FF:10019-101D1: Difference between revisions

Latest revision as of 12:14, 3 June 2020

Name:	lung, adult, pool1
Species:	Human (Homo sapiens)
Library ID:	CNhs10625
Sample type:	tissues
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	lung
dev stage	46,65,94 years old adult
sex	mixed
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	Ambion
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	0910061 -10
catalog number	Cat:AM6000 Lot:0910061 -10
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-ToTALLY-RNA-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005303

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs10625		CAGE		DRX008678		DRR009550

Accession ID Hg19

Library id		BAM		CTSS
CNhs10625		DRZ000975		DRZ002360

Accession ID Hg38

Library id		BAM		CTSS
CNhs10625		DRZ012325		DRZ013710

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

HumanCAGEScan Download raw sequence, BAM & CTSS

Library id		3prime-FASTQ		5prime-FASTQ		BAM		CTSS
NCig10020		download		download		download		download

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.113
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0.0441
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.199
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0.552
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0441
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0.0441
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0.378
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0.0441
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.525
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.186
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0.165
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0441
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0.0441
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.204
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.235
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0.0841
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.0438
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.525
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.0841
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0.0441
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.687
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0.902
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0.0297
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.397
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0.0841
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0.0841
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0.0441
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.228
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0.0441
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.462
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.432
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.0841
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.215
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.121
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.0441
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.0441
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.0441
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.121
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.441
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0.0441
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.121
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0.0841
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.268
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.0441
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.0441
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.466
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.0441
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.154
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0.0441
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.154
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0.0441
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0.0441
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0.0841
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.279
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.0441
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0.0441
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0.215
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.0841
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.0921
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0.316
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0.0441
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0.731
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0.121
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10625

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.647
MA0003.1	MA0003.1	0.123
MA0004.1	MA0004.1	0.121
MA0006.1	MA0006.1	0.119
MA0007.1	MA0007.1	0.253
MA0009.1	MA0009.1	0.115
MA0014.1	MA0014.1	0.988
MA0017.1	MA0017.1	0.799
MA0018.2	MA0018.2	0.87
MA0019.1	MA0019.1	0.0234
MA0024.1	MA0024.1	0.0494
MA0025.1	MA0025.1	0.0874
MA0027.1	MA0027.1	0.629
MA0028.1	MA0028.1	1.65541e-8
MA0029.1	MA0029.1	0.247
MA0030.1	MA0030.1	2.55577e-6
MA0031.1	MA0031.1	1.67065e-4
MA0035.2	MA0035.2	0.797
MA0038.1	MA0038.1	0.929
MA0039.2	MA0039.2	0.0575
MA0040.1	MA0040.1	0.31
MA0041.1	MA0041.1	0.0854
MA0042.1	MA0042.1	0.124
MA0043.1	MA0043.1	0.619
MA0046.1	MA0046.1	0.00112
MA0047.2	MA0047.2	1.73008e-7
MA0048.1	MA0048.1	0.00892
MA0050.1	MA0050.1	8.53737e-7
MA0051.1	MA0051.1	6.92266e-4
MA0052.1	MA0052.1	4.67961e-4
MA0055.1	MA0055.1	9.80005e-4
MA0057.1	MA0057.1	0.817
MA0058.1	MA0058.1	0.0798
MA0059.1	MA0059.1	0.0119
MA0060.1	MA0060.1	0.169
MA0061.1	MA0061.1	0.356
MA0062.2	MA0062.2	1.83256e-8
MA0065.2	MA0065.2	0.226
MA0066.1	MA0066.1	0.149
MA0067.1	MA0067.1	0.719
MA0068.1	MA0068.1	2.8024e-4
MA0069.1	MA0069.1	0.681
MA0070.1	MA0070.1	0.293
MA0071.1	MA0071.1	0.0548
MA0072.1	MA0072.1	0.194
MA0073.1	MA0073.1	0.958
MA0074.1	MA0074.1	0.936
MA0076.1	MA0076.1	6.54783e-10
MA0077.1	MA0077.1	0.899
MA0078.1	MA0078.1	0.168
MA0079.2	MA0079.2	0.0645
MA0080.2	MA0080.2	6.61508e-7
MA0081.1	MA0081.1	0.28
MA0083.1	MA0083.1	0.00395
MA0084.1	MA0084.1	0.771
MA0087.1	MA0087.1	0.138
MA0088.1	MA0088.1	8.23498e-4
MA0090.1	MA0090.1	0.0743
MA0091.1	MA0091.1	0.838
MA0092.1	MA0092.1	0.954
MA0093.1	MA0093.1	0.105
MA0099.2	MA0099.2	1.65037e-6
MA0100.1	MA0100.1	0.812
MA0101.1	MA0101.1	0.871
MA0102.2	MA0102.2	0.00168
MA0103.1	MA0103.1	0.268
MA0104.2	MA0104.2	0.00118
MA0105.1	MA0105.1	0.00825
MA0106.1	MA0106.1	0.0375
MA0107.1	MA0107.1	0.973
MA0108.2	MA0108.2	1.08349e-16
MA0111.1	MA0111.1	0.616
MA0112.2	MA0112.2	0.813
MA0113.1	MA0113.1	0.186
MA0114.1	MA0114.1	0.149
MA0115.1	MA0115.1	0.565
MA0116.1	MA0116.1	0.0395
MA0117.1	MA0117.1	0.304
MA0119.1	MA0119.1	0.67
MA0122.1	MA0122.1	0.0993
MA0124.1	MA0124.1	0.84
MA0125.1	MA0125.1	0.904
MA0131.1	MA0131.1	0.117
MA0135.1	MA0135.1	0.692
MA0136.1	MA0136.1	9.76517e-4
MA0137.2	MA0137.2	1.38105e-4
MA0138.2	MA0138.2	0.54
MA0139.1	MA0139.1	0.541
MA0140.1	MA0140.1	0.983
MA0141.1	MA0141.1	0.0542
MA0142.1	MA0142.1	0.359
MA0143.1	MA0143.1	0.437
MA0144.1	MA0144.1	0.0026
MA0145.1	MA0145.1	0.0225
MA0146.1	MA0146.1	0.532
MA0147.1	MA0147.1	1.85274e-4
MA0148.1	MA0148.1	8.25543e-6
MA0149.1	MA0149.1	0.115
MA0150.1	MA0150.1	0.0783
MA0152.1	MA0152.1	0.959
MA0153.1	MA0153.1	5.57892e-7
MA0154.1	MA0154.1	0.986
MA0155.1	MA0155.1	0.526
MA0156.1	MA0156.1	0.202
MA0157.1	MA0157.1	0.0164
MA0159.1	MA0159.1	0.803
MA0160.1	MA0160.1	0.385
MA0162.1	MA0162.1	0.929
MA0163.1	MA0163.1	5.86178e-6
MA0164.1	MA0164.1	0.0827
MA0258.1	MA0258.1	0.232
MA0259.1	MA0259.1	0.0102

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10625

Novel motif	Logo	P-value
1	1	0.0917
10	10	0.0122
100	100	0.189
101	101	0.658
102	102	0.838
103	103	0.449
104	104	0.975
105	105	0.417
106	106	0.16
107	107	0.0393
108	108	0.92
109	109	0.239
11	11	0.236
110	110	0.313
111	111	0.0858
112	112	0.711
113	113	0.834
114	114	0.0381
115	115	0.248
116	116	0.158
117	117	0.0293
118	118	0.0386
119	119	0.208
12	12	0.611
120	120	0.0339
121	121	0.471
122	122	0.655
123	123	0.0135
124	124	0.816
125	125	0.165
126	126	0.192
127	127	0.935
128	128	0.33
129	129	0.0187
13	13	0.338
130	130	0.424
131	131	0.0548
132	132	0.456
133	133	0.0548
134	134	0.237
135	135	0.0286
136	136	0.776
137	137	0.256
138	138	0.998
139	139	0.336
14	14	0.727
140	140	0.0552
141	141	0.23
142	142	0.373
143	143	0.413
144	144	0.589
145	145	0.553
146	146	0.243
147	147	0.808
148	148	0.444
149	149	0.332
15	15	0.421
150	150	0.863
151	151	0.873
152	152	0.0344
153	153	0.642
154	154	0.479
155	155	0.385
156	156	0.994
157	157	0.591
158	158	0.527
159	159	0.852
16	16	0.951
160	160	0.941
161	161	0.348
162	162	0.983
163	163	0.701
164	164	0.0169
165	165	0.0131
166	166	0.587
167	167	0.00482
168	168	0.15
169	169	0.693
17	17	0.958
18	18	0.0805
19	19	0.37
2	2	0.0707
20	20	0.127
21	21	0.454
22	22	0.593
23	23	0.0823
24	24	0.618
25	25	0.466
26	26	0.393
27	27	0.635
28	28	0.889
29	29	0.0289
3	3	0.276
30	30	0.0237
31	31	0.999
32	32	0.68
33	33	0.517
34	34	0.168
35	35	0.203
36	36	0.0759
37	37	0.441
38	38	0.941
39	39	0.11
4	4	0.0958
40	40	0.452
41	41	0.518
42	42	0.366
43	43	0.685
44	44	0.861
45	45	0.0971
46	46	0.306
47	47	0.176
48	48	0.245
49	49	0.211
5	5	0.838
50	50	0.569
51	51	0.812
52	52	0.0428
53	53	0.697
54	54	0.908
55	55	0.47
56	56	0.99
57	57	0.0347
58	58	0.798
59	59	0.343
6	6	0.483
60	60	0.19
61	61	0.694
62	62	0.587
63	63	0.997
64	64	0.287
65	65	0.745
66	66	0.0449
67	67	0.753
68	68	0.567
69	69	0.852
7	7	0.861
70	70	0.0642
71	71	0.109
72	72	0.282
73	73	0.974
74	74	0.761
75	75	0.00565
76	76	0.0402
77	77	0.177
78	78	0.294
79	79	0.891
8	8	0.47
80	80	0.0178
81	81	0.541
82	82	0.689
83	83	0.284
84	84	0.862
85	85	0.343
86	86	0.639
87	87	0.741
88	88	0.944
89	89	0.734
9	9	0.165
90	90	0.0534
91	91	0.738
92	92	0.705
93	93	0.0492
94	94	0.192
95	95	0.286
96	96	0.755
97	97	0.593
98	98	0.155
99	99	0.855

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10625

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0010019 human lung - adult sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0002048 (lung)
0002100 (trunk)
0000479 (tissue)
0004119 (endoderm-derived structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0005178 (thoracic cavity element)
0005177 (trunk region element)
0000117 (respiratory tube)
0000171 (respiration organ)
0000464 (anatomical space)
0005181 (thoracic segment organ)
0010317 (germ layer / neural crest derived structure)
0000065 (respiratory tract)
0000170 (pair of lungs)
0001004 (respiratory system)
0002224 (thoracic cavity)
0000915 (thoracic segment of trunk)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010019 (human lung - adult sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0001041 (foregut)
UBERON:0008947 (respiratory primordium)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000077,UBERON:0000118,UBERON:0000119,UBERON:0000170,UBERON:0000171,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000915,UBERON:0000922,UBERON:0000923,UBERON:0000925,UBERON:0000926,UBERON:0001004,UBERON:0001007,UBERON:0001041,UBERON:0001048,UBERON:0001062,UBERON:0001555,UBERON:0002048,UBERON:0002050,UBERON:0002224,UBERON:0002532,UBERON:0003104,UBERON:0003258,UBERON:0004119,UBERON:0004120,UBERON:0004185,UBERON:0004921,UBERON:0005153,UBERON:0005178,UBERON:0005181,UBERON:0005423,UBERON:0005597,UBERON:0005911,UBERON:0007023,UBERON:0007026,UBERON:0008947,UBERON:0009142
+|DRA_sample_Accession=CAGE@SAMD00005303
+|HumanCAGEScanFiles=NCig10020;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/lung%252c%2520adult%252c%2520pool1.NCig10020.10019-101D1.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/lung%252c%2520adult%252c%2520pool1.NCig10020.10019-101D1.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/lung%252c%2520adult%252c%2520pool1.NCig10020.10019-101D1.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/lung%252c%2520adult%252c%2520pool1.NCig10020.10019-101D1.hg19.GCTATA.pairs.bed.gz
+|accession_numbers=CAGE;DRX008678;DRR009550;DRZ000975;DRZ002360;DRZ012325;DRZ013710
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0002048,UBERON:0002100,UBERON:0000479,UBERON:0004119,UBERON:0000466,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0005178,UBERON:0005177,UBERON:0000117,UBERON:0000171,UBERON:0000464,UBERON:0005181,UBERON:0010317,UBERON:0000065,UBERON:0000170,UBERON:0001004,UBERON:0002224,UBERON:0000915
 |ancestors_in_cell_lineage_facet=
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010019
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
+|expression_enrichment_score=chr4:57547454..57547469,-!p1@HOPX!2.97!935.35!HOPX;;chr6:134210243..134210257,+!p1@TCF21!2.53!341.61!TCF21;;chr11:47400078..47400106,-!p1@SPI1!2.16!144.38!SPI1;;chr16:86544113..86544145,+!p1@FOXF1!1.97!113.84!FOXF1;;chr8:10588010..10588030,-!p1@SOX7!1.97!93.33!SOX7;;chr19:46801639..46801699,+!p1@HIF3A!1.81!63.22!HIF3A;;chr1:201979703..201979721,+!p2@ELF3!1.80!62.36!ELF3;;chr20:62680984..62680999,-!p1@SOX18!1.77!75.29!SOX18;;chr11:34642612..34642646,+!p1@EHF!1.72!51.26!EHF;;chr21:39870339..39870443,-!p1@ERG!1.66!45.17!ERG;;chr2:68592406..68592424,+!p1@PLEK!1.64!43.14!PLEK;;chr3:128212033..128212051,-!p1@GATA2!1.62!40.90!GATA2;;chr17:59529743..59529798,+!p1@TBX4!1.61!40.05!TBX4;;chr2:46524537..46524553,+!p1@EPAS1!1.59!3492.06!EPAS1;;chr16:85932760..85932775,+!p1@IRF8!1.59!38.02!IRF8;;chr1:40105299..40105326,-!p1@HEYL!1.58!37.16!HEYL;;chr5:2751762..2751784,-!p1@IRX2!1.56!35.67!IRX2;;chr11:113930425..113930471,+!p1@ZBTB16!1.55!49.02!ZBTB16;;chr1:201979743..201979762,+!p1@ELF3!1.55!34.49!ELF3;;chr18:53068911..53068935,-!p4@TCF4!1.52!36.52!TCF4;;chr12:52445218..52445237,+!p1@NR4A1!1.51!375.89!NR4A1;;chr17:6926362..6926377,+!p1@BCL6B!1.50!30.54!BCL6B;;chr11:47400062..47400077,-!p2@SPI1!1.46!27.98!SPI1;;chr8:55370487..55370503,+!p1@SOX17!1.42!25.42!SOX17;;chr17:59477233..59477263,+!p1@TBX2!1.41!75.50!TBX2;;chr12:52437488..52437507,+!p2@NR4A1!1.40!24.35!NR4A1;;chr3:12330560..12330579,+!p1@PPARG!1.38!26.48!PPARG;;chr7:115670804..115670825,-!p1@TFEC!1.36!21.89!TFEC;;chr11:113930291..113930339,+!p2@ZBTB16!1.35!34.28!ZBTB16;;chr11:61520075..61520136,+!p1@C11orf9!1.34!43.89!C11orf9;;chr17:74137321..74137337,-!p1@FOXJ1!1.34!21.04!FOXJ1;;chr3:169381420..169381535,-!p1@MECOM!1.33!23.71!MECOM;;chr5:71803177..71803255,-!p1@ZNF366!1.32!19.97!ZNF366;;chrX:106960285..106960299,-!p1@TSC22D3!1.31!500.51!TSC22D3;;chr20:22564895..22564910,-!p1@FOXA2!1.30!18.79!FOXA2;;chr9:102584159..102584174,+!p2@NR4A3!1.29!33.10!NR4A3;;chr14:74256787..74256858,-!p6@C14orf43!1.29!18.58!C14orf43;;chr20:39317868..39317884,-!p1@MAFB!1.27!202.90!MAFB;;chr7:15726296..15726315,-!p1@MEOX2!1.25!16.98!MEOX2;;chr6:106546808..106546833,+!p3@PRDM1!1.24!20.72!PRDM1;;chr17:59477197..59477212,+!p2@TBX2!1.23!27.34!TBX2;;chr2:46524865..46524870,+!p9@EPAS1!1.23!18.58!EPAS1;;chr13:72441315..72441454,-!p1@DACH1!1.21!30.22!DACH1;;chr5:2751785..2751808,-!p2@IRX2!1.21!15.06!IRX2;;chr1:209979467..209979494,-!p1@IRF6!1.20!16.55!IRF6;;chr12:54778471..54778528,-!p1@ZNF385A!1.20!14.74!ZNF385A;;chr1:25256756..25256774,-!p1@RUNX3!1.18!26.27!RUNX3;;chr15:42749722..42749739,-!p2@ZFP106!1.17!24.67!ZFP106;;chr7:14028488..14028516,-!p2@ETV1!1.17!15.38!ETV1;;chr19:16435625..16435682,+!p1@KLF2!1.16!427.36!KLF2;;chr9:73028814..73028895,-!p1@KLF9!1.15!127.40!KLF9;;chr10:35484053..35484076,+!p1@CREM!1.15!32.57!CREM;;chr7:27183291..27183324,-!p1@HOXA5!1.15!13.03!HOXA5;;chr2:46524897..46524911,+!p2@EPAS1!1.14!35.77!EPAS1;;chr2:122042770..122042785,-!p1@TFCP2L1!1.14!12.92!TFCP2L1;;chr17:59477275..59477286,+!p3@TBX2!1.13!16.77!TBX2;;chr17:53342311..53342400,+!p1@HLF!1.13!14.20!HLF;;chr18:53177984..53178004,-!p17@TCF4!1.12!12.07!TCF4;;chr5:88178983..88179012,-!p1@MEF2C!1.10!90.77!MEF2C;;chr6:126240380..126240430,+!p2@NCOA7!1.10!29.90!NCOA7;;chr11:113930401..113930422,+!p3@ZBTB16!1.10!11.64!ZBTB16;;chr2:70142232..70142251,+!p1@MXD1!1.09!64.07!MXD1;;chr6:1389789..1389821,+!p1@FOXF2!1.09!15.59!FOXF2;;chr6:19837592..19837621,+!p1@ID4!1.08!67.17!ID4;;chr7:15726243..15726293,-!p2@MEOX2!1.08!11.11!MEOX2;;chr22:41763452..41763466,+!p2@TEF!1.08!11.00!TEF;;chr14:38064429..38064486,-!p1@FOXA1!1.08!10.89!FOXA1;;chr19:33793430..33793447,-!p1@CEBPA!1.07!45.28!CEBPA;;chr6:126240442..126240459,+!p4@NCOA7!1.07!13.88!NCOA7;;chrY:21906594..21906622,-!p1@KDM5D!1.07!10.68!KDM5D;;chr6:391743..391759,+!p1@IRF4!1.06!10.47!IRF4;;chr18:19749541..19749557,+!p1@GATA6!1.05!32.68!GATA6;;chr2:145277882..145277967,-!p3@ZEB2!1.04!17.51!ZEB2;;chr3:126076242..126076257,-!p1@KLF15!1.03!12.07!KLF15;;chr14:36988564..36988601,-!p7@NKX2-1!1.03!9.82!NKX2-1;;chr3:27763807..27763822,-!p1@EOMES!1.03!9.72!EOMES;;chr19:54041669..54041697,+!p2@ZNF331!1.03!9.61!ZNF331;;chr22:38597987..38598021,+!p2@MAFF!1.02!58.41!MAFF;;chr16:79634624..79634642,-!p1@MAF!1.02!37.91!MAF;;chr11:47279504..47279563,+!p1@NR1H3!1.02!21.57!NR1H3;;chr2:192015701..192015743,-!p1@STAT4!1.02!13.13!STAT4;;chr19:54058073..54058088,+!p1@ZNF331!1.02!9.40!ZNF331;;chr2:19558373..19558392,-!p1@OSR1!1.01!25.74!OSR1;;chr1:10754477..10754517,-!p1@CASZ1!1.01!15.70!CASZ1;;chr6:1312325..1312340,+!p1@FOXQ1!1.01!15.16!FOXQ1;;chr7:27183263..27183284,-!p2@HOXA5!1.01!9.18!HOXA5;;chr3:39195075..39195088,-!p1@CSRNP1!1.00!58.31!CSRNP1;;chr5:92918919..92918942,+!p1@NR2F1!1.00!41.01!NR2F1;;chr11:128392273..128392308,-!p2@ETS1!1.00!39.08!ETS1;;chr8:80679993..80680011,-!p1@HEY1!0.99!12.92!HEY1;;chr3:126076264..126076305,-!p2@KLF15!0.99!12.49!KLF15;;chr11:111249993..111250006,-!p1@POU2AF1!0.99!8.76!POU2AF1;;chr2:46524878..46524891,+!p3@EPAS1!0.98!15.27!EPAS1;;chr20:50159198..50159299,-!p1@NFATC2!0.98!12.49!NFATC2;;chr11:47399996..47400014,-!p4@SPI1!0.98!8.54!SPI1;;chr14:36989940..36989957,-!p2@NKX2-1!0.98!8.54!NKX2-1;;chr12:115122318..115122331,-!p2@TBX3!0.97!8.44!TBX3;;chr4:149363494..149363543,-!p1@NR3C2!0.97!8.44!NR3C2;;chr7:50344289..50344323,+!p1@IKZF1!0.97!8.33!IKZF1;;chr7:44143925..44143970,+!p1@AEBP1!0.96!184.74!AEBP1;;chr11:125034640..125034655,+!p1@PKNOX2!0.96!8.22!PKNOX2;;chr15:66994523..66994541,+!p5@SMAD6!0.96!8.22!SMAD6;;chr17:45810594..45810608,+!p1@TBX21!0.96!8.22!TBX21;;chr8:102504651..102504683,+!p1@GRHL2!0.96!8.12!GRHL2;;chr11:47400032..47400043,-!p5@SPI1!0.95!7.90!SPI1;;chr8:48650715..48650735,-!p1@CEBPD!0.94!1024.84!CEBPD;;chr1:170632285..170632309,+!p1@PRRX1!0.94!8.86!PRRX1;;chr2:61108695..61108753,+!p1@REL!0.93!53.61!REL;;chr1:151804244..151804310,-!p1@RORC!0.93!7.58!RORC;;chr18:53177899..53177918,-!p33@TCF4!0.93!7.58!TCF4;;chr14:35872453..35872485,-!p2@NFKBIA!0.92!18.79!NFKBIA;;chr7:50343634..50343717,+!p2@IKZF1!0.92!7.37!IKZF1;;chr17:80797886..80797906,-!p1@ZNF750!0.92!7.26!ZNF750;;chr2:145277640..145277771,-!p1@ZEB2!0.91!99.85!ZEB2;;chr13:41240737..41240787,-!p1@FOXO1!0.91!88.85!FOXO1;;chr18:52989031..52989079,-!p2@TCF4!0.91!17.30!TCF4;;chr3:168865194..168865245,-!p3@MECOM!0.91!9.29!MECOM;;chr2:180610565..180610578,-!p9@ZNF385B!0.91!7.05!ZNF385B;;chr15:60884706..60884743,-!p1@RORA!0.90!37.16!RORA;;chr6:126240356..126240379,+!p7@NCOA7!0.90!8.54!NCOA7;;chr16:79633894..79633954,-!p3@MAF!0.89!13.56!MAF;;chr10:31288398..31288455,-!p2@ZNF438!0.89!7.90!ZNF438;;chr9:110252035..110252057,-!p1@KLF4!0.88!112.55!KLF4;;chr12:26277956..26277980,-!p1@BHLHE41!0.88!24.88!BHLHE41;;chr16:54320617..54320643,-!p3@IRX3!0.88!8.54!IRX3;;chr17:37934365..37934387,-!p2@IKZF3!0.88!6.62!IKZF3;;chr4:149363475..149363492,-!p2@NR3C2!0.88!6.62!NR3C2;;chr13:73633131..73633149,+!p1@KLF5!0.87!72.51!KLF5;;chr2:97202480..97202499,+!p1@ARID5A!0.87!68.02!ARID5A;;chr3:71179699..71179744,-!p2@FOXP1!0.87!50.83!FOXP1;;chr19:45252008..45252024,+!p2@BCL3!0.87!22.00!BCL3;;chr18:19749386..19749404,+!p2@GATA6!0.87!9.40!GATA6;;chr13:72441506..72441562,-!p3@DACH1!0.87!6.41!DACH1;;chr14:36989427..36989442,-!p1@NKX2-1!0.87!6.41!NKX2-1;;chr1:212782094..212782109,+!p1@ATF3!0.86!182.39!ATF3;;chr15:96873984..96873999,+!p3@NR2F2!0.86!49.12!NR2F2;;chr2:157189180..157189290,-!p1@NR4A2!0.86!34.81!NR4A2;;chr18:19749517..19749531,+!p3@GATA6!0.86!11.64!GATA6;;chr7:14028743..14028799,-!p3@ETV1!0.86!8.01!ETV1;;chr2:231090433..231090469,+!p1@SP140!0.86!6.30!SP140;;chr2:238592039..238592054,+!p4@LRRFIP1!0.86!6.30!LRRFIP1;;chr3:63953435..63953499,+!p1@ATXN7!0.86!6.30!ATXN7;;chr12:52448338..52448401,+!p7@NR4A1!0.86!6.19!NR4A1;;chr10:51572408..51572454,+!p3@NCOA4!0.85!37.27!NCOA4;;chr17:38256822..38256851,-!p1@NR1D1!0.84!50.19!NR1D1;;chr3:39195037..39195069,-!p2@CSRNP1!0.84!39.30!CSRNP1;;chr11:46299199..46299233,+!p1@CREB3L1!0.84!32.25!CREB3L1;;chr9:117150254..117150271,-!p1@AKNA!0.84!16.87!AKNA;;chr3:114819124..114819200,-!p3@ZBTB20!0.84!14.31!ZBTB20;;chr1:158969752..158969780,+!p6@IFI16!0.84!10.79!IFI16;;chr19:45260775..45260838,+!p5@BCL3!0.84!7.90!BCL3;;chr1:170632959..170632987,+!p4@PRRX1!0.84!6.51!PRRX1;;chr17:36105042..36105060,-!p1@HNF1B!0.84!5.98!HNF1B;;chr19:16435705..16435726,+!p3@KLF2!0.84!5.98!KLF2;;chr11:128457446..128457461,-!p4@ETS1!0.84!5.87!ETS1;;chr7:14029283..14029311,-!p1@ETV1!0.83!33.21!ETV1;;chr15:66994663..66994680,+!p1@SMAD6!0.83!14.52!SMAD6;;chr16:79634595..79634620,-!p2@MAF!0.83!10.89!MAF;;chr2:180427261..180427297,-!p6@ZNF385B!0.83!5.77!ZNF385B;;chr3:128206762..128206781,-!p2@GATA2!0.82!37.70!GATA2;;chr14:35872962..35873025,-!p3@NFKBIA!0.82!15.06!NFKBIA;;chr18:53257001..53257015,-!p5@TCF4!0.82!10.14!TCF4;;chr2:85981107..85981120,+!p3@ATOH8!0.82!5.66!ATOH8;;chr14:75745523..75745537,+!p1@FOS!0.81!713.13!FOS;;chrX:131623044..131623089,-!p1@MBNL3!0.81!24.13!MBNL3;;chrX:106960221..106960236,-!p3@TSC22D3!0.81!15.91!TSC22D3;;chr16:54320646..54320672,-!p2@IRX3!0.81!8.54!IRX3;;chr12:54694758..54694805,-!p1@NFE2!0.81!6.73!NFE2;;chr12:24715376..24715432,-!p1@SOX5!0.80!6.83!SOX5;;chr11:128563948..128564003,+!p1@FLI1!0.79!67.28!FLI1;;chr1:204042233..204042249,+!p1@SOX13!0.79!35.56!SOX13;;chr9:73029219..73029289,-!p2@KLF9!0.79!16.87!KLF9;;chr17:38256799..38256815,-!p3@NR1D1!0.79!9.72!NR1D1;;chr5:92919100..92919135,+!p3@NR2F1!0.79!6.41!NR2F1;;chr13:72441074..72441172,-!p2@DACH1!0.79!5.23!DACH1;;chr11:34645791..34645836,+!p3@EHF!0.79!5.13!EHF;;chr14:35873947..35873965,-!p1@NFKBIA!0.78!348.23!NFKBIA;;chr5:88179017..88179046,-!p2@MEF2C!0.78!21.57!MEF2C;;chr6:106534192..106534224,+!p1@PRDM1!0.78!15.06!PRDM1;;chr8:93107451..93107468,-!p2@RUNX1T1!0.78!5.02!RUNX1T1;;chr13:41240717..41240735,-!p2@FOXO1!0.77!36.09!FOXO1;;chr3:187463179..187463201,-!p2@BCL6!0.77!21.78!BCL6;;chr8:106330656..106330684,+!p1@ZFPM2!0.77!13.78!ZFPM2;;chr6:106534230..106534254,+!p2@PRDM1!0.77!13.13!PRDM1;;chr1:170633348..170633399,+!p2@PRRX1!0.77!6.94!PRRX1;;chr14:75988771..75988826,+!p1@BATF!0.77!6.73!BATF;;chr5:122424918..1224249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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000065;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002048;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005153;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005157;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005181;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005911;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0008947
+|ffid_belonging_in_development=UBERON:0001041,UBERON:0008947,UBERON:0002532,UBERON:0006595,UBERON:0010316
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 34: / Line 43: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/lung%252c%2520adult%252c%2520pool1.CNhs10625.10019-101D1.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/lung%252c%2520adult%252c%2520pool1.CNhs10625.10019-101D1.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/lung%252c%2520adult%252c%2520pool1.CNhs10625.10019-101D1.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/lung%252c%2520adult%252c%2520pool1.CNhs10625.10019-101D1.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/lung%252c%2520adult%252c%2520pool1.CNhs10625.10019-101D1.hg38.nobarcode.ctss.bed.gz
 |id=FF:10019-101D1
-|is_a=EFO:0002091;;FF:0000004;;FF:0000210;;FF:0010019
+|is_a=EFO:0002091;;FF:0010019
+|is_obsolete=
+|library_id=CNhs10625
+|library_id_phase_based=2:CNhs10625
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10019
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10019
 |name=lung, adult, pool1
 |namespace=FANTOM5
@@ Line 41: / Line 62: @@
 |profile_cagescan=NCig10020,,,
 |profile_hcage=CNhs10625,LSID657,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
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 |rna_box=101
 |rna_catalog_number=Cat:AM6000 Lot:0910061 -10
@@ Line 56: / Line 80: @@
 |rna_weight_ug=10
 |sample_age=
+|sample_category=tissues
 |sample_cell_catalog=NA
 |sample_cell_line=
@@ Line 68: / Line 93: @@
 |sample_ethnicity=C
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.55042983295651e-287!GO:0005737;cytoplasm;8.28901305597408e-160!GO:0005515;protein binding;3.69232281115395e-109!GO:0044444;cytoplasmic part;3.13501425025321e-96!GO:0043226;organelle;3.36221521631332e-90!GO:0043229;intracellular organelle;8.12004563838616e-90!GO:0043227;membrane-bound organelle;1.30961931084157e-86!GO:0043231;intracellular membrane-bound organelle;1.85975774759921e-86!GO:0044422;organelle part;4.45265110907432e-61!GO:0044446;intracellular organelle part;1.04163299005936e-59!GO:0032991;macromolecular complex;5.08400506289733e-49!GO:0016043;cellular component organization and biogenesis;1.94816097781603e-42!GO:0019538;protein metabolic process;7.58804008963578e-41!GO:0030529;ribonucleoprotein complex;1.34040100281366e-36!GO:0033036;macromolecule localization;2.56815721367809e-36!GO:0044238;primary metabolic process;3.82197604505937e-36!GO:0044237;cellular metabolic process;2.38036661187831e-35!GO:0044260;cellular macromolecule metabolic process;3.88927622628817e-35!GO:0015031;protein transport;3.88927622628817e-35!GO:0045184;establishment of protein localization;1.42048038269178e-34!GO:0008104;protein localization;1.42048038269178e-34!GO:0044267;cellular protein metabolic process;2.16822672008669e-34!GO:0003723;RNA binding;8.61371765469103e-34!GO:0031090;organelle membrane;1.17945905755346e-33!GO:0043170;macromolecule metabolic process;4.9322579331196e-33!GO:0005829;cytosol;1.12020936273361e-29!GO:0043233;organelle lumen;2.53508006578124e-29!GO:0031974;membrane-enclosed lumen;2.53508006578124e-29!GO:0044428;nuclear part;4.63962703299137e-28!GO:0043234;protein complex;3.61060718976416e-27!GO:0006412;translation;1.84054061949063e-26!GO:0046907;intracellular transport;3.11175238914069e-25!GO:0006886;intracellular protein transport;7.9696200265861e-24!GO:0005739;mitochondrion;1.25998668894056e-23!GO:0065003;macromolecular complex assembly;1.86544718941339e-23!GO:0005840;ribosome;3.74520804156413e-23!GO:0005634;nucleus;3.23143285570072e-21!GO:0022607;cellular component assembly;7.31162324032996e-21!GO:0003735;structural constituent of ribosome;1.71225898165276e-20!GO:0009059;macromolecule biosynthetic process;1.97078668596508e-20!GO:0012501;programmed cell death;3.7923484280393e-20!GO:0006915;apoptosis;4.66814623404299e-20!GO:0031967;organelle envelope;4.95946643189352e-20!GO:0016071;mRNA metabolic process;7.08607836441885e-20!GO:0031975;envelope;7.08607836441885e-20!GO:0008134;transcription factor binding;1.03092099701223e-19!GO:0048770;pigment granule;1.47334059570448e-19!GO:0042470;melanosome;1.47334059570448e-19!GO:0009058;biosynthetic process;1.93597503883203e-19!GO:0008219;cell death;4.12759358731569e-19!GO:0016265;death;4.12759358731569e-19!GO:0016192;vesicle-mediated transport;5.3655070771524e-19!GO:0048523;negative regulation of cellular process;6.22778503172053e-19!GO:0033279;ribosomal subunit;6.43787732497623e-19!GO:0008380;RNA splicing;4.12177535060154e-18!GO:0051641;cellular localization;4.48853778467538e-18!GO:0051649;establishment of cellular localization;5.13906406829123e-18!GO:0031981;nuclear lumen;8.63512757726541e-18!GO:0044429;mitochondrial part;1.04737370484934e-17!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.21870092475723e-17!GO:0005783;endoplasmic reticulum;1.86922386928218e-17!GO:0005794;Golgi apparatus;2.89606464800574e-17!GO:0048519;negative regulation of biological process;2.89606464800574e-17!GO:0044249;cellular biosynthetic process;3.38210368459316e-17!GO:0012505;endomembrane system;1.93099768134302e-16!GO:0006397;mRNA processing;4.94752294624881e-16!GO:0006396;RNA processing;2.23684138716368e-15!GO:0044445;cytosolic part;2.56515302632151e-15!GO:0006996;organelle organization and biogenesis;1.48771294722196e-14!GO:0005773;vacuole;1.75521619832192e-14!GO:0006119;oxidative phosphorylation;6.0788927731068e-14!GO:0000323;lytic vacuole;1.36784422825126e-13!GO:0005764;lysosome;1.36784422825126e-13!GO:0000166;nucleotide binding;3.4125070280903e-13!GO:0005740;mitochondrial envelope;3.8591171064525e-13!GO:0030036;actin cytoskeleton organization and biogenesis;5.09401881746114e-13!GO:0005681;spliceosome;6.97472268151671e-13!GO:0031966;mitochondrial membrane;6.97472268151671e-13!GO:0042981;regulation of apoptosis;2.21545319534913e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;2.44865215238508e-12!GO:0003712;transcription cofactor activity;2.53760754370787e-12!GO:0043228;non-membrane-bound organelle;2.62411872572615e-12!GO:0043232;intracellular non-membrane-bound organelle;2.62411872572615e-12!GO:0043283;biopolymer metabolic process;3.21503798097698e-12!GO:0005654;nucleoplasm;3.2990896918652e-12!GO:0043285;biopolymer catabolic process;3.97182246835067e-12!GO:0043067;regulation of programmed cell death;4.13515425595036e-12!GO:0006950;response to stress;4.48717504050298e-12!GO:0044265;cellular macromolecule catabolic process;4.5690290306743e-12!GO:0019941;modification-dependent protein catabolic process;4.5690290306743e-12!GO:0043632;modification-dependent macromolecule catabolic process;4.5690290306743e-12!GO:0006511;ubiquitin-dependent protein catabolic process;5.40550649899535e-12!GO:0044257;cellular protein catabolic process;6.49459821836935e-12!GO:0019866;organelle inner membrane;6.49459821836935e-12!GO:0006793;phosphorus metabolic process;9.26224448109267e-12!GO:0006796;phosphate metabolic process;9.26224448109267e-12!GO:0006605;protein targeting;1.29158467830014e-11!GO:0044432;endoplasmic reticulum part;1.66391674551052e-11!GO:0048518;positive regulation of biological process;1.80732855337101e-11!GO:0022618;protein-RNA complex assembly;1.88908723310828e-11!GO:0031982;vesicle;2.12818373022804e-11!GO:0048522;positive regulation of cellular process;3.32103725908938e-11!GO:0043412;biopolymer modification;3.49858656276039e-11!GO:0015935;small ribosomal subunit;4.09683267621151e-11!GO:0006464;protein modification process;4.22770324288093e-11!GO:0030029;actin filament-based process;4.25048477791237e-11!GO:0030163;protein catabolic process;4.94094429201789e-11!GO:0006461;protein complex assembly;6.18525470999245e-11!GO:0005743;mitochondrial inner membrane;6.19402681339079e-11!GO:0006457;protein folding;6.20281382007346e-11!GO:0031410;cytoplasmic vesicle;9.04486602124335e-11!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.06382669007006e-10!GO:0044451;nucleoplasm part;1.1467794510608e-10!GO:0007243;protein kinase cascade;1.24195779647332e-10!GO:0048193;Golgi vesicle transport;1.41749254717835e-10!GO:0031988;membrane-bound vesicle;2.00336146201255e-10!GO:0050794;regulation of cellular process;2.1981236161011e-10!GO:0043687;post-translational protein modification;2.31067414286213e-10!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.31369699795863e-10!GO:0005768;endosome;2.31507504723153e-10!GO:0016564;transcription repressor activity;2.36728433336729e-10!GO:0010467;gene expression;3.64371935785409e-10!GO:0017076;purine nucleotide binding;3.69987881950988e-10!GO:0008092;cytoskeletal protein binding;3.77012976482556e-10!GO:0006366;transcription from RNA polymerase II promoter;5.30794045553622e-10!GO:0009057;macromolecule catabolic process;5.51285517207166e-10!GO:0005746;mitochondrial respiratory chain;5.76953063716315e-10!GO:0007242;intracellular signaling cascade;5.98115471732092e-10!GO:0016023;cytoplasmic membrane-bound vesicle;5.98115471732092e-10!GO:0016310;phosphorylation;5.98115471732092e-10!GO:0006913;nucleocytoplasmic transport;6.35402696147086e-10!GO:0032553;ribonucleotide binding;6.44789787835022e-10!GO:0032555;purine ribonucleotide binding;6.44789787835022e-10!GO:0050789;regulation of biological process;7.77378269159337e-10!GO:0044248;cellular catabolic process;7.79193855507463e-10!GO:0000502;proteasome complex (sensu Eukaryota);8.9505458205443e-10!GO:0019899;enzyme binding;9.19199025998121e-10!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.16085525496185e-09!GO:0051246;regulation of protein metabolic process;1.19060517127958e-09!GO:0016462;pyrophosphatase activity;1.47194409297709e-09!GO:0051169;nuclear transport;1.57533878934933e-09!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.6485014366604e-09!GO:0017111;nucleoside-triphosphatase activity;1.84592298771167e-09!GO:0016817;hydrolase activity, acting on acid anhydrides;2.38685016212778e-09!GO:0044455;mitochondrial membrane part;3.44568859666567e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.5369799033956e-09!GO:0005793;ER-Golgi intermediate compartment;3.76361089581674e-09!GO:0016874;ligase activity;4.57280205630661e-09!GO:0007264;small GTPase mediated signal transduction;5.20337605295422e-09!GO:0008135;translation factor activity, nucleic acid binding;5.78091788623489e-09!GO:0016044;membrane organization and biogenesis;6.23597766380787e-09!GO:0050136;NADH dehydrogenase (quinone) activity;6.62961918752132e-09!GO:0003954;NADH dehydrogenase activity;6.62961918752132e-09!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.62961918752132e-09!GO:0043069;negative regulation of programmed cell death;7.25901962544272e-09!GO:0008565;protein transporter activity;7.71737228796752e-09!GO:0015934;large ribosomal subunit;8.49147139423572e-09!GO:0031252;leading edge;1.05103576283288e-08!GO:0043066;negative regulation of apoptosis;1.05510512828154e-08!GO:0006512;ubiquitin cycle;1.52610739759681e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.85262590225989e-08!GO:0031324;negative regulation of cellular metabolic process;2.07763643443593e-08!GO:0065007;biological regulation;2.22873387921491e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.23042406573685e-08!GO:0006916;anti-apoptosis;2.71449243111842e-08!GO:0005789;endoplasmic reticulum membrane;2.77173479725088e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.96368735749261e-08!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.96368735749261e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.97837386060515e-08!GO:0051082;unfolded protein binding;3.77311483430255e-08!GO:0006446;regulation of translational initiation;4.15345314393112e-08!GO:0016604;nuclear body;4.57080648119245e-08!GO:0003714;transcription corepressor activity;5.06805797229287e-08!GO:0009892;negative regulation of metabolic process;5.91182122647836e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;5.95783762716788e-08!GO:0003743;translation initiation factor activity;7.44830231233596e-08!GO:0008639;small protein conjugating enzyme activity;7.72424010896381e-08!GO:0005635;nuclear envelope;9.64314676462889e-08!GO:0003779;actin binding;1.06067740373556e-07!GO:0004842;ubiquitin-protein ligase activity;1.24063315283936e-07!GO:0008361;regulation of cell size;1.74586909202147e-07!GO:0006413;translational initiation;2.164283984777e-07!GO:0016049;cell growth;2.83996233248759e-07!GO:0006897;endocytosis;3.10861271228333e-07!GO:0010324;membrane invagination;3.10861271228333e-07!GO:0051186;cofactor metabolic process;3.41324584314797e-07!GO:0030964;NADH dehydrogenase complex (quinone);3.46256023317564e-07!GO:0045271;respiratory chain complex I;3.46256023317564e-07!GO:0005747;mitochondrial respiratory chain complex I;3.46256023317564e-07!GO:0017038;protein import;3.60513127118495e-07!GO:0042775;organelle ATP synthesis coupled electron transport;3.73938171969537e-07!GO:0042773;ATP synthesis coupled electron transport;3.73938171969537e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.81070354574473e-07!GO:0016607;nuclear speck;3.94692628590956e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.35313256991918e-07!GO:0019787;small conjugating protein ligase activity;5.46806342389764e-07!GO:0031980;mitochondrial lumen;6.31184606606376e-07!GO:0005759;mitochondrial matrix;6.31184606606376e-07!GO:0009056;catabolic process;6.5102281877616e-07!GO:0019829;cation-transporting ATPase activity;6.5102281877616e-07!GO:0016481;negative regulation of transcription;6.86416172575201e-07!GO:0003924;GTPase activity;7.64461456505812e-07!GO:0005525;GTP binding;8.04494620443143e-07!GO:0051170;nuclear import;8.71934466538459e-07!GO:0009966;regulation of signal transduction;9.34346054876928e-07!GO:0006606;protein import into nucleus;9.63875022730829e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;1.12623359426242e-06!GO:0000375;RNA splicing, via transesterification reactions;1.12623359426242e-06!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.12623359426242e-06!GO:0001558;regulation of cell growth;1.85723422955414e-06!GO:0044431;Golgi apparatus part;2.16844748570216e-06!GO:0009055;electron carrier activity;2.18463517709138e-06!GO:0030554;adenyl nucleotide binding;2.18463517709138e-06!GO:0045786;negative regulation of progression through cell cycle;2.38668120834751e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.41786854231983e-06!GO:0031965;nuclear membrane;2.41790803957962e-06!GO:0005770;late endosome;2.47479192665394e-06!GO:0015986;ATP synthesis coupled proton transport;2.65063229736504e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.65063229736504e-06!GO:0048468;cell development;3.1156448966552e-06!GO:0032559;adenyl ribonucleotide binding;3.1890032512018e-06!GO:0005524;ATP binding;3.76015596085284e-06!GO:0030695;GTPase regulator activity;4.14688855027232e-06!GO:0003713;transcription coactivator activity;4.423347268807e-06!GO:0008283;cell proliferation;4.74705652173017e-06!GO:0007010;cytoskeleton organization and biogenesis;4.91545212976541e-06!GO:0065009;regulation of a molecular function;5.47893155068275e-06!GO:0051674;localization of cell;5.65688988235404e-06!GO:0006928;cell motility;5.65688988235404e-06!GO:0032561;guanyl ribonucleotide binding;7.27528216067664e-06!GO:0019001;guanyl nucleotide binding;7.27528216067664e-06!GO:0006732;coenzyme metabolic process;9.92485012548948e-06!GO:0042802;identical protein binding;1.06840936257752e-05!GO:0030120;vesicle coat;1.10334101516827e-05!GO:0030662;coated vesicle membrane;1.10334101516827e-05!GO:0048475;coated membrane;1.17368983404903e-05!GO:0030117;membrane coat;1.17368983404903e-05!GO:0008047;enzyme activator activity;1.29412035169856e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.29412035169856e-05!GO:0016881;acid-amino acid ligase activity;1.29412035169856e-05!GO:0005730;nucleolus;1.36669301767566e-05!GO:0016563;transcription activator activity;1.40646805064046e-05!GO:0045333;cellular respiration;1.49744039087287e-05!GO:0009060;aerobic respiration;2.02768825813616e-05!GO:0051789;response to protein stimulus;2.29065531522e-05!GO:0006986;response to unfolded protein;2.29065531522e-05!GO:0016469;proton-transporting two-sector ATPase complex;2.45656696910782e-05!GO:0043065;positive regulation of apoptosis;2.49983370522918e-05!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.51835727464559e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.04258035570926e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.04258035570926e-05!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.52087451353357e-05!GO:0009142;nucleoside triphosphate biosynthetic process;3.90674449239334e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.90674449239334e-05!GO:0009967;positive regulation of signal transduction;3.99257823067096e-05!GO:0043068;positive regulation of programmed cell death;4.21679169119807e-05!GO:0005096;GTPase activator activity;4.68497010170595e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.9142713285285e-05!GO:0009144;purine nucleoside triphosphate metabolic process;4.9142713285285e-05!GO:0005839;proteasome core complex (sensu Eukaryota);4.95631189823809e-05!GO:0045892;negative regulation of transcription, DNA-dependent;5.43739583813816e-05!GO:0006888;ER to Golgi vesicle-mediated transport;5.43779085702117e-05!GO:0040008;regulation of growth;5.53603984318223e-05!GO:0044440;endosomal part;5.85900468008927e-05!GO:0010008;endosome membrane;5.85900468008927e-05!GO:0051726;regulation of cell cycle;5.85900468008927e-05!GO:0009199;ribonucleoside triphosphate metabolic process;6.01610789531113e-05!GO:0009611;response to wounding;6.11930244458785e-05!GO:0000139;Golgi membrane;6.18808193676291e-05!GO:0006613;cotranslational protein targeting to membrane;6.38808404640078e-05!GO:0000074;regulation of progression through cell cycle;6.44525548144054e-05!GO:0006259;DNA metabolic process;6.9392039501761e-05!GO:0015078;hydrogen ion transmembrane transporter activity;7.35000756159076e-05!GO:0006754;ATP biosynthetic process;7.55565762544896e-05!GO:0006753;nucleoside phosphate metabolic process;7.55565762544896e-05!GO:0009150;purine ribonucleotide metabolic process;7.93278582115467e-05!GO:0009141;nucleoside triphosphate metabolic process;8.28670675930187e-05!GO:0007049;cell cycle;9.11210185841569e-05!GO:0005083;small GTPase regulator activity;9.77553883585917e-05!GO:0002376;immune system process;9.88300200887775e-05!GO:0044453;nuclear membrane part;0.00010045532439998!GO:0001726;ruffle;0.000101987833503412!GO:0033673;negative regulation of kinase activity;0.00010665594161584!GO:0006469;negative regulation of protein kinase activity;0.00010665594161584!GO:0005791;rough endoplasmic reticulum;0.000108838177528958!GO:0005761;mitochondrial ribosome;0.00010964436185434!GO:0000313;organellar ribosome;0.00010964436185434!GO:0006099;tricarboxylic acid cycle;0.000110530393342162!GO:0046356;acetyl-CoA catabolic process;0.000110530393342162!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000114095068350902!GO:0007265;Ras protein signal transduction;0.000115507604388216!GO:0030027;lamellipodium;0.00011658516757696!GO:0032446;protein modification by small protein conjugation;0.000128125505283066!GO:0005788;endoplasmic reticulum lumen;0.000128975759498498!GO:0001944;vasculature development;0.000133155448257319!GO:0006163;purine nucleotide metabolic process;0.000140556859238994!GO:0009259;ribonucleotide metabolic process;0.000142444306128714!GO:0009152;purine ribonucleotide biosynthetic process;0.000149054233908168!GO:0001568;blood vessel development;0.000149054233908168!GO:0030133;transport vesicle;0.000149054233908168!GO:0046034;ATP metabolic process;0.000150448181344799!GO:0016567;protein ubiquitination;0.000152814251744792!GO:0007167;enzyme linked receptor protein signaling pathway;0.000163020226568791!GO:0005798;Golgi-associated vesicle;0.000173252784109174!GO:0030100;regulation of endocytosis;0.000222963538393181!GO:0050790;regulation of catalytic activity;0.000249578787795297!GO:0016197;endosome transport;0.000257498335312993!GO:0006164;purine nucleotide biosynthetic process;0.000281808175166621!GO:0001666;response to hypoxia;0.000282907053939755!GO:0051348;negative regulation of transferase activity;0.000287911575810196!GO:0006325;establishment and/or maintenance of chromatin architecture;0.000304986512616845!GO:0050900;leukocyte migration;0.000329555342330251!GO:0004298;threonine endopeptidase activity;0.000330879602918692!GO:0048471;perinuclear region of cytoplasm;0.000370250221567843!GO:0045259;proton-transporting ATP synthase complex;0.000374690841547021!GO:0051187;cofactor catabolic process;0.000393030457615336!GO:0009260;ribonucleotide biosynthetic process;0.000401761387899542!GO:0016887;ATPase activity;0.000426248906370055!GO:0004860;protein kinase inhibitor activity;0.000538105874298577!GO:0019838;growth factor binding;0.000566836796089826!GO:0000245;spliceosome assembly;0.000566836796089826!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000566836796089826!GO:0045926;negative regulation of growth;0.000592175425840029!GO:0008286;insulin receptor signaling pathway;0.000601342261159917!GO:0045893;positive regulation of transcription, DNA-dependent;0.000605454310429829!GO:0006417;regulation of translation;0.000642670135092246!GO:0030041;actin filament polymerization;0.00064382790316285!GO:0006084;acetyl-CoA metabolic process;0.000647808561738188!GO:0005769;early endosome;0.000688747829748839!GO:0007169;transmembrane receptor protein tyrosine kinase signaling pathway;0.000703515575125485!GO:0005774;vacuolar membrane;0.000714297376201865!GO:0019904;protein domain specific binding;0.00072693306674444!GO:0045792;negative regulation of cell size;0.000744760179109484!GO:0006323;DNA packaging;0.000744760179109484!GO:0051427;hormone receptor binding;0.000749976535544445!GO:0006917;induction of apoptosis;0.000759581561308817!GO:0008154;actin polymerization and/or depolymerization;0.000777487676108798!GO:0009109;coenzyme catabolic process;0.000789313361722737!GO:0030308;negative regulation of cell growth;0.000792500515972429!GO:0005885;Arp2/3 protein complex;0.000818481686899355!GO:0051128;regulation of cellular component organization and biogenesis;0.000883113661504173!GO:0051270;regulation of cell motility;0.000952739079031225!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.000964677389157912!GO:0045941;positive regulation of transcription;0.000968008761269231!GO:0060090;molecular adaptor activity;0.000985178044566119!GO:0005643;nuclear pore;0.0010599397199622!GO:0030867;rough endoplasmic reticulum membrane;0.00110348420779671!GO:0009615;response to virus;0.00112977537666607!GO:0012502;induction of programmed cell death;0.00121046789464033!GO:0008654;phospholipid biosynthetic process;0.00121257838022018!GO:0006643;membrane lipid metabolic process;0.00124933512111766!GO:0035257;nuclear hormone receptor binding;0.00129815994748251!GO:0005100;Rho GTPase activator activity;0.00130520572269879!GO:0001525;angiogenesis;0.00136460795965019!GO:0006954;inflammatory response;0.00137220806671081!GO:0051338;regulation of transferase activity;0.00142176156994497!GO:0043566;structure-specific DNA binding;0.00142870535499118!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00146034272090506!GO:0006752;group transfer coenzyme metabolic process;0.00151027228141603!GO:0048514;blood vessel morphogenesis;0.00152518660980576!GO:0006612;protein targeting to membrane;0.00152930993604411!GO:0042623;ATPase activity, coupled;0.0015712264227506!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00160970008387037!GO:0033116;ER-Golgi intermediate compartment membrane;0.00163456078024827!GO:0005741;mitochondrial outer membrane;0.00169462106693431!GO:0006333;chromatin assembly or disassembly;0.0017155833307845!GO:0016301;kinase activity;0.00171980821571471!GO:0019210;kinase inhibitor activity;0.00187215563179512!GO:0016491;oxidoreductase activity;0.00187215563179512!GO:0000151;ubiquitin ligase complex;0.00188457221238523!GO:0030532;small nuclear ribonucleoprotein complex;0.00188457221238523!GO:0019843;rRNA binding;0.00202597631220054!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00204261647965859!GO:0043549;regulation of kinase activity;0.00209113016354885!GO:0009893;positive regulation of metabolic process;0.00211114577965041!GO:0046983;protein dimerization activity;0.00212797930497826!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.0022424615192648!GO:0050657;nucleic acid transport;0.0022424615192648!GO:0051236;establishment of RNA localization;0.0022424615192648!GO:0050658;RNA transport;0.0022424615192648!GO:0030155;regulation of cell adhesion;0.00229956745408293!GO:0000902;cell morphogenesis;0.00232116335463014!GO:0032989;cellular structure morphogenesis;0.00232116335463014!GO:0005765;lysosomal membrane;0.00234567758552135!GO:0042127;regulation of cell proliferation;0.00237996633444875!GO:0006403;RNA localization;0.00245129960680121!GO:0005905;coated pit;0.00248124742036572!GO:0040011;locomotion;0.00249779670822832!GO:0031968;organelle outer membrane;0.00251827896299!GO:0051188;cofactor biosynthetic process;0.00251827896299!GO:0051049;regulation of transport;0.00253397737692888!GO:0003697;single-stranded DNA binding;0.00278965508649503!GO:0008250;oligosaccharyl transferase complex;0.00283527024342057!GO:0043623;cellular protein complex assembly;0.00293804381156433!GO:0040012;regulation of locomotion;0.00293804381156433!GO:0045121;lipid raft;0.00296253048906568!GO:0006468;protein amino acid phosphorylation;0.00296658791535433!GO:0006693;prostaglandin metabolic process;0.00296658791535433!GO:0006692;prostanoid metabolic process;0.00296658791535433!GO:0046930;pore complex;0.0030327977888796!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00307283893955571!GO:0019867;outer membrane;0.00323463009243032!GO:0006607;NLS-bearing substrate import into nucleus;0.00329102977012794!GO:0044437;vacuolar part;0.00332847710069551!GO:0003724;RNA helicase activity;0.00343222733096033!GO:0032940;secretion by cell;0.00349106364451007!GO:0051336;regulation of hydrolase activity;0.00353736757323612!GO:0045859;regulation of protein kinase activity;0.00358380387777031!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00363168825036393!GO:0009607;response to biotic stimulus;0.00368371724240529!GO:0051920;peroxiredoxin activity;0.00372037203908768!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.00382753684945352!GO:0030118;clathrin coat;0.00404377140993618!GO:0015980;energy derivation by oxidation of organic compounds;0.00411038501645706!GO:0008026;ATP-dependent helicase activity;0.00429057995980513!GO:0016568;chromatin modification;0.0042908638113158!GO:0031902;late endosome membrane;0.00429620881225198!GO:0005667;transcription factor complex;0.00434659613776186!GO:0065004;protein-DNA complex assembly;0.0046628423948222!GO:0006979;response to oxidative stress;0.00469618939371194!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00470875219899856!GO:0005099;Ras GTPase activator activity;0.00476735871279556!GO:0004576;oligosaccharyl transferase activity;0.00488017936916131!GO:0030031;cell projection biogenesis;0.00490476048463239!GO:0007165;signal transduction;0.00491199490919156!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00502351135295971!GO:0005057;receptor signaling protein activity;0.00503378226986274!GO:0006091;generation of precursor metabolites and energy;0.00515732775351735!GO:0016791;phosphoric monoester hydrolase activity;0.00515943344890173!GO:0009889;regulation of biosynthetic process;0.00525575408222164!GO:0007005;mitochondrion organization and biogenesis;0.00536769127646733!GO:0001516;prostaglandin biosynthetic process;0.00540854210550179!GO:0046457;prostanoid biosynthetic process;0.00540854210550179!GO:0031326;regulation of cellular biosynthetic process;0.00570644888939195!GO:0007229;integrin-mediated signaling pathway;0.00586550041653527!GO:0005070;SH3/SH2 adaptor activity;0.00628981757397969!GO:0004386;helicase activity;0.00637696332724458!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00637696332724458!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00637696332724458!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00637696332724458!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00646595663979627!GO:0045045;secretory pathway;0.00663222855682625!GO:0007266;Rho protein signal transduction;0.00682642857750436!GO:0005912;adherens junction;0.00701125026394569!GO:0045454;cell redox homeostasis;0.00721082324690795!GO:0017166;vinculin binding;0.00743303481486317!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00743906209331976!GO:0007050;cell cycle arrest;0.00743906209331976!GO:0006644;phospholipid metabolic process;0.00760304802509491!GO:0016584;nucleosome positioning;0.00760304802509491!GO:0043021;ribonucleoprotein binding;0.00772071917254472!GO:0015630;microtubule cytoskeleton;0.0078826378645317!GO:0043407;negative regulation of MAP kinase activity;0.00794245580878387!GO:0030139;endocytic vesicle;0.00800520565356825!GO:0006402;mRNA catabolic process;0.00806615294302242!GO:0031589;cell-substrate adhesion;0.00806615294302242!GO:0009108;coenzyme biosynthetic process;0.00838781207337715!GO:0006650;glycerophospholipid metabolic process;0.00849800863152146!GO:0005048;signal sequence binding;0.00876478455895529!GO:0008632;apoptotic program;0.00890081571921145!GO:0000785;chromatin;0.00957896203073554!GO:0016787;hydrolase activity;0.00958814879085802!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00973079426476467!GO:0015629;actin cytoskeleton;0.0097477542002535!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00977552916822581!GO:0022402;cell cycle process;0.00990562473239166!GO:0065008;regulation of biological quality;0.00996971125259567!GO:0006892;post-Golgi vesicle-mediated transport;0.0100861151886409!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.0100861151886409!GO:0006401;RNA catabolic process;0.0102455139931611!GO:0002253;activation of immune response;0.0106216157675313!GO:0065002;intracellular protein transport across a membrane;0.0110053211609706!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0111147529570364!GO:0050828;regulation of liquid surface tension;0.0111228476108373!GO:0004674;protein serine/threonine kinase activity;0.0112969043902858!GO:0046456;icosanoid biosynthetic process;0.0116256614990801!GO:0051276;chromosome organization and biogenesis;0.0117969082998915!GO:0030658;transport vesicle membrane;0.0117969082998915!GO:0051168;nuclear export;0.0120862666634115!GO:0051101;regulation of DNA binding;0.0121645516158538!GO:0016126;sterol biosynthetic process;0.0128806805971921!GO:0005813;centrosome;0.0130512225572382!GO:0048500;signal recognition particle;0.0130512225572382!GO:0005938;cell cortex;0.0130512225572382!GO:0030127;COPII vesicle coat;0.0130512225572382!GO:0012507;ER to Golgi transport vesicle membrane;0.0130512225572382!GO:0008139;nuclear localization sequence binding;0.0130512225572382!GO:0048660;regulation of smooth muscle cell proliferation;0.0131638089099158!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0131841056415501!GO:0043086;negative regulation of catalytic activity;0.0135182333918828!GO:0030099;myeloid cell differentiation;0.0136993683356248!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0136993683356248!GO:0008234;cysteine-type peptidase activity;0.0137744639737419!GO:0045637;regulation of myeloid cell differentiation;0.0137744639737419!GO:0004721;phosphoprotein phosphatase activity;0.0138012073680383!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0138122006545127!GO:0042221;response to chemical stimulus;0.0138181206050211!GO:0008186;RNA-dependent ATPase activity;0.0142470123623794!GO:0043488;regulation of mRNA stability;0.0145556697367915!GO:0043487;regulation of RNA stability;0.0145556697367915!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0148144704079591!GO:0006611;protein export from nucleus;0.0148312358584206!GO:0051028;mRNA transport;0.0150780071017264!GO:0046822;regulation of nucleocytoplasmic transport;0.0152291702809187!GO:0051287;NAD binding;0.0152770035995539!GO:0008610;lipid biosynthetic process;0.0155019682762079!GO:0030134;ER to Golgi transport vesicle;0.0156650612534374!GO:0042613;MHC class II protein complex;0.0158375208565982!GO:0051087;chaperone binding;0.0159265247398329!GO:0048646;anatomical structure formation;0.0159286352342574!GO:0030674;protein binding, bridging;0.0161020670129566!GO:0048487;beta-tubulin binding;0.0161315043469418!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0163889287914477!GO:0015399;primary active transmembrane transporter activity;0.0163889287914477!GO:0030595;leukocyte chemotaxis;0.0164743766835044!GO:0016311;dephosphorylation;0.0165833388129367!GO:0001725;stress fiber;0.0166164971536246!GO:0032432;actin filament bundle;0.0166164971536246!GO:0030132;clathrin coat of coated pit;0.0166291672181382!GO:0030659;cytoplasmic vesicle membrane;0.016674382161688!GO:0008287;protein serine/threonine phosphatase complex;0.016674382161688!GO:0030334;regulation of cell migration;0.0167438269467102!GO:0051271;negative regulation of cell motility;0.0168896806461915!GO:0046467;membrane lipid biosynthetic process;0.0169893814624102!GO:0019221;cytokine and chemokine mediated signaling pathway;0.0170357611821048!GO:0022415;viral reproductive process;0.0171306117006032!GO:0007160;cell-matrix adhesion;0.0172270245732222!GO:0012506;vesicle membrane;0.0177813049301447!GO:0050811;GABA receptor binding;0.0177833874729636!GO:0017091;AU-rich element binding;0.0178702102535174!GO:0050779;RNA destabilization;0.0178702102535174!GO:0000289;poly(A) tail shortening;0.0178702102535174!GO:0051235;maintenance of localization;0.0187422825140915!GO:0018196;peptidyl-asparagine modification;0.0190549612391707!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0190549612391707!GO:0004197;cysteine-type endopeptidase activity;0.0191164106779278!GO:0030119;AP-type membrane coat adaptor complex;0.0192070027650572!GO:0007034;vacuolar transport;0.0193253336035487!GO:0003690;double-stranded DNA binding;0.0196892254959803!GO:0007040;lysosome organization and biogenesis;0.0201865208922785!GO:0018193;peptidyl-amino acid modification;0.0201865208922785!GO:0016859;cis-trans isomerase activity;0.0202860982171709!GO:0035035;histone acetyltransferase binding;0.0208783287043738!GO:0007041;lysosomal transport;0.020890182693955!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.0213504162128396!GO:0004812;aminoacyl-tRNA ligase activity;0.0213504162128396!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.0213504162128396!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0215596960037932!GO:0033043;regulation of organelle organization and biogenesis;0.0215596960037932!GO:0008637;apoptotic mitochondrial changes;0.0215847874730142!GO:0030131;clathrin adaptor complex;0.0218540928368992!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0221312336026368!GO:0045047;protein targeting to ER;0.0221312336026368!GO:0007162;negative regulation of cell adhesion;0.0222802423803862!GO:0055092;sterol homeostasis;0.0225576502480725!GO:0042632;cholesterol homeostasis;0.0225576502480725!GO:0003729;mRNA binding;0.0226358069305152!GO:0035258;steroid hormone receptor binding;0.022775280666432!GO:0004672;protein kinase activity;0.0227979202607471!GO:0003702;RNA polymerase II transcription factor activity;0.0228052203180254!GO:0044255;cellular lipid metabolic process;0.0229529801041548!GO:0006891;intra-Golgi vesicle-mediated transport;0.0231820243962445!GO:0005862;muscle thin filament tropomyosin;0.023227111115912!GO:0006334;nucleosome assembly;0.0232901083785211!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0234725761487818!GO:0051020;GTPase binding;0.0236963755469132!GO:0019207;kinase regulator activity;0.0240773044164248!GO:0043492;ATPase activity, coupled to movement of substances;0.0240773044164248!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.0240773044164248!GO:0006470;protein amino acid dephosphorylation;0.024291293253153!GO:0051252;regulation of RNA metabolic process;0.0243108828745877!GO:0043038;amino acid activation;0.0243854305081889!GO:0006418;tRNA aminoacylation for protein translation;0.0243854305081889!GO:0043039;tRNA aminoacylation;0.0243854305081889!GO:0017048;Rho GTPase binding;0.0243854305081889!GO:0030384;phosphoinositide metabolic process;0.0243854305081889!GO:0019887;protein kinase regulator activity;0.0244349346063775!GO:0030218;erythrocyte differentiation;0.0249205469245909!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0249205469245909!GO:0030660;Golgi-associated vesicle membrane;0.025035856596688!GO:0016070;RNA metabolic process;0.0252148072038519!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0252148072038519!GO:0048659;smooth muscle cell proliferation;0.0256630482813197!GO:0008629;induction of apoptosis by intracellular signals;0.025904098930618!GO:0009986;cell surface;0.0260854104991394!GO:0006633;fatty acid biosynthetic process;0.0261157480399299!GO:0006955;immune response;0.0261157480399299!GO:0031349;positive regulation of defense response;0.0261681226827471!GO:0050729;positive regulation of inflammatory response;0.0261681226827471!GO:0031267;small GTPase binding;0.0264593502923792!GO:0002764;immune response-regulating signal transduction;0.0272459423066873!GO:0030518;steroid hormone receptor signaling pathway;0.0277368987193727!GO:0008305;integrin complex;0.0281850836131774!GO:0031325;positive regulation of cellular metabolic process;0.0289033394934284!GO:0030663;COPI coated vesicle membrane;0.0289195644724044!GO:0030126;COPI vesicle coat;0.0289195644724044!GO:0006984;ER-nuclear signaling pathway;0.0294209984643652!GO:0006516;glycoprotein catabolic process;0.0294212397292213!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0294212397292213!GO:0051098;regulation of binding;0.0296913717422205!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0311395385345166!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0317499911849811!GO:0004004;ATP-dependent RNA helicase activity;0.0318370859457578!GO:0044433;cytoplasmic vesicle part;0.0322467307694768!GO:0006672;ceramide metabolic process;0.0322605147226434!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0330956634765566!GO:0032763;regulation of mast cell cytokine production;0.0331523131521743!GO:0032762;mast cell cytokine production;0.0331523131521743!GO:0008285;negative regulation of cell proliferation;0.0334182635725133!GO:0009605;response to external stimulus;0.0334182635725133!GO:0005869;dynactin complex;0.0334976024403082!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0337445193444592!GO:0009117;nucleotide metabolic process;0.0354139378029108!GO:0019959;interleukin-8 binding;0.0367335222617128!GO:0010037;response to carbon dioxide;0.0367335222617128!GO:0045646;regulation of erythrocyte differentiation;0.0370131199663172!GO:0004722;protein serine/threonine phosphatase activity;0.0385918553286712!GO:0031901;early endosome membrane;0.0391070644684256!GO:0030833;regulation of actin filament polymerization;0.0396616673401999!GO:0031072;heat shock protein binding;0.0396667505322504!GO:0055088;lipid homeostasis;0.0398794499084912!GO:0004177;aminopeptidase activity;0.0408626814124548!GO:0006509;membrane protein ectodomain proteolysis;0.0408626814124548!GO:0033619;membrane protein proteolysis;0.0408626814124548!GO:0019834;phospholipase A2 inhibitor activity;0.0409438413821619!GO:0006376;mRNA splice site selection;0.0409438413821619!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0409438413821619!GO:0005815;microtubule organizing center;0.0409438413821619!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0415202461185192!GO:0008333;endosome to lysosome transport;0.0415202461185192!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0417432158747555!GO:0030521;androgen receptor signaling pathway;0.042037119702239!GO:0030137;COPI-coated vesicle;0.0427543289388014!GO:0040013;negative regulation of locomotion;0.0436616552837256!GO:0004185;serine carboxypeptidase activity;0.0439158935047532!GO:0022603;regulation of anatomical structure morphogenesis;0.0439158935047532!GO:0008360;regulation of cell shape;0.0439158935047532!GO:0022604;regulation of cell morphogenesis;0.0439158935047532!GO:0031497;chromatin assembly;0.043995548312683!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.043995548312683!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.043995548312683!GO:0030097;hemopoiesis;0.0443425423127316!GO:0022890;inorganic cation transmembrane transporter activity;0.0443687735913726!GO:0043405;regulation of MAP kinase activity;0.0447641763596479!GO:0050662;coenzyme binding;0.0451694154147086!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0457160672646614!GO:0001887;selenium metabolic process;0.0457160672646614!GO:0031529;ruffle organization and biogenesis;0.0463939139723645!GO:0008147;structural constituent of bone;0.0463939139723645!GO:0004563;beta-N-acetylhexosaminidase activity;0.0464910991776985!GO:0030832;regulation of actin filament length;0.046812293680899!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.046812293680899!GO:0015002;heme-copper terminal oxidase activity;0.046812293680899!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.046812293680899!GO:0004129;cytochrome-c oxidase activity;0.046812293680899!GO:0016064;immunoglobulin mediated immune response;0.046812293680899!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.046812293680899!GO:0033367;protein localization in mast cell secretory granule;0.046812293680899!GO:0033365;protein localization in organelle;0.046812293680899!GO:0033371;T cell secretory granule organization and biogenesis;0.046812293680899!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.046812293680899!GO:0033375;protease localization in T cell secretory granule;0.046812293680899!GO:0042629;mast cell granule;0.046812293680899!GO:0033377;maintenance of protein localization in T cell secretory granule;0.046812293680899!GO:0033364;mast cell secretory granule organization and biogenesis;0.046812293680899!GO:0033380;granzyme B localization in T cell secretory granule;0.046812293680899!GO:0033379;maintenance of protease localization in T cell secretory granule;0.046812293680899!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.046812293680899!GO:0033368;protease localization in mast cell secretory granule;0.046812293680899!GO:0033366;protein localization in secretory granule;0.046812293680899!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.046812293680899!GO:0033374;protein localization in T cell secretory granule;0.046812293680899!GO:0007033;vacuole organization and biogenesis;0.0471780336911093!GO:0048002;antigen processing and presentation of peptide antigen;0.0481676883646959!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.048602176599276!GO:0032535;regulation of cellular component size;0.0491495319893554!GO:0051015;actin filament binding;0.0498007531495368
 |sample_id=10019
 |sample_note=
@@ Line 75: / Line 101: @@
 |sample_tissue=lung
 |top_motifs=HBP1_HMGB_SSRP1_UBTF:2.43874378994;SP1:2.38762220825;FOXA2:2.38316416028;FOX{D1,D2}:2.31703325094;EP300:2.27877076863;STAT2,4,6:2.24879169102;TLX2:2.21225730851;NFATC1..3:2.11689228227;TBP:2.04514480074;MAZ:2.0207806586;AR:2.01307183663;FOX{I1,J2}:1.98610572625;FOX{F1,F2,J1}:1.97267424197;T:1.82827012686;TFAP4:1.79765716879;FOXO1,3,4:1.75697702119;TFCP2:1.7284235757;TBX4,5:1.63554904515;RFX2..5_RFXANK_RFXAP:1.51713758655;TLX1..3_NFIC{dimer}:1.46970588395;ETS1,2:1.46825486643;HMX1:1.38253497082;SPZ1:1.36766488951;IRF1,2:1.35974074817;SRF:1.27534818581;NKX3-2:1.27323235278;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.24649145633;XCPE1{core}:1.22109775601;PATZ1:1.20100577608;POU2F1..3:1.19433880349;MYFfamily:1.1582235875;SNAI1..3:1.15640546762;IRF7:1.13975721125;ZNF148:1.08359664563;PRDM1:1.07162845255;MZF1:1.06463147149;ZEB1:1.04097779129;MTF1:1.02265016654;SMAD1..7,9:1.00792633245;MTE{core}:0.986894119971;GTF2I:0.961668698282;TFAP2{A,C}:0.932143889456;MED-1{core}:0.919847418877;ZNF238:0.906427550187;JUN:0.899971644615;GATA6:0.850704704738;TGIF1:0.842139589594;EGR1..3:0.823247628252;HOX{A6,A7,B6,B7}:0.780314217396;ATF2:0.776696551816;HSF1,2:0.771138567424;SPIB:0.763598864479;GZF1:0.757459590434;ZNF423:0.738153429706;RBPJ:0.723765892217;HAND1,2:0.719535464464;MEF2{A,B,C,D}:0.71773329311;FOXN1:0.708137842658;SOX5:0.689134467156;HNF1A:0.688482065336;STAT1,3:0.67477818232;IKZF2:0.672613468592;HIC1:0.653118106932;TEAD1:0.647771437963;NANOG:0.629946001014;PAX1,9:0.616805991026;ATF6:0.59955696063;TFAP2B:0.593186752543;GTF2A1,2:0.589862704013;RFX1:0.574974139082;PAX6:0.571625225393;SPI1:0.568814981565;RUNX1..3:0.567552008739;NR3C1:0.559911575509;IKZF1:0.549752310328;SREBF1,2:0.520288494774;NR1H4:0.501845107924;GATA4:0.473467660996;FOXL1:0.462218882665;ZFP161:0.431950695237;GCM1,2:0.415429095315;XBP1:0.413900927555;MYBL2:0.405174165542;MYOD1:0.399568827937;EBF1:0.372418253717;HNF4A_NR2F1,2:0.371126609682;DMAP1_NCOR{1,2}_SMARC:0.369167534939;POU5F1:0.366205129376;HES1:0.363597986083;NR6A1:0.354100925493;ELF1,2,4:0.342659202327;HLF:0.334437825586;MAFB:0.247579442785;CEBPA,B_DDIT3:0.245099451361;RREB1:0.221385547296;BPTF:0.216337686371;FOXP3:0.199414728128;GFI1B:0.191509810062;ATF4:0.175856258316;ESR1:0.15499237449;PAX5:0.148186124626;GLI1..3:0.141824820239;FOXQ1:0.136141798868;NKX2-3_NKX2-5:0.129001040138;LMO2:0.114420119464;REST:0.101250784899;ZIC1..3:0.0837786102212;NFKB1_REL_RELA:0.0804142701143;HMGA1,2:0.0471235257147;NFIL3:0.0470803539826;NKX2-1,4:0.0460959777539;DBP:0.0455169496791;SOX2:0.00440236141573;NHLH1,2:-0.00248084504343;BREu{core}:-0.0175312346638;RXR{A,B,G}:-0.0274703358593;ALX4:-0.0322763819488;CDC5L:-0.0652553255988;FOSL2:-0.0731625307167;NFIX:-0.0779530921116;CREB1:-0.0873429135743;CDX1,2,4:-0.118876464644;SOX{8,9,10}:-0.129697031739;STAT5{A,B}:-0.13448782582;ATF5_CREB3:-0.186522327526;KLF4:-0.198747957544;NFE2:-0.213148310706;FOXD3:-0.224447402728;NFY{A,B,C}:-0.280595983547;PBX1:-0.283810734075;bHLH_family:-0.347182813973;POU3F1..4:-0.362479127144;ESRRA:-0.398373551325;ALX1:-0.416328320862;HIF1A:-0.418648300055;NFE2L2:-0.419191817341;FOS_FOS{B,L1}_JUN{B,D}:-0.426520659857;TAL1_TCF{3,4,12}:-0.437848627563;NR5A1,2:-0.444059718529;NANOG{mouse}:-0.449919702959;PAX2:-0.458425102138;BACH2:-0.477106762031;LEF1_TCF7_TCF7L1,2:-0.481416987099;ADNP_IRX_SIX_ZHX:-0.487466160354;UFEwm:-0.491210133331;RXRA_VDR{dimer}:-0.546145191377;TP53:-0.548110154229;AHR_ARNT_ARNT2:-0.584866677513;NKX2-2,8:-0.590350072144;SOX17:-0.600671320403;AIRE:-0.600994080903;PITX1..3:-0.615870112233;GFI1:-0.620427276295;FOXP1:-0.634023852334;TFDP1:-0.646496636144;NFE2L1:-0.665504688756;ARID5B:-0.709443636567;NKX6-1,2:-0.766570163731;MYB:-0.769550236791;CUX2:-0.77592750073;PPARG:-0.786056263247;ZBTB6:-0.793138072558;NKX3-1:-0.807029828949;TEF:-0.816321494693;PRRX1,2:-0.846424686661;EN1,2:-0.864736890572;ZNF143:-0.90920068023;POU6F1:-0.983461422633;E2F1..5:-0.991474866741;ZNF384:-0.999897144133;ZBTB16:-1.00430600571;HOX{A5,B5}:-1.05478171311;NRF1:-1.07086374698;OCT4_SOX2{dimer}:-1.12757494104;POU1F1:-1.15587641152;TOPORS:-1.18779914762;RORA:-1.21661106843;CRX:-1.2252658293;PAX3,7:-1.28192574987;HOX{A4,D4}:-1.32871439646;LHX3,4:-1.33301132872;EVI1:-1.33800971695;PAX8:-1.33843878515;VSX1,2:-1.48645408534;PDX1:-1.50588398443;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.55720357568;FOXM1:-1.71314915635;HOXA9_MEIS1:-1.98206952981;YY1:-2.08911964113;ONECUT1,2:-2.13700354881;ELK1,4_GABP{A,B1}:-2.2691920441;PAX4:-2.40992928284
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10019-101D1;search_select_hide=table117:FF:10019-101D1
 }}

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FF:10019-101D1: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 12:14, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0