FF:10797-110I5: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005765 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008031;DRR008903;DRZ000328;DRZ001713;DRZ011678;DRZ013063 | ||
|ancestors_in_disease_facet=DOID:0050686,DOID: | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001264,UBERON:0002100,UBERON:0000466,UBERON:0002075,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002323,UBERON:0005177,UBERON:0000464,UBERON:0004458,UBERON:0000949 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000083,CL:0000255 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:0050687,DOID:305,DOID:170,DOID:1793,DOID:299,DOID:4929 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0101120,FF:0100794,FF:0100167,FF:0103493 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr1:201979743..201979762,+!p1@ELF3!2.10!125.22!ELF3;;chr20:42984330..42984364,+!p2@HNF4A!1.95!87.31!HNF4A;;chr3:12330560..12330579,+!p1@PPARG!1.84!77.61!PPARG;;chr11:34645791..34645836,+!p3@EHF!1.80!62.43!EHF;;chr6:34204921..34204939,+!p3@HMGA1!1.75!1563.86!HMGA1;;chr1:201979703..201979721,+!p2@ELF3!1.72!51.92!ELF3;;chr17:36105042..36105060,-!p1@HNF1B!1.64!43.12!HNF1B;;chr13:73633131..73633149,+!p1@KLF5!1.63!426.13!KLF5;;chr5:321810..321877,+!p1@AHRR!1.33!63.33!AHRR;;chr17:46687959..46688007,-!p2@HOXB7!1.31!26.86!HOXB7;;chr17:35294075..35294102,+!p1@ENST00000559335!1.28!18.23!LHX1;;chr17:46675558..46675577,-!p2@HOXB6!1.25!16.80!HOXB6;;chr18:55102628..55102646,+!p2@ONECUT2!1.25!16.71!ONECUT2;;chr17:46682321..46682362,-!p1@HOXB6!1.23!16.08!HOXB6;;chr5:134369905..134369972,-!p1@PITX1!1.22!23.98!PITX1;;chr17:46675420..46675465,-!p3@HOXB6!1.22!17.97!HOXB6;;chr16:86612046..86612065,+!p3@FOXL1!1.22!15.72!FOXL1;;chr11:61520075..61520136,+!p1@C11orf9!1.21!32.34!C11orf9;;chr13:28543285..28543314,-!p2@CDX2!1.21!15.09!CDX2;;chr11:65667884..65667895,-!p2@FOSL1!1.18!53.98!FOSL1;;chr19:4153613..4153652,+!p1@CREB3L3!1.18!14.19!CREB3L3;;chr3:138665760..138665772,-!p3@FOXL2!1.18!14.01!FOXL2;;chr11:65687362..65687436,+!p3@DRAP1!1.17!62.97!DRAP1;;chr8:76319876..76319926,+!p1@HNF4G!1.17!13.83!HNF4G;;chr3:138665937..138665968,-!p1@FOXL2!1.17!13.74!FOXL2;;chr18:55102598..55102623,+!p1@ONECUT2!1.17!13.74!ONECUT2;;chr6:34204672..34204692,+!p1@HMGA1!1.13!1385.91!HMGA1;;chr12:66218255..66218304,+!p3@HMGA2!1.13!33.77!HMGA2;;chr6:34210478..34210481,+!p8@HMGA1!1.12!12.31!HMGA1;;chr13:100634031..100634045,+!p1@ZIC2!1.12!12.04!ZIC2;;chr1:199996733..199996781,+!p1@NR5A2!1.11!11.86!NR5A2;;chr12:66218598..66218645,+!p2@HMGA2!1.10!54.16!HMGA2;;chr18:19749541..19749557,+!p1@GATA6!1.10!36.56!GATA6;;chr16:86612149..86612161,+!p2@FOXL1!1.10!11.68!FOXL1;;chr12:66218836..66218888,+!p1@HMGA2!1.09!105.81!HMGA2;;chr16:86612320..86612394,+!p1@FOXL1!1.09!11.23!FOXL1;;chr20:42543441..42543497,+!p1@TOX2!1.05!46.62!TOX2;;chr3:193853927..193853944,+!p1@HES1!1.04!325.62!HES1;;chr7:97840743..97840786,+!p1@BHLHA15!1.04!9.88!BHLHA15;;chr11:65667846..65667868,-!p1@FOSL1!1.02!251.42!FOSL1;;chr11:120107344..120107351,+!p1@POU2F3!1.02!11.50!POU2F3;;chr13:100634130..100634143,+!p3@ZIC2!1.01!9.16!ZIC2;;chr17:46703212..46703238,-!p2@HOXB9!1.01!9.16!HOXB9;;chr2:113994526..113994556,-!p3@PAX8!0.99!8.80!PAX8;;chr3:138665774..138665786,-!p5@FOXL2!0.99!8.80!FOXL2;;chr20:42543506..42543549,+!p2@TOX2!0.98!21.20!TOX2;;chr10:114889045..114889074,+!p12@TCF7L2!0.98!8.62!TCF7L2;;chr13:28494130..28494168,+!p1@PDX1!0.98!8.62!PDX1;;chr3:138665969..138665993,-!p2@FOXL2!0.98!8.44!FOXL2;;chr6:10412600..10412637,-!p1@TFAP2A!0.97!14.01!TFAP2A;;chr3:138665702..138665729,-!p7@FOXL2!0.97!8.35!FOXL2;;chr7:27153454..27153469,-!p2@HOXA3!0.96!8.17!HOXA3;;chr10:114889016..114889037,+!p15@TCF7L2!0.96!8.08!TCF7L2;;chr10:114886551..114886601,+!p11@TCF7L2!0.95!7.99!TCF7L2;;chr17:41622765..41622821,-!p2@ETV4!0.94!11.95!ETV4;;chr6:10415276..10415341,-!p2@TFAP2A!0.94!9.43!TFAP2A;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.94!7.72!HOXC5;;chr12:66218183..66218209,+!p4@HMGA2!0.93!14.64!HMGA2;;chr20:50159198..50159299,-!p1@NFATC2!0.93!11.05!NFATC2;;chr10:8096772..8096787,+!p2@GATA3!0.92!8.80!GATA3;;chr2:157189180..157189290,-!p1@NR4A2!0.91!39.07!NR4A2;;chr11:31832658..31832681,-!p1@PAX6!0.91!7.10!PAX6;;chr1:200011711..200011752,+!p3@NR5A2!0.91!7.10!NR5A2;;chr16:86612174..86612188,+!p4@FOXL1!0.90!6.92!FOXL1;;chr5:137801160..137801176,+!p1@EGR1!0.89!712.58!EGR1;;chr3:12329397..12329433,+!p2@PPARG!0.89!15.81!PPARG;;chr12:66218212..66218244,+!p5@HMGA2!0.88!9.79!HMGA2;;chr17:46675469..46675481,-!p4@HOXB6!0.88!6.65!HOXB6;;chr10:114886405..114886424,+!p26@TCF7L2!0.88!6.56!TCF7L2;;chr5:134369879..134369898,-!p2@PITX1!0.87!6.38!PITX1;;chr1:119530493..119530572,-!p1@TBX15!0.86!6.29!TBX15;;chr1:25256756..25256774,-!p1@RUNX3!0.85!11.77!RUNX3;;chr17:41622925..41622976,-!p3@ETV4!0.85!9.34!ETV4;;chr10:8096631..8096660,+!p1@GATA3!0.85!7.55!GATA3;;chr13:100623375..100623425,-!p1@ZIC5!0.85!6.11!ZIC5;;chr12:57914286..57914304,-!p1@DDIT3!0.84!228.52!DDIT3;;chr9:2158443..2158481,+!p2@SMARCA2!0.84!17.61!SMARCA2;;chr3:12329358..12329393,+!p3@PPARG!0.84!15.36!PPARG;;chr13:73636621..73636647,+!p4@KLF5!0.84!5.93!KLF5;;chr12:57916466..57916523,+!p2@MBD6!0.83!55.15!MBD6;;chr13:73636252..73636307,+!p2@KLF5!0.83!6.83!KLF5;;chr5:50679228..50679288,+!p1@ISL1!0.83!5.75!ISL1;;chr3:138665790..138665809,-!p4@FOXL2!0.82!5.66!FOXL2;;chr10:114886432..114886455,+!p20@TCF7L2!0.81!5.48!TCF7L2;;chr20:42984073..42984085,+!p5@HNF4A!0.81!5.48!HNF4A;;chr12:54394416..54394467,+!p5@HOXC9!0.81!5.39!HOXC9;;chr15:96869255..96869291,+!p6@NR2F2!0.79!9.88!NR2F2;;chr12:54393880..54393962,+!p1@HOXC9!0.78!5.03!HOXC9;;chr2:113994491..113994515,-!p7@PAX8!0.77!4.94!PAX8;;chr8:11561684..11561751,+!p1@GATA4!0.77!4.94!GATA4;;chr14:38064429..38064486,-!p1@FOXA1!0.77!4.85!FOXA1;;chr10:94449703..94449718,+!p1@HHEX!0.76!20.12!HHEX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| 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X2;;chr20:49547731..49547753,-!p4@ADNP!0.17!2.60!ADNP;;chr13:45011349..45011391,-!p4@TSC22D1!0.17!2.43!TSC22D1;;chr4:121843844..121843904,-!p1@PRDM5!0.17!2.34!PRDM5;;chrX:153363188..153363203,-!p2@MECP2!0.17!2.34!MECP2;;chr17:38256973..38256990,-!p5@NR1D1!0.17!2.25!NR1D1;;chr22:42666593..42666623,-!p@chr22:42666593..42666623,-!0.17!2.25!TCF20;;chr19:35455110..35455149,-!p1@ZNF792!0.17!1.80!ZNF792;;chr19:17356436..17356481,-!p3@NR2F6!0.17!1.44!NR2F6;;chr3:170075357..170075368,+!p3@SKIL!0.17!1.26!SKIL;;chr12:51566592..51566617,-!p3@TFCP2!0.17!1.17!TFCP2;;chr12:124827609..124827643,-!p9@NCOR2!0.17!1.08!NCOR2;;chr16:54320101..54320125,-!p4@IRX3!0.17!1.08!IRX3;;chr17:46127997..46128015,+!p5@NFE2L1!0.17!0.99!NFE2L1;;chrX:107018969..107019024,-!p6@TSC22D3!0.17!0.99!TSC22D3;;chr11:6947647..6947698,+!p2@ZNF215!0.17!0.99!ZNF215;;chr10:31320860..31320873,-!p5@ZNF438!0.17!0.81!ZNF438;;chr3:170075080..170075089,+!p7@SKIL!0.17!0.81!SKIL;;chr20:52210338..52210352,-!p4@ZNF217!0.17!0.81!ZNF217;;chr8:116681108..116681120,-!p9@TRPS1!0.17!0.81!TRPS1;;chr8:116681275..116681290,-!p11@TRPS1!0.17!0.81!TRPS1;;chr7:4721998..4722013,+!p3@FOXK1!0.17!0.72!FOXK1;;chr8:81397876..81397898,+!p5@ZBTB10!0.17!0.72!ZBTB10;;chr2:178128578..178128597,-!p9@NFE2L2!0.17!0.72!NFE2L2;;chr17:41623259..41623278,-!p7@ETV4!0.17!0.72!ETV4;;chr16:69419724..69419735,-!p4@TERF2!0.17!0.63!TERF2;;chr16:88519743..88519754,+!p2@ZFPM1!0.17!0.63!ZFPM1;;chr17:40719102..40719141,+!p1@MLX!0.16!41.23!MLX;;chr14:103058948..103059005,+!p1@RCOR1!0.16!35.57!RCOR1;;chrX:153363125..153363182,-!p1@MECP2!0.16!34.49!MECP2;;chr4:57774042..57774114,+!p1@REST!0.16!31.08!REST;;chr19:40562072..40562143,-!p1@ZNF780B!0.16!11.32!ZNF780B;;chr19:4065485..4065546,-!p2@ZBTB7A!0.16!10.96!ZBTB7A;;chr1:53019059..53019176,-!p2@ZCCHC11!0.16!10.87!ZCCHC11;;chr6:35227480..35227546,+!p1@ZNF76!0.16!7.90!ZNF76;;chr3:141868357..141868393,-!p3@TFDP2!0.16!7.81!TFDP2;;chr1:157108180..157108193,-!p2@ETV3!0.16!6.29!ETV3;;chr19:11849700..11849803,-!p1@ZNF823!0.16!5.57!ZNF823;;chr19:15543565..15543579,-!p2@WIZ!0.16!4.94!WIZ;;chr1:153940354..153940395,+!p1@CREB3L4!0.16!4.49!CREB3L4;;chr21:27107465..27107557,+!p3@GABPA!0.16!4.04!GABPA;;chr2:239148671..239148686,-!p1@HES6!0.16!4.04!HES6;;chr2:66662281..66662308,+!p1@MEIS1!0.16!3.77!MEIS1;;chrX:106959661..106959763,-!p4@TSC22D3!0.16!3.05!TSC22D3;;chr22:20748456..20748488,+!p2@ZNF74!0.16!2.60!ZNF74;;chr5:138647473..138647476,+!p6@MATR3!0.16!2.52!MATR3;;chr1:91487836..91487854,-!p3@ZNF644!0.16!2.16!ZNF644;;chr4:146402925..146402957,+!p4@SMAD1!0.16!2.16!SMAD1;;chr17:7382911..7382932,-!p4@ZBTB4!0.16!2.07!ZBTB4;;chr1:158979851..158979865,+!p5@IFI16!0.16!2.07!IFI16;;chr10:44144264..44144286,-!p2@ZNF32!0.16!1.98!ZNF32;;chr1:8483821..8483845,-!p11@RERE!0.16!1.80!RERE;;chr9:94186085..94186096,-!p3@NFIL3!0.16!1.35!NFIL3;;chr6:28303901..28303944,-!p2@ZNF323!0.16!1.26!ZNF323;;chr7:4721870..4721878,+!p2@FOXK1!0.16!1.17!FOXK1;;chr8:145159277..145159282,+!p7@MAF1!0.16!1.17!MAF1;;chr22:29196492..29196503,-!p3@XBP1!0.16!1.17!XBP1;;chr1:247095162..247095173,-!p3@AHCTF1!0.16!1.17!AHCTF1;;chr4:146402795..146402816,+!p7@SMAD1!0.16!0.90!SMAD1;;chr7:27835758..27835772,+!p3@TAX1BP1!0.16!0.90!TAX1BP1;;chr1:23694556..23694584,-!p6@ZNF436!0.16!0.81!ZNF436;;chr12:80083544..80083558,-!p13@PAWR!0.16!0.81!PAWR;;chr16:69600209..69600234,+!p4@NFAT5!0.16!0.81!NFAT5;;chr15:80696606..80696633,+!p8@ARNT2!0.16!0.45!ARNT2;;chr17:41623716..41623727,-!p12@ETV4!0.16!0.45!ETV4;;chr18:19749353..19749367,+!p4@GATA6!0.16!0.45!GATA6;;chr18:55102959..55102985,+!p6@ONECUT2!0.16!0.45!ONECUT2;;chr18:56532079..56532095,+!p8@ZNF532!0.16!0.45!ZNF532;;chr19:19976620..19976631,+!p4@ZNF253!0.16!0.45!ZNF253;;chr5:124082548..124082571,-!p9@ZNF608!0.16!0.45!ZNF608;;chr5:134369848..134369853,-!p6@PITX1!0.16!0.45!PITX1;;chr5:134370033..134370042,-!p5@PITX1!0.16!0.45!PITX1;;chr5:322711..322730,+!p6@AHRR!0.16!0.45!AHRR;;chr6:1610178..1610190,+!p5@FOXC1!0.16!0.45!FOXC1;;chr6:45389985..45389996,+!p18@RUNX2!0.16!0.45!RUNX2;;chr7:27153443..27153450,-!p8@HOXA3!0.16!0.45!HOXA3;;chr7:73038839..73038862,-!p1@MLXIPL!0.16!0.45!MLXIPL;;chr7:96634850..96634874,+!p3@DLX6!0.16!0.45!DLX6;;chr9:115819058..115819082,-!p2@ZFP37!0.16!0.45!ZFP37;;chr9:14314946..14314983,-!p8@NFIB!0.16!0.45!NFIB;;chr22:46546390..46546401,+!p3@PPARA!0.16!0.45!PPARA;;chr2:178129746..178129769,-!p13@NFE2L2!0.16!0.45!NFE2L2;;chr2:45169193..45169219,+!p3@SIX3!0.16!0.45!SIX3;;chr2:63277978..63277995,+!p2@OTX1!0.16!0.45!OTX1;;chr2:66662396..66662407,+!p4@MEIS1!0.16!0.45!MEIS1;;chr3:24536364..24536373,-!p7@THRB!0.16!0.45!THRB;;chr4:83822246..83822277,+!p5@THAP9!0.16!0.45!THAP9;;chr10:131762589..131762601,-!p3@EBF3!0.16!0.45!EBF3;;chr10:28032548..28032559,-!p7@MKX!0.16!0.45!MKX;;chr10:8097295..8097320,+!p6@GATA3!0.16!0.45!GATA3;;chr11:12696579..12696611,+!p4@TEAD1!0.16!0.45!TEAD1;;chr11:16627528..16627550,-!p7@SOX6!0.16!0.45!SOX6;;chr11:34642612..34642646,+!p1@EHF!0.16!0.45!EHF;;chr11:85393886..85393913,-!p3@CREBZF!0.16!0.45!CREBZF;;chr12:54332608..54332636,+!p1@HOXC13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| ||
|ffid_belonging_in_development=CL:0000223 | |||
|fonse_cell_line=FF:0100794,FF:0101120 | |fonse_cell_line=FF:0100794,FF:0101120 | ||
|fonse_cell_line_closure=FF:0100794,FF:0101120 | |fonse_cell_line_closure=FF:0100794,FF:0101120 | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/tubular%2520adenocarcinoma%2520cell%2520line%253aSUIT-2.CNhs11883.10797-110I5.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/tubular%2520adenocarcinoma%2520cell%2520line%253aSUIT-2.CNhs11883.10797-110I5.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/tubular%2520adenocarcinoma%2520cell%2520line%253aSUIT-2.CNhs11883.10797-110I5.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/tubular%2520adenocarcinoma%2520cell%2520line%253aSUIT-2.CNhs11883.10797-110I5.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/tubular%2520adenocarcinoma%2520cell%2520line%253aSUIT-2.CNhs11883.10797-110I5.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10797-110I5 | |id=FF:10797-110I5 | ||
|is_a=CL:0000083;;DOID:4929;;EFO:0002091;;FF: | |is_a=CL:0000083;;DOID:4929;;EFO:0002091;;FF:0000210;;FF:0100167;;FF:0103493 | ||
|is_obsolete= | |||
|library_id=CNhs11883 | |||
|library_id_phase_based=2:CNhs11883 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10797 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10797 | |||
|name=tubular adenocarcinoma cell line:SUIT-2 | |name=tubular adenocarcinoma cell line:SUIT-2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11883,LSID830,release010,COMPLETED | |profile_hcage=CNhs11883,LSID830,release010,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.11803584085645,0,-0.0901372800145942,0.210009398900078,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0496986502686635,0,0,0.0186784233518874,0,0,0.375697568729068,0,0,0.203048122887011,0,0,0,0,0,0,0,0,0,0,0,0,-0.14297488282574,0.139587741518001,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.0373568467037749,0,0.00718757507868305,0,0.389576906498665,0,0,-0.059986780509322,0,0,0,0,0,0,0,0,0.0373568467037749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0736338973428368,0,0,0,0.206228012863879,-0.00230768620242572,0.0358766604257969,0,0,0.0373568467037749,0.063070800485833,0.283708615982947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0.211861471965739,0,0,-0.113497677575428,-0.543499503439916,0,0,0.103624360079764,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,0.063070800485833,0,0.0373568467037749,0,0,0,0,0,0,0,0,0,-0.1435545152058,0.0186784233518874,-0.26222474678627,0.113785796471201,0,0,-0.216654331880338,0,0.0717533208515938,0,0,0,0,0,0,0,-0.128119866952565,0,-0.0504125515893149,0,0,0,0,-0.0186252810838506,0.193637908459577,0,-0.00625570481657295,0.166830954961583,0,0,0,0,-0.0749324122420489,0,-0.0835226370899657,0.0209041917563468,0,-0.253119978444766,-0.0183556500774071,0,0,0.0186784233518874,-0.377966271236334,0.503376783746828,0,0,-0.004192243732398,0.137810629815035,0,0,-0.391044581551635,0.0373568467037749,0.272481329240907,0.213559206804416,0,0.16900676661441,0,0,0,0,0,0,0,0,0,0,0,-0.0388150434695491,0.207707539992655,0,0.0373568467037749,0.278353870942836,0.00500021683369645,0.199615302122279,0.0373568467037749,0.0376821095493152,0.84050005176764,0.100846189652167,-0.000236360562124504,-0.118727481941192,0.00392818031117958,-0.230636406158319,-0.0887939709968,0.600704116634193,-0.0546650939070932,-0.147401849371139,-0.189981719549847,0.119078278072293,0.0736338973428368,0.0252579617424588,0,0.155464818852939,-0.0373926425218134,-0.614001120492212,0.22336293815622,0.0373568467037749,0,0,-0.018425126436314,0,-0.0166268206088198,0.0774710560201451,0.072774552335397,0.022339621181647,0.30380593321678,-0.053570907307321,-0.0831876079519731,-0.0208541051047831,-0.296330301173055,0.0302124074638688,-0.34101924904193,0.0409607883842935,0,-0.0187626363893989,-0.0390230569366707,0.413326170129474,-0.0811300365070556,0,0.0151326775470035,0.00340905977422561,0.0186784233518874,-0.464934063360992,0.275631223342529,0.0373568467037749,0.0296961468045768,0.139041713823061,0,0.0373568467037749,0,0,0,0.233698232258386,0.131016553701661,0.137727474279415,0,-0.0575672905020385,0.0186784233518874,0.0425354984849583,0,0.073867484221626,0.0150962542661452,0,-0.0228586429324873,0,0.0033737539037222,0.0285642864782978,0.09231024265567,-0.00461537240485144,0.312136209023135,-0.0517115745983471,-0.0636115255319417,0.206228012863879,0.104639675010817,0.0242844405744577,-0.0881268324752877,0.0373568467037749,-0.136826089717265,0.188416346298249,0,0.115340055407913,0,0.154900631096832,0,-0.153874395771164,0,-0.345269993995247,0.0164631883354412,-0.121664224601985,0.0272004546846087,0,0.0126184804504413,-0.654815362584095,0,0.102783197061699,0.103579493683185,0.257300938994673,-0.0467427232548752,0.195883573288461,-0.0662258217352472,0.178391351681138,0,0.050556764911988,0,0,0.069919682419932,0.100528674901485,0.0717533208515938,-0.154059886755538,-0.206592785294372,-0.0695199045236711,-0.0786142267311591,0.0717533208515938,0,0.272111819627027,0.0201853027454848,0.0717533208515938,0.0888796614926761,-0.0431749897976372,0.329831958935187,-0.181573020635162,-0.102178793634818,-0.0727461490284585,0,0,0.10082610497766,0,0.0993382055149355,0,0,0.134497909288386,0,0,0.0186784233518874,0.0373568467037749,0.0280420351442497,0,0,0,0,0,0,0,0.052201253415108,-0.167608478037528,0,0.165981737545452,0,0.0373568467037749,0,0,0.0717533208515938,0.0317000365071947,0,0,0.0531496163269849,0.0312152494236189,0.0642074365024995,0,0,0,0,0.270845865187796,0.167346473740237,0,-0.0282383464178676,0.103624360079764,0.0358766604257969,0,0,-0.0143876689376175,0,0,0,0.0186784233518874,-0.0203736103498891,-0.198302420509525,0,0,0,0.268983982213297,0,0,0,0,0.0945877896753522,0,0,0,0,0.092477145513078,-0.0442250328430665,0,-0.00137943093741101,-0.195503999869163,0.352311556584864,0,0.103624360079764,-0.128031556600009,0,0.0461693605578151,0.165752705090766,-0.0200851246481002,0.298433249752598,0.0192976151841391,0,0,0,0,0,0,0.421524213300867,0,0,0.0373568467037749,0,0.0373568467037749,0,0.0373568467037749,0,0,0,0,-0.0878149806169322,0.0114003034212537,0.18722485217892,0,0,0,0,0,0,0.270811467470069,-0.144328936386727,0,0,0,0,0,0.0373568467037749,0,0,0.215432217991534,0,0,0,0,0,0.389576906498665,0,0.0373568467037749,0,0,0.348265476948563,0,0,-0.0901372800145942,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0377870656880917,-0.44438455319438,0,0.0373568467037749,0,0,0,0,0,-0.0876084460271707,0,0.0717533208515938,0,0,-0.0102600136292131,0,0,0,0.0824284673897634,0,0.11803584085645,0,0.0373568467037749,0,0,0,0.00766495270617726,0,0.0186784233518874,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.337914109537007,0,-0.0520322999339582,0.0687895951757709,0,0,0.154278984549349,0,0,0,0,0,0,0.0353173635664122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211861471965739,0,0,0,0,0,0.0358766604257969,0.0104992906845636,0,0,0,0,0,0,0,0.375697568729068,0,0,0.0551780536561828,0,0,0,0,0,0,0.0145253019261935,-0.1709295503818,0.0206981716596326,0,0,0.0717533208515938,0.10346978634085,0.0373568467037749,0,0,0,-0.0667773874189013,0,0,0,0,0,0,0,0,0.161106151723539,0,0,0,0,0,0,0,0,0.0373568467037749,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0373568467037749,-0.0496986502686635,0,0,0,0,0,0,0,0,0,0,0,0,0.128650469497336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717533208515938,0.0186784233518874,0,0,0,0,0,0,0.0033454834283584,0,0,0,0,0.0373568467037749,0,0,0,0,0,0,0,0,0,0,0,0.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| |||
|rna_box=110 | |rna_box=110 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=82.16869 | |rna_weight_ug=82.16869 | ||
|sample_age=73 | |sample_age=73 | ||
|sample_category=cell lines | |||
|sample_cell_catalog=jcrb1094 | |sample_cell_catalog=jcrb1094 | ||
|sample_cell_line=SUIT-2 | |sample_cell_line=SUIT-2 | ||
| Line 69: | Line 91: | ||
|sample_ethnicity=J | |sample_ethnicity=J | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.35731027898547e-234!GO:0005737;cytoplasm;5.24320897858566e-195!GO:0043231;intracellular membrane-bound organelle;7.34732077037462e-189!GO:0043227;membrane-bound organelle;8.78942383502049e-189!GO:0043226;organelle;5.01113228401517e-188!GO:0043229;intracellular organelle;1.87759002879698e-187!GO:0044444;cytoplasmic part;2.8220187782879e-148!GO:0044422;organelle part;1.38602463786125e-130!GO:0044446;intracellular organelle part;4.15140145743694e-129!GO:0032991;macromolecular complex;9.00118864199774e-89!GO:0044237;cellular metabolic process;9.00118864199774e-89!GO:0044238;primary metabolic process;9.43874323088466e-87!GO:0030529;ribonucleoprotein complex;1.42433340585912e-84!GO:0005739;mitochondrion;2.32286433630666e-78!GO:0043170;macromolecule metabolic process;9.29839874618325e-75!GO:0043233;organelle lumen;1.50224335096907e-71!GO:0031974;membrane-enclosed lumen;1.50224335096907e-71!GO:0003723;RNA binding;2.12082099544268e-71!GO:0044428;nuclear part;2.07099261334007e-65!GO:0005634;nucleus;3.74620063696017e-63!GO:0005515;protein binding;9.64378794534275e-62!GO:0031090;organelle membrane;1.90202545550616e-58!GO:0005840;ribosome;6.44796269379831e-54!GO:0006412;translation;2.86713628795299e-52!GO:0019538;protein metabolic process;4.94054753517324e-52!GO:0044429;mitochondrial part;2.03131464746624e-49!GO:0015031;protein transport;7.53675975739808e-48!GO:0033036;macromolecule localization;3.84787997562798e-47!GO:0003735;structural constituent of ribosome;6.97057812342616e-47!GO:0044267;cellular protein metabolic process;1.39009534061918e-46!GO:0044260;cellular macromolecule metabolic process;1.80652853919703e-46!GO:0006396;RNA processing;1.88118030669422e-46!GO:0009058;biosynthetic process;4.22546239977945e-46!GO:0044249;cellular biosynthetic process;6.93333841126663e-45!GO:0005829;cytosol;5.56878912820938e-44!GO:0045184;establishment of protein localization;2.09793873086614e-43!GO:0008104;protein localization;2.91800564792114e-43!GO:0016043;cellular component organization and biogenesis;7.69446447098656e-43!GO:0043234;protein complex;1.53995517782778e-42!GO:0031967;organelle envelope;4.43673694787776e-42!GO:0031975;envelope;5.60426861795513e-42!GO:0009059;macromolecule biosynthetic process;5.93000354353906e-41!GO:0031981;nuclear lumen;1.46428342607405e-40!GO:0043283;biopolymer metabolic process;3.95129123938075e-40!GO:0033279;ribosomal subunit;5.33834018525305e-40!GO:0010467;gene expression;4.34718792302301e-39!GO:0016071;mRNA metabolic process;1.23110914281834e-35!GO:0046907;intracellular transport;3.71851828099246e-34!GO:0008380;RNA splicing;5.46508659576609e-33!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.5376068108077e-32!GO:0005740;mitochondrial envelope;9.86286452316855e-31!GO:0006886;intracellular protein transport;8.83434472495241e-30!GO:0006397;mRNA processing;1.54884320988081e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.59603187778613e-29!GO:0031966;mitochondrial membrane;6.17168089260055e-29!GO:0019866;organelle inner membrane;2.07747186065104e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.41657274234928e-28!GO:0065003;macromolecular complex assembly;8.78671313683119e-27!GO:0005743;mitochondrial inner membrane;1.99341583476133e-26!GO:0000166;nucleotide binding;8.27782620983049e-26!GO:0006996;organelle organization and biogenesis;2.21101686818976e-25!GO:0012505;endomembrane system;8.31104505125399e-25!GO:0022607;cellular component assembly;1.13429269730516e-23!GO:0005654;nucleoplasm;1.18554146690221e-23!GO:0005783;endoplasmic reticulum;4.34153338653935e-23!GO:0005681;spliceosome;1.09402483439302e-22!GO:0031980;mitochondrial lumen;2.39676262857658e-22!GO:0005759;mitochondrial matrix;2.39676262857658e-22!GO:0006119;oxidative phosphorylation;2.68648023231791e-22!GO:0044445;cytosolic part;2.85636092286081e-22!GO:0043228;non-membrane-bound organelle;3.11107710318315e-22!GO:0043232;intracellular non-membrane-bound organelle;3.11107710318315e-22!GO:0051649;establishment of cellular localization;1.4357905236264e-21!GO:0051641;cellular localization;2.39091378652689e-21!GO:0015934;large ribosomal subunit;4.41446351757074e-21!GO:0016462;pyrophosphatase activity;9.69596292801274e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.21603016325662e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;1.69129878491123e-20!GO:0017111;nucleoside-triphosphatase activity;4.18460996901617e-20!GO:0006457;protein folding;4.42600789809751e-20!GO:0016874;ligase activity;5.7444299244683e-20!GO:0015935;small ribosomal subunit;6.34433400519686e-20!GO:0044455;mitochondrial membrane part;1.28374828694277e-19!GO:0003676;nucleic acid binding;1.93532426245069e-19!GO:0044451;nucleoplasm part;5.06502073327482e-19!GO:0005730;nucleolus;1.47310964704535e-18!GO:0006512;ubiquitin cycle;3.18333057769637e-18!GO:0044432;endoplasmic reticulum part;6.10854105051753e-18!GO:0006259;DNA metabolic process;6.85661366448001e-18!GO:0017076;purine nucleotide binding;8.91097021313403e-18!GO:0032553;ribonucleotide binding;1.2125158038665e-17!GO:0032555;purine ribonucleotide binding;1.2125158038665e-17!GO:0044265;cellular macromolecule catabolic process;1.65913469760042e-17!GO:0022618;protein-RNA complex assembly;1.7111254160595e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;3.57761194288427e-17!GO:0008134;transcription factor binding;4.41039505843209e-17!GO:0019941;modification-dependent protein catabolic process;6.85166184709126e-17!GO:0043632;modification-dependent macromolecule catabolic process;6.85166184709126e-17!GO:0005746;mitochondrial respiratory chain;8.42120560335149e-17!GO:0043285;biopolymer catabolic process;8.73819757445069e-17!GO:0044257;cellular protein catabolic process;1.15572929943098e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.18398693465199e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.35358416332956e-16!GO:0006605;protein targeting;2.59198831570579e-16!GO:0051186;cofactor metabolic process;2.59755386476354e-16!GO:0005794;Golgi apparatus;2.71508257060913e-16!GO:0043412;biopolymer modification;2.82318565261877e-16!GO:0044248;cellular catabolic process;2.84295227965635e-16!GO:0048770;pigment granule;3.73713252677409e-16!GO:0042470;melanosome;3.73713252677409e-16!GO:0016070;RNA metabolic process;4.74635844069705e-16!GO:0008135;translation factor activity, nucleic acid binding;5.44265475041083e-16!GO:0005761;mitochondrial ribosome;9.84431069957854e-16!GO:0000313;organellar ribosome;9.84431069957854e-16!GO:0009057;macromolecule catabolic process;1.48924985419629e-15!GO:0050136;NADH dehydrogenase (quinone) activity;2.16748874695796e-15!GO:0003954;NADH dehydrogenase activity;2.16748874695796e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.16748874695796e-15!GO:0000502;proteasome complex (sensu Eukaryota);3.35283220669056e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.28394271972187e-15!GO:0016192;vesicle-mediated transport;1.22515369530809e-14!GO:0006464;protein modification process;1.94744476429214e-14!GO:0048193;Golgi vesicle transport;1.94744476429214e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.94744476429214e-14!GO:0030163;protein catabolic process;1.94744476429214e-14!GO:0005789;endoplasmic reticulum membrane;7.07860814284559e-14!GO:0051082;unfolded protein binding;8.43995980478241e-14!GO:0005524;ATP binding;1.35537467756275e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.37853194542204e-13!GO:0042773;ATP synthesis coupled electron transport;1.37853194542204e-13!GO:0032559;adenyl ribonucleotide binding;1.75600908448183e-13!GO:0030554;adenyl nucleotide binding;1.76276248162514e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.31481863299064e-13!GO:0030964;NADH dehydrogenase complex (quinone);2.48264939234213e-13!GO:0045271;respiratory chain complex I;2.48264939234213e-13!GO:0005747;mitochondrial respiratory chain complex I;2.48264939234213e-13!GO:0006732;coenzyme metabolic process;3.16441711986766e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.50201320829901e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.18145160689186e-13!GO:0042254;ribosome biogenesis and assembly;1.39149224230608e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;3.03217196915837e-12!GO:0000375;RNA splicing, via transesterification reactions;3.03217196915837e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.03217196915837e-12!GO:0012501;programmed cell death;4.44638858031258e-12!GO:0003743;translation initiation factor activity;4.68483875678439e-12!GO:0005635;nuclear envelope;6.25746158190869e-12!GO:0043687;post-translational protein modification;6.67418481405287e-12!GO:0007049;cell cycle;7.94015593711188e-12!GO:0006915;apoptosis;9.85635520379172e-12!GO:0009055;electron carrier activity;2.11361208813211e-11!GO:0006366;transcription from RNA polymerase II promoter;2.65319046787208e-11!GO:0006913;nucleocytoplasmic transport;2.84103230854478e-11!GO:0031965;nuclear membrane;3.54389718503453e-11!GO:0006413;translational initiation;5.0914596888888e-11!GO:0051169;nuclear transport;5.10416912397969e-11!GO:0008219;cell death;6.18881117299696e-11!GO:0016265;death;6.18881117299696e-11!GO:0016887;ATPase activity;6.61867346762127e-11!GO:0003712;transcription cofactor activity;6.61867346762127e-11!GO:0006399;tRNA metabolic process;7.8110913240368e-11!GO:0006974;response to DNA damage stimulus;9.96173728466526e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.12006272717509e-10!GO:0042623;ATPase activity, coupled;1.27060027039214e-10!GO:0005768;endosome;1.42414648813909e-10!GO:0006446;regulation of translational initiation;2.11553352737393e-10!GO:0008639;small protein conjugating enzyme activity;2.58952458611145e-10!GO:0008565;protein transporter activity;3.85199622169172e-10!GO:0044453;nuclear membrane part;6.33162659252123e-10!GO:0004842;ubiquitin-protein ligase activity;6.38453424988079e-10!GO:0017038;protein import;8.11183046298706e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;9.29753612118774e-10!GO:0016740;transferase activity;1.3540946567279e-09!GO:0005793;ER-Golgi intermediate compartment;1.44552025321994e-09!GO:0009056;catabolic process;1.5800428341246e-09!GO:0019787;small conjugating protein ligase activity;1.61793819206206e-09!GO:0051188;cofactor biosynthetic process;2.04754349112516e-09!GO:0006461;protein complex assembly;2.33925706574332e-09!GO:0016604;nuclear body;2.70347780605955e-09!GO:0006163;purine nucleotide metabolic process;4.39678748714819e-09!GO:0016881;acid-amino acid ligase activity;4.98093416200492e-09!GO:0009259;ribonucleotide metabolic process;5.41751376590892e-09!GO:0004386;helicase activity;5.66212062299519e-09!GO:0006281;DNA repair;7.76885085550615e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;9.43091441879135e-09!GO:0004812;aminoacyl-tRNA ligase activity;9.43091441879135e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;9.43091441879135e-09!GO:0009719;response to endogenous stimulus;1.18487377120322e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.44166610423352e-08!GO:0009150;purine ribonucleotide metabolic process;1.59028945772902e-08!GO:0006164;purine nucleotide biosynthetic process;1.73462795455464e-08!GO:0043067;regulation of programmed cell death;2.48922090178964e-08!GO:0016563;transcription activator activity;2.68197040412824e-08!GO:0043038;amino acid activation;2.7579822654143e-08!GO:0006418;tRNA aminoacylation for protein translation;2.7579822654143e-08!GO:0043039;tRNA aminoacylation;2.7579822654143e-08!GO:0048523;negative regulation of cellular process;3.22336719061575e-08!GO:0042981;regulation of apoptosis;3.59724126416724e-08!GO:0015986;ATP synthesis coupled proton transport;4.04568314031358e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.04568314031358e-08!GO:0003924;GTPase activity;4.71150081726119e-08!GO:0009199;ribonucleoside triphosphate metabolic process;4.86832267189586e-08!GO:0022402;cell cycle process;4.98296883506785e-08!GO:0009260;ribonucleotide biosynthetic process;5.05938204046137e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.09862193673317e-08!GO:0006364;rRNA processing;5.15417282259178e-08!GO:0007005;mitochondrion organization and biogenesis;5.4226454112854e-08!GO:0005643;nuclear pore;5.68647718102123e-08!GO:0009152;purine ribonucleotide biosynthetic process;6.12376330222209e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;6.54467703745934e-08!GO:0009144;purine nucleoside triphosphate metabolic process;6.54467703745934e-08!GO:0008026;ATP-dependent helicase activity;6.54467703745934e-08!GO:0009142;nucleoside triphosphate biosynthetic process;7.3432692292778e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;7.3432692292778e-08!GO:0044440;endosomal part;7.45816984206547e-08!GO:0010008;endosome membrane;7.45816984206547e-08!GO:0009141;nucleoside triphosphate metabolic process;7.52742156575137e-08!GO:0044431;Golgi apparatus part;8.20076743168235e-08!GO:0009060;aerobic respiration;8.26683382308245e-08!GO:0016072;rRNA metabolic process;8.48180190568217e-08!GO:0009108;coenzyme biosynthetic process;8.5124340041529e-08!GO:0051246;regulation of protein metabolic process;8.69489079482736e-08!GO:0016491;oxidoreductase activity;9.30036272380971e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;9.8465674624327e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;9.8465674624327e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;1.09272068333696e-07!GO:0050794;regulation of cellular process;1.11049906974957e-07!GO:0030120;vesicle coat;1.11049906974957e-07!GO:0030662;coated vesicle membrane;1.11049906974957e-07!GO:0019829;cation-transporting ATPase activity;1.13090150662004e-07!GO:0016607;nuclear speck;1.36482268167499e-07!GO:0006403;RNA localization;1.5910332126838e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.64834476109122e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.72230394536785e-07!GO:0016568;chromatin modification;2.04966968034363e-07!GO:0050657;nucleic acid transport;2.04966968034363e-07!GO:0051236;establishment of RNA localization;2.04966968034363e-07!GO:0050658;RNA transport;2.04966968034363e-07!GO:0032446;protein modification by small protein conjugation;2.67007765251206e-07!GO:0016787;hydrolase activity;3.31002065679101e-07!GO:0016567;protein ubiquitination;3.49440816400809e-07!GO:0006323;DNA packaging;3.54249357003495e-07!GO:0003713;transcription coactivator activity;3.72648971243735e-07!GO:0051726;regulation of cell cycle;3.85933080655778e-07!GO:0015078;hydrogen ion transmembrane transporter activity;4.18194562136225e-07!GO:0065002;intracellular protein transport across a membrane;4.38162287626855e-07!GO:0046034;ATP metabolic process;4.46297752818902e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.21793490172995e-07!GO:0048475;coated membrane;5.3419624487146e-07!GO:0030117;membrane coat;5.3419624487146e-07!GO:0048519;negative regulation of biological process;5.480390410651e-07!GO:0000074;regulation of progression through cell cycle;5.480390410651e-07!GO:0006754;ATP biosynthetic process;5.480390410651e-07!GO:0006753;nucleoside phosphate metabolic process;5.480390410651e-07!GO:0006793;phosphorus metabolic process;5.480390410651e-07!GO:0006796;phosphate metabolic process;5.480390410651e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.70155637523298e-07!GO:0051276;chromosome organization and biogenesis;5.7568973870175e-07!GO:0043566;structure-specific DNA binding;6.31586112630559e-07!GO:0005667;transcription factor complex;6.82168625243273e-07!GO:0005770;late endosome;6.86158308233231e-07!GO:0045333;cellular respiration;7.2748448139633e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;9.80442130843219e-07!GO:0051170;nuclear import;1.18815562231632e-06!GO:0009117;nucleotide metabolic process;1.26893788497264e-06!GO:0005525;GTP binding;1.38441617063029e-06!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.66192420947019e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.75388300406947e-06!GO:0006606;protein import into nucleus;2.0040326609842e-06!GO:0031988;membrane-bound vesicle;2.6381962613132e-06!GO:0046930;pore complex;2.80795853466359e-06!GO:0005839;proteasome core complex (sensu Eukaryota);2.99474987985215e-06!GO:0045259;proton-transporting ATP synthase complex;3.05829689771877e-06!GO:0048522;positive regulation of cellular process;3.06192023346395e-06!GO:0016310;phosphorylation;3.22989565555026e-06!GO:0000245;spliceosome assembly;3.30381688044797e-06!GO:0051427;hormone receptor binding;3.47564934709334e-06!GO:0016469;proton-transporting two-sector ATPase complex;3.62149031902374e-06!GO:0016023;cytoplasmic membrane-bound vesicle;3.62149031902374e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.94294393498027e-06!GO:0051028;mRNA transport;3.97206962373744e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.99154380778249e-06!GO:0000139;Golgi membrane;4.46810713602927e-06!GO:0016853;isomerase activity;4.74106112463786e-06!GO:0045941;positive regulation of transcription;4.9135468570094e-06!GO:0000151;ubiquitin ligase complex;5.12063918862459e-06!GO:0005798;Golgi-associated vesicle;5.25441698866636e-06!GO:0045893;positive regulation of transcription, DNA-dependent;5.31139737221884e-06!GO:0003697;single-stranded DNA binding;5.79131728073721e-06!GO:0008654;phospholipid biosynthetic process;5.83370545967753e-06!GO:0006752;group transfer coenzyme metabolic process;5.91650269738896e-06!GO:0005762;mitochondrial large ribosomal subunit;6.39016585512061e-06!GO:0000315;organellar large ribosomal subunit;6.39016585512061e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;6.81999437421031e-06!GO:0035257;nuclear hormone receptor binding;7.92498068741249e-06!GO:0016564;transcription repressor activity;8.65210246471596e-06!GO:0006091;generation of precursor metabolites and energy;1.05990432613467e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.05990432613467e-05!GO:0015399;primary active transmembrane transporter activity;1.05990432613467e-05!GO:0006099;tricarboxylic acid cycle;1.05990432613467e-05!GO:0046356;acetyl-CoA catabolic process;1.05990432613467e-05!GO:0016779;nucleotidyltransferase activity;1.09629267509851e-05!GO:0006260;DNA replication;1.12411830732304e-05!GO:0006613;cotranslational protein targeting to membrane;1.15698885374037e-05!GO:0000278;mitotic cell cycle;1.23261900895339e-05!GO:0006084;acetyl-CoA metabolic process;1.24726219173715e-05!GO:0006082;organic acid metabolic process;1.33086641715108e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.48502731794135e-05!GO:0019752;carboxylic acid metabolic process;1.51443930743182e-05!GO:0004298;threonine endopeptidase activity;1.58688285635542e-05!GO:0043069;negative regulation of programmed cell death;1.71346632141635e-05!GO:0009109;coenzyme catabolic process;1.93154383082353e-05!GO:0045786;negative regulation of progression through cell cycle;1.93990183032592e-05!GO:0048471;perinuclear region of cytoplasm;1.9584506467732e-05!GO:0005788;endoplasmic reticulum lumen;1.99320850465229e-05!GO:0005773;vacuole;2.01682172691724e-05!GO:0032561;guanyl ribonucleotide binding;2.03814866015617e-05!GO:0019001;guanyl nucleotide binding;2.03814866015617e-05!GO:0031982;vesicle;2.04870713700118e-05!GO:0051187;cofactor catabolic process;2.27994563144166e-05!GO:0000314;organellar small ribosomal subunit;3.11581030978287e-05!GO:0005763;mitochondrial small ribosomal subunit;3.11581030978287e-05!GO:0031410;cytoplasmic vesicle;3.23392380796775e-05!GO:0045454;cell redox homeostasis;3.23392380796775e-05!GO:0005769;early endosome;3.67121990800492e-05!GO:0019867;outer membrane;3.80718703623399e-05!GO:0031968;organelle outer membrane;4.25000442631895e-05!GO:0043066;negative regulation of apoptosis;4.56052024156663e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.17659714121641e-05!GO:0043021;ribonucleoprotein binding;5.38276254594273e-05!GO:0051789;response to protein stimulus;5.61006423578006e-05!GO:0006986;response to unfolded protein;5.61006423578006e-05!GO:0031324;negative regulation of cellular metabolic process;6.04185033565299e-05!GO:0003724;RNA helicase activity;6.37752446717644e-05!GO:0005694;chromosome;7.18850877952738e-05!GO:0005741;mitochondrial outer membrane;9.18409246671014e-05!GO:0000323;lytic vacuole;9.61168882528434e-05!GO:0005764;lysosome;9.61168882528434e-05!GO:0019899;enzyme binding;9.6503463797818e-05!GO:0050789;regulation of biological process;0.000101825513637124!GO:0009892;negative regulation of metabolic process;0.000104567682091126!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000132247091767054!GO:0003690;double-stranded DNA binding;0.000136992779148758!GO:0046474;glycerophospholipid biosynthetic process;0.00015214629371735!GO:0031252;leading edge;0.000154564581407779!GO:0016859;cis-trans isomerase activity;0.000156043950874211!GO:0065009;regulation of a molecular function;0.000165220476821624!GO:0007264;small GTPase mediated signal transduction;0.000170666070636918!GO:0007243;protein kinase cascade;0.000180527111949405!GO:0006916;anti-apoptosis;0.000182793762872353!GO:0043492;ATPase activity, coupled to movement of substances;0.000184302687437363!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000195376806139393!GO:0043623;cellular protein complex assembly;0.000209746186784339!GO:0003714;transcription corepressor activity;0.000238599878806457!GO:0006612;protein targeting to membrane;0.000252602954884747!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00026716000917527!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000282778814511616!GO:0042802;identical protein binding;0.000308073679350649!GO:0003729;mRNA binding;0.000372053797630281!GO:0043681;protein import into mitochondrion;0.000392931355649565!GO:0030867;rough endoplasmic reticulum membrane;0.000403567094561164!GO:0008632;apoptotic program;0.000412228387460046!GO:0048518;positive regulation of biological process;0.00041232453392044!GO:0050662;coenzyme binding;0.000428396170204819!GO:0006402;mRNA catabolic process;0.000452843854458364!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000466235901589581!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000468836537724569!GO:0003899;DNA-directed RNA polymerase activity;0.000479287157057341!GO:0065004;protein-DNA complex assembly;0.000507468124564448!GO:0051287;NAD binding;0.000518413158338676!GO:0045045;secretory pathway;0.000533203198896379!GO:0006333;chromatin assembly or disassembly;0.000560144738950234!GO:0006414;translational elongation;0.000562935769647297!GO:0006650;glycerophospholipid metabolic process;0.000562935769647297!GO:0008033;tRNA processing;0.000570330539657938!GO:0009893;positive regulation of metabolic process;0.000578519710532759!GO:0006520;amino acid metabolic process;0.000597198598395184!GO:0004177;aminopeptidase activity;0.000598102363542503!GO:0019222;regulation of metabolic process;0.000603948817231481!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000639931562170391!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.000642191007531829!GO:0004576;oligosaccharyl transferase activity;0.000651322453838713!GO:0000785;chromatin;0.00065701341775039!GO:0005048;signal sequence binding;0.000660362645902348!GO:0006626;protein targeting to mitochondrion;0.000662808811111294!GO:0008250;oligosaccharyl transferase complex;0.000667257852897437!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000673174973123589!GO:0046467;membrane lipid biosynthetic process;0.000704052480905516!GO:0031072;heat shock protein binding;0.000718958809668391!GO:0033116;ER-Golgi intermediate compartment membrane;0.000772028456650591!GO:0005885;Arp2/3 protein complex;0.000784958047198525!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000785823118184183!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000860812249652093!GO:0051168;nuclear export;0.000890173937789967!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000951571765228302!GO:0016044;membrane organization and biogenesis;0.00103738303416783!GO:0030133;transport vesicle;0.00103738303416783!GO:0006891;intra-Golgi vesicle-mediated transport;0.00104147223932263!GO:0015980;energy derivation by oxidation of organic compounds;0.00104474334304804!GO:0009165;nucleotide biosynthetic process;0.00108587953015013!GO:0051920;peroxiredoxin activity;0.0011103834930888!GO:0005905;coated pit;0.00112534905373542!GO:0000049;tRNA binding;0.00123164771309287!GO:0046489;phosphoinositide biosynthetic process;0.00128446147770581!GO:0044452;nucleolar part;0.00130249856257601!GO:0030659;cytoplasmic vesicle membrane;0.0013125927130728!GO:0044427;chromosomal part;0.00134351591676426!GO:0006839;mitochondrial transport;0.00135122791274748!GO:0030176;integral to endoplasmic reticulum membrane;0.00145833919202548!GO:0015630;microtubule cytoskeleton;0.00148846241709962!GO:0008361;regulation of cell size;0.0014913823197314!GO:0008186;RNA-dependent ATPase activity;0.0014933960679117!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00153209367596593!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00153209367596593!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00153209367596593!GO:0005813;centrosome;0.00160053357871855!GO:0016481;negative regulation of transcription;0.001639382435212!GO:0001558;regulation of cell growth;0.00167424946734604!GO:0006807;nitrogen compound metabolic process;0.00169144477169851!GO:0048500;signal recognition particle;0.00200841609605272!GO:0030118;clathrin coat;0.00201949662815896!GO:0008637;apoptotic mitochondrial changes;0.00205149123966806!GO:0030658;transport vesicle membrane;0.0021319170949393!GO:0006984;ER-nuclear signaling pathway;0.00213936665294119!GO:0004674;protein serine/threonine kinase activity;0.0022354037688075!GO:0016049;cell growth;0.0022354037688075!GO:0048037;cofactor binding;0.00239015858754877!GO:0018196;peptidyl-asparagine modification;0.00239015858754877!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00239015858754877!GO:0031325;positive regulation of cellular metabolic process;0.00242523028416977!GO:0046483;heterocycle metabolic process;0.00242842640086657!GO:0031902;late endosome membrane;0.00245013809043216!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00253090868228561!GO:0008610;lipid biosynthetic process;0.00257410547260549!GO:0044433;cytoplasmic vesicle part;0.00259781249087758!GO:0016741;transferase activity, transferring one-carbon groups;0.00262694149575483!GO:0046983;protein dimerization activity;0.00262694149575483!GO:0016272;prefoldin complex;0.00277333862828627!GO:0030663;COPI coated vesicle membrane;0.00277595125826712!GO:0030126;COPI vesicle coat;0.00277595125826712!GO:0008168;methyltransferase activity;0.00282584889899755!GO:0035258;steroid hormone receptor binding;0.00300610994301794!GO:0006261;DNA-dependent DNA replication;0.00306755359239699!GO:0006595;polyamine metabolic process;0.00312737025685844!GO:0051252;regulation of RNA metabolic process;0.00315965159375904!GO:0044262;cellular carbohydrate metabolic process;0.0032990274364242!GO:0007006;mitochondrial membrane organization and biogenesis;0.00338191301993451!GO:0016363;nuclear matrix;0.00349981807582691!GO:0005774;vacuolar membrane;0.00352910251314062!GO:0006401;RNA catabolic process;0.00353281077421927!GO:0009116;nucleoside metabolic process;0.00353281077421927!GO:0016301;kinase activity;0.00353866100205244!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00353866100205244!GO:0005791;rough endoplasmic reticulum;0.00355051432097403!GO:0012506;vesicle membrane;0.00357252287270972!GO:0005815;microtubule organizing center;0.00379047526372325!GO:0022403;cell cycle phase;0.00391440788562359!GO:0004004;ATP-dependent RNA helicase activity;0.00393773820900944!GO:0043488;regulation of mRNA stability;0.00406866305794464!GO:0043487;regulation of RNA stability;0.00406866305794464!GO:0006892;post-Golgi vesicle-mediated transport;0.00412939720952991!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00433227887597972!GO:0008629;induction of apoptosis by intracellular signals;0.00436428908018454!GO:0009967;positive regulation of signal transduction;0.00437373261475494!GO:0006818;hydrogen transport;0.0043792434495808!GO:0016197;endosome transport;0.00441563989815853!GO:0008234;cysteine-type peptidase activity;0.00451227318228147!GO:0015992;proton transport;0.0045523189409226!GO:0009112;nucleobase metabolic process;0.0045597971102918!GO:0030036;actin cytoskeleton organization and biogenesis;0.00466029938522988!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00467300609747868!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00467300609747868!GO:0030137;COPI-coated vesicle;0.00468969857103491!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00485871811874616!GO:0045047;protein targeting to ER;0.00485871811874616!GO:0008312;7S RNA binding;0.00494816317300092!GO:0000096;sulfur amino acid metabolic process;0.00495963218917107!GO:0006519;amino acid and derivative metabolic process;0.00497982276091642!GO:0030660;Golgi-associated vesicle membrane;0.00501021270169208!GO:0006672;ceramide metabolic process;0.00511638940055168!GO:0048468;cell development;0.00512277543991582!GO:0005684;U2-dependent spliceosome;0.00543423454713906!GO:0050790;regulation of catalytic activity;0.00552315479140554!GO:0030384;phosphoinositide metabolic process;0.00552984062239448!GO:0003746;translation elongation factor activity;0.00553640255327801!GO:0006352;transcription initiation;0.00560133909064207!GO:0030132;clathrin coat of coated pit;0.00576387011005187!GO:0009308;amine metabolic process;0.00593091243874161!GO:0048487;beta-tubulin binding;0.00610298293089117!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00616490702001279!GO:0000059;protein import into nucleus, docking;0.00627135278774268!GO:0019843;rRNA binding;0.00629278909650265!GO:0043065;positive regulation of apoptosis;0.00637271151132164!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.00656723478076508!GO:0051087;chaperone binding;0.0068796661088065!GO:0043022;ribosome binding;0.00689653550198945!GO:0005637;nuclear inner membrane;0.00690959239138126!GO:0030125;clathrin vesicle coat;0.00699538950631413!GO:0030665;clathrin coated vesicle membrane;0.00699538950631413!GO:0051329;interphase of mitotic cell cycle;0.00705987809398603!GO:0000087;M phase of mitotic cell cycle;0.00719073516621042!GO:0008022;protein C-terminus binding;0.00728168482306661!GO:0003702;RNA polymerase II transcription factor activity;0.00729202352912777!GO:0051539;4 iron, 4 sulfur cluster binding;0.00755594415458897!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00759274594292368!GO:0006118;electron transport;0.00766222587524701!GO:0006338;chromatin remodeling;0.00779086489789027!GO:0043068;positive regulation of programmed cell death;0.0079102388699552!GO:0005765;lysosomal membrane;0.00806289729700986!GO:0051128;regulation of cellular component organization and biogenesis;0.00813217775416281!GO:0007067;mitosis;0.00841749261694059!GO:0030134;ER to Golgi transport vesicle;0.00861102062913965!GO:0046519;sphingoid metabolic process;0.00902184137808295!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.00902184137808295!GO:0044437;vacuolar part;0.00906750367446914!GO:0030027;lamellipodium;0.00916364628791737!GO:0040008;regulation of growth;0.00942099775781253!GO:0008652;amino acid biosynthetic process;0.00964307733209625!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.00967891116619844!GO:0030521;androgen receptor signaling pathway;0.0098388746021956!GO:0006383;transcription from RNA polymerase III promoter;0.0098388746021956!GO:0043284;biopolymer biosynthetic process;0.00985677093552602!GO:0006302;double-strand break repair;0.00985677093552602!GO:0007030;Golgi organization and biogenesis;0.00985677093552602!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0099537992018245!GO:0045792;negative regulation of cell size;0.0102772781250593!GO:0031901;early endosome membrane;0.0105503406141394!GO:0022890;inorganic cation transmembrane transporter activity;0.0106692495490984!GO:0030119;AP-type membrane coat adaptor complex;0.0113954641697968!GO:0004860;protein kinase inhibitor activity;0.0116701274017089!GO:0009081;branched chain family amino acid metabolic process;0.0117192573024368!GO:0046822;regulation of nucleocytoplasmic transport;0.0121629016355886!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0124585355577996!GO:0016251;general RNA polymerase II transcription factor activity;0.012459084601853!GO:0030308;negative regulation of cell growth;0.0126320007762087!GO:0051301;cell division;0.0129584334579334!GO:0006740;NADPH regeneration;0.0136372994324532!GO:0006098;pentose-phosphate shunt;0.0136372994324532!GO:0065007;biological regulation;0.0136707606164556!GO:0006506;GPI anchor biosynthetic process;0.013827879689763!GO:0046966;thyroid hormone receptor binding;0.0138680465956839!GO:0030029;actin filament-based process;0.0142741080433194!GO:0015631;tubulin binding;0.0144713575655045!GO:0030127;COPII vesicle coat;0.0145844405320727!GO:0012507;ER to Golgi transport vesicle membrane;0.0145844405320727!GO:0006497;protein amino acid lipidation;0.0146418690907241!GO:0007040;lysosome organization and biogenesis;0.0147774650534666!GO:0030503;regulation of cell redox homeostasis;0.0150354282637415!GO:0030880;RNA polymerase complex;0.0152722490309384!GO:0031625;ubiquitin protein ligase binding;0.0152722490309384!GO:0005832;chaperonin-containing T-complex;0.0152722490309384!GO:0006749;glutathione metabolic process;0.0153648627841461!GO:0008180;signalosome;0.0154219145922307!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0157754367470131!GO:0004680;casein kinase activity;0.0158545716779283!GO:0007010;cytoskeleton organization and biogenesis;0.0158545716779283!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0159370502069803!GO:0015002;heme-copper terminal oxidase activity;0.0159370502069803!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0159370502069803!GO:0004129;cytochrome-c oxidase activity;0.0159370502069803!GO:0017166;vinculin binding;0.016027024137013!GO:0006505;GPI anchor metabolic process;0.0160364297663499!GO:0001889;liver development;0.0161838552753605!GO:0030131;clathrin adaptor complex;0.0161927035897662!GO:0006405;RNA export from nucleus;0.0163624529301048!GO:0006643;membrane lipid metabolic process;0.0165072121182753!GO:0031529;ruffle organization and biogenesis;0.0176020275179312!GO:0007033;vacuole organization and biogenesis;0.0178725786248794!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0180668853113183!GO:0000339;RNA cap binding;0.0181118421359715!GO:0003711;transcription elongation regulator activity;0.0182966867810291!GO:0006417;regulation of translation;0.0183638200566004!GO:0006509;membrane protein ectodomain proteolysis;0.0187942699631098!GO:0033619;membrane protein proteolysis;0.0187942699631098!GO:0031323;regulation of cellular metabolic process;0.0193897968226958!GO:0000287;magnesium ion binding;0.0194378932977663!GO:0051101;regulation of DNA binding;0.0203294879802491!GO:0033673;negative regulation of kinase activity;0.0214314716074711!GO:0006469;negative regulation of protein kinase activity;0.0214314716074711!GO:0051338;regulation of transferase activity;0.0214314716074711!GO:0005869;dynactin complex;0.0214314716074711!GO:0007050;cell cycle arrest;0.021550299459915!GO:0003682;chromatin binding;0.0215849754126279!GO:0008139;nuclear localization sequence binding;0.0216949066383172!GO:0005758;mitochondrial intermembrane space;0.0229725194249345!GO:0006144;purine base metabolic process;0.0229987841226909!GO:0016791;phosphoric monoester hydrolase activity;0.0232099581088162!GO:0006897;endocytosis;0.0234201847905111!GO:0010324;membrane invagination;0.0234201847905111!GO:0000118;histone deacetylase complex;0.0235340849974351!GO:0006376;mRNA splice site selection;0.0238128855561298!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0238128855561298!GO:0050681;androgen receptor binding;0.0240964316721775!GO:0051325;interphase;0.0242596169816478!GO:0001836;release of cytochrome c from mitochondria;0.0250116145605103!GO:0032940;secretion by cell;0.0251231702971557!GO:0003678;DNA helicase activity;0.0257323485191956!GO:0040029;regulation of gene expression, epigenetic;0.0258961127532128!GO:0007242;intracellular signaling cascade;0.0260715424945136!GO:0019318;hexose metabolic process;0.0262216476322744!GO:0045926;negative regulation of growth;0.026499595667255!GO:0051052;regulation of DNA metabolic process;0.0265067206414889!GO:0051540;metal cluster binding;0.0265847836672645!GO:0051536;iron-sulfur cluster binding;0.0265847836672645!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0267530157039051!GO:0000428;DNA-directed RNA polymerase complex;0.0267530157039051!GO:0008092;cytoskeletal protein binding;0.0270306920077438!GO:0006400;tRNA modification;0.0277993764785944!GO:0006007;glucose catabolic process;0.0283345554801546!GO:0009966;regulation of signal transduction;0.0283345554801546!GO:0009451;RNA modification;0.0283407393718567!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0287654315681418!GO:0010257;NADH dehydrogenase complex assembly;0.0287654315681418!GO:0033108;mitochondrial respiratory chain complex assembly;0.0287654315681418!GO:0006635;fatty acid beta-oxidation;0.029237633233479!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.029237633233479!GO:0008097;5S rRNA binding;0.0295095647899498!GO:0005996;monosaccharide metabolic process;0.0297380554683169!GO:0044255;cellular lipid metabolic process;0.030142594087215!GO:0003684;damaged DNA binding;0.0304080373317345!GO:0051059;NF-kappaB binding;0.0306393221567832!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0307248907738387!GO:0008538;proteasome activator activity;0.0307248907738387!GO:0005862;muscle thin filament tropomyosin;0.0307429035621683!GO:0030508;thiol-disulfide exchange intermediate activity;0.0317289173991226!GO:0030518;steroid hormone receptor signaling pathway;0.0320648912991664!GO:0017134;fibroblast growth factor binding;0.0322411943903311!GO:0016126;sterol biosynthetic process;0.0322411943903311!GO:0044438;microbody part;0.0328360725921631!GO:0044439;peroxisomal part;0.0328360725921631!GO:0007034;vacuolar transport;0.0328360725921631!GO:0051348;negative regulation of transferase activity;0.0328393723497907!GO:0007265;Ras protein signal transduction;0.0336238671308009!GO:0006596;polyamine biosynthetic process;0.0344961903506174!GO:0006611;protein export from nucleus;0.0347500101085175!GO:0022406;membrane docking;0.0350205790676291!GO:0048278;vesicle docking;0.0350205790676291!GO:0006289;nucleotide-excision repair;0.035683629395075!GO:0005777;peroxisome;0.035683629395075!GO:0042579;microbody;0.035683629395075!GO:0006695;cholesterol biosynthetic process;0.0357957261974002!GO:0032508;DNA duplex unwinding;0.036002806847384!GO:0032392;DNA geometric change;0.036002806847384!GO:0016408;C-acyltransferase activity;0.0360498123089191!GO:0030968;unfolded protein response;0.0361935975535892!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0361935975535892!GO:0031124;mRNA 3'-end processing;0.0361935975535892!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0361935975535892!GO:0045892;negative regulation of transcription, DNA-dependent;0.0361935975535892!GO:0006778;porphyrin metabolic process;0.0361935975535892!GO:0033013;tetrapyrrole metabolic process;0.0361935975535892!GO:0019783;small conjugating protein-specific protease activity;0.0364448084815858!GO:0030140;trans-Golgi network transport vesicle;0.0364448084815858!GO:0042158;lipoprotein biosynthetic process;0.0365720210358172!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0365888848049679!GO:0043281;regulation of caspase activity;0.0368136316177221!GO:0051090;regulation of transcription factor activity;0.0369493491480432!GO:0005669;transcription factor TFIID complex;0.0370764254918875!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0373147697652529!GO:0043189;H4/H2A histone acetyltransferase complex;0.0374280941705148!GO:0043549;regulation of kinase activity;0.0374280941705148!GO:0050811;GABA receptor binding;0.0383751108053091!GO:0003725;double-stranded RNA binding;0.0386662398167263!GO:0006979;response to oxidative stress;0.0392298615143456!GO:0008601;protein phosphatase type 2A regulator activity;0.0392491206986376!GO:0030433;ER-associated protein catabolic process;0.039477221906841!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.039477221906841!GO:0006767;water-soluble vitamin metabolic process;0.0395455341944401!GO:0006917;induction of apoptosis;0.0402674593265205!GO:0031301;integral to organelle membrane;0.0405272418277543!GO:0006066;alcohol metabolic process;0.0406480390084656!GO:0031371;ubiquitin conjugating enzyme complex;0.0407713006559954!GO:0008047;enzyme activator activity;0.0412567436347435!GO:0006733;oxidoreduction coenzyme metabolic process;0.0417713892401226!GO:0006904;vesicle docking during exocytosis;0.0417713892401226!GO:0004843;ubiquitin-specific protease activity;0.0422972406612888!GO:0031970;organelle envelope lumen;0.0423157070841001!GO:0005784;translocon complex;0.0425210880128835!GO:0005854;nascent polypeptide-associated complex;0.042869880895697!GO:0004300;enoyl-CoA hydratase activity;0.0436809140832451!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0441297790551549!GO:0006779;porphyrin biosynthetic process;0.0442537533224602!GO:0033014;tetrapyrrole biosynthetic process;0.0442537533224602!GO:0000209;protein polyubiquitination;0.0448707693332242!GO:0019210;kinase inhibitor activity;0.0450351807051398!GO:0008320;protein transmembrane transporter activity;0.045061862427733!GO:0030911;TPR domain binding;0.0463032287288645!GO:0031497;chromatin assembly;0.0469030380461912!GO:0006458;'de novo' protein folding;0.0469030380461912!GO:0051084;'de novo' posttranslational protein folding;0.0469030380461912!GO:0000082;G1/S transition of mitotic cell cycle;0.0476909236297995!GO:0018193;peptidyl-amino acid modification;0.0477264649827092!GO:0001726;ruffle;0.047793016045458!GO:0009303;rRNA transcription;0.0481838658625156!GO:0006607;NLS-bearing substrate import into nucleus;0.0482896209825284!GO:0003756;protein disulfide isomerase activity;0.0483988583692544!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0483988583692544!GO:0031903;microbody membrane;0.0484272182178487!GO:0005778;peroxisomal membrane;0.0484272182178487!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0489728062575033!GO:0008286;insulin receptor signaling pathway;0.0489728062575033!GO:0047485;protein N-terminus binding;0.0492307974176287!GO:0008017;microtubule binding;0.0492715643188003!GO:0022884;macromolecule transmembrane transporter activity;0.0495030656087181!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0495030656087181!GO:0012502;induction of programmed cell death;0.049689282765349!GO:0016485;protein processing;0.0498524163736963 | |||
|sample_id=10797 | |sample_id=10797 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=pancreas | |sample_tissue=pancreas | ||
|top_motifs=FOXQ1:2.52785603827;HOX{A6,A7,B6,B7}:1.65031972021;HNF1A:1.59496065942;FOXD3:1.4696798492;HNF4A_NR2F1,2:1.41214187562;ONECUT1,2:1.0833722397;bHLH_family:0.976959073776;TBX4,5:0.933835313005;BPTF:0.92738432844;RORA:0.839323690963;ZEB1:0.775725644499;NR6A1:0.757710909689;TFAP2B:0.750281398571;LHX3,4:0.715558074501;ZNF148:0.711803293322;ELK1,4_GABP{A,B1}:0.628034884816;POU6F1:0.62526577345;FOX{D1,D2}:0.606838060431;XCPE1{core}:0.603247682997;SP1:0.584360679094;ADNP_IRX_SIX_ZHX:0.575913585893;ZBTB16:0.56292721521;IKZF2:0.556520174632;AIRE:0.548665441678;ALX1:0.547703259343;PPARG:0.489027895368;PAX8:0.480514832162;TEF:0.436694301881;NKX6-1,2:0.436152183008;LMO2:0.430990914466;MYOD1:0.429862043665;MED-1{core}:0.423202802944;TFAP2{A,C}:0.420980698974;SNAI1..3:0.407585944019;TFCP2:0.399483904678;SOX5:0.331619573317;NANOG:0.326490228383;PAX4:0.318152225426;YY1:0.309125423987;PRRX1,2:0.28340467778;EP300:0.279296299431;EGR1..3:0.26932498777;MAZ:0.259065645702;NFIX:0.258043404971;TEAD1:0.243431802465;EVI1:0.230610497384;GLI1..3:0.224344366286;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.218762822253;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.212606099082;ZFP161:0.20864749034;ESR1:0.191468669021;FOX{I1,J2}:0.155816573524;AHR_ARNT_ARNT2:0.15123399845;GTF2A1,2:0.146151505429;BREu{core}:0.145623680517;CRX:0.13275535852;ZBTB6:0.121890263191;FOXM1:0.100165924962;CDC5L:0.0931886161807;PITX1..3:0.0856031627512;ELF1,2,4:0.0813262674301;FOXA2:0.0756255704979;POU1F1:0.0745586739172;PATZ1:0.0695290046446;HIF1A:0.0673792955931;NKX3-2:0.0599183487772;BACH2:0.0541584356077;HIC1:0.0530153085203;FOS_FOS{B,L1}_JUN{B,D}:0.0522163843792;MTF1:0.0402035189965;GZF1:0.039382202215;OCT4_SOX2{dimer}:0.0369903377211;NFE2:0.0357544025524;PAX5:0.0195707434207;RFX1:0.00461028891958;HSF1,2:0.00205135339096;GATA6:-0.0113005822105;IRF1,2:-0.0144253135686;HES1:-0.0160448658489;IRF7:-0.0208569953493;CDX1,2,4:-0.0223805072421;MTE{core}:-0.0243507118831;TOPORS:-0.0276409529564;SOX2:-0.0326511568333;NKX2-1,4:-0.0445097845631;TLX2:-0.0454439282427;POU2F1..3:-0.0481830143845;FOXP1:-0.0734115205327;FOX{F1,F2,J1}:-0.0967220669048;NFE2L2:-0.0974255344731;ZNF143:-0.102923221617;PBX1:-0.105523221733;KLF4:-0.115482503415;CEBPA,B_DDIT3:-0.136157120146;MYBL2:-0.145361972697;NR1H4:-0.146120498652;SREBF1,2:-0.156917727994;CUX2:-0.166867329916;LEF1_TCF7_TCF7L1,2:-0.171153714981;RREB1:-0.189975149598;FOXP3:-0.211583239199;NRF1:-0.239647854953;HLF:-0.244552967363;FOSL2:-0.259096280085;UFEwm:-0.267805595043;NR3C1:-0.271235895016;STAT5{A,B}:-0.27265454142;TP53:-0.278895034574;FOXO1,3,4:-0.280812142617;NHLH1,2:-0.281037750091;NFKB1_REL_RELA:-0.285148835815;EN1,2:-0.2852091114;FOXN1:-0.287227990925;SPI1:-0.305228659509;TLX1..3_NFIC{dimer}:-0.308766587371;PDX1:-0.308818171937;GTF2I:-0.30931153766;RFX2..5_RFXANK_RFXAP:-0.309723351057;SPZ1:-0.321959810739;PAX2:-0.331165700026;ETS1,2:-0.351026550149;NKX2-3_NKX2-5:-0.356730764383;NANOG{mouse}:-0.359366930786;STAT2,4,6:-0.367652519652;ATF5_CREB3:-0.368776927528;MEF2{A,B,C,D}:-0.369241525941;ZNF423:-0.371366194547;EBF1:-0.378366501245;REST:-0.386267459614;RXR{A,B,G}:-0.391345830504;ATF4:-0.393349941328;ALX4:-0.395201582353;SPIB:-0.396725592239;MZF1:-0.412494048331;MYB:-0.418041379386;SOX17:-0.43579943961;SOX{8,9,10}:-0.436711885421;GCM1,2:-0.438819573265;ZIC1..3:-0.440515357183;NKX3-1:-0.467607607404;POU5F1:-0.472697098175;TFDP1:-0.476563227477;ARID5B:-0.491906468091;PRDM1:-0.505318629329;HOX{A5,B5}:-0.511207436103;DMAP1_NCOR{1,2}_SMARC:-0.511894564247;SRF:-0.51825889448;ATF2:-0.5234672093;ZNF384:-0.529640870422;NFE2L1:-0.536229836174;ESRRA:-0.544565285565;VSX1,2:-0.550592618922;IKZF1:-0.557440182201;MYFfamily:-0.564426112257;E2F1..5:-0.568539521721;PAX3,7:-0.575224499959;CREB1:-0.595256519192;PAX1,9:-0.599332408387;GFI1B:-0.626461176403;TGIF1:-0.627163335414;ATF6:-0.628370624954;TAL1_TCF{3,4,12}:-0.661848044433;TBP:-0.690202180595;AR:-0.702788389166;NFIL3:-0.710454726815;STAT1,3:-0.741888132379;NR5A1,2:-0.750902800402;JUN:-0.764280955022;GATA4:-0.780845456686;RBPJ:-0.796510863099;DBP:-0.798203525224;HOX{A4,D4}:-0.804584914103;GFI1:-0.806379413664;NFATC1..3:-0.817431969827;HMGA1,2:-0.821189134035;RUNX1..3:-0.847618624688;NFY{A,B,C}:-0.876742969513;PAX6:-0.901171126024;TFAP4:-0.923439617018;NKX2-2,8:-0.93183914745;MAFB:-0.939225202943;XBP1:-0.94158632295;RXRA_VDR{dimer}:-0.982784398018;HBP1_HMGB_SSRP1_UBTF:-1.00151951011;ZNF238:-1.02373641405;FOXL1:-1.0415926045;HOXA9_MEIS1:-1.13328294644;HAND1,2:-1.20442075452;POU3F1..4:-1.26887396216;SMAD1..7,9:-1.62619779731;T:-1.68175354073;HMX1:-2.12966505805 | |top_motifs=FOXQ1:2.52785603827;HOX{A6,A7,B6,B7}:1.65031972021;HNF1A:1.59496065942;FOXD3:1.4696798492;HNF4A_NR2F1,2:1.41214187562;ONECUT1,2:1.0833722397;bHLH_family:0.976959073776;TBX4,5:0.933835313005;BPTF:0.92738432844;RORA:0.839323690963;ZEB1:0.775725644499;NR6A1:0.757710909689;TFAP2B:0.750281398571;LHX3,4:0.715558074501;ZNF148:0.711803293322;ELK1,4_GABP{A,B1}:0.628034884816;POU6F1:0.62526577345;FOX{D1,D2}:0.606838060431;XCPE1{core}:0.603247682997;SP1:0.584360679094;ADNP_IRX_SIX_ZHX:0.575913585893;ZBTB16:0.56292721521;IKZF2:0.556520174632;AIRE:0.548665441678;ALX1:0.547703259343;PPARG:0.489027895368;PAX8:0.480514832162;TEF:0.436694301881;NKX6-1,2:0.436152183008;LMO2:0.430990914466;MYOD1:0.429862043665;MED-1{core}:0.423202802944;TFAP2{A,C}:0.420980698974;SNAI1..3:0.407585944019;TFCP2:0.399483904678;SOX5:0.331619573317;NANOG:0.326490228383;PAX4:0.318152225426;YY1:0.309125423987;PRRX1,2:0.28340467778;EP300:0.279296299431;EGR1..3:0.26932498777;MAZ:0.259065645702;NFIX:0.258043404971;TEAD1:0.243431802465;EVI1:0.230610497384;GLI1..3:0.224344366286;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.218762822253;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.212606099082;ZFP161:0.20864749034;ESR1:0.191468669021;FOX{I1,J2}:0.155816573524;AHR_ARNT_ARNT2:0.15123399845;GTF2A1,2:0.146151505429;BREu{core}:0.145623680517;CRX:0.13275535852;ZBTB6:0.121890263191;FOXM1:0.100165924962;CDC5L:0.0931886161807;PITX1..3:0.0856031627512;ELF1,2,4:0.0813262674301;FOXA2:0.0756255704979;POU1F1:0.0745586739172;PATZ1:0.0695290046446;HIF1A:0.0673792955931;NKX3-2:0.0599183487772;BACH2:0.0541584356077;HIC1:0.0530153085203;FOS_FOS{B,L1}_JUN{B,D}:0.0522163843792;MTF1:0.0402035189965;GZF1:0.039382202215;OCT4_SOX2{dimer}:0.0369903377211;NFE2:0.0357544025524;PAX5:0.0195707434207;RFX1:0.00461028891958;HSF1,2:0.00205135339096;GATA6:-0.0113005822105;IRF1,2:-0.0144253135686;HES1:-0.0160448658489;IRF7:-0.0208569953493;CDX1,2,4:-0.0223805072421;MTE{core}:-0.0243507118831;TOPORS:-0.0276409529564;SOX2:-0.0326511568333;NKX2-1,4:-0.0445097845631;TLX2:-0.0454439282427;POU2F1..3:-0.0481830143845;FOXP1:-0.0734115205327;FOX{F1,F2,J1}:-0.0967220669048;NFE2L2:-0.0974255344731;ZNF143:-0.102923221617;PBX1:-0.105523221733;KLF4:-0.115482503415;CEBPA,B_DDIT3:-0.136157120146;MYBL2:-0.145361972697;NR1H4:-0.146120498652;SREBF1,2:-0.156917727994;CUX2:-0.166867329916;LEF1_TCF7_TCF7L1,2:-0.171153714981;RREB1:-0.189975149598;FOXP3:-0.211583239199;NRF1:-0.239647854953;HLF:-0.244552967363;FOSL2:-0.259096280085;UFEwm:-0.267805595043;NR3C1:-0.271235895016;STAT5{A,B}:-0.27265454142;TP53:-0.278895034574;FOXO1,3,4:-0.280812142617;NHLH1,2:-0.281037750091;NFKB1_REL_RELA:-0.285148835815;EN1,2:-0.2852091114;FOXN1:-0.287227990925;SPI1:-0.305228659509;TLX1..3_NFIC{dimer}:-0.308766587371;PDX1:-0.308818171937;GTF2I:-0.30931153766;RFX2..5_RFXANK_RFXAP:-0.309723351057;SPZ1:-0.321959810739;PAX2:-0.331165700026;ETS1,2:-0.351026550149;NKX2-3_NKX2-5:-0.356730764383;NANOG{mouse}:-0.359366930786;STAT2,4,6:-0.367652519652;ATF5_CREB3:-0.368776927528;MEF2{A,B,C,D}:-0.369241525941;ZNF423:-0.371366194547;EBF1:-0.378366501245;REST:-0.386267459614;RXR{A,B,G}:-0.391345830504;ATF4:-0.393349941328;ALX4:-0.395201582353;SPIB:-0.396725592239;MZF1:-0.412494048331;MYB:-0.418041379386;SOX17:-0.43579943961;SOX{8,9,10}:-0.436711885421;GCM1,2:-0.438819573265;ZIC1..3:-0.440515357183;NKX3-1:-0.467607607404;POU5F1:-0.472697098175;TFDP1:-0.476563227477;ARID5B:-0.491906468091;PRDM1:-0.505318629329;HOX{A5,B5}:-0.511207436103;DMAP1_NCOR{1,2}_SMARC:-0.511894564247;SRF:-0.51825889448;ATF2:-0.5234672093;ZNF384:-0.529640870422;NFE2L1:-0.536229836174;ESRRA:-0.544565285565;VSX1,2:-0.550592618922;IKZF1:-0.557440182201;MYFfamily:-0.564426112257;E2F1..5:-0.568539521721;PAX3,7:-0.575224499959;CREB1:-0.595256519192;PAX1,9:-0.599332408387;GFI1B:-0.626461176403;TGIF1:-0.627163335414;ATF6:-0.628370624954;TAL1_TCF{3,4,12}:-0.661848044433;TBP:-0.690202180595;AR:-0.702788389166;NFIL3:-0.710454726815;STAT1,3:-0.741888132379;NR5A1,2:-0.750902800402;JUN:-0.764280955022;GATA4:-0.780845456686;RBPJ:-0.796510863099;DBP:-0.798203525224;HOX{A4,D4}:-0.804584914103;GFI1:-0.806379413664;NFATC1..3:-0.817431969827;HMGA1,2:-0.821189134035;RUNX1..3:-0.847618624688;NFY{A,B,C}:-0.876742969513;PAX6:-0.901171126024;TFAP4:-0.923439617018;NKX2-2,8:-0.93183914745;MAFB:-0.939225202943;XBP1:-0.94158632295;RXRA_VDR{dimer}:-0.982784398018;HBP1_HMGB_SSRP1_UBTF:-1.00151951011;ZNF238:-1.02373641405;FOXL1:-1.0415926045;HOXA9_MEIS1:-1.13328294644;HAND1,2:-1.20442075452;POU3F1..4:-1.26887396216;SMAD1..7,9:-1.62619779731;T:-1.68175354073;HMX1:-2.12966505805 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10797-110I5;search_select_hide=table117:FF:10797-110I5 | |||
}} | }} | ||
Latest revision as of 15:05, 3 June 2020
| Name: | tubular adenocarcinoma cell line:SUIT-2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11883 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11883
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11883
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.135 |
| 10 | 10 | 0.376 |
| 100 | 100 | 0.547 |
| 101 | 101 | 0.113 |
| 102 | 102 | 0.777 |
| 103 | 103 | 0.834 |
| 104 | 104 | 0.558 |
| 105 | 105 | 0.308 |
| 106 | 106 | 0.247 |
| 107 | 107 | 0.189 |
| 108 | 108 | 0.475 |
| 109 | 109 | 0.782 |
| 11 | 11 | 0.0483 |
| 110 | 110 | 0.723 |
| 111 | 111 | 0.573 |
| 112 | 112 | 0.433 |
| 113 | 113 | 0.00569 |
| 114 | 114 | 0.446 |
| 115 | 115 | 0.751 |
| 116 | 116 | 0.24 |
| 117 | 117 | 0.646 |
| 118 | 118 | 0.949 |
| 119 | 119 | 0.126 |
| 12 | 12 | 0.666 |
| 120 | 120 | 0.15 |
| 121 | 121 | 0.725 |
| 122 | 122 | 0.975 |
| 123 | 123 | 0.0383 |
| 124 | 124 | 0.00951 |
| 125 | 125 | 0.169 |
| 126 | 126 | 0.439 |
| 127 | 127 | 0.996 |
| 128 | 128 | 0.336 |
| 129 | 129 | 0.776 |
| 13 | 13 | 0.918 |
| 130 | 130 | 0.967 |
| 131 | 131 | 0.0135 |
| 132 | 132 | 0.19 |
| 133 | 133 | 0.077 |
| 134 | 134 | 0.0332 |
| 135 | 135 | 0.029 |
| 136 | 136 | 0.0665 |
| 137 | 137 | 0.167 |
| 138 | 138 | 0.278 |
| 139 | 139 | 0.677 |
| 14 | 14 | 0.717 |
| 140 | 140 | 0.714 |
| 141 | 141 | 0.00352 |
| 142 | 142 | 0.967 |
| 143 | 143 | 0.0279 |
| 144 | 144 | 0.989 |
| 145 | 145 | 0.52 |
| 146 | 146 | 0.144 |
| 147 | 147 | 0.293 |
| 148 | 148 | 0.948 |
| 149 | 149 | 0.462 |
| 15 | 15 | 0.847 |
| 150 | 150 | 0.457 |
| 151 | 151 | 0.817 |
| 152 | 152 | 0.015 |
| 153 | 153 | 0.759 |
| 154 | 154 | 0.617 |
| 155 | 155 | 0.517 |
| 156 | 156 | 0.924 |
| 157 | 157 | 0.317 |
| 158 | 158 | 0.572 |
| 159 | 159 | 0.831 |
| 16 | 16 | 0.314 |
| 160 | 160 | 0.0285 |
| 161 | 161 | 0.187 |
| 162 | 162 | 0.82 |
| 163 | 163 | 0.345 |
| 164 | 164 | 0.22 |
| 165 | 165 | 0.272 |
| 166 | 166 | 0.966 |
| 167 | 167 | 0.581 |
| 168 | 168 | 0.488 |
| 169 | 169 | 0.486 |
| 17 | 17 | 0.453 |
| 18 | 18 | 0.223 |
| 19 | 19 | 0.101 |
| 2 | 2 | 0.477 |
| 20 | 20 | 0.00957 |
| 21 | 21 | 0.577 |
| 22 | 22 | 0.771 |
| 23 | 23 | 0.127 |
| 24 | 24 | 0.518 |
| 25 | 25 | 0.124 |
| 26 | 26 | 0.742 |
| 27 | 27 | 0.707 |
| 28 | 28 | 0.485 |
| 29 | 29 | 0.359 |
| 3 | 3 | 0.533 |
| 30 | 30 | 0.819 |
| 31 | 31 | 0.406 |
| 32 | 32 | 5.09888e-4 |
| 33 | 33 | 0.256 |
| 34 | 34 | 0.419 |
| 35 | 35 | 0.0426 |
| 36 | 36 | 0.286 |
| 37 | 37 | 0.702 |
| 38 | 38 | 0.447 |
| 39 | 39 | 0.83 |
| 4 | 4 | 0.936 |
| 40 | 40 | 0.818 |
| 41 | 41 | 0.00347 |
| 42 | 42 | 0.919 |
| 43 | 43 | 0.192 |
| 44 | 44 | 0.916 |
| 45 | 45 | 0.869 |
| 46 | 46 | 0.224 |
| 47 | 47 | 0.484 |
| 48 | 48 | 0.407 |
| 49 | 49 | 0.12 |
| 5 | 5 | 0.313 |
| 50 | 50 | 0.235 |
| 51 | 51 | 0.869 |
| 52 | 52 | 0.776 |
| 53 | 53 | 0.292 |
| 54 | 54 | 0.766 |
| 55 | 55 | 0.921 |
| 56 | 56 | 0.353 |
| 57 | 57 | 0.69 |
| 58 | 58 | 0.332 |
| 59 | 59 | 0.109 |
| 6 | 6 | 0.237 |
| 60 | 60 | 0.856 |
| 61 | 61 | 0.628 |
| 62 | 62 | 0.206 |
| 63 | 63 | 0.677 |
| 64 | 64 | 0.243 |
| 65 | 65 | 0.291 |
| 66 | 66 | 0.86 |
| 67 | 67 | 0.0954 |
| 68 | 68 | 0.101 |
| 69 | 69 | 0.621 |
| 7 | 7 | 0.446 |
| 70 | 70 | 0.709 |
| 71 | 71 | 0.0493 |
| 72 | 72 | 0.268 |
| 73 | 73 | 0.00881 |
| 74 | 74 | 0.745 |
| 75 | 75 | 0.998 |
| 76 | 76 | 0.103 |
| 77 | 77 | 0.202 |
| 78 | 78 | 0.384 |
| 79 | 79 | 0.00147 |
| 8 | 8 | 0.783 |
| 80 | 80 | 0.0256 |
| 81 | 81 | 0.0117 |
| 82 | 82 | 0.0569 |
| 83 | 83 | 0.76 |
| 84 | 84 | 0.536 |
| 85 | 85 | 0.679 |
| 86 | 86 | 0.422 |
| 87 | 87 | 0.882 |
| 88 | 88 | 0.122 |
| 89 | 89 | 0.176 |
| 9 | 9 | 0.156 |
| 90 | 90 | 0.265 |
| 91 | 91 | 0.0547 |
| 92 | 92 | 0.343 |
| 93 | 93 | 0.47 |
| 94 | 94 | 0.0425 |
| 95 | 95 | 0.74 |
| 96 | 96 | 0.119 |
| 97 | 97 | 0.594 |
| 98 | 98 | 0.6 |
| 99 | 99 | 0.404 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11883
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
CL:0000083 epithelial cell of pancreas
DOID:4929 tubular adenocarcinoma
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100167 adenocarcinoma cell line sample
FF:0103493 SUIT-2 cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000083 (epithelial cell of pancreas)
0000255 (eukaryotic cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
305 (carcinoma)
170 (endocrine gland cancer)
1793 (pancreatic cancer)
299 (adenocarcinoma)
4929 (tubular adenocarcinoma)
UBERON: Anatomy
0000468 (multi-cellular organism)
0001264 (pancreas)
0002100 (trunk)
0000466 (immaterial anatomical entity)
0002075 (viscus)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002323 (body cavity)
0005177 (trunk region element)
0000464 (anatomical space)
0004458 (body cavity or lining)
0000949 (endocrine system)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0100794 (pancreatic cancer cell line sample)
0100167 (adenocarcinoma cell line sample)
0103493 (SUIT-2 cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000223 (endodermal cell)
