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{{f5samples
 
{{f5samples
|DRA_sample_Accession=CAGE@DRS007909
+
|DRA_sample_Accession=CAGE@SAMD00005203
 +
|accession_numbers=CAGE;DRX008016;DRR008888;DRZ000313;DRZ001698;DRZ011663;DRZ013048
 
|ancestors_in_anatomy_facet=
 
|ancestors_in_anatomy_facet=
 
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000076,CL:0000255
 
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000076,CL:0000255
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|created_by=
 
|created_by=
 
|creation_date=
 
|creation_date=
|datafreeze_phase=1
+
|data_phase=2
 +
|datafreeze_phase=2
 
|def=
 
|def=
 
|expression_enrichment_score=chr11:34642612..34642646,+!p1@EHF!2.32!208.91!EHF;;chr1:209979467..209979494,-!p1@IRF6!2.27!208.91!IRF6;;chr2:176969228..176969260,+!p1@HOXD11!1.74!53.64!HOXD11;;chr12:66218598..66218645,+!p2@HMGA2!1.69!212.44!HMGA2;;chr15:83953397..83953425,-!p1@BNC1!1.66!50.46!BNC1;;chr3:189507432..189507459,+!p1@TP63!1.64!42.70!TP63;;chr2:114036488..114036504,-!p1@PAX8!1.59!38.11!PAX8;;chr6:1312325..1312340,+!p1@FOXQ1!1.49!48.35!FOXQ1;;chr10:8096631..8096660,+!p1@GATA3!1.49!36.35!GATA3;;chr12:77459306..77459365,-!p1@E2F7!1.48!346.90!E2F7;;chr1:209979411..209979433,-!p2@IRF6!1.47!28.58!IRF6;;chr12:66218255..66218304,+!p3@HMGA2!1.45!71.64!HMGA2;;chr11:65667884..65667895,-!p2@FOSL1!1.44!100.58!FOSL1;;chr12:66218836..66218888,+!p1@HMGA2!1.43!232.20!HMGA2;;chr12:54785054..54785072,-!p4@ZNF385A!1.40!27.17!ZNF385A;;chr6:10412600..10412637,-!p1@TFAP2A!1.39!39.17!TFAP2A;;chr12:54785074..54785122,-!p2@ZNF385A!1.39!36.00!ZNF385A;;chr3:111314186..111314204,-!p1@ZBED2!1.39!23.29!ZBED2;;chr12:66218003..66218018,+!p9@HMGA2!1.38!27.53!HMGA2;;chr10:8096772..8096787,+!p2@GATA3!1.33!24.00!GATA3;;chr1:6479968..6479986,-!p1@HES2!1.33!20.47!HES2;;chr15:67418119..67418162,+!p5@SMAD3!1.32!21.88!SMAD3;;chr17:8027418..8027432,-!p1@HES7!1.32!20.12!HES7;;chr5:72744594..72744609,-!p1@FOXD1!1.30!83.99!FOXD1;;chr11:120107344..120107351,+!p1@POU2F3!1.28!21.88!POU2F3;;chr12:27485762..27485776,+!p3@ARNTL2!1.27!46.94!ARNTL2;;chr11:65667846..65667868,-!p1@FOSL1!1.25!428.77!FOSL1;;chr17:70117153..70117174,+!p1@SOX9!1.24!166.57!SOX9;;chr13:36788658..36788703,-!p2@CCDC169-SOHLH2,p2@SOHLH2!1.24!16.23!SOHLH2;;chr11:34642656..34642667,+!p2@EHF!1.22!15.53!EHF;;chr1:201979703..201979721,+!p2@ELF3!1.22!15.53!ELF3;;chr15:67418047..67418093,+!p4@SMAD3!1.21!19.06!SMAD3;;chr7:101917447..101917479,+!p4@CUX1!1.18!14.12!CUX1;;chr8:102504651..102504683,+!p1@GRHL2!1.18!14.12!GRHL2;;chr8:10588010..10588030,-!p1@SOX7!1.17!13.76!SOX7;;chr2:176969179..176969226,+!p2@HOXD11!1.16!13.41!HOXD11;;chr5:134369905..134369972,-!p1@PITX1!1.13!19.06!PITX1;;chr5:172662197..172662216,-!p1@NKX2-5!1.11!12.00!NKX2-5;;chr12:66218573..66218596,+!p7@HMGA2!1.09!16.94!HMGA2;;chr3:32023232..32023273,+!p1@ZNF860!1.09!16.23!ZNF860;;chr2:46524897..46524911,+!p2@EPAS1!1.08!31.41!EPAS1;;chr7:28448965..28448994,+!p2@CREB5!1.07!37.76!CREB5;;chr5:137804405..137804444,+!p3@EGR1!1.07!13.06!EGR1;;chr19:45908292..45908374,-!p1@PPP1R13L!1.06!92.81!PPP1R13L;;chr5:134369879..134369898,-!p2@PITX1!1.06!10.59!PITX1;;chr17:7492684..7492778,-!p2@SOX15!1.05!21.88!SOX15;;chr1:24645832..24645853,+!p1@GRHL3!1.04!9.88!GRHL3;;chr10:44101850..44101896,+!p1@ZNF485!1.03!31.05!ZNF485;;chr13:73633131..73633149,+!p1@KLF5!1.01!101.28!KLF5;;chr6:34210478..34210481,+!p8@HMGA1!0.99!8.82!HMGA1;;chr6:10413188..10413249,-!p7@TFAP2A!0.98!8.47!TFAP2A;;chr12:66218443..66218461,+!p8@HMGA2!0.96!10.59!HMGA2;;chr3:37217736..37217753,-!p2@LRRFIP2!0.95!34.23!LRRFIP2;;chr12:96588368..96588394,+!p3@ELK3!0.95!21.88!ELK3;;chr5:72744445..72744466,-!p2@FOXD1!0.95!13.41!FOXD1;;chr19:33865009..33865090,+!p3@CEBPG!0.95!10.59!CEBPG;;chr19:45971246..45971265,+!p1@FOSB!0.94!148.92!FOSB;;chr7:101917407..101917443,+!p3@CUX1!0.94!7.76!CUX1;;chr7:28610099..28610113,+!p5@CREB5!0.94!7.76!CREB5;;chr21:36421535..36421610,-!p2@RUNX1!0.93!27.53!RUNX1;;chr6:106534192..106534224,+!p1@PRDM1!0.92!21.17!PRDM1;;chr15:74833584..74833626,+!p1@ARID3B!0.92!17.64!ARID3B;;chr10:44101902..44101932,+!p2@ZNF485!0.92!15.17!ZNF485;;chr19:53496768..53496799,-!p1@ZNF702P!0.92!11.65!ZNF702P;;chr6:10412392..10412409,-!p4@TFAP2A!0.92!8.47!TFAP2A;;chr11:65686732..65686756,+!p2@DRAP1!0.91!31.41!DRAP1;;chr12:66218378..66218401,+!p6@HMGA2!0.91!11.29!HMGA2;;chr10:64018918..64018936,+!p2@ZNF365!0.91!7.06!ZNF365;;chr1:158979792..158979814,+!p2@IFI16!0.90!69.87!IFI16;;chr7:99156434..99156510,+!p2@ZNF655!0.90!44.46!ZNF655;;chr5:137801160..137801176,+!p1@EGR1!0.89!706.85!EGR1;;chr10:44070016..44070069,-!p1@ZNF239!0.89!21.17!ZNF239;;chr10:8095593..8095625,+!p3@GATA3!0.89!8.12!GATA3;;chr17:35294075..35294102,+!p1@ENST00000559335!0.89!6.71!LHX1;;chr3:141087562..141087594,+!p12@ZBTB38!0.89!6.71!ZBTB38;;chr10:43134001..43134026,-!p1@ZNF33B!0.88!31.05!ZNF33B;;chr11:64764435..64764449,-!p1@BATF2!0.88!9.18!BATF2;;chr7:28725740..28725778,+!p1@CREB5!0.87!60.70!CREB5;;chr19:45579725..45579743,-!p1@ZNF296!0.87!30.35!ZNF296;;chr10:64134120..64134183,+!p1@ZNF365!0.87!7.76!ZNF365;;chr12:27485823..27485868,+!p2@ARNTL2!0.85!26.11!ARNTL2;;chr18:3447536..3447542,+!p23@TGIF1!0.85!6.00!TGIF1;;chr2:172967621..172967637,-!p1@DLX2!0.84!16.59!DLX2;;chr6:106534230..106534254,+!p2@PRDM1!0.84!15.53!PRDM1;;chr5:137804357..137804390,+!p4@EGR1!0.84!7.06!EGR1;;chr6:34204921..34204939,+!p3@HMGA1!0.83!185.27!HMGA1;;chr5:72743793..72743855,-!p4@FOXD1!0.82!6.71!FOXD1;;chr7:99156011..99156036,+!p7@ZNF655!0.82!6.71!ZNF655;;chr11:65668011..65668020,-!p3@FOSL1!0.82!5.65!FOSL1;;chr12:48298765..48298783,-!p2@VDR!0.81!12.00!VDR;;chr8:49833978..49833996,-!p1@SNAI2!0.80!118.93!SNAI2;;chr11:64073022..64073056,+!p1@ESRRA!0.80!69.52!ESRRA;;chr8:49833948..49833973,-!p2@SNAI2!0.80!36.70!SNAI2;;chr7:101917482..101917507,+!p6@CUX1!0.80!5.29!CUX1;;chr1:24646263..24646277,+!p4@GRHL3!0.80!5.29!GRHL3;;chr15:67418177..67418204,+!p9@SMAD3!0.80!5.29!SMAD3;;chr16:86612320..86612394,+!p1@FOXL1!0.80!5.29!FOXL1;;chr12:66218420..66218439,+!p12@HMGA2!0.80!5.29!HMGA2;;chr12:66218904..66218913,+!p11@HMGA2!0.80!5.29!HMGA2;;chr12:96588143..96588185,+!p1@ELK3!0.79!68.46!ELK3;;chr7:99156314..99156372,+!p4@ZNF655!0.78!18.00!ZNF655;;chr6:10412576..10412599,-!p5@TFAP2A!0.77!4.94!TFAP2A;;chr14:37131058..37131139,+!p1@PAX9!0.77!4.94!PAX9;;chr1:43148855..43148908,+!p4@YBX1!0.76!7.76!YBX1;;chr20:50721803..50721857,-!p2@ZFP64!0.76!7.76!ZFP64;;chr3:141087339..141087387,+!p2@ZBTB38!0.75!52.93!ZBTB38;;chr19:12203100..12203132,+!p1@ZNF788!0.75!9.88!ZNF788;;chr19:57792157..57792170,+!p6@ZNF460!0.75!7.06!ZNF460;;chr1:40367668..40367684,-!p2@MYCL1!0.75!4.59!MYCL1;;chr12:54393880..54393962,+!p1@HOXC9!0.75!4.59!HOXC9;;chr12:66218923..66218934,+!p14@HMGA2!0.75!4.59!HMGA2;;chr12:66358080..66358094,+!p15@HMGA2!0.75!4.59!HMGA2;;chr9:100615499..100615519,+!p1@FOXE1!0.75!4.59!FOXE1;;chr3:178789220..178789255,-!p6@ZMAT3!0.75!4.59!ZMAT3;;chr9:137263790..137263815,+!p7@RXRA!0.75!4.59!RXRA;;chr11:128392273..128392308,-!p2@ETS1!0.73!20.47!ETS1;;chr19:9785724..9785740,-!p2@ZNF562!0.73!19.06!ZNF562;;chr3:141087393..141087426,+!p3@ZBTB38!0.73!19.06!ZBTB38;;chr19:33864571..33864596,+!p2@CEBPG!0.73!11.65!CEBPG;;chr11:65686802..65686818,+!p6@DRAP1!0.73!8.12!DRAP1;;chr19:53193731..53193767,-!p1@ZNF83!0.72!42.35!ZNF83;;chr3:141868357..141868393,-!p3@TFDP2!0.72!31.41!TFDP2;;chr13:41593425..41593480,-!p1@ELF1!0.72!30.35!ELF1;;chr3:24536253..24536328,-!p1@THRB!0.72!8.47!THRB;;chr2:113999263..113999274,-!p13@PAX8!0.72!4.23!PAX8;;chr1:201979743..201979762,+!p1@ELF3!0.72!4.23!ELF3;;chr15:83953373..83953386,-!p2@BNC1!0.72!4.23!BNC1;;chr17:41622731..41622764,-!p5@ETV4!0.72!4.23!ETV4;;chr5:50679228..50679288,+!p1@ISL1!0.72!4.23!ISL1;;chr1:158979872..158979898,+!p3@IFI16!0.71!14.12!IFI16;;chr7:99613250..99613264,+!p2@ZKSCAN1!0.71!13.41!ZKSCAN1;;chr12:27485785..27485816,+!p1@ARNTL2!0.70!31.76!ARNTL2;;chr1:40367530..40367597,-!p1@MYCL1!0.70!7.76!MYCL1;;chr3:168864315..168864339,-!p2@MECOM!0.70!7.06!MECOM;;chr15:96869114..96869160,+!p11@NR2F2!0.70!5.65!NR2F2;;chr11:47236584..47236679,+!p1@DDB2!0.69!48.70!DDB2;;chr2:192015701..192015743,-!p1@STAT4!0.69!5.65!STAT4;;chr3:69811882..69811898,+!p6@MITF!0.69!3.88!MITF;;chr11:65554528..65554546,+!p1@OVOL1!0.69!3.88!OVOL1;;chr3:150126759..150126784,+!p2@TSC22D2!0.68!19.41!TSC22D2;;chr1:43148792..43148849,+!p2@YBX1!0.68!16.23!YBX1;;chr2:169312600..169312606,+!p2@CERS6!0.68!6.35!CERS6;;chr3:178789522..178789564,-!p2@ZMAT3!0.67!31.41!ZMAT3;;chr12:96588219..96588263,+!p2@ELK3!0.67!30.70!ELK3;;chr4:4291837..4291859,-!p2@LYAR!0.67!13.41!LYAR;;chr10:48355030..48355090,+!p1@ZNF488!0.67!4.94!ZNF488;;chr17:38256822..38256851,-!p1@NR1D1!0.66!32.11!NR1D1;;chr3:40566488..40566502,+!p3@ZNF621!0.66!7.06!ZNF621;;chr10:8097321..8097348,+!p4@GATA3!0.66!3.53!GATA3;;chr1:209979449..209979460,-!p3@IRF6!0.66!3.53!IRF6;;chr19:58694421..58694485,+!p1@ZNF274!0.65!21.17!ZNF274;;chr8:22550982..22550999,-!p1@EGR3!0.65!10.94!EGR3;;chr1:59249645..59249656,-!p4@JUN!0.65!9.88!JUN;;chr19:33793430..33793447,-!p1@CEBPA!0.63!15.88!CEBPA;;chr17:41622925..41622976,-!p3@ETV4!0.63!5.29!ETV4;;chr5:72744562..72744573,-!p3@FOXD1!0.63!4.23!FOXD1;;chr12:80084737..80084763,-!p3@PAWR!0.62!13.76!PAWR;;chr17:46687959..46688007,-!p2@HOXB7!0.62!4.59!HOXB7;;chr15:101069113..101069169,-!p1@CERS3!0.62!3.18!CERS3;;chr15:67418099..67418118,+!p16@SMAD3!0.62!3.18!SMAD3;;chr17:46703240..46703257,-!p6@HOXB9!0.62!3.18!HOXB9;;chr8:102504690..102504704,+!p3@GRHL2!0.62!3.18!GRHL2;;chr12:66357214..66357233,+!p13@HMGA2!0.62!3.18!HMGA2;;chr19:58740449..58740456,+!p3@ZNF544!0.62!3.18!ZNF544;;chr20:18038521..18038571,-!p1@OVOL2!0.62!3.18!OVOL2;;chr7:99613212..99613236,+!p1@ZKSCAN1!0.61!129.51!ZKSCAN1;;chr19:9695169..9695188,-!p1@ZNF121!0.61!65.64!ZNF121;;chr6:28973366..28973394,-!p2@ZNF311!0.61!3.88!ZNF311;;chr6:34204672..34204692,+!p1@HMGA1!0.60!407.24!HMGA1;;chr3:193853927..193853944,+!p1@HES1!0.60!118.93!HES1;;chr12:7079780..7079791,-!p2@PHB2!0.60!18.35!PHB2;;chr14:73360799..73360817,-!p1@DPF3!0.60!12.00!DPF3;;chr13:45010939..45011033,-!p1@TSC22D1!0.59!235.73!TSC22D1;;chr4:47916588..47916607,-!p1@NFXL1!0.59!29.29!NFXL1;;chr20:48599506..48599526,+!p1@SNAI1!0.59!22.23!SNAI1;;chr7:99156145..99156207,+!p5@ZNF655!0.59!11.65!ZNF655;;chr18:19749541..19749557,+!p1@GATA6!0.59!10.59!GATA6;;chr12:66218212..66218244,+!p5@HMGA2!0.59!4.59!HMGA2;;chr11:6947647..6947698,+!p2@ZNF215!0.59!4.23!ZNF215;;chr3:169490606..169490621,+!p3@MYNN!0.59!4.23!MYNN;;chr20:55204351..55204377,+!p1@TFAP2C!0.59!3.88!TFAP2C;;chr7:27135591..27135658,-!p1@HOXA1!0.58!6.00!HOXA1;;chr18:19749517..19749531,+!p3@GATA6!0.58!5.65!GATA6;;chr1:24645921..24645973,+!p2@GRHL3!0.58!2.82!GRHL3;;chr22:24093154..24093183,-!p2@ZNF70!0.58!2.82!ZNF70;;chr3:189507460..189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|expression_enrichment_score=chr11:34642612..34642646,+!p1@EHF!2.32!208.91!EHF;;chr1:209979467..209979494,-!p1@IRF6!2.27!208.91!IRF6;;chr2:176969228..176969260,+!p1@HOXD11!1.74!53.64!HOXD11;;chr12:66218598..66218645,+!p2@HMGA2!1.69!212.44!HMGA2;;chr15:83953397..83953425,-!p1@BNC1!1.66!50.46!BNC1;;chr3:189507432..189507459,+!p1@TP63!1.64!42.70!TP63;;chr2:114036488..114036504,-!p1@PAX8!1.59!38.11!PAX8;;chr6:1312325..1312340,+!p1@FOXQ1!1.49!48.35!FOXQ1;;chr10:8096631..8096660,+!p1@GATA3!1.49!36.35!GATA3;;chr12:77459306..77459365,-!p1@E2F7!1.48!346.90!E2F7;;chr1:209979411..209979433,-!p2@IRF6!1.47!28.58!IRF6;;chr12:66218255..66218304,+!p3@HMGA2!1.45!71.64!HMGA2;;chr11:65667884..65667895,-!p2@FOSL1!1.44!100.58!FOSL1;;chr12:66218836..66218888,+!p1@HMGA2!1.43!232.20!HMGA2;;chr12:54785054..54785072,-!p4@ZNF385A!1.40!27.17!ZNF385A;;chr6:10412600..10412637,-!p1@TFAP2A!1.39!39.17!TFAP2A;;chr12:54785074..54785122,-!p2@ZNF385A!1.39!36.00!ZNF385A;;chr3:111314186..111314204,-!p1@ZBED2!1.39!23.29!ZBED2;;chr12:66218003..66218018,+!p9@HMGA2!1.38!27.53!HMGA2;;chr10:8096772..8096787,+!p2@GATA3!1.33!24.00!GATA3;;chr1:6479968..6479986,-!p1@HES2!1.33!20.47!HES2;;chr15:67418119..67418162,+!p5@SMAD3!1.32!21.88!SMAD3;;chr17:8027418..8027432,-!p1@HES7!1.32!20.12!HES7;;chr5:72744594..72744609,-!p1@FOXD1!1.30!83.99!FOXD1;;chr11:120107344..120107351,+!p1@POU2F3!1.28!21.88!POU2F3;;chr12:27485762..27485776,+!p3@ARNTL2!1.27!46.94!ARNTL2;;chr11:65667846..65667868,-!p1@FOSL1!1.25!428.77!FOSL1;;chr17:70117153..70117174,+!p1@SOX9!1.24!166.57!SOX9;;chr13:36788658..36788703,-!p2@CCDC169-SOHLH2,p2@SOHLH2!1.24!16.23!SOHLH2;;chr11:34642656..34642667,+!p2@EHF!1.22!15.53!EHF;;chr1:201979703..201979721,+!p2@ELF3!1.22!15.53!ELF3;;chr15:67418047..67418093,+!p4@SMAD3!1.21!19.06!SMAD3;;chr7:101917447..101917479,+!p4@CUX1!1.18!14.12!CUX1;;chr8:102504651..102504683,+!p1@GRHL2!1.18!14.12!GRHL2;;chr8:10588010..10588030,-!p1@SOX7!1.17!13.76!SOX7;;chr2:176969179..176969226,+!p2@HOXD11!1.16!13.41!HOXD11;;chr5:134369905..134369972,-!p1@PITX1!1.13!19.06!PITX1;;chr5:172662197..172662216,-!p1@NKX2-5!1.11!12.00!NKX2-5;;chr12:66218573..66218596,+!p7@HMGA2!1.09!16.94!HMGA2;;chr3:32023232..32023273,+!p1@ZNF860!1.09!16.23!ZNF860;;chr2:46524897..46524911,+!p2@EPAS1!1.08!31.41!EPAS1;;chr7:28448965..28448994,+!p2@CREB5!1.07!37.76!CREB5;;chr5:137804405..137804444,+!p3@EGR1!1.07!13.06!EGR1;;chr19:45908292..45908374,-!p1@PPP1R13L!1.06!92.81!PPP1R13L;;chr5:134369879..134369898,-!p2@PITX1!1.06!10.59!PITX1;;chr17:7492684..7492778,-!p2@SOX15!1.05!21.88!SOX15;;chr1:24645832..24645853,+!p1@GRHL3!1.04!9.88!GRHL3;;chr10:44101850..44101896,+!p1@ZNF485!1.03!31.05!ZNF485;;chr13:73633131..73633149,+!p1@KLF5!1.01!101.28!KLF5;;chr6:34210478..34210481,+!p8@HMGA1!0.99!8.82!HMGA1;;chr6:10413188..10413249,-!p7@TFAP2A!0.98!8.47!TFAP2A;;chr12:66218443..66218461,+!p8@HMGA2!0.96!10.59!HMGA2;;chr3:37217736..37217753,-!p2@LRRFIP2!0.95!34.23!LRRFIP2;;chr12:96588368..96588394,+!p3@ELK3!0.95!21.88!ELK3;;chr5:72744445..72744466,-!p2@FOXD1!0.95!13.41!FOXD1;;chr19:33865009..33865090,+!p3@CEBPG!0.95!10.59!CEBPG;;chr19:45971246..45971265,+!p1@FOSB!0.94!148.92!FOSB;;chr7:101917407..101917443,+!p3@CUX1!0.94!7.76!CUX1;;chr7:28610099..28610113,+!p5@CREB5!0.94!7.76!CREB5;;chr21:36421535..36421610,-!p2@RUNX1!0.93!27.53!RUNX1;;chr6:106534192..106534224,+!p1@PRDM1!0.92!21.17!PRDM1;;chr15:74833584..74833626,+!p1@ARID3B!0.92!17.64!ARID3B;;chr10:44101902..44101932,+!p2@ZNF485!0.92!15.17!ZNF485;;chr19:53496768..53496799,-!p1@ZNF702P!0.92!11.65!ZNF702P;;chr6:10412392..10412409,-!p4@TFAP2A!0.92!8.47!TFAP2A;;chr11:65686732..65686756,+!p2@DRAP1!0.91!31.41!DRAP1;;chr12:66218378..66218401,+!p6@HMGA2!0.91!11.29!HMGA2;;chr10:64018918..64018936,+!p2@ZNF365!0.91!7.06!ZNF365;;chr1:158979792..158979814,+!p2@IFI16!0.90!69.87!IFI16;;chr7:99156434..99156510,+!p2@ZNF655!0.90!44.46!ZNF655;;chr5:137801160..137801176,+!p1@EGR1!0.89!706.85!EGR1;;chr10:44070016..44070069,-!p1@ZNF239!0.89!21.17!ZNF239;;chr10:8095593..8095625,+!p3@GATA3!0.89!8.12!GATA3;;chr17:35294075..35294102,+!p1@ENST00000559335!0.89!6.71!LHX1;;chr3:141087562..141087594,+!p12@ZBTB38!0.89!6.71!ZBTB38;;chr10:43134001..43134026,-!p1@ZNF33B!0.88!31.05!ZNF33B;;chr11:64764435..64764449,-!p1@BATF2!0.88!9.18!BATF2;;chr7:28725740..28725778,+!p1@CREB5!0.87!60.70!CREB5;;chr19:45579725..45579743,-!p1@ZNF296!0.87!30.35!ZNF296;;chr10:64134120..64134183,+!p1@ZNF365!0.87!7.76!ZNF365;;chr12:27485823..27485868,+!p2@ARNTL2!0.85!26.11!ARNTL2;;chr18:3447536..3447542,+!p23@TGIF1!0.85!6.00!TGIF1;;chr2:172967621..172967637,-!p1@DLX2!0.84!16.59!DLX2;;chr6:106534230..106534254,+!p2@PRDM1!0.84!15.53!PRDM1;;chr5:137804357..137804390,+!p4@EGR1!0.84!7.06!EGR1;;chr6:34204921..34204939,+!p3@HMGA1!0.83!185.27!HMGA1;;chr5:72743793..72743855,-!p4@FOXD1!0.82!6.71!FOXD1;;chr7:99156011..99156036,+!p7@ZNF655!0.82!6.71!ZNF655;;chr11:65668011..65668020,-!p3@FOSL1!0.82!5.65!FOSL1;;chr12:48298765..48298783,-!p2@VDR!0.81!12.00!VDR;;chr8:49833978..49833996,-!p1@SNAI2!0.80!118.93!SNAI2;;chr11:64073022..64073056,+!p1@ESRRA!0.80!69.52!ESRRA;;chr8:49833948..49833973,-!p2@SNAI2!0.80!36.70!SNAI2;;chr7:101917482..101917507,+!p6@CUX1!0.80!5.29!CUX1;;chr1:24646263..24646277,+!p4@GRHL3!0.80!5.29!GRHL3;;chr15:67418177..67418204,+!p9@SMAD3!0.80!5.29!SMAD3;;chr16:86612320..86612394,+!p1@FOXL1!0.80!5.29!FOXL1;;chr12:66218420..66218439,+!p12@HMGA2!0.80!5.29!HMGA2;;chr12:66218904..66218913,+!p11@HMGA2!0.80!5.29!HMGA2;;chr12:96588143..96588185,+!p1@ELK3!0.79!68.46!ELK3;;chr7:99156314..99156372,+!p4@ZNF655!0.78!18.00!ZNF655;;chr6:10412576..10412599,-!p5@TFAP2A!0.77!4.94!TFAP2A;;chr14:37131058..37131139,+!p1@PAX9!0.77!4.94!PAX9;;chr1:43148855..43148908,+!p4@YBX1!0.76!7.76!YBX1;;chr20:50721803..50721857,-!p2@ZFP64!0.76!7.76!ZFP64;;chr3:141087339..141087387,+!p2@ZBTB38!0.75!52.93!ZBTB38;;chr19:12203100..12203132,+!p1@ZNF788!0.75!9.88!ZNF788;;chr19:57792157..57792170,+!p6@ZNF460!0.75!7.06!ZNF460;;chr1:40367668..40367684,-!p2@MYCL1!0.75!4.59!MYCL1;;chr12:54393880..54393962,+!p1@HOXC9!0.75!4.59!HOXC9;;chr12:66218923..66218934,+!p14@HMGA2!0.75!4.59!HMGA2;;chr12:66358080..66358094,+!p15@HMGA2!0.75!4.59!HMGA2;;chr9:100615499..100615519,+!p1@FOXE1!0.75!4.59!FOXE1;;chr3:178789220..178789255,-!p6@ZMAT3!0.75!4.59!ZMAT3;;chr9:137263790..137263815,+!p7@RXRA!0.75!4.59!RXRA;;chr11:128392273..128392308,-!p2@ETS1!0.73!20.47!ETS1;;chr19:9785724..9785740,-!p2@ZNF562!0.73!19.06!ZNF562;;chr3:141087393..141087426,+!p3@ZBTB38!0.73!19.06!ZBTB38;;chr19:33864571..33864596,+!p2@CEBPG!0.73!11.65!CEBPG;;chr11:65686802..65686818,+!p6@DRAP1!0.73!8.12!DRAP1;;chr19:53193731..53193767,-!p1@ZNF83!0.72!42.35!ZNF83;;chr3:141868357..141868393,-!p3@TFDP2!0.72!31.41!TFDP2;;chr13:41593425..41593480,-!p1@ELF1!0.72!30.35!ELF1;;chr3:24536253..24536328,-!p1@THRB!0.72!8.47!THRB;;chr2:113999263..113999274,-!p13@PAX8!0.72!4.23!PAX8;;chr1:201979743..201979762,+!p1@ELF3!0.72!4.23!ELF3;;chr15:83953373..83953386,-!p2@BNC1!0.72!4.23!BNC1;;chr17:41622731..41622764,-!p5@ETV4!0.72!4.23!ETV4;;chr5:50679228..50679288,+!p1@ISL1!0.72!4.23!ISL1;;chr1:158979872..158979898,+!p3@IFI16!0.71!14.12!IFI16;;chr7:99613250..99613264,+!p2@ZKSCAN1!0.71!13.41!ZKSCAN1;;chr12:27485785..27485816,+!p1@ARNTL2!0.70!31.76!ARNTL2;;chr1:40367530..40367597,-!p1@MYCL1!0.70!7.76!MYCL1;;chr3:168864315..168864339,-!p2@MECOM!0.70!7.06!MECOM;;chr15:96869114..96869160,+!p11@NR2F2!0.70!5.65!NR2F2;;chr11:47236584..47236679,+!p1@DDB2!0.69!48.70!DDB2;;chr2:192015701..192015743,-!p1@STAT4!0.69!5.65!STAT4;;chr3:69811882..69811898,+!p6@MITF!0.69!3.88!MITF;;chr11:65554528..65554546,+!p1@OVOL1!0.69!3.88!OVOL1;;chr3:150126759..150126784,+!p2@TSC22D2!0.68!19.41!TSC22D2;;chr1:43148792..43148849,+!p2@YBX1!0.68!16.23!YBX1;;chr2:169312600..169312606,+!p2@CERS6!0.68!6.35!CERS6;;chr3:178789522..178789564,-!p2@ZMAT3!0.67!31.41!ZMAT3;;chr12:96588219..96588263,+!p2@ELK3!0.67!30.70!ELK3;;chr4:4291837..4291859,-!p2@LYAR!0.67!13.41!LYAR;;chr10:48355030..48355090,+!p1@ZNF488!0.67!4.94!ZNF488;;chr17:38256822..38256851,-!p1@NR1D1!0.66!32.11!NR1D1;;chr3:40566488..40566502,+!p3@ZNF621!0.66!7.06!ZNF621;;chr10:8097321..8097348,+!p4@GATA3!0.66!3.53!GATA3;;chr1:209979449..209979460,-!p3@IRF6!0.66!3.53!IRF6;;chr19:58694421..58694485,+!p1@ZNF274!0.65!21.17!ZNF274;;chr8:22550982..22550999,-!p1@EGR3!0.65!10.94!EGR3;;chr1:59249645..59249656,-!p4@JUN!0.65!9.88!JUN;;chr19:33793430..33793447,-!p1@CEBPA!0.63!15.88!CEBPA;;chr17:41622925..41622976,-!p3@ETV4!0.63!5.29!ETV4;;chr5:72744562..72744573,-!p3@FOXD1!0.63!4.23!FOXD1;;chr12:80084737..80084763,-!p3@PAWR!0.62!13.76!PAWR;;chr17:46687959..46688007,-!p2@HOXB7!0.62!4.59!HOXB7;;chr15:101069113..101069169,-!p1@CERS3!0.62!3.18!CERS3;;chr15:67418099..67418118,+!p16@SMAD3!0.62!3.18!SMAD3;;chr17:46703240..46703257,-!p6@HOXB9!0.62!3.18!HOXB9;;chr8:102504690..102504704,+!p3@GRHL2!0.62!3.18!GRHL2;;chr12:66357214..66357233,+!p13@HMGA2!0.62!3.18!HMGA2;;chr19:58740449..58740456,+!p3@ZNF544!0.62!3.18!ZNF544;;chr20:18038521..18038571,-!p1@OVOL2!0.62!3.18!OVOL2;;chr7:99613212..99613236,+!p1@ZKSCAN1!0.61!129.51!ZKSCAN1;;chr19:9695169..9695188,-!p1@ZNF121!0.61!65.64!ZNF121;;chr6:28973366..28973394,-!p2@ZNF311!0.61!3.88!ZNF311;;chr6:34204672..34204692,+!p1@HMGA1!0.60!407.24!HMGA1;;chr3:193853927..193853944,+!p1@HES1!0.60!118.93!HES1;;chr12:7079780..7079791,-!p2@PHB2!0.60!18.35!PHB2;;chr14:73360799..73360817,-!p1@DPF3!0.60!12.00!DPF3;;chr13:45010939..45011033,-!p1@TSC22D1!0.59!235.73!TSC22D1;;chr4:47916588..47916607,-!p1@NFXL1!0.59!29.29!NFXL1;;chr20:48599506..48599526,+!p1@SNAI1!0.59!22.23!SNAI1;;chr7:99156145..99156207,+!p5@ZNF655!0.59!11.65!ZNF655;;chr18:19749541..19749557,+!p1@GATA6!0.59!10.59!GATA6;;chr12:66218212..66218244,+!p5@HMGA2!0.59!4.59!HMGA2;;chr11:6947647..6947698,+!p2@ZNF215!0.59!4.23!ZNF215;;chr3:169490606..169490621,+!p3@MYNN!0.59!4.23!MYNN;;chr20:55204351..55204377,+!p1@TFAP2C!0.59!3.88!TFAP2C;;chr7:27135591..27135658,-!p1@HOXA1!0.58!6.00!HOXA1;;chr18:19749517..19749531,+!p3@GATA6!0.58!5.65!GATA6;;chr1:24645921..24645973,+!p2@GRHL3!0.58!2.82!GRHL3;;chr22:24093154..24093183,-!p2@ZNF70!0.58!2.82!ZNF70;;chr3:189507460..189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Line 38: Line 40:
 
|fonse_treatment_closure=
 
|fonse_treatment_closure=
 
|has_quality=
 
|has_quality=
 +
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/squamous%2520cell%2520carcinoma%2520cell%2520line%253aT3M-5.CNhs11739.10616-108G4.hg19.nobarcode.bam
 +
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/squamous%2520cell%2520carcinoma%2520cell%2520line%253aT3M-5.CNhs11739.10616-108G4.hg19.ctss.bed.gz
 +
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/squamous%2520cell%2520carcinoma%2520cell%2520line%253aT3M-5.CNhs11739.10616-108G4.hg19.nobarcode.rdna.fa.gz
 +
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/squamous%2520cell%2520carcinoma%2520cell%2520line%253aT3M-5.CNhs11739.10616-108G4.hg38.nobarcode.bam
 +
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/squamous%2520cell%2520carcinoma%2520cell%2520line%253aT3M-5.CNhs11739.10616-108G4.hg38.nobarcode.ctss.bed.gz
 
|id=FF:10616-108G4
 
|id=FF:10616-108G4
 
|is_a=EFO:0002091;;FF:0000210;;FF:0102024
 
|is_a=EFO:0002091;;FF:0000210;;FF:0102024
 
|is_obsolete=
 
|is_obsolete=
|library_ids=CNhs11739
+
|library_id=CNhs11739
 +
|library_id_phase_based=2:CNhs11739
 +
|microRNAs=
 +
|microRNAs_nn=
 +
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10616
 +
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10616
 
|name=squamous cell carcinoma cell line:T3M-5
 
|name=squamous cell carcinoma cell line:T3M-5
 
|namespace=FANTOM5
 
|namespace=FANTOM5
Line 47: Line 59:
 
|profile_cagescan=,,,
 
|profile_cagescan=,,,
 
|profile_hcage=CNhs11739,LSID819,release009,COMPLETED
 
|profile_hcage=CNhs11739,LSID819,release009,COMPLETED
|profile_rnaseq=,,,
+
|profile_rnaseq=
 
|profile_srnaseq=,,,
 
|profile_srnaseq=,,,
 +
|refex=http://refex.dbcls.jp/genelist.php?lang
 
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Line 86: Line 99:
 
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|xref=
 
|xref=
}} {{DRAAccessionNumbers
+
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10616-108G4;search_select_hide=table117:FF:10616-108G4
|DRA_sample_Accession=CAGE@DRS007909
 
|accession_numbers=DRX008016;DRR008888;DRZ000313;DRZ001698;CAGE
 
|library_id=CNhs11739
 
 
}}
 
}}

Latest revision as of 05:31, 3 June 2020

Name:squamous cell carcinoma cell line:T3M-5
Species:Human (Homo sapiens)
Library ID:CNhs11739
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuethyroid
dev stageNA
sexfemale
age71
cell typeunclassifiable
cell lineT3M-5
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005203
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11739 CAGE DRX008016 DRR008888
Accession ID Hg19

Library idBAMCTSS
CNhs11739 DRZ000313 DRZ001698
Accession ID Hg38

Library idBAMCTSS
CNhs11739 DRZ011663 DRZ013048
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)


Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
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C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample


JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in this sample. Pearson's correlation between the number of TFBSs estimated by using the position-weight matrix for each promoter and its expression is expressed as Z-score by taking the ones based on random position-weight matrix, and the tail probability of the normal distribution corresponding to the Z-score is taken as the resulting P-value. Lower P-value indicates more (non-random) association of the motif to promoter expression
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs11739

Jaspar motif P-value
MA0002.2 0.571
MA0003.1 0.761
MA0004.1 0.321
MA0006.1 0.183
MA0007.1 0.394
MA0009.1 0.292
MA0014.1 0.0509
MA0017.1 0.667
MA0018.2 0.779
MA0019.1 0.406
MA0024.1 0.00591
MA0025.1 0.83
MA0027.1 0.899
MA0028.1 6.92274e-14
MA0029.1 0.167
MA0030.1 0.607
MA0031.1 0.702
MA0035.2 0.0511
MA0038.1 0.184
MA0039.2 0.0281
MA0040.1 0.59
MA0041.1 0.606
MA0042.1 0.551
MA0043.1 0.812
MA0046.1 0.128
MA0047.2 0.643
MA0048.1 0.477
MA0050.1 0.699
MA0051.1 0.289
MA0052.1 0.507
MA0055.1 0.00418
MA0057.1 0.18
MA0058.1 0.565
MA0059.1 0.0172
MA0060.1 0.153
MA0061.1 0.957
MA0062.2 5.73817e-19
MA0065.2 0.456
MA0066.1 0.795
MA0067.1 0.193
MA0068.1 0.464
MA0069.1 0.172
MA0070.1 0.481
MA0071.1 0.12
MA0072.1 0.984
MA0073.1 0.978
MA0074.1 0.535
MA0076.1 1.62074e-14
MA0077.1 0.3
MA0078.1 0.837
MA0079.2 0.792
MA0080.2 0.0253
MA0081.1 0.959
MA0083.1 0.702
MA0084.1 0.439
MA0087.1 0.0567
MA0088.1 0.0156
MA0090.1 0.01
MA0091.1 0.0716
MA0092.1 0.538
MA0093.1 0.246
MA0099.2 2.91381e-30
MA0100.1 0.284
MA0101.1 0.472
MA0102.2 0.528
MA0103.1 5.33524e-7
MA0104.2 0.179
MA0105.1 0.378
MA0106.1 5.07306e-10
MA0107.1 0.819
MA0108.2 0.153
MA0111.1 0.502
MA0112.2 0.45
MA0113.1 0.2
MA0114.1 0.847
MA0115.1 0.824
MA0116.1 0.059
MA0117.1 0.425
MA0119.1 0.183
MA0122.1 0.982
MA0124.1 0.212
MA0125.1 0.194
MA0131.1 0.878
MA0135.1 0.754
MA0136.1 0.00778
MA0137.2 0.242
MA0138.2 0.0427
MA0139.1 0.0406
MA0140.1 0.193
MA0141.1 0.325
MA0142.1 0.522
MA0143.1 0.799
MA0144.1 0.68
MA0145.1 0.0319
MA0146.1 0.371
MA0147.1 0.052
MA0148.1 0.086
MA0149.1 0.0671
MA0150.1 0.0156
MA0152.1 0.282
MA0153.1 0.84
MA0154.1 0.479
MA0155.1 0.186
MA0156.1 3.0494e-6
MA0157.1 0.66
MA0159.1 0.0105
MA0160.1 0.534
MA0162.1 0.766
MA0163.1 0.042
MA0164.1 0.57
MA0258.1 0.355
MA0259.1 0.513



FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in 169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs11739

Novel motif P-value
1 0.287
10 0.326
100 0.925
101 0.27
102 0.492
103 0.166
104 0.558
105 0.826
106 0.0178
107 0.00122
108 0.247
109 0.0085
11 0.599
110 0.116
111 0.481
112 0.563
113 0.0833
114 0.456
115 0.905
116 0.246
117 0.056
118 0.957
119 0.538
12 0.742
120 0.281
121 0.581
122 0.61
123 0.839
124 0.089
125 0.827
126 0.233
127 0.658
128 0.418
129 0.0628
13 0.0554
130 0.956
131 0.831
132 0.782
133 0.758
134 0.0437
135 0.0323
136 0.0316
137 0.455
138 0.117
139 0.448
14 0.999
140 0.227
141 0.774
142 0.628
143 0.764
144 0.543
145 0.271
146 0.795
147 0.558
148 0.714
149 0.961
15 0.435
150 0.588
151 0.301
152 0.128
153 0.898
154 0.642
155 0.767
156 0.433
157 0.856
158 0.685
159 0.482
16 0.0296
160 0.696
161 0.308
162 0.455
163 0.538
164 0.604
165 0.284
166 0.142
167 0.36
168 0.801
169 0.0475
17 0.119
18 0.157
19 0.982
2 0.851
20 0.257
21 0.903
22 0.815
23 0.502
24 0.197
25 0.786
26 0.206
27 0.71
28 0.0801
29 0.421
3 0.179
30 0.392
31 0.854
32 0.224
33 0.0212
34 0.128
35 0.397
36 0.0362
37 0.224
38 0.181
39 0.698
4 0.538
40 0.196
41 0.153
42 0.154
43 0.694
44 0.896
45 0.378
46 0.0907
47 0.265
48 0.24
49 0.71
5 0.349
50 0.416
51 0.905
52 0.874
53 0.452
54 0.445
55 0.0245
56 0.444
57 0.0319
58 0.886
59 0.848
6 0.95
60 0.257
61 0.607
62 0.815
63 0.126
64 0.948
65 0.358
66 0.00476
67 0.396
68 0.124
69 0.951
7 0.933
70 0.019
71 0.136
72 0.736
73 0.0294
74 0.817
75 0.0322
76 0.278
77 0.592
78 0.0283
79 0.107
8 0.279
80 0.611
81 0.7
82 0.647
83 0.485
84 0.604
85 0.969
86 0.277
87 0.00335
88 0.915
89 0.332
9 0.366
90 0.253
91 0.234
92 0.49
93 0.403
94 0.765
95 0.251
96 0.293
97 0.221
98 0.967
99 0.652



de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown.
Analyst:NA
library id: CNhs11739


FANTOM5 (FF) ontology


Direct parent terms


Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship
Analyst: Hideya Kawaji

link to source data
data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000076 (squamous epithelial cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
305 (carcinoma)
1749 (squamous cell carcinoma)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0102024 (squamous cell carcinoma cell line sample)
0101120 (epithelial cell line sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship
Analyst: Hideya Kawaji

link to source data
data

NA