6f559237635f45a587e54917aa4b5c95p15@STAG3
4.22e-98FFCP PHASE1:Hg19::chr10:101691118..101691135,-#_e8d27c0545f9198c73ab7c80a4c77f6dp6@DNMBP
4.22e-98FFCP PHASE2:Hg19::chr10:101691118..101691135,-#_e8d27c0545f9198c73ab7c80a4c77f6dp6@DNMBP
1.56e-79FFCP PHASE2:Hg19::chr10:114135850..114135859,+#_646e6bd465ce4fed57389bb9a3f97e83p21@ACSL5
1.56e-79FFCP PHASE1:Hg19::chr10:114135850..114135859,+#_646e6bd465ce4fed57389bb9a3f97e83p21@ACSL5
2.84e-66FFCP PHASE1:Hg19::chr9:117647523..117647530,+#_f26955b82b2531bbc262f89776d84896p@chr9:117647523..117647530, +
2.84e-66FFCP PHASE2:Hg19::chr9:117647523..117647530,+#_f26955b82b2531bbc262f89776d84896p@chr9:117647523..117647530, +
2.69e-57FFCP PHASE2:Hg19::chr10:114135865..114135874,+#_6a52d39038419f013168d76795a6d80bp16@ACSL5
2.69e-57FFCP PHASE1:Hg19::chr10:114135865..114135874,+#_6a52d39038419f013168d76795a6d80bp16@ACSL5
8.47e-57FFCP PHASE1:Hg19::chr3:195603779..195603786,+#_4ce93af558763f264428dbd3d8d5f032p@chr3:195603779..195603786, +
8.47e-57FFCP PHASE2:Hg19::chr3:195603779..195603786,+#_4ce93af558763f264428dbd3d8d5f032p@chr3:195603779..195603786, +
2.74e-50FFCP PHASE2:Hg19::chr13:99405077..99405084,-#_5aa09ccb26df86e6a20f1480fadc9657p5@SLC15A1
2.74e-50FFCP PHASE1:Hg19::chr10:4007246..4007251,+#_5aa09ccb26df86e6a20f1480fadc9657+, p@chr10:4007246..4007251
2.74e-50FFCP PHASE2:Hg19::chr4:93623257..93623261,+#_5aa09ccb26df86e6a20f1480fadc9657p@chr4:93623257..93623261, +
2.74e-50FFCP PHASE2:Hg19::chr10:4007246..4007251,+#_5aa09ccb26df86e6a20f1480fadc9657p@chr10:4007246..4007251, +
2.74e-50FFCP PHASE1:Hg19::chr13:99405077..99405084,-#_5aa09ccb26df86e6a20f1480fadc9657p5@SLC15A1
2.74e-50FFCP PHASE2:Hg19::chr7:98595103..98595105,-#_5aa09ccb26df86e6a20f1480fadc9657p@chr7:98595103..98595105, -
2.74e-50FFCP PHASE1:Hg19::chr3:139035972..139036016,-#_5aa09ccb26df86e6a20f1480fadc9657p@chr3:139035972..139036016, -
2.74e-50FFCP PHASE1:Hg19::chr4:93623257..93623261,+#_5aa09ccb26df86e6a20f1480fadc9657p@chr4:93623257..93623261, +
2.74e-50FFCP PHASE1:Hg19::chr19:49545646..49545652,+#_5aa09ccb26df86e6a20f1480fadc9657p@chr19:49545646..49545652, +
2.74e-50FFCP PHASE1:Hg19::chr12:78224442..78224455,+#_5aa09ccb26df86e6a20f1480fadc9657p26@NAV3
2.74e-50FFCP PHASE2:Hg19::chr11:119056147..119056152,+#_5aa09ccb26df86e6a20f1480fadc9657p3@PDZD3
2.74e-50FFCP PHASE1:Hg19::chr7:98595103..98595105,-#_5aa09ccb26df86e6a20f1480fadc9657p@chr7:98595103..98595105, -
2.74e-50FFCP PHASE2:Hg19::chr3:139035972..139036016,-#_5aa09ccb26df86e6a20f1480fadc9657p@chr3:139035972..139036016, -
2.74e-50FFCP PHASE1:Hg19::chr11:119056147..119056152,+#_5aa09ccb26df86e6a20f1480fadc9657p3@PDZD3
2.74e-50FFCP PHASE2:Hg19::chr12:78224442..78224455,+#_5aa09ccb26df86e6a20f1480fadc9657p26@NAV3
2.74e-50FFCP PHASE2:Hg19::chr19:49545646..49545652,+#_5aa09ccb26df86e6a20f1480fadc9657p@chr19:49545646..49545652, +
4.52e-50FFCP PHASE1:Hg19::chr7:98870790..98870795,+#_2a1ba24c35be61a4343ec8cb2ac70073p7@MYH16
4.52e-50FFCP PHASE1:Hg19::chr11:69867159..69867175,-#_2a1ba24c35be61a4343ec8cb2ac70073p3@ENST00000528507
4.52e-50FFCP PHASE1:Hg19::chr20:61339609..61339610,+#_2a1ba24c35be61a4343ec8cb2ac70073p@chr20:61339609..61339610, +
4.52e-50FFCP PHASE2:Hg19::chr2:109605616..109605626,-#_2a1ba24c35be61a4343ec8cb2ac70073p5@EDAR
4.52e-50FFCP PHASE1:Hg19::chr16:88355328..88355348,+#_2a1ba24c35be61a4343ec8cb2ac70073p@chr16:88355328..88355348, +
4.52e-50FFCP PHASE2:Hg19::chr2:40184895..40184905,-#_2a1ba24c35be61a4343ec8cb2ac70073p@chr2:40184895..40184905, -
4.52e-50FFCP PHASE2:Hg19::chr22:30653778..30653783,-#_2a1ba24c35be61a4343ec8cb2ac70073p@chr22:30653778..30653783, -
4.52e-50FFCP PHASE2:Hg19::chr7:98870980..98870981,+#_2a1ba24c35be61a4343ec8cb2ac70073p8@MYH16
4.52e-50FFCP PHASE1:Hg19::chr2:40184895..40184905,-#_2a1ba24c35be61a4343ec8cb2ac70073-, p@chr2:40184895..40184905
4.52e-50FFCP PHASE2:Hg19::chr20:61339609..61339610,+#_2a1ba24c35be61a4343ec8cb2ac70073p@chr20:61339609..61339610, +
4.52e-50FFCP PHASE1:Hg19::chr7:98870980..98870981,+#_2a1ba24c35be61a4343ec8cb2ac70073p8@MYH16
4.52e-50FFCP PHASE1:Hg19::chr13:23368290..23368299,+#_2a1ba24c35be61a4343ec8cb2ac70073p@chr13:23368290..23368299, +
4.52e-50FFCP PHASE2:Hg19::chr7:98870790..98870795,+#_2a1ba24c35be61a4343ec8cb2ac70073p7@MYH16
4.52e-50FFCP PHASE1:Hg19::chr22:30653778..30653783,-#_2a1ba24c35be61a4343ec8cb2ac70073p@chr22:30653778..30653783, -
4.52e-50FFCP PHASE2:Hg19::chr16:88355328..88355348,+#_2a1ba24c35be61a4343ec8cb2ac70073p@chr16:88355328..88355348, +
4.52e-50FFCP PHASE2:Hg19::chr11:69867159..69867175,-#_2a1ba24c35be61a4343ec8cb2ac70073p3@ENST00000528507
4.52e-50FFCP PHASE1:Hg19::chr7:150037547..150037552,-#_2a1ba24c35be61a4343ec8cb2ac70073p10@RARRES2
4.52e-50FFCP PHASE1:Hg19::chr2:109605616..109605626,-#_2a1ba24c35be61a4343ec8cb2ac70073p5@EDAR
4.52e-50FFCP PHASE2:Hg19::chr13:23368290..23368299,+#_2a1ba24c35be61a4343ec8cb2ac70073p@chr13:23368290..23368299, +
4.52e-50FFCP PHASE2:Hg19::chr7:150037547..150037552,-#_2a1ba24c35be61a4343ec8cb2ac70073p10@RARRES2
4.0e-45FFCP PHASE2:Hg19::chr3:195603547..195603555,-#_4aa7032e89e48e881a298060e7a16b8bp21@TNK2
4.0e-45FFCP PHASE1:Hg19::chr3:195603547..195603555,-#_4aa7032e89e48e881a298060e7a16b8bp21@TNK2
6.83e-37FFCP PHASE1:Hg19::chr7:102793355..102793366,+#_e71f823af56635fabf4bb82a313ebec3p@chr7:102793355..102793366, +
6.83e-37FFCP PHASE2:Hg19::chr7:102793355..102793366,+#_e71f823af56635fabf4bb82a313ebec3p@chr7:102793355..102793366, +
3.61e-34FFCP PHASE2:Hg19::chr21:40985187..40985202,-#_d3ce14c25f7b77f65ae7f4b521201e24p7@C21orf88
3.61e-34FFCP PHASE2:Hg19::chr3:138665669..138665685,-#_d3ce14c25f7b77f65ae7f4b521201e24p11@FOXL2
3.61e-34FFCP PHASE1:Hg19::chr21:40985187..40985202,-#_d3ce14c25f7b77f65ae7f4b521201e24p7@C21orf88
3.61e-34FFCP PHASE1:Hg19::chr16:86612092..86612099,+#_d3ce14c25f7b77f65ae7f4b521201e24p6@FOXL1
3.61e-34FFCP PHASE2:Hg19::chr19:49545674..49545685,+#_d3ce14c25f7b77f65ae7f4b521201e24p@chr19:49545674..49545685, +
3.61e-34FFCP PHASE1:Hg19::chr6:1054763..1054800,-#_d3ce14c25f7b77f65ae7f4b521201e24p@chr6:1054763..1054800, -
3.61e-34FFCP PHASE1:Hg19::chr19:51462404..51462413,-#_d3ce14c25f7b77f65ae7f4b521201e24p@chr19:51462404..51462413, -
3.61e-34FFCP PHASE2:Hg19::chr19:51462404..51462413,-#_d3ce14c25f7b77f65ae7f4b521201e24p@chr19:51462404..51462413, -
3.61e-34FFCP PHASE2:Hg19::chr13:107026326..107026335,-#_d3ce14c25f7b77f65ae7f4b521201e24p@chr13:107026326..107026335, -
3.61e-34FFCP PHASE1:Hg19::chr4:143369478..143369483,-#_d3ce14c25f7b77f65ae7f4b521201e24p@chr4:143369478..143369483, -
3.61e-34FFCP PHASE2:Hg19::chr4:143369478..143369483,-#_d3ce14c25f7b77f65ae7f4b521201e24-, p@chr4:143369478..143369483
3.61e-34FFCP PHASE2:Hg19::chr6:1054763..1054800,-#_d3ce14c25f7b77f65ae7f4b521201e24p@chr6:1054763..1054800, -
3.61e-34FFCP PHASE1:Hg19::chr13:107026326..107026335,-#_d3ce14c25f7b77f65ae7f4b521201e24p@chr13:107026326..107026335, -
3.61e-34FFCP PHASE1:Hg19::chr3:138665669..138665685,-#_d3ce14c25f7b77f65ae7f4b521201e24p11@FOXL2
3.61e-34FFCP PHASE1:Hg19::chr19:49545674..49545685,+#_d3ce14c25f7b77f65ae7f4b521201e24p@chr19:49545674..49545685, +
3.61e-34FFCP PHASE2:Hg19::chr16:86612092..86612099,+#_d3ce14c25f7b77f65ae7f4b521201e24p6@FOXL1
5.04e-34FFCP PHASE1:Hg19::chr7:45928178..45928184,+#_7f827e64679158de01932fc56108ee15p10@IGFBP1
5.04e-34FFCP PHASE1:Hg19::chr7:98870435..98870449,+#_7f827e64679158de01932fc56108ee15p6@MYH16