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{{f5samples
 
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
+
|DRA_sample_Accession=CAGE@SAMD00005659
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000566,CL:0000723,CL:0000763,CL:0000837,CL:0000988,CL:0002032,CL:0002320,CL:0002371
+
|accession_numbers=CAGE;DRX007772;DRR008644;DRZ000069;DRZ001454;DRZ011419;DRZ012804
|ancestors_in_disease_facet=DOID:0050686,DOID:0060083,DOID:1240,DOID:14566,DOID:162,DOID:2531,DOID:4,DOID:8692
+
|ancestors_in_anatomy_facet=
 +
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000255
 +
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:2531,DOID:14566,DOID:0060083,DOID:1240,DOID:8692
 +
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100737,FF:0101035,FF:0101883,FF:0100740
 
|comment=
 
|comment=
 
|created_by=
 
|created_by=
 
|creation_date=
 
|creation_date=
 +
|data_phase=2
 +
|datafreeze_phase=2
 
|def=
 
|def=
|
+
|expression_enrichment_score
 
|fonse_cell_line=FF:0101035
 
|fonse_cell_line=FF:0101035
 
|fonse_cell_line_closure=FF:0101035
 
|fonse_cell_line_closure=FF:0101035
Line 35: Line 41:
 
|fonse_treatment_closure=
 
|fonse_treatment_closure=
 
|has_quality=
 
|has_quality=
 +
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.LQhCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M0%2529%2520cell%2520line%253aKasumi-3.CNhs13241.10789-110H6.hg19.nobarcode.bam
 +
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.LQhCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M0%2529%2520cell%2520line%253aKasumi-3.CNhs13241.10789-110H6.hg19.ctss.bed.gz
 +
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.LQhCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M0%2529%2520cell%2520line%253aKasumi-3.CNhs13241.10789-110H6.hg19.nobarcode.rdna.fa.gz
 +
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.LQhCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M0%2529%2520cell%2520line%253aKasumi-3.CNhs13241.10789-110H6.hg38.nobarcode.bam
 +
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.LQhCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M0%2529%2520cell%2520line%253aKasumi-3.CNhs13241.10789-110H6.hg38.nobarcode.ctss.bed.gz
 
|id=FF:10789-110H6
 
|id=FF:10789-110H6
|is_a=EFO:0002091;;FF:0000003;;FF:0000210;;FF:0101883
+
|is_a=EFO:0002091;;FF:0000210;;FF:0101883
 +
|is_obsolete=
 +
|library_id=CNhs13241
 +
|library_id_phase_based=2:CNhs13241
 +
|microRNAs=
 +
|microRNAs_nn=
 +
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10789
 +
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10789
 
|name=acute myeloid leukemia (FAB M0) cell line:Kasumi-3
 
|name=acute myeloid leukemia (FAB M0) cell line:Kasumi-3
 
|namespace=FANTOM5
 
|namespace=FANTOM5
Line 42: Line 60:
 
|profile_cagescan=,,,
 
|profile_cagescan=,,,
 
|profile_hcage=CNhs13241,LSID1006,release012,COMPLETED
 
|profile_hcage=CNhs13241,LSID1006,release012,COMPLETED
|profile_rnaseq=,,,
+
|profile_rnaseq=
 
|profile_srnaseq=,,,
 
|profile_srnaseq=,,,
 +
|refex=http://refex.dbcls.jp/genelist.php?lang
 +
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0,-0.277362132193514,-0.244355558547665,0,0,0,0,0,0,0,0,0,0,0.0760960040585542,0,0,-0.153323010348428,0,0,0,0,0,-0.0979578962680575,0,0,0.0641905189033015,0,0,0,0,0,0,0,0,0,0,0,0,-0.247541284470351,0,0,0,0,0,0,0,0,0.3177633728197,0,0,0,0.140825552791593,0,-0.043330089705205,0.0760960040585542,-0.0969923612426051,0,0,-0.0212476231545428,0,0,0,0,0,0,0,0,0,0,0.917883662366176,0,0,0.332242926988987,0,0,0,-0.0624110093031312,0.0380480020292771,0,0,0,0,-0.00636642453588654,-0.282245232202384,0,0,0,-0.0584468268118252,0.226656756850836,0,0,0,0,-0.0219393471791523,-0.100429198771618,0,0,0,0,0,0,0,0,0,0.0380480020292771,0,0,0,0,0,0,0,-0.0259608175266647,0,0,0,-0.207074288755302,-0.60393279483113,0,0,0,0,0,0
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|rna_box=110
 
|rna_box=110
 
|rna_catalog_number=
 
|rna_catalog_number=
Line 57: Line 78:
 
|rna_weight_ug=1.07514
 
|rna_weight_ug=1.07514
 
|sample_age=57
 
|sample_age=57
 +
|sample_category=cell lines
 
|sample_cell_catalog=jcrb1004
 
|sample_cell_catalog=jcrb1004
 
|sample_cell_line=Kasumi-3
 
|sample_cell_line=Kasumi-3
Line 69: Line 91:
 
|sample_ethnicity=J
 
|sample_ethnicity=J
 
|sample_experimental_condition=
 
|sample_experimental_condition=
 +
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.50584568653133e-245!GO:0043227;membrane-bound organelle;1.80907759678575e-223!GO:0043231;intracellular membrane-bound organelle;3.98824536625413e-223!GO:0043226;organelle;2.26969681590038e-205!GO:0043229;intracellular organelle;1.15746322049836e-204!GO:0005737;cytoplasm;1.24336822932221e-152!GO:0044422;organelle part;5.62407677584261e-144!GO:0044446;intracellular organelle part;4.2475798938623e-142!GO:0044444;cytoplasmic part;9.3701078840839e-118!GO:0044237;cellular metabolic process;1.97723962248059e-113!GO:0044238;primary metabolic process;1.51231473956571e-109!GO:0005634;nucleus;3.48142165924924e-108!GO:0032991;macromolecular complex;6.26597644213377e-108!GO:0043170;macromolecule metabolic process;1.12057843748186e-103!GO:0030529;ribonucleoprotein complex;5.3841348462969e-96!GO:0044428;nuclear part;1.2100763758904e-83!GO:0043233;organelle lumen;1.24948840014688e-80!GO:0031974;membrane-enclosed lumen;1.24948840014688e-80!GO:0003723;RNA binding;3.69854680518767e-79!GO:0005739;mitochondrion;7.86624104835799e-76!GO:0043283;biopolymer metabolic process;5.56054918114585e-65!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.72829812968186e-63!GO:0010467;gene expression;1.30636341035793e-57!GO:0006396;RNA processing;4.83095141110426e-57!GO:0005515;protein binding;6.76432012919215e-56!GO:0005840;ribosome;1.03245662072363e-55!GO:0006412;translation;2.02942660624381e-54!GO:0043234;protein complex;4.52328217891937e-53!GO:0031981;nuclear lumen;4.0692032184322e-50!GO:0044429;mitochondrial part;4.9570544417881e-50!GO:0003735;structural constituent of ribosome;7.72255996748809e-49!GO:0006259;DNA metabolic process;1.00566336927132e-48!GO:0019538;protein metabolic process;9.7750682785192e-48!GO:0016071;mRNA metabolic process;1.30350180225004e-45!GO:0044267;cellular protein metabolic process;1.89886292104854e-44!GO:0009058;biosynthetic process;8.35060670836655e-44!GO:0044260;cellular macromolecule metabolic process;9.28548913184738e-44!GO:0044249;cellular biosynthetic process;1.66051424095534e-43!GO:0009059;macromolecule biosynthetic process;5.72851222877476e-42!GO:0031967;organelle envelope;1.32091349336342e-41!GO:0031975;envelope;3.15632442708322e-41!GO:0033279;ribosomal subunit;4.36403323331794e-41!GO:0008380;RNA splicing;6.37228105951614e-41!GO:0031090;organelle membrane;1.566212426594e-40!GO:0005829;cytosol;5.39284694255365e-40!GO:0003676;nucleic acid binding;7.94432008180912e-40!GO:0006397;mRNA processing;9.97354891694305e-40!GO:0033036;macromolecule localization;2.34843175186483e-39!GO:0016043;cellular component organization and biogenesis;3.70797563716829e-38!GO:0015031;protein transport;7.96006664796273e-38!GO:0045184;establishment of protein localization;1.33741492994123e-35!GO:0065003;macromolecular complex assembly;1.35728689532129e-35!GO:0008104;protein localization;3.71610973646556e-35!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.19336299317749e-32!GO:0005654;nucleoplasm;4.28553898036392e-32!GO:0006996;organelle organization and biogenesis;8.67799718692732e-32!GO:0005681;spliceosome;3.4549047790349e-31!GO:0007049;cell cycle;1.14693103956418e-30!GO:0005740;mitochondrial envelope;1.64566448251911e-30!GO:0022607;cellular component assembly;1.80918527553533e-30!GO:0043228;non-membrane-bound organelle;2.7909704498615e-30!GO:0043232;intracellular non-membrane-bound organelle;2.7909704498615e-30!GO:0019866;organelle inner membrane;3.3032483939331e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.88007290111368e-30!GO:0005694;chromosome;1.32309439666888e-29!GO:0046907;intracellular transport;2.75480675700211e-29!GO:0031966;mitochondrial membrane;2.34670126207238e-28!GO:0016070;RNA metabolic process;3.50050413606157e-28!GO:0006886;intracellular protein transport;4.02511050584282e-28!GO:0006974;response to DNA damage stimulus;4.38085966507762e-28!GO:0005743;mitochondrial inner membrane;2.45250193678548e-27!GO:0044427;chromosomal part;7.93034014784909e-27!GO:0044445;cytosolic part;5.67734342126078e-26!GO:0000166;nucleotide binding;2.10434554340252e-25!GO:0006281;DNA repair;3.50133706576113e-25!GO:0022402;cell cycle process;1.06207551463921e-24!GO:0044451;nucleoplasm part;7.90638213370901e-24!GO:0006119;oxidative phosphorylation;9.13055147995135e-24!GO:0031980;mitochondrial lumen;2.60338990118599e-23!GO:0005759;mitochondrial matrix;2.60338990118599e-23!GO:0051276;chromosome organization and biogenesis;7.08673231087101e-23!GO:0015935;small ribosomal subunit;4.19137346925015e-22!GO:0051649;establishment of cellular localization;7.79815550089929e-22!GO:0000278;mitotic cell cycle;1.29318439523387e-21!GO:0051641;cellular localization;2.86544515474974e-21!GO:0044455;mitochondrial membrane part;4.36334728082705e-21!GO:0015934;large ribosomal subunit;4.08340913956491e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.30020209514355e-20!GO:0016462;pyrophosphatase activity;6.5108205773135e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;6.56223732299119e-20!GO:0017111;nucleoside-triphosphatase activity;2.14951351553589e-19!GO:0009719;response to endogenous stimulus;4.402991072552e-19!GO:0022618;protein-RNA complex assembly;7.29493108281295e-19!GO:0005730;nucleolus;7.46252359811929e-19!GO:0006325;establishment and/or maintenance of chromatin architecture;9.06631804918758e-19!GO:0006457;protein folding;1.01033641712071e-18!GO:0006323;DNA packaging;4.6813513939091e-18!GO:0000087;M phase of mitotic cell cycle;6.74338415588836e-18!GO:0032553;ribonucleotide binding;1.14502048592723e-17!GO:0032555;purine ribonucleotide binding;1.14502048592723e-17!GO:0044265;cellular macromolecule catabolic process;1.23135034557752e-17!GO:0006260;DNA replication;1.55119426742164e-17!GO:0048770;pigment granule;1.69308059823007e-17!GO:0042470;melanosome;1.69308059823007e-17!GO:0022403;cell cycle phase;1.79404044799673e-17!GO:0007067;mitosis;2.18018091880316e-17!GO:0000502;proteasome complex (sensu Eukaryota);4.70401542233881e-17!GO:0005746;mitochondrial respiratory chain;5.33713207470091e-17!GO:0017076;purine nucleotide binding;7.34290928753341e-17!GO:0005761;mitochondrial ribosome;1.95729661094972e-16!GO:0000313;organellar ribosome;1.95729661094972e-16!GO:0051301;cell division;2.06608971405929e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.22112642592508e-16!GO:0016874;ligase activity;2.2897558843165e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.32181912400092e-16!GO:0005524;ATP binding;3.20125874164057e-16!GO:0032559;adenyl ribonucleotide binding;4.50873472869033e-16!GO:0006512;ubiquitin cycle;4.79688653820127e-16!GO:0051186;cofactor metabolic process;6.71872177160632e-16!GO:0042623;ATPase activity, coupled;7.26849731143168e-16!GO:0050136;NADH dehydrogenase (quinone) activity;9.49020119794925e-16!GO:0003954;NADH dehydrogenase activity;9.49020119794925e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;9.49020119794925e-16!GO:0000785;chromatin;1.29202433964036e-15!GO:0016604;nuclear body;1.33682163487579e-15!GO:0044248;cellular catabolic process;1.39463784896112e-15!GO:0043285;biopolymer catabolic process;1.77968432282163e-15!GO:0016887;ATPase activity;2.20479024127509e-15!GO:0006605;protein targeting;2.64533296031533e-15!GO:0000279;M phase;3.48720400811161e-15!GO:0030554;adenyl nucleotide binding;4.15531291468104e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;6.10984480753587e-15!GO:0006511;ubiquitin-dependent protein catabolic process;7.28545411930578e-15!GO:0019941;modification-dependent protein catabolic process;7.28545411930578e-15!GO:0043632;modification-dependent macromolecule catabolic process;7.28545411930578e-15!GO:0009057;macromolecule catabolic process;8.61095582725747e-15!GO:0042254;ribosome biogenesis and assembly;9.88155754610672e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;1.00169336011913e-14!GO:0000375;RNA splicing, via transesterification reactions;1.00169336011913e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.00169336011913e-14!GO:0065004;protein-DNA complex assembly;1.23962537732543e-14!GO:0044257;cellular protein catabolic process;1.55465418338731e-14!GO:0043412;biopolymer modification;1.55465418338731e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.01833411225781e-14!GO:0042775;organelle ATP synthesis coupled electron transport;4.29803778410298e-14!GO:0042773;ATP synthesis coupled electron transport;4.29803778410298e-14!GO:0051726;regulation of cell cycle;5.17278301236322e-14!GO:0008135;translation factor activity, nucleic acid binding;5.94010151179995e-14!GO:0000074;regulation of progression through cell cycle;7.15018752007343e-14!GO:0006333;chromatin assembly or disassembly;7.65004964515978e-14!GO:0030964;NADH dehydrogenase complex (quinone);9.37508833901276e-14!GO:0045271;respiratory chain complex I;9.37508833901276e-14!GO:0005747;mitochondrial respiratory chain complex I;9.37508833901276e-14!GO:0006913;nucleocytoplasmic transport;1.56428841472372e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.12017035762428e-13!GO:0008134;transcription factor binding;3.3601436445082e-13!GO:0051169;nuclear transport;3.77069401059277e-13!GO:0006732;coenzyme metabolic process;4.42526918820317e-13!GO:0006915;apoptosis;6.39674545123971e-13!GO:0012501;programmed cell death;6.59015633710433e-13!GO:0012505;endomembrane system;7.69333585170155e-13!GO:0044453;nuclear membrane part;1.18845996584083e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.42658221678378e-12!GO:0016607;nuclear speck;1.59411925546614e-12!GO:0003743;translation initiation factor activity;3.41379845903748e-12!GO:0009259;ribonucleotide metabolic process;3.48227432980053e-12!GO:0006163;purine nucleotide metabolic process;3.8229981731925e-12!GO:0006464;protein modification process;3.88934080082567e-12!GO:0050657;nucleic acid transport;3.89481833744645e-12!GO:0051236;establishment of RNA localization;3.89481833744645e-12!GO:0050658;RNA transport;3.89481833744645e-12!GO:0006403;RNA localization;4.81999178958265e-12!GO:0031965;nuclear membrane;4.87111399327411e-12!GO:0030163;protein catabolic process;5.8829462673315e-12!GO:0004386;helicase activity;7.20734125304944e-12!GO:0008219;cell death;1.01808737174469e-11!GO:0016265;death;1.01808737174469e-11!GO:0006164;purine nucleotide biosynthetic process;1.04380702642258e-11!GO:0006413;translational initiation;1.11917429507224e-11!GO:0051082;unfolded protein binding;1.29068346085849e-11!GO:0016568;chromatin modification;1.34964060440371e-11!GO:0005635;nuclear envelope;1.59146181655476e-11!GO:0009260;ribonucleotide biosynthetic process;2.86246733850707e-11!GO:0044432;endoplasmic reticulum part;2.88591310936485e-11!GO:0006334;nucleosome assembly;3.93961232957746e-11!GO:0009150;purine ribonucleotide metabolic process;5.33870414408385e-11!GO:0017038;protein import;5.35306304515712e-11!GO:0031497;chromatin assembly;5.80619143799581e-11!GO:0050794;regulation of cellular process;1.3214467987957e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.3818450172325e-10!GO:0005783;endoplasmic reticulum;1.49919519247729e-10!GO:0009152;purine ribonucleotide biosynthetic process;1.49949742623102e-10!GO:0008026;ATP-dependent helicase activity;1.51260540398598e-10!GO:0016787;hydrolase activity;1.67884283659373e-10!GO:0006446;regulation of translational initiation;1.91902163616139e-10!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.10216028133789e-10!GO:0005643;nuclear pore;2.15009531482335e-10!GO:0006364;rRNA processing;2.38909413850954e-10!GO:0016072;rRNA metabolic process;3.22776508779223e-10!GO:0051028;mRNA transport;3.25152253573993e-10!GO:0043687;post-translational protein modification;3.5359833828955e-10!GO:0009055;electron carrier activity;3.67884800662846e-10!GO:0019829;cation-transporting ATPase activity;3.94827917068222e-10!GO:0043566;structure-specific DNA binding;4.38858719360696e-10!GO:0065002;intracellular protein transport across a membrane;4.45277197333949e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;5.47380542181536e-10!GO:0006399;tRNA metabolic process;8.11794581540852e-10!GO:0003697;single-stranded DNA binding;1.0355320970685e-09!GO:0000775;chromosome, pericentric region;1.57042237542908e-09!GO:0030532;small nuclear ribonucleoprotein complex;1.5946265987084e-09!GO:0016192;vesicle-mediated transport;1.96598639016303e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.08915148229601e-09!GO:0006261;DNA-dependent DNA replication;2.47570582906984e-09!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.58238160980995e-09!GO:0008565;protein transporter activity;2.64590567335136e-09!GO:0051188;cofactor biosynthetic process;2.70776453186781e-09!GO:0009199;ribonucleoside triphosphate metabolic process;2.9741205351012e-09!GO:0009141;nucleoside triphosphate metabolic process;3.21361320383603e-09!GO:0015986;ATP synthesis coupled proton transport;3.75805956401969e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.75805956401969e-09!GO:0009056;catabolic process;3.78395630845509e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.88810470863404e-09!GO:0009144;purine nucleoside triphosphate metabolic process;5.88810470863404e-09!GO:0009060;aerobic respiration;6.18366432721675e-09!GO:0009142;nucleoside triphosphate biosynthetic process;6.18366432721675e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;6.18366432721675e-09!GO:0016779;nucleotidyltransferase activity;7.35698477077837e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.07193318007619e-09!GO:0009117;nucleotide metabolic process;9.53550016470436e-09!GO:0048193;Golgi vesicle transport;1.26100455404234e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.26454014323031e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.26454014323031e-08!GO:0019222;regulation of metabolic process;1.36511802054111e-08!GO:0046930;pore complex;1.53469481156443e-08!GO:0005789;endoplasmic reticulum membrane;1.74460566318406e-08!GO:0005819;spindle;1.84824121668033e-08!GO:0005773;vacuole;2.46841597739661e-08!GO:0042981;regulation of apoptosis;2.76482145163995e-08!GO:0006793;phosphorus metabolic process;2.98930225088011e-08!GO:0006796;phosphate metabolic process;2.98930225088011e-08!GO:0046034;ATP metabolic process;3.29699536580013e-08!GO:0003712;transcription cofactor activity;3.52639641522342e-08!GO:0015078;hydrogen ion transmembrane transporter activity;3.5860379252569e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.65448284584853e-08!GO:0005839;proteasome core complex (sensu Eukaryota);4.16728736617161e-08!GO:0043067;regulation of programmed cell death;4.16728736617161e-08!GO:0006754;ATP biosynthetic process;5.37864185822369e-08!GO:0006753;nucleoside phosphate metabolic process;5.37864185822369e-08!GO:0000323;lytic vacuole;5.37864185822369e-08!GO:0005764;lysosome;5.37864185822369e-08!GO:0006461;protein complex assembly;7.35414537489333e-08!GO:0008639;small protein conjugating enzyme activity;7.40912450832388e-08!GO:0045333;cellular respiration;7.93779188035019e-08!GO:0016469;proton-transporting two-sector ATPase complex;8.043503460297e-08!GO:0000786;nucleosome;8.63842990955931e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;9.51132117666846e-08!GO:0006099;tricarboxylic acid cycle;1.1829002432786e-07!GO:0046356;acetyl-CoA catabolic process;1.1829002432786e-07!GO:0005793;ER-Golgi intermediate compartment;1.358807541392e-07!GO:0051246;regulation of protein metabolic process;1.358807541392e-07!GO:0051170;nuclear import;1.37415239555683e-07!GO:0009108;coenzyme biosynthetic process;1.50485176396967e-07!GO:0006752;group transfer coenzyme metabolic process;1.58359223210946e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.64883180564219e-07!GO:0004842;ubiquitin-protein ligase activity;1.66295677064192e-07!GO:0006606;protein import into nucleus;2.05561473298668e-07!GO:0016310;phosphorylation;2.1726827379245e-07!GO:0019787;small conjugating protein ligase activity;2.88368046514211e-07!GO:0006084;acetyl-CoA metabolic process;2.9921079336558e-07!GO:0006366;transcription from RNA polymerase II promoter;3.2445139836508e-07!GO:0004298;threonine endopeptidase activity;3.27724887883111e-07!GO:0000245;spliceosome assembly;4.58202912219967e-07!GO:0005657;replication fork;5.65545200268819e-07!GO:0005768;endosome;6.34612450353056e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.35602636869138e-07!GO:0005794;Golgi apparatus;7.26256908007059e-07!GO:0045259;proton-transporting ATP synthase complex;7.31014451145578e-07!GO:0008094;DNA-dependent ATPase activity;7.61801191165509e-07!GO:0050789;regulation of biological process;7.66053220886862e-07!GO:0031323;regulation of cellular metabolic process;8.25790138643457e-07!GO:0005813;centrosome;8.71314121002794e-07!GO:0006310;DNA recombination;1.11176235036284e-06!GO:0005815;microtubule organizing center;1.23454300932939e-06!GO:0000075;cell cycle checkpoint;1.35801893292473e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.55523477433368e-06!GO:0016881;acid-amino acid ligase activity;1.65732118417023e-06!GO:0016740;transferase activity;1.79285937288625e-06!GO:0009109;coenzyme catabolic process;1.85524922935592e-06!GO:0005762;mitochondrial large ribosomal subunit;2.00817979513947e-06!GO:0000315;organellar large ribosomal subunit;2.00817979513947e-06!GO:0007051;spindle organization and biogenesis;2.92416979318453e-06!GO:0003899;DNA-directed RNA polymerase activity;3.51943829751626e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.64465018862757e-06!GO:0007243;protein kinase cascade;3.7812125272374e-06!GO:0007005;mitochondrion organization and biogenesis;4.12076503071533e-06!GO:0006950;response to stress;4.173662280055e-06!GO:0051187;cofactor catabolic process;4.36320244742377e-06!GO:0032446;protein modification by small protein conjugation;4.40307854835476e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;4.46054363135323e-06!GO:0003690;double-stranded DNA binding;4.69783317142415e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;5.54208943861534e-06!GO:0004812;aminoacyl-tRNA ligase activity;5.54208943861534e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;5.54208943861534e-06!GO:0009165;nucleotide biosynthetic process;5.76718779871342e-06!GO:0045786;negative regulation of progression through cell cycle;5.784759280983e-06!GO:0051329;interphase of mitotic cell cycle;6.35715708753243e-06!GO:0015630;microtubule cytoskeleton;6.5783917944009e-06!GO:0006350;transcription;8.1008618403553e-06!GO:0043038;amino acid activation;8.53187160977289e-06!GO:0006418;tRNA aminoacylation for protein translation;8.53187160977289e-06!GO:0043039;tRNA aminoacylation;8.53187160977289e-06!GO:0006613;cotranslational protein targeting to membrane;8.96687558639748e-06!GO:0016567;protein ubiquitination;9.30257982855602e-06!GO:0006302;double-strand break repair;9.56683771920256e-06!GO:0003713;transcription coactivator activity;9.77079128760339e-06!GO:0051325;interphase;1.05763563137671e-05!GO:0005770;late endosome;1.28245580622249e-05!GO:0065009;regulation of a molecular function;1.52441960386242e-05!GO:0051168;nuclear export;1.62177253040627e-05!GO:0003724;RNA helicase activity;1.66307848957634e-05!GO:0006888;ER to Golgi vesicle-mediated transport;2.03377125771882e-05!GO:0016363;nuclear matrix;2.18250218786506e-05!GO:0043069;negative regulation of programmed cell death;2.31849761813791e-05!GO:0016491;oxidoreductase activity;2.39343082729025e-05!GO:0006401;RNA catabolic process;2.47631570796414e-05!GO:0008654;phospholipid biosynthetic process;2.52446482190536e-05!GO:0010468;regulation of gene expression;2.56697659496892e-05!GO:0048523;negative regulation of cellular process;2.56697659496892e-05!GO:0000776;kinetochore;2.68348238949889e-05!GO:0043066;negative regulation of apoptosis;3.00866837119436e-05!GO:0003684;damaged DNA binding;3.68444091228833e-05!GO:0000151;ubiquitin ligase complex;4.17216212555243e-05!GO:0003677;DNA binding;4.2358418556486e-05!GO:0006352;transcription initiation;4.37802544090842e-05!GO:0007088;regulation of mitosis;4.58699914308254e-05!GO:0043623;cellular protein complex assembly;4.63943751353267e-05!GO:0000314;organellar small ribosomal subunit;4.91926435516368e-05!GO:0005763;mitochondrial small ribosomal subunit;4.91926435516368e-05!GO:0007059;chromosome segregation;4.96745364102045e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;4.9882436042206e-05!GO:0015399;primary active transmembrane transporter activity;4.9882436042206e-05!GO:0031324;negative regulation of cellular metabolic process;5.87841622337127e-05!GO:0003678;DNA helicase activity;6.61865184207794e-05!GO:0004518;nuclease activity;6.78879370525156e-05!GO:0048475;coated membrane;7.33774268162887e-05!GO:0030117;membrane coat;7.33774268162887e-05!GO:0043681;protein import into mitochondrion;7.39951702435629e-05!GO:0006612;protein targeting to membrane;7.97316306690324e-05!GO:0003729;mRNA binding;8.21301002181346e-05!GO:0019843;rRNA binding;8.46996741366152e-05!GO:0030120;vesicle coat;8.47284898832908e-05!GO:0030662;coated vesicle membrane;8.47284898832908e-05!GO:0006916;anti-apoptosis;8.47284898832908e-05!GO:0005667;transcription factor complex;8.69310511000429e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.28901979794357e-05!GO:0008033;tRNA processing;9.50175964785136e-05!GO:0044440;endosomal part;9.74521938524481e-05!GO:0010008;endosome membrane;9.74521938524481e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;9.9012406272537e-05!GO:0043021;ribonucleoprotein binding;0.000117616657868346!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000123198141500445!GO:0005885;Arp2/3 protein complex;0.000146329649594093!GO:0006818;hydrogen transport;0.000153407849818515!GO:0051087;chaperone binding;0.000153968343243276!GO:0015992;proton transport;0.000169077363564374!GO:0019899;enzyme binding;0.00017286137502422!GO:0065007;biological regulation;0.000177859831448431!GO:0044452;nucleolar part;0.000181031367304663!GO:0006402;mRNA catabolic process;0.000203161447022263!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000212623357412605!GO:0016853;isomerase activity;0.000212623357412605!GO:0051427;hormone receptor binding;0.000218381095308553!GO:0048519;negative regulation of biological process;0.000227930011351436!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000254302767681172!GO:0008632;apoptotic program;0.00025833205530063!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00031414329070479!GO:0016563;transcription activator activity;0.000314231181482406!GO:0006417;regulation of translation;0.000318304268029657!GO:0007093;mitotic cell cycle checkpoint;0.000324534374329537!GO:0006091;generation of precursor metabolites and energy;0.000339826265943528!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000343210595929817!GO:0008186;RNA-dependent ATPase activity;0.000355944186829069!GO:0006383;transcription from RNA polymerase III promoter;0.00038096900171129!GO:0009892;negative regulation of metabolic process;0.000381755867801222!GO:0016564;transcription repressor activity;0.000400209894380146!GO:0008168;methyltransferase activity;0.000440157921917251!GO:0035257;nuclear hormone receptor binding;0.00044162998736011!GO:0046489;phosphoinositide biosynthetic process;0.000470391548467817!GO:0032774;RNA biosynthetic process;0.000471619399660013!GO:0045454;cell redox homeostasis;0.00047551806354377!GO:0016741;transferase activity, transferring one-carbon groups;0.00048046673638599!GO:0006405;RNA export from nucleus;0.000490463654024624!GO:0046474;glycerophospholipid biosynthetic process;0.000497137122065776!GO:0005769;early endosome;0.000508960915206711!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000516423703479196!GO:0042802;identical protein binding;0.000541277621782835!GO:0009116;nucleoside metabolic process;0.000556411883667865!GO:0043492;ATPase activity, coupled to movement of substances;0.000559976141791907!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000573136280478907!GO:0032508;DNA duplex unwinding;0.000582848157755182!GO:0032392;DNA geometric change;0.000582848157755182!GO:0005788;endoplasmic reticulum lumen;0.000596932897952745!GO:0016859;cis-trans isomerase activity;0.000609385867885854!GO:0030880;RNA polymerase complex;0.000610476404872961!GO:0005525;GTP binding;0.000623060919399794!GO:0006351;transcription, DNA-dependent;0.000626279429320304!GO:0030384;phosphoinositide metabolic process;0.000628911139571254!GO:0000922;spindle pole;0.00064317961009226!GO:0000287;magnesium ion binding;0.000660466418088323!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000668051619446882!GO:0007006;mitochondrial membrane organization and biogenesis;0.000670904841839755!GO:0031072;heat shock protein binding;0.000683148317665512!GO:0005684;U2-dependent spliceosome;0.000722450241750763!GO:0006414;translational elongation;0.000786044563289748!GO:0051052;regulation of DNA metabolic process;0.000805652866323813!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000807983418778824!GO:0046483;heterocycle metabolic process;0.000835720733357708!GO:0043065;positive regulation of apoptosis;0.000901979923871258!GO:0005637;nuclear inner membrane;0.000994212087804674!GO:0004004;ATP-dependent RNA helicase activity;0.000995630934232268!GO:0016251;general RNA polymerase II transcription factor activity;0.00102746620628233!GO:0050790;regulation of catalytic activity;0.00110507095540083!GO:0006650;glycerophospholipid metabolic process;0.00113684786255877!GO:0006917;induction of apoptosis;0.00114827553121368!GO:0004527;exonuclease activity;0.00115548026329761!GO:0016481;negative regulation of transcription;0.00116096504623812!GO:0007052;mitotic spindle organization and biogenesis;0.00116391718206252!GO:0003924;GTPase activity;0.0012180237650848!GO:0007242;intracellular signaling cascade;0.00121892917244686!GO:0043068;positive regulation of programmed cell death;0.00124713213919955!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00133317049965624!GO:0000428;DNA-directed RNA polymerase complex;0.00133317049965624!GO:0046822;regulation of nucleocytoplasmic transport;0.0013750647226972!GO:0005798;Golgi-associated vesicle;0.00138717113124333!GO:0006284;base-excision repair;0.00149228456595018!GO:0006268;DNA unwinding during replication;0.00158362527519261!GO:0012502;induction of programmed cell death;0.00159202454458474!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.001617371317904!GO:0045449;regulation of transcription;0.00165776208985329!GO:0006082;organic acid metabolic process;0.0017281297922328!GO:0047485;protein N-terminus binding;0.00173492593010281!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00174287113147009!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00174287113147009!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00177656951269051!GO:0019752;carboxylic acid metabolic process;0.00189365645967974!GO:0031326;regulation of cellular biosynthetic process;0.00189604019219919!GO:0000228;nuclear chromosome;0.00190526222677692!GO:0003682;chromatin binding;0.0019814173992942!GO:0051252;regulation of RNA metabolic process;0.0020549134909715!GO:0042393;histone binding;0.00206615811596267!GO:0015980;energy derivation by oxidation of organic compounds;0.00213402705536082!GO:0005876;spindle microtubule;0.00215431576321195!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00217109323600011!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00217109323600011!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00217109323600011!GO:0048500;signal recognition particle;0.00223261426064982!GO:0006626;protein targeting to mitochondrion;0.00225686095382554!GO:0031988;membrane-bound vesicle;0.00238634521528417!GO:0031982;vesicle;0.00239981613855444!GO:0022890;inorganic cation transmembrane transporter activity;0.00241989471766086!GO:0009967;positive regulation of signal transduction;0.00266678557686219!GO:0031252;leading edge;0.00266747552464378!GO:0046467;membrane lipid biosynthetic process;0.00266747552464378!GO:0006338;chromatin remodeling;0.00274306200314227!GO:0051540;metal cluster binding;0.00274434345843986!GO:0051536;iron-sulfur cluster binding;0.00274434345843986!GO:0006506;GPI anchor biosynthetic process;0.002876669499048!GO:0051287;NAD binding;0.00291206084653033!GO:0005774;vacuolar membrane;0.0030905069833638!GO:0015036;disulfide oxidoreductase activity;0.00309975227725638!GO:0006289;nucleotide-excision repair;0.00330639542406325!GO:0007050;cell cycle arrest;0.00353417820759868!GO:0043488;regulation of mRNA stability;0.00360204059588279!GO:0043487;regulation of RNA stability;0.00360204059588279!GO:0008312;7S RNA binding;0.00367334120084445!GO:0003711;transcription elongation regulator activity;0.00367987457004743!GO:0000096;sulfur amino acid metabolic process;0.00375390364600089!GO:0009112;nucleobase metabolic process;0.00395524941776434!GO:0009124;nucleoside monophosphate biosynthetic process;0.00409969590497295!GO:0009123;nucleoside monophosphate metabolic process;0.00409969590497295!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00420387659128699!GO:0043414;biopolymer methylation;0.00421110935907059!GO:0043596;nuclear replication fork;0.00421336263056338!GO:0000082;G1/S transition of mitotic cell cycle;0.00428624977125129!GO:0031124;mRNA 3'-end processing;0.00450380164210116!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00451146920080588!GO:0006505;GPI anchor metabolic process;0.00453609540164248!GO:0016023;cytoplasmic membrane-bound vesicle;0.00469182289577515!GO:0031968;organelle outer membrane;0.00483987851709564!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00494597572552317!GO:0045047;protein targeting to ER;0.00494597572552317!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00521996325922652!GO:0015002;heme-copper terminal oxidase activity;0.00521996325922652!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00521996325922652!GO:0004129;cytochrome-c oxidase activity;0.00521996325922652!GO:0022411;cellular component disassembly;0.00530957770923867!GO:0030867;rough endoplasmic reticulum membrane;0.00532945447727438!GO:0031902;late endosome membrane;0.00546929209976485!GO:0032561;guanyl ribonucleotide binding;0.00547935527473965!GO:0019001;guanyl nucleotide binding;0.00547935527473965!GO:0048487;beta-tubulin binding;0.00586305100984947!GO:0030521;androgen receptor signaling pathway;0.00586382546373019!GO:0031410;cytoplasmic vesicle;0.0062424103461719!GO:0005758;mitochondrial intermembrane space;0.00629707250928575!GO:0019867;outer membrane;0.00629715347803521!GO:0015631;tubulin binding;0.00630670073677205!GO:0040029;regulation of gene expression, epigenetic;0.00644138722405085!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00646029104116814!GO:0006497;protein amino acid lipidation;0.0065703343965355!GO:0051539;4 iron, 4 sulfur cluster binding;0.00659492691795084!GO:0005048;signal sequence binding;0.00671218976294553!GO:0000178;exosome (RNase complex);0.00677894461794336!GO:0004003;ATP-dependent DNA helicase activity;0.00677894461794336!GO:0008234;cysteine-type peptidase activity;0.00680543033113923!GO:0003714;transcription corepressor activity;0.00684692470226068!GO:0031570;DNA integrity checkpoint;0.00705920025602903!GO:0032984;macromolecular complex disassembly;0.00705920025602903!GO:0006839;mitochondrial transport;0.00711066778542101!GO:0044437;vacuolar part;0.00716504151322372!GO:0032259;methylation;0.007222009341108!GO:0005741;mitochondrial outer membrane;0.00737091907343036!GO:0016272;prefoldin complex;0.00737091907343036!GO:0051098;regulation of binding;0.00744871300283243!GO:0007034;vacuolar transport;0.00756108498727787!GO:0006270;DNA replication initiation;0.0076689633339609!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.00777326974453111!GO:0006595;polyamine metabolic process;0.00778746062717342!GO:0016408;C-acyltransferase activity;0.00778772516628859!GO:0006144;purine base metabolic process;0.00791484095905583!GO:0016197;endosome transport;0.00795288260579038!GO:0016584;nucleosome positioning;0.00795288260579038!GO:0008047;enzyme activator activity;0.00797191046850897!GO:0008270;zinc ion binding;0.00800030700614747!GO:0030176;integral to endoplasmic reticulum membrane;0.00800030700614747!GO:0000049;tRNA binding;0.00800030700614747!GO:0033116;ER-Golgi intermediate compartment membrane;0.00825710723765391!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00833185533252137!GO:0048522;positive regulation of cellular process;0.00833357380241872!GO:0000792;heterochromatin;0.0083502846948247!GO:0009889;regulation of biosynthetic process;0.00854127811058395!GO:0009451;RNA modification;0.00885528541071857!GO:0042770;DNA damage response, signal transduction;0.00891272867695414!GO:0006520;amino acid metabolic process;0.0089741079700192!GO:0018193;peptidyl-amino acid modification;0.00902360259185353!GO:0000118;histone deacetylase complex;0.00916842264638055!GO:0008139;nuclear localization sequence binding;0.00916842264638055!GO:0051789;response to protein stimulus;0.00916842264638055!GO:0006986;response to unfolded protein;0.00916842264638055!GO:0007021;tubulin folding;0.0092074203294167!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00933989855441755!GO:0007040;lysosome organization and biogenesis;0.00940027983802669!GO:0051223;regulation of protein transport;0.0094794313123516!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00956527699392655!GO:0000725;recombinational repair;0.00956527699392655!GO:0000724;double-strand break repair via homologous recombination;0.00956527699392655!GO:0050662;coenzyme binding;0.00970133599015102!GO:0009161;ribonucleoside monophosphate metabolic process;0.00973369050819605!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.00973369050819605!GO:0046983;protein dimerization activity;0.00978708325897029!GO:0044431;Golgi apparatus part;0.0098278901388858!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00999365110821842!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0103091975015192!GO:0006611;protein export from nucleus;0.0103247062513892!GO:0005663;DNA replication factor C complex;0.0106494347322311!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0109904669909936!GO:0008610;lipid biosynthetic process;0.0109904669909936!GO:0031123;RNA 3'-end processing;0.0110137808850682!GO:0000339;RNA cap binding;0.0112163844734771!GO:0006220;pyrimidine nucleotide metabolic process;0.0114932063792819!GO:0044438;microbody part;0.0115017260007326!GO:0044439;peroxisomal part;0.0115017260007326!GO:0005765;lysosomal membrane;0.0115453399851615!GO:0000059;protein import into nucleus, docking;0.01158836102661!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0116680408236933!GO:0005669;transcription factor TFIID complex;0.0118367701380425!GO:0046128;purine ribonucleoside metabolic process;0.0121533307415202!GO:0042278;purine nucleoside metabolic process;0.0121533307415202!GO:0032200;telomere organization and biogenesis;0.0121770196746321!GO:0000723;telomere maintenance;0.0121770196746321!GO:0006275;regulation of DNA replication;0.0122002154668299!GO:0006740;NADPH regeneration;0.0124410194105594!GO:0006098;pentose-phosphate shunt;0.0124410194105594!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0124482705438794!GO:0043241;protein complex disassembly;0.0127115376714235!GO:0005832;chaperonin-containing T-complex;0.0127142199156139!GO:0043601;nuclear replisome;0.0130878829670423!GO:0030894;replisome;0.0130878829670423!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0131977265207538!GO:0006376;mRNA splice site selection;0.0135203110196087!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0135203110196087!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0139540290339574!GO:0004674;protein serine/threonine kinase activity;0.0142136132930856!GO:0030663;COPI coated vesicle membrane;0.0143366360699091!GO:0030126;COPI vesicle coat;0.0143366360699091!GO:0030118;clathrin coat;0.0147290502241119!GO:0008180;signalosome;0.0149499901101443!GO:0000819;sister chromatid segregation;0.0152036156013382!GO:0031903;microbody membrane;0.0152036156013382!GO:0005778;peroxisomal membrane;0.0152036156013382!GO:0000726;non-recombinational repair;0.0152036156013382!GO:0006355;regulation of transcription, DNA-dependent;0.0152036156013382!GO:0003887;DNA-directed DNA polymerase activity;0.0152241363727232!GO:0004576;oligosaccharyl transferase activity;0.0152824654276521!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0154932592874843!GO:0051920;peroxiredoxin activity;0.0154992249241865!GO:0044262;cellular carbohydrate metabolic process;0.0155000022213021!GO:0044454;nuclear chromosome part;0.0162038612261302!GO:0007033;vacuole organization and biogenesis;0.0162111181700056!GO:0016044;membrane organization and biogenesis;0.0164047747331101!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0166542118797047!GO:0006607;NLS-bearing substrate import into nucleus;0.0170812694233007!GO:0042158;lipoprotein biosynthetic process;0.0170966435831158!GO:0000070;mitotic sister chromatid segregation;0.0173348085014714!GO:0009615;response to virus;0.0178794304319334!GO:0006458;'de novo' protein folding;0.0180417550411478!GO:0051084;'de novo' posttranslational protein folding;0.0180417550411478!GO:0008629;induction of apoptosis by intracellular signals;0.0182679703914347!GO:0008538;proteasome activator activity;0.0186138712831305!GO:0004540;ribonuclease activity;0.0191609339868047!GO:0006891;intra-Golgi vesicle-mediated transport;0.0193604328131692!GO:0046966;thyroid hormone receptor binding;0.0195308768263436!GO:0006643;membrane lipid metabolic process;0.019566633290132!GO:0051101;regulation of DNA binding;0.0195699354278822!GO:0045045;secretory pathway;0.0197330956730618!GO:0006378;mRNA polyadenylation;0.0197714637847896!GO:0008250;oligosaccharyl transferase complex;0.0205091519840353!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0210148092648794!GO:0043624;cellular protein complex disassembly;0.02111522346919!GO:0000077;DNA damage checkpoint;0.0211990563770423!GO:0009119;ribonucleoside metabolic process;0.0212766632731527!GO:0019206;nucleoside kinase activity;0.0219250057726578!GO:0008624;induction of apoptosis by extracellular signals;0.0225423495887621!GO:0008408;3'-5' exonuclease activity;0.0227560362695099!GO:0051053;negative regulation of DNA metabolic process;0.023033992376543!GO:0033367;protein localization in mast cell secretory granule;0.023033992376543!GO:0033365;protein localization in organelle;0.023033992376543!GO:0033371;T cell secretory granule organization and biogenesis;0.023033992376543!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.023033992376543!GO:0033375;protease localization in T cell secretory granule;0.023033992376543!GO:0042629;mast cell granule;0.023033992376543!GO:0033377;maintenance of protein localization in T cell secretory granule;0.023033992376543!GO:0033364;mast cell secretory granule organization and biogenesis;0.023033992376543!GO:0033380;granzyme B localization in T cell secretory granule;0.023033992376543!GO:0033379;maintenance of protease localization in T cell secretory granule;0.023033992376543!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.023033992376543!GO:0033368;protease localization in mast cell secretory granule;0.023033992376543!GO:0033366;protein localization in secretory granule;0.023033992376543!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.023033992376543!GO:0033374;protein localization in T cell secretory granule;0.023033992376543!GO:0043022;ribosome binding;0.023033992376543!GO:0000119;mediator complex;0.0239407246079748!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0241242918540542!GO:0000209;protein polyubiquitination;0.0245465145046841!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0245785773270774!GO:0051235;maintenance of localization;0.0249861773185495!GO:0006672;ceramide metabolic process;0.0252342455631356!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0252706286138869!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0254879472269114!GO:0010257;NADH dehydrogenase complex assembly;0.0254879472269114!GO:0033108;mitochondrial respiratory chain complex assembly;0.0254879472269114!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0256422751509704!GO:0045039;protein import into mitochondrial inner membrane;0.0256422751509704!GO:0007264;small GTPase mediated signal transduction;0.0258917064280547!GO:0046914;transition metal ion binding;0.0261100428586755!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0261100428586755!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0261100428586755!GO:0009126;purine nucleoside monophosphate metabolic process;0.0261100428586755!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0261100428586755!GO:0032940;secretion by cell;0.0264777738579209!GO:0004300;enoyl-CoA hydratase activity;0.0269923278183207!GO:0004177;aminopeptidase activity;0.0270513091465746!GO:0006406;mRNA export from nucleus;0.0272499874252273!GO:0043284;biopolymer biosynthetic process;0.027463304022236!GO:0030518;steroid hormone receptor signaling pathway;0.0274783210392005!GO:0000152;nuclear ubiquitin ligase complex;0.0274804626901288!GO:0033157;regulation of intracellular protein transport;0.0275311054483559!GO:0042306;regulation of protein import into nucleus;0.0275311054483559!GO:0035258;steroid hormone receptor binding;0.0278580150973859!GO:0006360;transcription from RNA polymerase I promoter;0.0280822067859744!GO:0045185;maintenance of protein localization;0.0280934527131785!GO:0009303;rRNA transcription;0.0281517771245463!GO:0005869;dynactin complex;0.0282313123033497!GO:0030041;actin filament polymerization;0.0291472648738828!GO:0031970;organelle envelope lumen;0.029185484932964!GO:0004532;exoribonuclease activity;0.0292508350830599!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0292508350830599!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0295285111100443!GO:0005784;translocon complex;0.0295350954421758!GO:0018196;peptidyl-asparagine modification;0.0295350954421758!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0295350954421758!GO:0048471;perinuclear region of cytoplasm;0.0301019789814222!GO:0016407;acetyltransferase activity;0.0304126747555402!GO:0006007;glucose catabolic process;0.0309915033642736!GO:0008097;5S rRNA binding;0.0310106755607643!GO:0022415;viral reproductive process;0.0310835968925592!GO:0006779;porphyrin biosynthetic process;0.0311861427613203!GO:0033014;tetrapyrrole biosynthetic process;0.0311861427613203!GO:0008637;apoptotic mitochondrial changes;0.0315569768606345!GO:0000097;sulfur amino acid biosynthetic process;0.0321381360830299!GO:0030658;transport vesicle membrane;0.0325114390474895!GO:0004448;isocitrate dehydrogenase activity;0.0328291485453932!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0330024514447411!GO:0003746;translation elongation factor activity;0.0331447447139408!GO:0045892;negative regulation of transcription, DNA-dependent;0.0335082630652735!GO:0043281;regulation of caspase activity;0.0338182778485333!GO:0001726;ruffle;0.0342073916504489!GO:0030137;COPI-coated vesicle;0.0346097381671085!GO:0006778;porphyrin metabolic process;0.0348946101373121!GO:0033013;tetrapyrrole metabolic process;0.0348946101373121!GO:0046519;sphingoid metabolic process;0.0351109177264146!GO:0006730;one-carbon compound metabolic process;0.0352462043243247!GO:0033170;DNA-protein loading ATPase activity;0.0355165336146273!GO:0003689;DNA clamp loader activity;0.0355165336146273!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0355397361149209!GO:0008276;protein methyltransferase activity;0.0355611719866483!GO:0009396;folic acid and derivative biosynthetic process;0.0356859074602421!GO:0030508;thiol-disulfide exchange intermediate activity;0.0364566302889393!GO:0005095;GTPase inhibitor activity;0.0370600366139179!GO:0008022;protein C-terminus binding;0.0370600366139179!GO:0006266;DNA ligation;0.0372399427103059!GO:0031647;regulation of protein stability;0.037303220123406!GO:0003923;GPI-anchor transamidase activity;0.0378996828428316!GO:0016255;attachment of GPI anchor to protein;0.0378996828428316!GO:0042765;GPI-anchor transamidase complex;0.0378996828428316!GO:0004096;catalase activity;0.037904742684615!GO:0043130;ubiquitin binding;0.0380066041554024!GO:0032182;small conjugating protein binding;0.0380066041554024!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0385473040691647!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0385473040691647!GO:0044450;microtubule organizing center part;0.0397694771572509!GO:0031577;spindle checkpoint;0.0398843835152572!GO:0009081;branched chain family amino acid metabolic process;0.0398843835152572!GO:0048037;cofactor binding;0.0404838276883247!GO:0005777;peroxisome;0.0409205504074028!GO:0042579;microbody;0.0409205504074028!GO:0009262;deoxyribonucleotide metabolic process;0.0409205504074028!GO:0051085;chaperone cofactor-dependent protein folding;0.0414335221255202!GO:0051336;regulation of hydrolase activity;0.0417964263976795!GO:0032507;maintenance of cellular protein localization;0.0419608574443095!GO:0007259;JAK-STAT cascade;0.0419608574443095!GO:0004722;protein serine/threonine phosphatase activity;0.0421196234206903!GO:0006644;phospholipid metabolic process;0.0427554585646656!GO:0030433;ER-associated protein catabolic process;0.0436611737648987!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0436611737648987!GO:0022406;membrane docking;0.0441296218289142!GO:0048278;vesicle docking;0.0441296218289142!GO:0000790;nuclear chromatin;0.0446794196240629!GO:0008537;proteasome activator complex;0.0460041767714408!GO:0030132;clathrin coat of coated pit;0.046617293554697!GO:0006118;electron transport;0.0485057149185632!GO:0006635;fatty acid beta-oxidation;0.0487155572822777!GO:0005092;GDP-dissociation inhibitor activity;0.0487702705980649!GO:0006400;tRNA modification;0.0492984691034174!GO:0035267;NuA4 histone acetyltransferase complex;0.0493185254133605!GO:0016788;hydrolase activity, acting on ester bonds;0.049889291395755
 
|sample_id=10789
 
|sample_id=10789
 
|sample_note=
 
|sample_note=
Line 76: Line 99:
 
|sample_tissue=blood
 
|sample_tissue=blood
 
|top_motifs=E2F1..5:1.72644628951;ELF1,2,4:1.5470790401;MYB:1.47095167978;STAT1,3:1.46768205428;YY1:1.43837295917;ARID5B:1.42256706282;SPIB:1.33171578644;NANOG:1.26017295839;RUNX1..3:1.23696727344;NFY{A,B,C}:1.19768065865;GATA6:1.18223155653;FOXP3:1.17785967897;NANOG{mouse}:1.16038899618;DMAP1_NCOR{1,2}_SMARC:1.10989931382;TLX2:1.1019163969;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.05893912812;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.03485394892;ALX1:0.976737334392;PBX1:0.926528801323;SPI1:0.899294291914;FOXA2:0.846911461129;NR5A1,2:0.841498517118;ETS1,2:0.822974328971;POU2F1..3:0.790226726768;ZNF143:0.773457099386;ELK1,4_GABP{A,B1}:0.728802522007;HBP1_HMGB_SSRP1_UBTF:0.670158188981;NKX2-3_NKX2-5:0.516068899093;HAND1,2:0.513670726429;TGIF1:0.49665591752;FOX{I1,J2}:0.492531958703;IKZF2:0.438985237887;CDX1,2,4:0.402976955284;NRF1:0.377399473027;NR6A1:0.352033984642;NKX2-2,8:0.345252039918;MYOD1:0.292236199357;CUX2:0.285006449967;RORA:0.280048959313;SREBF1,2:0.279878368203;POU5F1:0.240869680139;OCT4_SOX2{dimer}:0.234006669533;ESRRA:0.228382959418;POU3F1..4:0.214174337437;FOXQ1:0.186644990752;SOX5:0.186547521162;ZNF148:0.173071220678;RXR{A,B,G}:0.163982834436;SOX{8,9,10}:0.16232864047;PAX4:0.138989894156;GFI1:0.13868842773;PAX8:0.128952558283;PAX5:0.12772601478;VSX1,2:0.0800736851521;BREu{core}:0.0785892427799;IRF1,2:0.0719360226605;CRX:0.0715026850251;HOX{A6,A7,B6,B7}:0.041614577457;PAX6:0.0342217863721;IRF7:0.0291442118478;BPTF:0.0253762323494;NFKB1_REL_RELA:0.0154440582777;HMGA1,2:0.0124336477448;RXRA_VDR{dimer}:0.00308859924423;PAX2:-0.00264120319811;DBP:-0.0320471280627;STAT5{A,B}:-0.033496468357;EN1,2:-0.0337891851719;PPARG:-0.0371878309052;GCM1,2:-0.038313564206;LHX3,4:-0.0396695140688;T:-0.0645928702216;HOXA9_MEIS1:-0.0894966814365;PAX3,7:-0.0901712460779;ZEB1:-0.10646723143;RFX2..5_RFXANK_RFXAP:-0.112975915721;TEF:-0.114115259049;ATF5_CREB3:-0.144960540025;ESR1:-0.149761916279;NFIL3:-0.162354957005;ZNF238:-0.166934924656;SOX17:-0.168925845447;GZF1:-0.173052908445;MEF2{A,B,C,D}:-0.180613416237;ONECUT1,2:-0.190028555843;HNF4A_NR2F1,2:-0.191367672017;NFE2:-0.208548526316;HNF1A:-0.211669633408;TFDP1:-0.213805623091;SNAI1..3:-0.247260347097;FOXM1:-0.256751275432;HIF1A:-0.260585364118;HES1:-0.276387613836;NFIX:-0.279078565008;AR:-0.28143110824;FOX{F1,F2,J1}:-0.281995187703;CEBPA,B_DDIT3:-0.291139061319;FOSL2:-0.304852722251;NFATC1..3:-0.308317920795;HSF1,2:-0.311740937257;STAT2,4,6:-0.321795593153;FOXN1:-0.343316797934;LEF1_TCF7_TCF7L1,2:-0.378331197439;CREB1:-0.39053311463;REST:-0.396796997642;PDX1:-0.399098889781;MYBL2:-0.403478731261;RBPJ:-0.407729555558;TFAP4:-0.409637328066;PRRX1,2:-0.418868062307;TBP:-0.426775593027;SMAD1..7,9:-0.430269784105;FOX{D1,D2}:-0.444173549516;AHR_ARNT_ARNT2:-0.446487768401;TAL1_TCF{3,4,12}:-0.450064876594;BACH2:-0.459338541472;NKX3-1:-0.471146267709;SOX2:-0.473806754931;PRDM1:-0.480697106089;FOS_FOS{B,L1}_JUN{B,D}:-0.490926062805;SPZ1:-0.497828648485;RFX1:-0.498449313254;PITX1..3:-0.504260128354;NFE2L1:-0.505787995908;HOX{A4,D4}:-0.51727768758;HLF:-0.529690959479;XBP1:-0.543738300324;ATF4:-0.58412018155;EP300:-0.593720499743;SRF:-0.606897843528;bHLH_family:-0.611679872431;ZNF384:-0.61824663316;FOXP1:-0.620594448601;GTF2I:-0.631047485936;ZBTB16:-0.640697773934;NFE2L2:-0.644346474468;KLF4:-0.676723053528;HIC1:-0.686178102346;EBF1:-0.700381602214;TOPORS:-0.712987282028;MYFfamily:-0.716596710827;MAFB:-0.737893310313;NR1H4:-0.752747366715;ATF2:-0.759398803672;NHLH1,2:-0.789101702813;FOXD3:-0.789660306623;FOXO1,3,4:-0.818725906722;XCPE1{core}:-0.842951666044;TP53:-0.864908304815;LMO2:-0.866885032712;POU1F1:-0.871354207915;ZNF423:-0.877893656527;ZBTB6:-0.903755155498;SP1:-0.905832520044;GLI1..3:-0.913034204285;TFAP2B:-0.915092188593;NKX6-1,2:-0.918697259237;GATA4:-0.936071372739;HOX{A5,B5}:-0.939903471493;UFEwm:-0.940486651641;IKZF1:-0.948392102963;MAZ:-0.949323168039;NKX2-1,4:-0.98026781202;MZF1:-0.984810504822;EVI1:-0.996099012323;HMX1:-1.00043956642;TFAP2{A,C}:-1.00084096764;NKX3-2:-1.00128308488;CDC5L:-1.00504880086;PAX1,9:-1.06953518126;GTF2A1,2:-1.07900962589;GFI1B:-1.08834867408;MTE{core}:-1.09454653703;ZFP161:-1.10131550727;JUN:-1.11088676589;ZIC1..3:-1.11453401226;TLX1..3_NFIC{dimer}:-1.13103203557;TEAD1:-1.16761279955;AIRE:-1.19282633133;EGR1..3:-1.2004231903;MTF1:-1.20899467838;RREB1:-1.29930551115;MED-1{core}:-1.36477340008;TBX4,5:-1.37378231996;POU6F1:-1.39147705606;ALX4:-1.4152752045;ATF6:-1.4166443021;PATZ1:-1.42955327316;NR3C1:-1.52428097105;ADNP_IRX_SIX_ZHX:-1.62059277327;TFCP2:-1.63480449481;FOXL1:-2.21198275551
 
|top_motifs=E2F1..5:1.72644628951;ELF1,2,4:1.5470790401;MYB:1.47095167978;STAT1,3:1.46768205428;YY1:1.43837295917;ARID5B:1.42256706282;SPIB:1.33171578644;NANOG:1.26017295839;RUNX1..3:1.23696727344;NFY{A,B,C}:1.19768065865;GATA6:1.18223155653;FOXP3:1.17785967897;NANOG{mouse}:1.16038899618;DMAP1_NCOR{1,2}_SMARC:1.10989931382;TLX2:1.1019163969;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.05893912812;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.03485394892;ALX1:0.976737334392;PBX1:0.926528801323;SPI1:0.899294291914;FOXA2:0.846911461129;NR5A1,2:0.841498517118;ETS1,2:0.822974328971;POU2F1..3:0.790226726768;ZNF143:0.773457099386;ELK1,4_GABP{A,B1}:0.728802522007;HBP1_HMGB_SSRP1_UBTF:0.670158188981;NKX2-3_NKX2-5:0.516068899093;HAND1,2:0.513670726429;TGIF1:0.49665591752;FOX{I1,J2}:0.492531958703;IKZF2:0.438985237887;CDX1,2,4:0.402976955284;NRF1:0.377399473027;NR6A1:0.352033984642;NKX2-2,8:0.345252039918;MYOD1:0.292236199357;CUX2:0.285006449967;RORA:0.280048959313;SREBF1,2:0.279878368203;POU5F1:0.240869680139;OCT4_SOX2{dimer}:0.234006669533;ESRRA:0.228382959418;POU3F1..4:0.214174337437;FOXQ1:0.186644990752;SOX5:0.186547521162;ZNF148:0.173071220678;RXR{A,B,G}:0.163982834436;SOX{8,9,10}:0.16232864047;PAX4:0.138989894156;GFI1:0.13868842773;PAX8:0.128952558283;PAX5:0.12772601478;VSX1,2:0.0800736851521;BREu{core}:0.0785892427799;IRF1,2:0.0719360226605;CRX:0.0715026850251;HOX{A6,A7,B6,B7}:0.041614577457;PAX6:0.0342217863721;IRF7:0.0291442118478;BPTF:0.0253762323494;NFKB1_REL_RELA:0.0154440582777;HMGA1,2:0.0124336477448;RXRA_VDR{dimer}:0.00308859924423;PAX2:-0.00264120319811;DBP:-0.0320471280627;STAT5{A,B}:-0.033496468357;EN1,2:-0.0337891851719;PPARG:-0.0371878309052;GCM1,2:-0.038313564206;LHX3,4:-0.0396695140688;T:-0.0645928702216;HOXA9_MEIS1:-0.0894966814365;PAX3,7:-0.0901712460779;ZEB1:-0.10646723143;RFX2..5_RFXANK_RFXAP:-0.112975915721;TEF:-0.114115259049;ATF5_CREB3:-0.144960540025;ESR1:-0.149761916279;NFIL3:-0.162354957005;ZNF238:-0.166934924656;SOX17:-0.168925845447;GZF1:-0.173052908445;MEF2{A,B,C,D}:-0.180613416237;ONECUT1,2:-0.190028555843;HNF4A_NR2F1,2:-0.191367672017;NFE2:-0.208548526316;HNF1A:-0.211669633408;TFDP1:-0.213805623091;SNAI1..3:-0.247260347097;FOXM1:-0.256751275432;HIF1A:-0.260585364118;HES1:-0.276387613836;NFIX:-0.279078565008;AR:-0.28143110824;FOX{F1,F2,J1}:-0.281995187703;CEBPA,B_DDIT3:-0.291139061319;FOSL2:-0.304852722251;NFATC1..3:-0.308317920795;HSF1,2:-0.311740937257;STAT2,4,6:-0.321795593153;FOXN1:-0.343316797934;LEF1_TCF7_TCF7L1,2:-0.378331197439;CREB1:-0.39053311463;REST:-0.396796997642;PDX1:-0.399098889781;MYBL2:-0.403478731261;RBPJ:-0.407729555558;TFAP4:-0.409637328066;PRRX1,2:-0.418868062307;TBP:-0.426775593027;SMAD1..7,9:-0.430269784105;FOX{D1,D2}:-0.444173549516;AHR_ARNT_ARNT2:-0.446487768401;TAL1_TCF{3,4,12}:-0.450064876594;BACH2:-0.459338541472;NKX3-1:-0.471146267709;SOX2:-0.473806754931;PRDM1:-0.480697106089;FOS_FOS{B,L1}_JUN{B,D}:-0.490926062805;SPZ1:-0.497828648485;RFX1:-0.498449313254;PITX1..3:-0.504260128354;NFE2L1:-0.505787995908;HOX{A4,D4}:-0.51727768758;HLF:-0.529690959479;XBP1:-0.543738300324;ATF4:-0.58412018155;EP300:-0.593720499743;SRF:-0.606897843528;bHLH_family:-0.611679872431;ZNF384:-0.61824663316;FOXP1:-0.620594448601;GTF2I:-0.631047485936;ZBTB16:-0.640697773934;NFE2L2:-0.644346474468;KLF4:-0.676723053528;HIC1:-0.686178102346;EBF1:-0.700381602214;TOPORS:-0.712987282028;MYFfamily:-0.716596710827;MAFB:-0.737893310313;NR1H4:-0.752747366715;ATF2:-0.759398803672;NHLH1,2:-0.789101702813;FOXD3:-0.789660306623;FOXO1,3,4:-0.818725906722;XCPE1{core}:-0.842951666044;TP53:-0.864908304815;LMO2:-0.866885032712;POU1F1:-0.871354207915;ZNF423:-0.877893656527;ZBTB6:-0.903755155498;SP1:-0.905832520044;GLI1..3:-0.913034204285;TFAP2B:-0.915092188593;NKX6-1,2:-0.918697259237;GATA4:-0.936071372739;HOX{A5,B5}:-0.939903471493;UFEwm:-0.940486651641;IKZF1:-0.948392102963;MAZ:-0.949323168039;NKX2-1,4:-0.98026781202;MZF1:-0.984810504822;EVI1:-0.996099012323;HMX1:-1.00043956642;TFAP2{A,C}:-1.00084096764;NKX3-2:-1.00128308488;CDC5L:-1.00504880086;PAX1,9:-1.06953518126;GTF2A1,2:-1.07900962589;GFI1B:-1.08834867408;MTE{core}:-1.09454653703;ZFP161:-1.10131550727;JUN:-1.11088676589;ZIC1..3:-1.11453401226;TLX1..3_NFIC{dimer}:-1.13103203557;TEAD1:-1.16761279955;AIRE:-1.19282633133;EGR1..3:-1.2004231903;MTF1:-1.20899467838;RREB1:-1.29930551115;MED-1{core}:-1.36477340008;TBX4,5:-1.37378231996;POU6F1:-1.39147705606;ALX4:-1.4152752045;ATF6:-1.4166443021;PATZ1:-1.42955327316;NR3C1:-1.52428097105;ADNP_IRX_SIX_ZHX:-1.62059277327;TFCP2:-1.63480449481;FOXL1:-2.21198275551
 +
|xref=
 +
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10789-110H6;search_select_hide=table117:FF:10789-110H6
 
}}
 
}}

Latest revision as of 06:04, 3 June 2020

Name:acute myeloid leukemia (FAB M0) cell line:Kasumi-3
Species:Human (Homo sapiens)
Library ID:CNhs13241
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexmale
age57
cell typemyeloid progenitor cell
cell lineKasumi-3
companyJAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005659
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13241 CAGE DRX007772 DRR008644
Accession ID Hg19

Library idBAMCTSS
CNhs13241 DRZ000069 DRZ001454
Accession ID Hg38

Library idBAMCTSS
CNhs13241 DRZ011419 DRZ012804
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)


Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis--0.0384
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.506
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0743
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.0655
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle--0.32
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.141
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed--0.277
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte--0.406
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.993
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.292
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.263
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.0761
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.121
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.0761
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.422
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.0274
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.194
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.0605
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.237
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.406
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample


JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in this sample. Pearson's correlation between the number of TFBSs estimated by using the position-weight matrix for each promoter and its expression is expressed as Z-score by taking the ones based on random position-weight matrix, and the tail probability of the normal distribution corresponding to the Z-score is taken as the resulting P-value. Lower P-value indicates more (non-random) association of the motif to promoter expression
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs13241

Jaspar motif P-value
MA0002.2 4.37189e-5
MA0003.1 0.259
MA0004.1 0.116
MA0006.1 0.393
MA0007.1 0.936
MA0009.1 0.126
MA0014.1 0.313
MA0017.1 0.00969
MA0018.2 0.093
MA0019.1 0.851
MA0024.1 2.32026e-7
MA0025.1 0.344
MA0027.1 0.167
MA0028.1 7.51645e-6
MA0029.1 0.612
MA0030.1 0.279
MA0031.1 0.96
MA0035.2 0.00184
MA0038.1 0.345
MA0039.2 0.553
MA0040.1 0.59
MA0041.1 0.316
MA0042.1 0.497
MA0043.1 0.941
MA0046.1 0.565
MA0047.2 0.512
MA0048.1 0.357
MA0050.1 0.0138
MA0051.1 0.173
MA0052.1 0.0987
MA0055.1 0.00712
MA0057.1 0.559
MA0058.1 0.00702
MA0059.1 0.00794
MA0060.1 1.42782e-9
MA0061.1 0.1
MA0062.2 3.20289e-13
MA0065.2 0.00463
MA0066.1 0.376
MA0067.1 0.728
MA0068.1 0.778
MA0069.1 0.04
MA0070.1 0.703
MA0071.1 0.0658
MA0072.1 0.447
MA0073.1 0.536
MA0074.1 0.931
MA0076.1 3.17153e-8
MA0077.1 0.658
MA0078.1 0.487
MA0079.2 0.498
MA0080.2 3.50931e-15
MA0081.1 1.40885e-4
MA0083.1 0.00755
MA0084.1 0.85
MA0087.1 0.76
MA0088.1 0.00301
MA0090.1 2.72378e-4
MA0091.1 0.771
MA0092.1 0.822
MA0093.1 0.0528
MA0099.2 0.00942
MA0100.1 4.04343e-5
MA0101.1 0.427
MA0102.2 0.105
MA0103.1 0.893
MA0104.2 0.0102
MA0105.1 0.00114
MA0106.1 0.736
MA0107.1 0.76
MA0108.2 0.00151
MA0111.1 0.868
MA0112.2 0.0838
MA0113.1 0.657
MA0114.1 0.0209
MA0115.1 0.0182
MA0116.1 1.00229e-4
MA0117.1 0.945
MA0119.1 0.811
MA0122.1 0.279
MA0124.1 0.322
MA0125.1 0.926
MA0131.1 0.221
MA0135.1 0.379
MA0136.1 2.65594e-24
MA0137.2 0.072
MA0138.2 0.406
MA0139.1 0.673
MA0140.1 4.37643e-4
MA0141.1 0.104
MA0142.1 0.489
MA0143.1 0.519
MA0144.1 0.273
MA0145.1 0.435
MA0146.1 0.0281
MA0147.1 0.011
MA0148.1 0.661
MA0149.1 0.193
MA0150.1 0.603
MA0152.1 0.532
MA0153.1 0.0183
MA0154.1 0.0231
MA0155.1 0.852
MA0156.1 2.26853e-21
MA0157.1 0.801
MA0159.1 0.681
MA0160.1 0.00226
MA0162.1 0.539
MA0163.1 5.25714e-16
MA0164.1 0.676
MA0258.1 0.182
MA0259.1 0.128



FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in 169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs13241

Novel motif P-value
1 0.37
10 0.032
100 0.993
101 0.613
102 0.393
103 0.0127
104 0.467
105 0.518
106 0.786
107 0.304
108 0.253
109 0.0322
11 0.0374
110 0.217
111 0.617
112 0.351
113 0.674
114 0.31
115 0.457
116 0.847
117 0.0272
118 0.0216
119 0.653
12 0.463
120 0.406
121 0.647
122 0.361
123 0.524
124 0.0583
125 0.123
126 0.115
127 0.177
128 0.815
129 0.216
13 0.0014
130 0.0524
131 0.22
132 0.468
133 0.731
134 0.833
135 0.468
136 0.119
137 0.153
138 0.796
139 0.944
14 0.98
140 0.416
141 0.624
142 0.547
143 0.414
144 0.246
145 0.858
146 0.51
147 0.0112
148 0.845
149 0.886
15 0.105
150 0.339
151 0.878
152 0.81
153 0.221
154 0.544
155 0.257
156 0.361
157 0.358
158 0.827
159 0.487
16 0.913
160 0.396
161 0.063
162 0.263
163 0.534
164 0.544
165 0.263
166 0.205
167 0.447
168 0.755
169 0.406
17 0.973
18 0.361
19 0.871
2 0.797
20 0.54
21 0.794
22 0.419
23 0.00686
24 0.0207
25 0.0242
26 0.152
27 0.25
28 0.97
29 0.0573
3 0.0201
30 0.309
31 0.33
32 0.0288
33 0.0939
34 0.528
35 0.29
36 0.0446
37 0.115
38 0.458
39 0.225
4 0.0966
40 0.0273
41 0.718
42 0.0581
43 0.452
44 0.611
45 0.921
46 0.17
47 0.0153
48 0.0202
49 0.322
5 0.831
50 0.897
51 0.729
52 0.344
53 0.305
54 0.538
55 0.813
56 0.828
57 0.538
58 0.188
59 0.229
6 0.816
60 0.606
61 0.136
62 0.228
63 0.953
64 0.191
65 0.47
66 0.00443
67 0.913
68 0.526
69 0.755
7 0.00176
70 0.215
71 0.0142
72 0.465
73 0.276
74 0.704
75 0.0112
76 0.276
77 0.686
78 0.00401
79 0.0233
8 0.264
80 0.358
81 0.974
82 0.883
83 0.0358
84 0.8
85 0.399
86 0.497
87 0.0259
88 0.324
89 0.81
9 0.141
90 0.283
91 0.863
92 0.0791
93 0.178
94 0.763
95 7.02915e-5
96 0.608
97 0.56
98 0.39
99 0.384



de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown.
Analyst:NA
library id: CNhs13241


FANTOM5 (FF) ontology


Direct parent terms


Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship
Analyst: Hideya Kawaji

link to source data
data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)
1240 (leukemia)
8692 (myeloid leukemia)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100737 (leukemia cell line sample)
0101035 (hematopoietic cell line sample)
0101883 (acute myeloid leukemia cell line sample)
0100740 (myeloid leukemia cell line sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship
Analyst: Hideya Kawaji

link to source data
data

CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)