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{{f5samples
 
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000014,UBERON:0001003,UBERON:0002097,UBERON:0002199,UBERON:0007029,UBERON:0000483,UBERON:0000479,UBERON:0000064,UBERON:0004121,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000480,UBERON:0000923,UBERON:0002050,UBERON:0005423,UBERON:0000467,UBERON:0001062,UBERON:0000119,UBERON:0005291,UBERON:0003102,UBERON:0007376,UBERON:0006598,UBERON:0002532,UBERON:0000924,UBERON:0002416,UBERON:0006601,UBERON:0007383
+
|DRA_sample_Accession=CAGE@SAMD00005324
 +
|accession_numbers=CAGE;DRX008723;DRR009595;DRZ001020;DRZ002405;DRZ012370;DRZ013755
 +
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000014,UBERON:0001003,UBERON:0002097,UBERON:0002199,UBERON:0007029,UBERON:0000483,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0003102,UBERON:0007376,UBERON:0010371,UBERON:0010317,UBERON:0002416
 
|ancestors_in_cell_lineage_facet=
 
|ancestors_in_cell_lineage_facet=
 
|ancestors_in_disease_facet=
 
|ancestors_in_disease_facet=
 +
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000999,FF:0000004,FF:0010065
 
|comment=
 
|comment=
 
|created_by=
 
|created_by=
 
|creation_date=
 
|creation_date=
 +
|data_phase=2
 +
|datafreeze_phase=2
 
|def=
 
|def=
 
|expression_enrichment_score=chr4:57547454..57547469,-!p1@HOPX!2.24!172.43!HOPX;;chr17:80797886..80797906,-!p1@ZNF750!1.95!88.40!ZNF750;;chr3:189507432..189507459,+!p1@TP63!1.84!67.51!TP63;;chr3:12330560..12330579,+!p1@PPARG!1.83!76.26!PPARG;;chr19:46801639..46801699,+!p1@HIF3A!1.78!59.74!HIF3A;;chr7:19157248..19157268,-!p1@TWIST1!1.73!141.34!TWIST1;;chr19:33793430..33793447,-!p1@CEBPA!1.71!201.57!CEBPA;;chr15:42749722..42749739,-!p2@ZFP106!1.70!85.49!ZFP106;;chr11:34642612..34642646,+!p1@EHF!1.62!40.80!EHF;;chr20:55204351..55204377,+!p1@TFAP2C!1.60!48.57!TFAP2C;;chr17:48072574..48072597,-!p1@DLX3!1.59!37.89!DLX3;;chr13:72441315..72441454,-!p1@DACH1!1.58!71.89!DACH1;;chr21:39870339..39870443,-!p1@ERG!1.57!35.94!ERG;;chr16:79634624..79634642,-!p1@MAF!1.56!132.60!MAF;;chr5:158526917..158526932,-!p1@EBF1!1.55!84.03!EBF1;;chr8:10588010..10588030,-!p1@SOX7!1.54!34.00!SOX7;;chr2:19558373..19558392,-!p1@OSR1!1.53!88.40!OSR1;;chr1:209979467..209979494,-!p1@IRF6!1.53!36.43!IRF6;;chr19:46800289..46800327,+!p2@HIF3A!1.53!33.03!HIF3A;;chr2:119605214..119605230,-!p1@EN1!1.53!32.54!EN1;;chr15:57511609..57511651,+!p2@TCF12!1.51!51.97!TCF12;;chr1:170632285..170632309,+!p1@PRRX1!1.50!34.49!PRRX1;;chr20:50179368..50179392,-!p2@NFATC2!1.48!37.40!NFATC2;;chr10:131762504..131762555,-!p1@EBF3!1.48!29.14!EBF3;;chr8:25902876..25902936,-!p1@EBF2!1.48!29.14!EBF2;;chr11:129245526..129245553,+!p1@BARX2!1.46!28.17!BARX2;;chr7:15726296..15726315,-!p1@MEOX2!1.45!27.20!MEOX2;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.45!27.20!ZBED1;;chr1:40105299..40105326,-!p1@HEYL!1.44!26.23!HEYL;;chr15:101069113..101069169,-!p1@CERS3!1.44!26.23!CERS3;;chr18:53068911..53068935,-!p4@TCF4!1.43!29.14!TCF4;;chr5:2751762..2751784,-!p1@IRX2!1.41!24.77!IRX2;;chr7:73038839..73038862,-!p1@MLXIPL!1.41!24.77!MLXIPL;;chr12:52437488..52437507,+!p2@NR4A1!1.41!24.77!NR4A1;;chr2:145277882..145277967,-!p3@ZEB2!1.40!40.80!ZEB2;;chr22:38380543..38380569,-!p1@SOX10!1.40!24.29!SOX10;;chr16:85932760..85932775,+!p1@IRF8!1.40!24.29!IRF8;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.39!23.80!HOXC5;;chr11:120110863..120110908,+!p2@POU2F3!1.39!23.31!POU2F3;;chr1:170633348..170633399,+!p2@PRRX1!1.38!31.09!PRRX1;;chr20:62680984..62680999,-!p1@SOX18!1.36!28.66!SOX18;;chr7:27205136..27205164,-!p1@HOXA9!1.36!21.86!HOXA9;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.35!21.37!PEG3;;chr8:99956662..99956684,+!p1@OSR2!1.34!31.57!OSR2;;chr8:102504651..102504683,+!p1@GRHL2!1.33!20.40!GRHL2;;chr2:122042770..122042785,-!p1@TFCP2L1!1.33!20.40!TFCP2L1;;chr2:145277640..145277771,-!p1@ZEB2!1.30!247.23!ZEB2;;chr16:79634595..79634620,-!p2@MAF!1.30!34.49!MAF;;chr2:10091815..10091864,+!p1@GRHL1!1.30!25.26!GRHL1;;chr2:60780753..60780800,-!p1@BCL11A!1.29!89.37!BCL11A;;chr7:27192185..27192209,-!p1@HOXA3!1.27!17.49!HOXA3;;chr10:8096631..8096660,+!p1@GATA3!1.26!20.89!GATA3;;chr5:158527104..158527135,-!p4@EBF1!1.26!17.00!EBF1;;chr10:64576105..64576133,-!p1@EGR2!1.25!34.00!EGR2;;chr6:10412600..10412637,-!p1@TFAP2A!1.25!27.69!TFAP2A;;chr1:214161272..214161322,+!p1@PROX1!1.25!23.80!PROX1;;chr2:239756671..239756732,+!p1@TWIST2!1.24!52.46!TWIST2;;chr6:144329384..144329405,-!p1@PLAGL1!1.23!182.63!PLAGL1;;chr16:54320675..54320715,-!p1@IRX3!1.23!34.00!IRX3;;chr6:10415276..10415341,-!p2@TFAP2A!1.23!19.43!TFAP2A;;chr1:203055129..203055147,-!p1@MYOG!1.23!16.03!MYOG;;chr6:85474299..85474324,-!p1@TBX18!1.22!27.69!TBX18;;chr6:19837592..19837621,+!p1@ID4!1.20!90.34!ID4;;chr11:46299199..46299233,+!p1@CREB3L1!1.19!73.83!CREB3L1;;chr6:144289132..144289134,-!p3@PLAGL1!1.19!34.00!PLAGL1;;chr8:55370487..55370503,+!p1@SOX17!1.19!14.57!SOX17;;chr5:88178983..88179012,-!p1@MEF2C!1.18!107.83!MEF2C;;chr3:12329397..12329433,+!p2@PPARG!1.18!32.06!PPARG;;chr17:53342311..53342400,+!p1@HLF!1.18!16.03!HLF;;chr3:128212033..128212051,-!p1@GATA2!1.18!14.09!GATA2;;chr11:34535297..34535317,-!p1@ELF5!1.18!14.09!ELF5;;chr7:15726243..15726293,-!p2@MEOX2!1.18!14.09!MEOX2;;chr7:96654133..96654150,-!p1@DLX5!1.18!14.09!DLX5;;chr17:80797863..80797874,-!p2@ZNF750!1.16!13.60!ZNF750;;chr18:45663490..45663528,-!p2@ZBTB7C!1.15!13.11!ZBTB7C;;chr9:1050331..1050363,+!p1@DMRT2!1.15!13.11!DMRT2;;chr2:5832508..5832524,+!p1@SOX11!1.15!13.11!SOX11;;chr1:119530493..119530572,-!p1@TBX15!1.15!13.11!TBX15;;chr1:24645832..24645853,+!p1@GRHL3!1.15!13.11!GRHL3;;chr1:61548225..61548299,+!p1@NFIA!1.14!166.60!NFIA;;chr3:21792585..21792625,-!p2@ZNF385D!1.13!14.09!ZNF385D;;chr19:2867325..2867348,+!p1@ZNF556!1.13!12.63!ZNF556;;chr8:93115274..93115323,-!p4@RUNX1T1!1.12!12.14!RUNX1T1;;chr6:1312325..1312340,+!p1@FOXQ1!1.11!19.43!FOXQ1;;chr12:52445218..52445237,+!p1@NR4A1!1.10!146.68!NR4A1;;chr5:137804484..137804498,+!p2@EGR1!1.10!46.63!EGR1;;chr5:172662197..172662216,-!p1@NKX2-5!1.10!11.66!NKX2-5;;chr8:93074803..93074845,-!p1@RUNX1T1!1.10!11.66!RUNX1T1;;chr1:170633262..170633285,+!p3@PRRX1!1.09!13.11!PRRX1;;chr2:223163706..223163730,-!p1@PAX3!1.09!11.17!PAX3;;chr10:70320074..70320106,+!p1@TET1!1.08!22.34!TET1;;chr16:54320617..54320643,-!p3@IRX3!1.08!14.09!IRX3;;chr1:10754477..10754517,-!p1@CASZ1!1.07!17.97!CASZ1;;chr1:10856639..10856662,-!p2@CASZ1!1.07!10.69!CASZ1;;chr5:3595961..3595975,+!p3@IRX1!1.07!10.69!IRX1;;chr6:34524093..34524135,-!p1@SPDEF!1.07!10.69!SPDEF;;chr6:50786591..50786614,+!p1@TFAP2B!1.07!10.69!TFAP2B;;chr9:14314566..14314618,-!p1@NFIB!1.06!125.80!NFIB;;chr3:69788576..69788648,+!p1@MITF!1.05!55.37!MITF;;chr3:114819124..114819200,-!p3@ZBTB20!1.05!23.80!ZBTB20;;chr1:61548374..61548415,+!p4@NFIA!1.05!19.43!NFIA;;chr10:8096772..8096787,+!p2@GATA3!1.05!12.14!GATA3;;chr11:125034640..125034655,+!p1@PKNOX2!1.05!10.20!PKNOX2;;chr11:65554528..65554546,+!p1@OVOL1!1.05!10.20!OVOL1;;chr1:201979743..201979762,+!p1@ELF3!1.05!10.20!ELF3;;chr17:46682321..46682362,-!p1@HOXB6!1.05!10.20!HOXB6;;chr2:177001290..177001315,+!p1@HOXD3!1.05!10.20!HOXD3;;chr9:126774018..126774055,+!p1@LHX2!1.05!10.20!LHX2;;chr8:106330656..106330684,+!p1@ZFPM2!1.04!26.23!ZFPM2;;chr18:6414884..6414942,-!p1@L3MBTL4!1.04!12.63!L3MBTL4;;chr1:23696308..23696339,-!p2@ZNF436!1.03!20.89!ZNF436;;chr17:41739283..41739297,-!p1@MEOX1!1.03!9.71!MEOX1;;chr18:53089538..53089578,-!p14@TCF4!1.03!9.71!TCF4;;chr9:132427883..132427951,+!p2@PRRX2!1.03!9.71!PRRX2;;chr5:3595934..3595957,+!p2@IRX1!1.03!9.71!IRX1;;chr2:60781201..60781258,-!p3@BCL11A!1.03!9.71!BCL11A;;chr14:75745523..75745537,+!p1@FOS!1.02!1155.99!FOS;;chr18:52989031..52989079,-!p2@TCF4!1.02!22.83!TCF4;;chr9:14314522..14314556,-!p3@NFIB!1.01!21.86!NFIB;;chr1:164528616..164528660,+!p5@PBX1!1.01!19.43!PBX1;;chr20:30433396..30433414,-!p1@FOXS1!1.01!9.23!FOXS1;;chr8:93115445..93115462,-!p7@RUNX1T1!1.01!9.23!RUNX1T1;;chr7:28725740..28725778,+!p1@CREB5!1.00!81.60!CREB5;;chr7:28448965..28448994,+!p2@CREB5!1.00!32.54!CREB5;;chr1:61547894..61547968,+!p2@NFIA!1.00!26.71!NFIA;;chr7:42276787..42276815,-!p1@GLI3!1.00!24.77!GLI3;;chr12:53625966..53626012,-!p2@RARG!1.00!24.29!RARG;;chr12:54785074..54785122,-!p2@ZNF385A!1.00!14.09!ZNF385A;;chr17:17726907..17726958,-!p2@SREBF1!0.99!55.86!SREBF1;;chr9:14314131..14314147,-!p2@NFIB!0.99!49.54!NFIB;;chr17:7493405..7493419,-!p1@SOX15!0.99!8.74!SOX15;;chr3:21792682..21792720,-!p1@ZNF385D!0.99!8.74!ZNF385D;;chr10:119302508..119302559,+!p5@EMX2!0.99!8.74!EMX2;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.99!8.74!HOXC5;;chr13:72441074..72441172,-!p2@DACH1!0.99!8.74!DACH1;;chr1:201979703..201979721,+!p2@ELF3!0.99!8.74!ELF3;;chr18:22932080..22932170,-!p1@ZNF521!0.98!37.40!ZNF521;;chr3:12329358..12329393,+!p3@PPARG!0.98!21.37!PPARG;;chr19:45971246..45971265,+!p1@FOSB!0.97!161.26!FOSB;;chr17:70117153..70117174,+!p1@SOX9!0.97!88.40!SOX9;;chr15:60884706..60884743,-!p1@RORA!0.97!44.20!RORA;;chrX:84498989..84499003,+!p1@ZNF711!0.97!11.66!ZNF711;;chr2:176981499..176981522,+!p2@HOXD10!0.97!8.26!HOXD10;;chr2:68592406..68592424,+!p1@PLEK!0.97!8.26!PLEK;;chr15:57210961..57211012,+!p3@TCF12!0.96!26.71!TCF12;;chr12:96588368..96588394,+!p3@ELK3!0.96!22.34!ELK3;;chr13:73633131..73633149,+!p1@KLF5!0.95!87.91!KLF5;;chr1:61548069..61548102,+!p3@NFIA!0.94!19.43!NFIA;;chr1:170632583..170632590,+!p26@PRRX1!0.94!7.77!PRRX1;;chr1:209979411..209979433,-!p2@IRF6!0.94!7.77!IRF6;;chr22:19748231..19748317,+!p1@TBX1!0.94!7.77!TBX1;;chr4:111558135..111558198,-!p2@PITX2!0.94!7.77!PITX2;;chr9:126773880..126773895,+!p2@LHX2!0.94!7.77!LHX2;;chr11:44331576..44331650,-!p1@ALX4!0.94!7.77!ALX4;;chr12:54422217..54422239,+!p3@HOXC6!0.94!7.77!HOXC6;;chr5:124082322..124082364,-!p1@ZNF608!0.93!19.91!ZNF608;;chr19:13134772..13134822,+!p2@NFIX!0.93!11.17!NFIX;;chr1:61924375..61924380,+!p6@NFIA!0.93!10.69!NFIA;;chr11:47279504..47279563,+!p1@NR1H3!0.92!17.00!NR1H3;;chr16:54964740..54964789,+!p1@IRX5!0.92!10.69!IRX5;;chr10:8095593..8095625,+!p3@GATA3!0.92!8.74!GATA3;;chr14:75747296..75747329,+!p4@FOS!0.92!7.29!FOS;;chr2:176994408..176994492,+!p1@HOXD8!0.92!7.29!HOXD8;;chr4:174451370..174451387,-!p1@HAND2!0.92!7.29!HAND2;;chr6:10419768..10419819,-!p6@TFAP2A!0.92!7.29!TFAP2A;;chr8:93107451..93107468,-!p2@RUNX1T1!0.92!7.29!RUNX1T1;;chr9:14314946..14314983,-!p8@NFIB!0.92!7.29!NFIB;;chr9:14313641..14313652,-!p13@NFIB!0.92!7.29!NFIB;;chr6:21593973..21593988,+!p1@SOX4!0.91!267.63!SOX4;;chr6:21597765..21597779,+!p2@SOX4!0.91!60.23!SOX4;;chr2:60780607..60780624,-!p2@BCL11A!0.91!22.83!BCL11A;;chr8:22550982..22550999,-!p1@EGR3!0.91!20.89!EGR3;;chr6:91006518..91006570,-!p1@BACH2!0.91!17.00!BACH2;;chr7:44143925..44143970,+!p1@AEBP1!0.90!161.26!AEBP1;;chr6:106534192..106534224,+!p1@PRDM1!0.90!20.40!PRDM1;;chr18:77155922..77155939,+!p1@NFATC1!0.90!19.91!NFATC1;;chr3:42947600..42947680,+!p1@ZNF662!0.90!10.20!ZNF662;;chr3:169381420..169381535,-!p1@MECOM!0.90!8.26!MECOM;;chr10:114710098..114710130,+!p2@TCF7L2!0.89!53.43!TCF7L2;;chr7:44143978..44143989,+!p2@AEBP1!0.89!12.63!AEBP1;;chr5:158526459..158526481,-!p2@EBF1!0.89!9.23!EBF1;;chr12:26277817..26277863,-!p2@BHLHE41!0.89!9.23!BHLHE41;;chr12:54785054..54785072,-!p4@ZNF385A!0.89!7.77!ZNF385A;;chr11:129245736..129245758,+!p2@BARX2!0.89!6.80!BARX2;;chr12:54410948..54410992,+!p3@HOXC5!0.89!6.80!HOXC5;;chr5:2751785..2751808,-!p2@IRX2!0.89!6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.42!8.26!ZFP14;;chr17:59477233..59477263,+!p1@TBX2!0.42!6.80!TBX2;;chr3:150126706..150126754,+!p5@TSC22D2!0.42!6.80!TSC22D2;;chr12:46123050..46123129,+!p2@ARID2!0.42!6.80!ARID2;;chr16:4323015..4323067,-!p2@TFAP4!0.42!5.83!TFAP4;;chr8:123794102..123794160,+!p3@ZHX2!0.42!5.83!ZHX2;;chr10:35484053..35484076,+!p1@CREM!0.42!5.34!CREM;;chr19:9879350..9879419,-!p2@ZNF846!0.42!4.37!ZNF846;;chr19:58666441..58666478,-!p2@ZNF329!0.42!3.40!ZNF329;;chr1:35656352..35656383,-!p7@SFPQ!0.42!3.40!SFPQ;;chr10:114710060..114710069,+!p5@TCF7L2!0.42!3.40!TCF7L2;;chr10:114710553..114710585,+!p6@TCF7L2!0.42!3.40!TCF7L2;;chr19:18391708..18391737,-!p7@JUND!0.42!2.91!JUND;;chr9:110251836..110251887,-!p4@KLF4!0.42!2.43!KLF4;;chr20:48809000..48809053,+!p12@CEBPB!0.42!2.43!CEBPB;;chr2:208031943..208031978,-!p5@KLF7!0.42!2.43!KLF7;;chr2:46612334..46612349,+!p6@EPAS1!0.42!2.43!EPAS1;;chr3:14989138..14989151,+!p6@NR2C2!0.42!1.94!NR2C2;;chr10:38146482..38146507,-!p4@ZNF248!0.42!1.94!ZNF248;;chr11:46299186..46299195,+!p3@CREB3L1!0.42!1.94!CREB3L1;;chr13:46626847..46626899,-!p1@ZC3H13!0.41!72.86!ZC3H13;;chr6:35464817..35464894,-!p1@TEAD3!0.41!35.46!TEAD3;;chr6:126112074..126112144,+!p1@NCOA7!0.41!30.60!NCOA7;;chr19:58609577..58609628,-!p1@ZSCAN18!0.41!29.14!ZSCAN18;;chr21:27107259..27107299,+!p1@GABPA!0.41!13.11!GABPA;;chr9:95640300..95640345,-!p1@ZNF484!0.41!12.63!ZNF484;;chr19:12267524..12267564,-!p1@ZNF20,p1@ZNF625!0.41!10.69!ZNF20;;chr10:21823243..21823290,+!p2@MLLT10!0.41!9.71!MLLT10;;chr19:37407212..37407280,+!p1@ZNF568!0.41!8.74!ZNF568;;chr19:44331493..44331552,+!p1@ZNF283!0.41!7.77!ZNF283;;chr6:108881012..108881034,+!p3@FOXO3!0.41!7.77!FOXO3;;chr14:89883412..89883478,-!p3@FOXN3!0.41!6.80!FOXN3;;chrX:106960221..106960236,-!p3@TSC22D3!0.41!5.83!TSC22D3;;chr19:20150301..20150321,-!p1@ZNF682!0.41!5.34!ZNF682;;chr2:148778973..148779035,+!p3@MBD5!0.41!5.34!MBD5;;chr15:66994561..66994597,+!p2@SMAD6!0.41!4.86!SMAD6;;chr19:53970970..53971021,+!p1@ZNF813!0.41!4.86!ZNF813;;chr19:58951496..58951539,-!p1@ZNF132!0.41!4.86!ZNF132;;chr20:3388579..3388619,-!p3@C20orf194!0.41!4.86!C20orf194;;chr10:76585205..76585251,+!p3@KAT6B!0.41!4.37!KAT6B;;chr15:41913412..41913456,+!p3@MGA!0.41!4.37!MGA;;chr4:146402843..146402864,+!p3@SMAD1!0.41!3.89!SMAD1;;chr19:21324863..21324874,+!p2@ZNF431!0.41!3.40!ZNF431;;chr15:42783258..42783270,-!p4@ZFP106!0.41!2.43!ZFP106;;chr18:53257068..53257086,-!p12@TCF4!0.41!2.43!TCF4;;chr20:46130727..46130734,+!p4@NCOA3!0.41!2.43!NCOA3;;chr10:114710083..114710092,+!p8@TCF7L2!0.41!2.43!TCF7L2;;chr6:32095523..32095564,-!p2@ATF6B!0.41!2.43!ATF6B;;chr6:10412392..10412409,-!p4@TFAP2A!0.41!1.94!TFAP2A;;chr6:135502408..135502459,+!p2@MYB!0.41!1.94!MYB;;chr15:35280863..35280908,-!p3@ZNF770!0.41!1.94!ZNF770;;chr2:101591314..101591333,+!p2@NPAS2!0.41!1.94!NPAS2;;chr2:43453734..43453751,-!p1@ZFP36L2!0.40!245.28!ZFP36L2;;chr7:74072021..74072119,+!p1@GTF2I!0.40!58.29!GTF2I;;chr3:141868293..141868355,-!p2@TFDP2!0.40!19.43!TFDP2;;chr2:208030647..208030689,-!p1@KLF7!0.40!18.46!KLF7;;chr1:8877692..8877732,-!p1@RERE!0.40!17.97!RERE;;chr1:227751231..227751273,+!p1@ZNF678!0.40!14.09!ZNF678;;chr9:137218341..137218361,+!p2@RXRA!0.40!8.74!RXRA;;chr9:3525867..3525902,-!p3@RFX3!0.40!7.29!RFX3;;chr3:71630980..71631110,-!p3@FOXP1!0.40!7.29!FOXP1;;chr21:36262032..36262062,-!p5@RUNX1!0.40!5.34!RUNX1;;chr1:33721900..33721921,+!p2@ZNF362!0.40!4.86!ZNF362;;chr19:52956798..52956843,+!p1@ZNF578!0.40!3.89!ZNF578;;
 +
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001003;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002097;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002416
 +
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316
 
|fonse_cell_line=
 
|fonse_cell_line=
 
|fonse_cell_line_closure=
 
|fonse_cell_line_closure=
Line 35: Line 42:
 
|fonse_treatment_closure=
 
|fonse_treatment_closure=
 
|has_quality=
 
|has_quality=
 +
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/skin%252c%2520fetal%252c%2520donor1.CNhs11774.10065-101I2.hg19.nobarcode.bam
 +
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/skin%252c%2520fetal%252c%2520donor1.CNhs11774.10065-101I2.hg19.ctss.bed.gz
 +
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/skin%252c%2520fetal%252c%2520donor1.CNhs11774.10065-101I2.hg19.nobarcode.rdna.fa.gz
 +
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/skin%252c%2520fetal%252c%2520donor1.CNhs11774.10065-101I2.hg38.nobarcode.bam
 +
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/skin%252c%2520fetal%252c%2520donor1.CNhs11774.10065-101I2.hg38.nobarcode.ctss.bed.gz
 
|id=FF:10065-101I2
 
|id=FF:10065-101I2
 
|is_a=EFO:0002091;;FF:0010065
 
|is_a=EFO:0002091;;FF:0010065
 
|is_obsolete=
 
|is_obsolete=
 +
|library_id=CNhs11774
 +
|library_id_phase_based=2:CNhs11774
 +
|microRNAs=
 +
|microRNAs_nn=
 +
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10065
 +
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10065
 
|name=skin, fetal, donor1
 
|name=skin, fetal, donor1
 
|namespace=FANTOM5
 
|namespace=FANTOM5
Line 43: Line 61:
 
|profile_cagescan=,,,
 
|profile_cagescan=,,,
 
|profile_hcage=CNhs11774,LSID820,release009,COMPLETED
 
|profile_hcage=CNhs11774,LSID820,release009,COMPLETED
|profile_rnaseq=,,,
+
|profile_rnaseq=
 
|profile_srnaseq=,,,
 
|profile_srnaseq=,,,
 +
|refex=http://refex.dbcls.jp/genelist.php?lang
 +
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|rna_box=101
 
|rna_box=101
 
|rna_catalog_number=Cat:RtHFN: Skin
 
|rna_catalog_number=Cat:RtHFN: Skin
Line 58: Line 79:
 
|rna_weight_ug=50
 
|rna_weight_ug=50
 
|sample_age=
 
|sample_age=
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|sample_cell_catalog=NA
 
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|sample_cell_line=
Line 79: Line 101:
 
|top_motifs=TBP:4.85936731923;MEF2{A,B,C,D}:3.16765596813;IKZF2:3.0389512701;SPZ1:2.87070752438;ZNF384:2.85707313032;MYBL2:2.6711013797;NKX2-3_NKX2-5:2.5933832806;HOX{A4,D4}:2.540546428;ESR1:2.53755918743;SOX5:2.52320987789;FOXL1:2.48561232928;NR5A1,2:2.47180110637;TAL1_TCF{3,4,12}:2.44095410915;TOPORS:2.41871705473;TBX4,5:2.36981473838;NR1H4:2.27870683521;KLF4:2.1408937539;NKX2-1,4:2.10133865592;NANOG:2.05686941254;MAZ:1.96182958015;TFAP2{A,C}:1.9527502693;PAX6:1.9150028987;ZNF238:1.91070433567;FOXA2:1.90206484625;IKZF1:1.87675238773;NR6A1:1.8607983028;POU3F1..4:1.85369847887;BPTF:1.80542532936;GCM1,2:1.76950462778;XBP1:1.76782303607;FOXM1:1.69642749926;TGIF1:1.67073432021;MED-1{core}:1.64410926243;PDX1:1.64129870007;RBPJ:1.62863439701;FOXP1:1.62201876255;GLI1..3:1.61704982852;TEF:1.56695127553;SRF:1.53654929948;TLX2:1.53326722727;LHX3,4:1.52659301865;ZIC1..3:1.47317555487;MZF1:1.45630158223;GTF2I:1.43843830447;T:1.43390232793;GATA4:1.37729800367;FOXD3:1.37289858115;HIC1:1.3606935701;TEAD1:1.35375945286;ALX1:1.35077814836;RXRA_VDR{dimer}:1.33177437489;ZNF148:1.29261910074;HMGA1,2:1.28604773969;TFAP4:1.27853692845;GFI1:1.26829511252;TFCP2:1.25190652646;SMAD1..7,9:1.23540123324;NKX6-1,2:1.21567909653;SP1:1.21001390344;TLX1..3_NFIC{dimer}:1.18340728907;SNAI1..3:1.15161547268;PRDM1:1.13860005807;PATZ1:1.13712050709;FOXO1,3,4:1.10068562189;ATF2:1.09424966789;GTF2A1,2:1.09279682298;ALX4:1.09278940304;PITX1..3:1.03081225474;MYFfamily:1.02380752346;MTF1:1.022303048;EP300:1.01995589878;POU1F1:1.01808438205;NKX3-2:1.01738029835;EGR1..3:0.986473886241;POU6F1:0.978883255923;LMO2:0.968080236795;XCPE1{core}:0.922259691286;FOXQ1:0.910463433104;HSF1,2:0.874353687105;GFI1B:0.871966468025;ZEB1:0.861969148493;MAFB:0.858787479226;ATF6:0.839507675235;EVI1:0.833539970951;DBP:0.832035596753;POU5F1:0.815815085871;NFATC1..3:0.812967195972;UFEwm:0.809747625776;HOX{A5,B5}:0.793261973255;NFE2L1:0.783240464859;PAX5:0.78137540367;NHLH1,2:0.747706146761;SOX{8,9,10}:0.744750663574;CDC5L:0.743691546752;MTE{core}:0.724236245553;VSX1,2:0.694840042734;PAX4:0.688456650297;GZF1:0.670821484248;TFAP2B:0.660511235643;GATA6:0.630983028747;MYOD1:0.628301967265;BREu{core}:0.61158183788;RREB1:0.599621870497;AR:0.591580075;NKX3-1:0.589110238399;HBP1_HMGB_SSRP1_UBTF:0.585167012446;HMX1:0.580812204835;AIRE:0.491418132532;YY1:0.490553234756;FOX{D1,D2}:0.438201896187;NANOG{mouse}:0.432643738621;HOX{A6,A7,B6,B7}:0.384038724335;FOXP3:0.373917643002;PAX1,9:0.332050126719;SOX17:0.317231825147;ZFP161:0.311789252458;STAT5{A,B}:0.306452801982;TP53:0.294214393692;EBF1:0.290487738946;NR3C1:0.28945670032;SOX2:0.284811020773;ESRRA:0.281163753559;IRF7:0.275994110803;CUX2:0.215768324357;EN1,2:0.209923135498;FOX{F1,F2,J1}:0.132167571719;ZBTB6:0.13022926233;HNF4A_NR2F1,2:0.117192060729;PBX1:0.114790681338;REST:0.093412427572;HAND1,2:0.0852958060605;NFIX:0.0850936745881;LEF1_TCF7_TCF7L1,2:0.0811450539986;STAT2,4,6:0.0223422080539;ZNF423:-0.00507176732639;HNF1A:-0.00680752042297;FOXN1:-0.0641455958645;ZNF143:-0.0941912226869;RFX2..5_RFXANK_RFXAP:-0.124518271836;RORA:-0.15087740148;NFY{A,B,C}:-0.155465982061;CDX1,2,4:-0.20032590567;STAT1,3:-0.220828620159;FOX{I1,J2}:-0.23154331391;SREBF1,2:-0.235082906181;ATF4:-0.242664622276;E2F1..5:-0.248522132826;IRF1,2:-0.264369607724;FOSL2:-0.265731244509;RXR{A,B,G}:-0.283299697075;JUN:-0.301283488047;NRF1:-0.314093914733;SPI1:-0.316939704332;SPIB:-0.335582183305;PRRX1,2:-0.351706710947;OCT4_SOX2{dimer}:-0.372159917643;ZBTB16:-0.3733445808;ETS1,2:-0.374684040998;PAX3,7:-0.384833113843;ARID5B:-0.389288226335;HLF:-0.447036203864;ELF1,2,4:-0.447821473637;RFX1:-0.470907712975;PAX2:-0.485774781248;NFIL3:-0.489549725728;DMAP1_NCOR{1,2}_SMARC:-0.54281328297;FOS_FOS{B,L1}_JUN{B,D}:-0.546288354607;CEBPA,B_DDIT3:-0.58617247714;NFKB1_REL_RELA:-0.593821792989;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.612902716521;HES1:-0.61387534175;RUNX1..3:-0.63571163083;POU2F1..3:-0.701223531605;TFDP1:-0.71165476877;ATF5_CREB3:-0.721346868008;CREB1:-0.736115095976;HOXA9_MEIS1:-0.741103534406;ADNP_IRX_SIX_ZHX:-0.795428127847;ONECUT1,2:-0.798003649324;bHLH_family:-0.837980323619;AHR_ARNT_ARNT2:-0.845217196631;BACH2:-0.950579019803;MYB:-0.96713648506;PAX8:-0.971271789131;NFE2:-0.98909454085;NFE2L2:-1.03977253337;PPARG:-1.16389431307;NKX2-2,8:-1.20958215534;HIF1A:-1.2298778421;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.23180323637;CRX:-1.26982266656;ELK1,4_GABP{A,B1}:-1.28906762324
 
|top_motifs=TBP:4.85936731923;MEF2{A,B,C,D}:3.16765596813;IKZF2:3.0389512701;SPZ1:2.87070752438;ZNF384:2.85707313032;MYBL2:2.6711013797;NKX2-3_NKX2-5:2.5933832806;HOX{A4,D4}:2.540546428;ESR1:2.53755918743;SOX5:2.52320987789;FOXL1:2.48561232928;NR5A1,2:2.47180110637;TAL1_TCF{3,4,12}:2.44095410915;TOPORS:2.41871705473;TBX4,5:2.36981473838;NR1H4:2.27870683521;KLF4:2.1408937539;NKX2-1,4:2.10133865592;NANOG:2.05686941254;MAZ:1.96182958015;TFAP2{A,C}:1.9527502693;PAX6:1.9150028987;ZNF238:1.91070433567;FOXA2:1.90206484625;IKZF1:1.87675238773;NR6A1:1.8607983028;POU3F1..4:1.85369847887;BPTF:1.80542532936;GCM1,2:1.76950462778;XBP1:1.76782303607;FOXM1:1.69642749926;TGIF1:1.67073432021;MED-1{core}:1.64410926243;PDX1:1.64129870007;RBPJ:1.62863439701;FOXP1:1.62201876255;GLI1..3:1.61704982852;TEF:1.56695127553;SRF:1.53654929948;TLX2:1.53326722727;LHX3,4:1.52659301865;ZIC1..3:1.47317555487;MZF1:1.45630158223;GTF2I:1.43843830447;T:1.43390232793;GATA4:1.37729800367;FOXD3:1.37289858115;HIC1:1.3606935701;TEAD1:1.35375945286;ALX1:1.35077814836;RXRA_VDR{dimer}:1.33177437489;ZNF148:1.29261910074;HMGA1,2:1.28604773969;TFAP4:1.27853692845;GFI1:1.26829511252;TFCP2:1.25190652646;SMAD1..7,9:1.23540123324;NKX6-1,2:1.21567909653;SP1:1.21001390344;TLX1..3_NFIC{dimer}:1.18340728907;SNAI1..3:1.15161547268;PRDM1:1.13860005807;PATZ1:1.13712050709;FOXO1,3,4:1.10068562189;ATF2:1.09424966789;GTF2A1,2:1.09279682298;ALX4:1.09278940304;PITX1..3:1.03081225474;MYFfamily:1.02380752346;MTF1:1.022303048;EP300:1.01995589878;POU1F1:1.01808438205;NKX3-2:1.01738029835;EGR1..3:0.986473886241;POU6F1:0.978883255923;LMO2:0.968080236795;XCPE1{core}:0.922259691286;FOXQ1:0.910463433104;HSF1,2:0.874353687105;GFI1B:0.871966468025;ZEB1:0.861969148493;MAFB:0.858787479226;ATF6:0.839507675235;EVI1:0.833539970951;DBP:0.832035596753;POU5F1:0.815815085871;NFATC1..3:0.812967195972;UFEwm:0.809747625776;HOX{A5,B5}:0.793261973255;NFE2L1:0.783240464859;PAX5:0.78137540367;NHLH1,2:0.747706146761;SOX{8,9,10}:0.744750663574;CDC5L:0.743691546752;MTE{core}:0.724236245553;VSX1,2:0.694840042734;PAX4:0.688456650297;GZF1:0.670821484248;TFAP2B:0.660511235643;GATA6:0.630983028747;MYOD1:0.628301967265;BREu{core}:0.61158183788;RREB1:0.599621870497;AR:0.591580075;NKX3-1:0.589110238399;HBP1_HMGB_SSRP1_UBTF:0.585167012446;HMX1:0.580812204835;AIRE:0.491418132532;YY1:0.490553234756;FOX{D1,D2}:0.438201896187;NANOG{mouse}:0.432643738621;HOX{A6,A7,B6,B7}:0.384038724335;FOXP3:0.373917643002;PAX1,9:0.332050126719;SOX17:0.317231825147;ZFP161:0.311789252458;STAT5{A,B}:0.306452801982;TP53:0.294214393692;EBF1:0.290487738946;NR3C1:0.28945670032;SOX2:0.284811020773;ESRRA:0.281163753559;IRF7:0.275994110803;CUX2:0.215768324357;EN1,2:0.209923135498;FOX{F1,F2,J1}:0.132167571719;ZBTB6:0.13022926233;HNF4A_NR2F1,2:0.117192060729;PBX1:0.114790681338;REST:0.093412427572;HAND1,2:0.0852958060605;NFIX:0.0850936745881;LEF1_TCF7_TCF7L1,2:0.0811450539986;STAT2,4,6:0.0223422080539;ZNF423:-0.00507176732639;HNF1A:-0.00680752042297;FOXN1:-0.0641455958645;ZNF143:-0.0941912226869;RFX2..5_RFXANK_RFXAP:-0.124518271836;RORA:-0.15087740148;NFY{A,B,C}:-0.155465982061;CDX1,2,4:-0.20032590567;STAT1,3:-0.220828620159;FOX{I1,J2}:-0.23154331391;SREBF1,2:-0.235082906181;ATF4:-0.242664622276;E2F1..5:-0.248522132826;IRF1,2:-0.264369607724;FOSL2:-0.265731244509;RXR{A,B,G}:-0.283299697075;JUN:-0.301283488047;NRF1:-0.314093914733;SPI1:-0.316939704332;SPIB:-0.335582183305;PRRX1,2:-0.351706710947;OCT4_SOX2{dimer}:-0.372159917643;ZBTB16:-0.3733445808;ETS1,2:-0.374684040998;PAX3,7:-0.384833113843;ARID5B:-0.389288226335;HLF:-0.447036203864;ELF1,2,4:-0.447821473637;RFX1:-0.470907712975;PAX2:-0.485774781248;NFIL3:-0.489549725728;DMAP1_NCOR{1,2}_SMARC:-0.54281328297;FOS_FOS{B,L1}_JUN{B,D}:-0.546288354607;CEBPA,B_DDIT3:-0.58617247714;NFKB1_REL_RELA:-0.593821792989;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.612902716521;HES1:-0.61387534175;RUNX1..3:-0.63571163083;POU2F1..3:-0.701223531605;TFDP1:-0.71165476877;ATF5_CREB3:-0.721346868008;CREB1:-0.736115095976;HOXA9_MEIS1:-0.741103534406;ADNP_IRX_SIX_ZHX:-0.795428127847;ONECUT1,2:-0.798003649324;bHLH_family:-0.837980323619;AHR_ARNT_ARNT2:-0.845217196631;BACH2:-0.950579019803;MYB:-0.96713648506;PAX8:-0.971271789131;NFE2:-0.98909454085;NFE2L2:-1.03977253337;PPARG:-1.16389431307;NKX2-2,8:-1.20958215534;HIF1A:-1.2298778421;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.23180323637;CRX:-1.26982266656;ELK1,4_GABP{A,B1}:-1.28906762324
 
|xref=
 
|xref=
 +
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10065-101I2;search_select_hide=table117:FF:10065-101I2
 
}}
 
}}

Latest revision as of 03:19, 3 June 2020

Name:skin, fetal, donor1
Species:Human (Homo sapiens)
Library ID:CNhs11774
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueskin
dev stage26 weeks fetus
sexfemale
ageNA
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyBiochain
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberA507299
catalog numberCat:RtHFN: Skin
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005324
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11774 CAGE DRX008723 DRR009595
Accession ID Hg19

Library idBAMCTSS
CNhs11774 DRZ001020 DRZ002405
Accession ID Hg38

Library idBAMCTSS
CNhs11774 DRZ012370 DRZ013755
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)


Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis--0.0556
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.043
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0.39
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.295
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.73
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0.295
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0381
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.163
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.0324
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.172
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.415
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0.172
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.111
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0.172
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0.295
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous1.411
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0.283
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.187
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.39
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.469
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.126
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0.172
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.123
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.197
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.295
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.172
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.172
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth--0.00988
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small--0.121
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.0847
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.535
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.39
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal1.309
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.172
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.129
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0.343
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0.39
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic1.102
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0.172
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample


JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in this sample. Pearson's correlation between the number of TFBSs estimated by using the position-weight matrix for each promoter and its expression is expressed as Z-score by taking the ones based on random position-weight matrix, and the tail probability of the normal distribution corresponding to the Z-score is taken as the resulting P-value. Lower P-value indicates more (non-random) association of the motif to promoter expression
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs11774

Jaspar motif P-value
MA0002.2 7.16818e-5
MA0003.1 0.999
MA0004.1 0.00628
MA0006.1 0.577
MA0007.1 0.0713
MA0009.1 0.259
MA0014.1 0.201
MA0017.1 0.119
MA0018.2 0.063
MA0019.1 0.783
MA0024.1 0.879
MA0025.1 0.0122
MA0027.1 0.475
MA0028.1 1.10923e-6
MA0029.1 0.285
MA0030.1 0.882
MA0031.1 0.512
MA0035.2 0.125
MA0038.1 0.684
MA0039.2 0.414
MA0040.1 0.545
MA0041.1 0.583
MA0042.1 0.719
MA0043.1 0.00886
MA0046.1 0.107
MA0047.2 0.6
MA0048.1 0.103
MA0050.1 8.58037e-4
MA0051.1 0.00507
MA0052.1 4.8915e-13
MA0055.1 0.019
MA0057.1 0.818
MA0058.1 6.12061e-4
MA0059.1 0.00105
MA0060.1 0.142
MA0061.1 7.62777e-8
MA0062.2 1.08599e-13
MA0065.2 0.036
MA0066.1 0.12
MA0067.1 0.00897
MA0068.1 3.5306e-4
MA0069.1 0.866
MA0070.1 0.428
MA0071.1 0.491
MA0072.1 0.23
MA0073.1 0.566
MA0074.1 0.304
MA0076.1 7.46567e-8
MA0077.1 0.752
MA0078.1 0.422
MA0079.2 0.431
MA0080.2 3.97192e-8
MA0081.1 0.0052
MA0083.1 0.2
MA0084.1 0.0298
MA0087.1 0.0883
MA0088.1 0.0356
MA0090.1 0.0519
MA0091.1 0.281
MA0092.1 0.724
MA0093.1 0.00685
MA0099.2 2.50557e-24
MA0100.1 0.205
MA0101.1 8.68351e-7
MA0102.2 0.0525
MA0103.1 0.935
MA0104.2 1.69086e-4
MA0105.1 4.46982e-9
MA0106.1 0.135
MA0107.1 1.35805e-6
MA0108.2 4.68908e-23
MA0111.1 0.595
MA0112.2 0.596
MA0113.1 0.451
MA0114.1 0.0332
MA0115.1 0.0922
MA0116.1 1.18645e-4
MA0117.1 0.146
MA0119.1 0.72
MA0122.1 0.634
MA0124.1 0.667
MA0125.1 0.365
MA0131.1 0.455
MA0135.1 0.37
MA0136.1 3.49468e-13
MA0137.2 0.859
MA0138.2 0.0428
MA0139.1 0.00871
MA0140.1 0.022
MA0141.1 0.051
MA0142.1 0.0432
MA0143.1 0.413
MA0144.1 0.644
MA0145.1 0.359
MA0146.1 0.239
MA0147.1 8.41587e-5
MA0148.1 0.786
MA0149.1 0.0743
MA0150.1 8.50829e-13
MA0152.1 0.022
MA0153.1 0.663
MA0154.1 0.015
MA0155.1 0.177
MA0156.1 3.10573e-14
MA0157.1 0.304
MA0159.1 0.114
MA0160.1 0.00512
MA0162.1 0.7
MA0163.1 0.0027
MA0164.1 0.504
MA0258.1 0.825
MA0259.1 0.0308



FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in 169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs11774

Novel motif P-value
1 0.0893
10 0.116
100 0.485
101 0.917
102 0.348
103 0.0738
104 0.781
105 0.84
106 0.906
107 0.235
108 0.454
109 0.00175
11 0.0858
110 0.266
111 0.153
112 0.714
113 0.00362
114 0.0398
115 0.0425
116 0.801
117 0.00496
118 0.0201
119 0.644
12 0.383
120 0.664
121 0.851
122 0.0393
123 0.837
124 0.328
125 0.347
126 0.79
127 0.209
128 0.847
129 0.904
13 0.299
130 0.99
131 0.911
132 0.0351
133 0.302
134 0.506
135 0.737
136 0.17
137 0.498
138 0.485
139 0.238
14 0.47
140 0.479
141 0.517
142 0.735
143 0.00189
144 0.991
145 0.603
146 0.528
147 0.238
148 0.292
149 0.696
15 0.0693
150 0.413
151 0.899
152 0.732
153 0.391
154 0.538
155 0.379
156 0.296
157 0.456
158 0.0414
159 0.771
16 0.651
160 0.867
161 0.393
162 0.0611
163 0.29
164 0.109
165 0.481
166 0.0269
167 0.0348
168 0.673
169 0.304
17 0.487
18 0.0374
19 0.398
2 0.0949
20 0.0337
21 0.811
22 0.582
23 0.48
24 0.0782
25 0.472
26 0.432
27 0.619
28 0.841
29 0.0246
3 0.259
30 0.0259
31 0.892
32 6.96111e-8
33 0.21
34 0.434
35 0.316
36 0.036
37 0.041
38 0.536
39 0.133
4 0.592
40 0.0519
41 0.0896
42 0.219
43 0.177
44 0.841
45 0.553
46 0.314
47 0.136
48 0.26
49 0.129
5 0.416
50 0.612
51 0.567
52 0.378
53 0.579
54 0.987
55 0.423
56 0.489
57 0.927
58 0.481
59 0.83
6 0.623
60 0.893
61 0.0599
62 0.535
63 0.78
64 0.297
65 0.956
66 0.0314
67 0.165
68 0.672
69 0.956
7 0.504
70 0.23
71 0.053
72 0.523
73 0.0589
74 0.302
75 0.00768
76 0.0252
77 0.677
78 0.896
79 0.979
8 0.336
80 0.262
81 0.924
82 0.504
83 0.683
84 0.697
85 0.764
86 0.27
87 0.00325
88 0.665
89 0.833
9 0.875
90 0.097
91 0.139
92 0.896
93 0.614
94 0.075
95 0.00531
96 0.508
97 0.956
98 0.226
99 0.07



de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown.
Analyst:NA
library id: CNhs11774


FANTOM5 (FF) ontology


Direct parent terms


Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship
Analyst: Hideya Kawaji

link to source data
data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000014 (zone of skin)
0001003 (skin epidermis)
0002097 (skin of body)
0002199 (integument)
0007029 (surface)
0000483 (epithelium)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0003102 (surface structure)
0007376 (outer epithelium)
0010371 (ecto-epithelium)
0010317 (germ layer / neural crest derived structure)
0002416 (integumental system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000999 (fetal tissue sample)
0000004 (tissue sample)
0010065 (human skin - fetal sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship
Analyst: Hideya Kawaji

link to source data
data

UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)