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DOID:77: Difference between revisions

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{{DOID
{{DOID
|id=DOID:77
|alt_id=DOID:27;;DOID:944
|name=gastrointestinal system disease
|namespace=disease_ontology
|def="A disease of anatomical entity that is located_in the gastrointestinal tract." [url:http://en.wikipedia.org/wiki/Human_gastrointestinal_tract]
|xref=ICD9CM:520-579.99;;MSH:D004066;;NCI:C2990;;SNOMEDCT_2010_1_31:155629009;;SNOMEDCT_2010_1_31:155847001;;SNOMEDCT_2010_1_31:197575000;;SNOMEDCT_2010_1_31:266483008;;SNOMEDCT_2010_1_31:53619000;;UMLS_CUI:C0012242
|is_a=DOID:7
|synonym="alimentary system disease" EXACT [];;"digestive system disorder" EXACT [];;"Gastroenteropathy" EXACT [SNOMEDCT_2005_07_31:25374005];;"gastrointestinal disease" EXACT [];;"gastrointestinal disorder" EXACT [CSP2005:1248-3545];;"GIT disease" EXACT [SNOMEDCT_2005_07_31:53619000]
|comment=
|comment=
|alt_id=DOID:27;;DOID:944
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A disease of anatomical entity that is located_in the gastrointestinal tract." [url:http://en.wikipedia.org/wiki/Human_gastrointestinal_tract]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:77
|is_a=DOID:7
|is_obsolete=
|located_in=
|located_in=
|name=gastrointestinal system disease
|namespace=disease_ontology
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|subset=
|preceded_by=
|synonym="alimentary system disease" EXACT [];;"digestive system disorder" EXACT [];;"Gastroenteropathy" EXACT [SNOMEDCT_2005_07_31:25374005];;"gastrointestinal disease" EXACT [];;"gastrointestinal disorder" EXACT [CSP2005:1248-3545];;"GIT disease" EXACT [SNOMEDCT_2005_07_31:53619000]
|union_of=
|xref=ICD9CM:520-579.99;;MSH:D004066;;NCI:C2990;;SNOMEDCT_2010_1_31:155629009;;SNOMEDCT_2010_1_31:155847001;;SNOMEDCT_2010_1_31:197575000;;SNOMEDCT_2010_1_31:266483008;;SNOMEDCT_2010_1_31:53619000;;UMLS_CUI:C0012242
}}
}}

Revision as of 10:36, 12 September 2014

Name:gastrointestinal system disease
Namespace:disease_ontology
Definition:"A disease of anatomical entity that is located_in the gastrointestinal tract." [url:http://en.wikipedia.org/wiki/Human_gastrointestinal_tract]
Xrefs:
links:

ICD9CM:520-579.99
MSH:D004066
NCI:C2990
SNOMEDCT_2010_1_31:155629009
SNOMEDCT_2010_1_31:155847001
SNOMEDCT_2010_1_31:197575000
SNOMEDCT_2010_1_31:266483008
SNOMEDCT_2010_1_31:53619000

UMLS_CUI:C0012242
Synonyms: "alimentary system disease" EXACT []
"digestive system disorder" EXACT []
"Gastroenteropathy" EXACT [SNOMEDCT_2005_07_31:25374005]
"gastrointestinal disease" EXACT []
"gastrointestinal disorder" EXACT [CSP2005:1248-3545]
"GIT disease" EXACT [SNOMEDCT_2005_07_31:53619000]
Alt_id: DOID:27
DOID:944

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:7(disease of anatomical entity)



Children


is a:DOID:3118 (hepatobiliary disease),DOID:403 (mouth disease)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:77 (gastrointestinal system disease), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results