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{{f5samples
 
{{f5samples
|id=FF:11386-118B9
+
|DRA_sample_Accession=CAGE@SAMD00004934
|name=CD14+ monocyte derived endothelial progenitor cells, donor3
+
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004934
|sample_id=11386
+
|accession_numbers=CAGE;DRX008131;DRR009003;DRZ000428;DRZ001813;DRZ011778;DRZ013163
|rna_tube_id=118B9
+
|accession_numbers_RNASeq=sRNA-Seq;DRX037143;DRR041509;DRZ007151
|rna_box=118
+
|ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
|rna_position=B9
+
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000988,CL:0000548,CL:0000763,CL:0002320,CL:0000066,CL:0002371,CL:0000213,CL:0000766,CL:0002078,CL:0000219,CL:0000215,CL:0000134,CL:0000738,CL:0002087,CL:0000255,CL:0000034,CL:0000576,CL:0000115,CL:0000566,CL:0002619
|sample_cell_lot=N/A
 
|sample_cell_catalog=N/A
 
|sample_company=3HBiomedical
 
|rna_lot_number=EPC724
 
|rna_catalog_number=3H100-81-10
 
|sample_species=Human (Homo sapiens)
 
|sample_strain=
 
|sample_dev_stage=46 years old adult
 
|sample_tissue=blood
 
|sample_donor(cell lot)=
 
|sample_sex=male
 
|sample_age=46
 
|sample_ethnicity=C
 
|rna_rin=
 
|rna_od260/230=
 
|rna_od260/280=
 
|sample_cell_type=blood vessel endothelial progenitor cell
 
|sample_cell_line=
 
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
 
|sample_experimental_condition=
 
|sample_disease=
 
|rna_sample_type=total RNA
 
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
 
|rna_weight_ug=10
 
|rna_concentration=0.33
 
|sample_note=former endothelial progenitor cells
 
|profile_hcage=CNhs11904,LSID834,release010,COMPLETED
 
|profile_cagescan=,,,
 
|profile_srnaseq=SRhi10009,,,
 
|profile_rnaseq=,,,
 
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000063,CL:0000066,CL:0000115,CL:0000134,CL:0000144,CL:0000213,CL:0000215,CL:0000219,CL:0000220,CL:0000222,CL:0000255,CL:0000548,CL:0000566,CL:0000723,CL:0002078,CL:0002320,CL:0002321,CL:0002371,CL:0002619
 
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
 
 
|ancestors_in_disease_facet=
 
|ancestors_in_disease_facet=
|sample_description=
+
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000248
 +
|comment=
 +
|created_by=
 +
|creation_date=
 +
|data_phase=2
 +
|datafreeze_phase=2
 +
|def=
 +
|expression_enrichment_score=chr11:47400078..47400106,-!p1@SPI1!2.56!360.86!SPI1;;chr2:68592406..68592424,+!p1@PLEK!2.40!252.94!PLEK;;chr16:85932760..85932775,+!p1@IRF8!2.31!204.77!IRF8;;chr7:115670804..115670825,-!p1@TFEC!2.17!147.85!TFEC;;chr20:39317868..39317884,-!p1@MAFB!2.04!1208.03!MAFB;;chr12:54778471..54778528,-!p1@ZNF385A!2.00!99.17!ZNF385A;;chr11:47400062..47400077,-!p2@SPI1!1.90!77.79!SPI1;;chr16:79634624..79634642,-!p1@MAF!1.86!265.30!MAF;;chr10:51572408..51572454,+!p3@NCOA4!1.74!301.36!NCOA4;;chr10:31288398..31288455,-!p2@ZNF438!1.72!59.76!ZNF438;;chr2:145277882..145277967,-!p3@ZEB2!1.67!77.27!ZEB2;;chr4:26165074..26165110,+!p9@RBPJ!1.67!45.59!RBPJ;;chr16:79634595..79634620,-!p2@MAF!1.62!72.64!MAF;;chr7:137620650..137620677,-!p3@CREB3L2!1.54!34.00!CREB3L2;;chr2:122042770..122042785,-!p1@TFCP2L1!1.54!33.48!TFCP2L1;;chr2:145277640..145277771,-!p1@ZEB2!1.53!418.05!ZEB2;;chr7:128577972..128578047,+!p1@IRF5!1.51!48.68!IRF5;;chr14:75988771..75988826,+!p1@BATF!1.50!40.70!BATF;;chr7:137620684..137620711,-!p4@CREB3L2!1.50!30.39!CREB3L2;;chrY:21906594..21906622,-!p1@KDM5D!1.47!28.59!KDM5D;;chr2:113999360..113999386,-!p4@PAX8!1.45!27.30!PAX8;;chr12:26277956..26277980,-!p1@BHLHE41!1.44!92.47!BHLHE41;;chr7:50344289..50344323,+!p1@IKZF1!1.42!25.24!IKZF1;;chr11:47279504..47279563,+!p1@NR1H3!1.41!55.38!NR1H3;;chr16:79633894..79633954,-!p3@MAF!1.37!43.02!MAF;;chr19:33793430..33793447,-!p1@CEBPA!1.36!91.18!CEBPA;;chr16:67198683..67198698,+!p2@HSF4!1.30!18.80!HSF4;;chr1:78050720..78050734,-!p9@ZZZ3!1.26!17.00!ZZZ3;;chr3:69788576..69788648,+!p1@MITF!1.24!85.26!MITF;;chr10:51572339..51572376,+!p4@NCOA4!1.24!36.32!NCOA4;;chr6:144385698..144385742,-!p2@PLAGL1!1.18!17.00!PLAGL1;;chr11:47400032..47400043,-!p5@SPI1!1.18!14.17!SPI1;;chr7:50343634..50343717,+!p2@IKZF1!1.17!13.91!IKZF1;;chr10:31288370..31288393,-!p3@ZNF438!1.17!13.65!ZNF438;;chr11:47399996..47400014,-!p4@SPI1!1.17!13.65!SPI1;;chr12:12764995..12765017,+!p3@CREBL2!1.13!17.77!CREBL2;;chr16:79634581..79634592,-!p4@MAF!1.13!12.62!MAF;;chr3:114343039..114343085,-!p8@ZBTB20!1.13!12.62!ZBTB20;;chr1:167298300..167298319,+!p2@POU2F1!1.13!12.36!POU2F1;;chr5:88178983..88179012,-!p1@MEF2C!1.12!94.79!MEF2C;;chr12:26277929..26277955,-!p3@BHLHE41!1.12!17.26!BHLHE41;;chr11:128563948..128564003,+!p1@FLI1!1.10!140.89!FLI1;;chr11:47400045..47400060,-!p6@SPI1!1.09!11.33!SPI1;;chr7:115670792..115670797,-!p2@TFEC!1.09!11.33!TFEC;;chr13:41593425..41593480,-!p1@ELF1!1.07!69.55!ELF1;;chr2:145275982..145276003,-!p7@ZEB2!1.06!10.56!ZEB2;;chr19:13213954..13214021,-!p4@LYL1!1.05!10.30!LYL1;;chr9:88969303..88969335,-!p1@ZCCHC6!1.04!93.50!ZCCHC6;;chr3:71179699..71179744,-!p2@FOXP1!1.04!75.98!FOXP1;;chr19:13213662..13213686,-!p1@LYL1!1.04!14.94!LYL1;;chr17:40440481..40440550,+!p1@STAT5A!1.03!70.83!STAT5A;;chr2:113999397..113999413,-!p17@PAX8!1.03!9.79!PAX8;;chr12:26277817..26277863,-!p2@BHLHE41!1.01!12.62!BHLHE41;;chr8:116681194..116681214,-!p1@TRPS1!1.00!86.55!TRPS1;;chr2:70142232..70142251,+!p1@MXD1!0.98!49.71!MXD1;;chr16:67198633..67198671,+!p1@HSF4!0.98!8.50!HSF4;;chr20:50159198..50159299,-!p1@NFATC2!0.97!12.36!NFATC2;;chr2:145275947..145275981,-!p10@ZEB2!0.93!7.47!ZEB2;;chr4:185395633..185395651,-!p2@IRF2!0.91!11.59!IRF2;;chr2:68592394..68592405,+!p2@PLEK!0.91!7.21!PLEK;;chr3:48282587..48282603,+!p1@ZNF589!0.90!32.20!ZNF589;;chr7:50344251..50344288,+!p3@IKZF1!0.90!6.95!IKZF1;;chrX:106960285..106960299,-!p1@TSC22D3!0.88!185.71!TSC22D3;;chr1:25256756..25256774,-!p1@RUNX3!0.88!12.88!RUNX3;;chr4:106068026..106068084,+!p1@TET2!0.87!61.82!TET2;;chr2:231090433..231090469,+!p1@SP140!0.87!6.44!SP140;;chr1:158979686..158979745,+!p1@IFI16!0.86!216.11!IFI16;;chr19:35759824..35759891,+!p1@USF2!0.86!204.52!USF2;;chr12:12764947..12764986,+!p2@CREBL2!0.86!12.62!CREBL2;;chr1:221053049..221053075,+!p3@HLX!0.86!11.33!HLX;;chr2:192015750..192015793,-!p2@STAT4!0.86!8.50!STAT4;;chr21:30672433..30672464,+!p6@BACH1!0.86!6.18!BACH1;;chr16:79633682..79633694,-!p12@MAF!0.86!6.18!MAF;;chr8:48650715..48650735,-!p1@CEBPD!0.85!817.29!CEBPD;;chr5:88179017..88179046,-!p2@MEF2C!0.85!25.76!MEF2C;;chr18:52989031..52989079,-!p2@TCF4!0.85!14.94!TCF4;;chr16:88752889..88752921,-!p1@SNAI3!0.85!7.21!SNAI3;;chr4:87857433..87857472,+!p9@AFF1!0.84!11.08!AFF1;;chrY:2803415..2803468,+!p1@ZFY!0.84!5.92!ZFY;;chr11:47399947..47399961,-!p3@SPI1!0.84!5.92!SPI1;;chr7:149470641..149470694,-!p1@ZNF467!0.83!27.82!ZNF467;;chrX:131623044..131623089,-!p1@MBNL3!0.83!25.76!MBNL3;;chr20:3388238..3388323,-!p1@C20orf194!0.82!42.50!C20orf194;;chr3:114866084..114866118,-!p2@ZBTB20!0.82!21.89!ZBTB20;;chr11:113930291..113930339,+!p2@ZBTB16!0.82!9.53!ZBTB16;;chr9:88969287..88969297,-!p3@ZCCHC6!0.82!7.73!ZCCHC6;;chr19:13213704..13213726,-!p3@LYL1!0.81!7.47!LYL1;;chrX:107019163..107019179,-!p7@TSC22D3!0.81!6.44!TSC22D3;;chrX:107018836..107018862,-!p8@TSC22D3!0.81!5.41!TSC22D3;;chr20:3321190..3321215,-!p7@C20orf194!0.81!5.41!C20orf194;;chr2:145277792..145277808,-!p15@ZEB2!0.81!5.41!ZEB2;;chr2:145277833..145277845,-!p16@ZEB2!0.81!5.41!ZEB2;;chr2:48541789.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 +
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002078;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002619;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405
 +
|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0000222
 
|fonse_cell_line=
 
|fonse_cell_line=
 
|fonse_cell_line_closure=
 
|fonse_cell_line_closure=
Line 66: Line 43:
 
|fonse_treatment=
 
|fonse_treatment=
 
|fonse_treatment_closure=
 
|fonse_treatment_closure=
|top_motifs=
 
|comment=
 
|created_by=
 
|creation_date=
 
|def=
 
 
|has_quality=
 
|has_quality=
|is_a=CL:0000576;;EFO:0002091;;FF:0000002;;FF:0000210;;FF:0000248
+
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocyte%2520derived%2520endothelial%2520progenitor%2520cells%252c%2520donor3.CNhs11904.11386-118B9.hg19.nobarcode.bam
 +
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocyte%2520derived%2520endothelial%2520progenitor%2520cells%252c%2520donor3.CNhs11904.11386-118B9.hg19.ctss.bed.gz
 +
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocyte%2520derived%2520endothelial%2520progenitor%2520cells%252c%2520donor3.CNhs11904.11386-118B9.hg19.nobarcode.rdna.fa.gz
 +
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocyte%2520derived%2520endothelial%2520progenitor%2520cells%252c%2520donor3.CNhs11904.11386-118B9.hg38.nobarcode.bam
 +
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocyte%2520derived%2520endothelial%2520progenitor%2520cells%252c%2520donor3.CNhs11904.11386-118B9.hg38.nobarcode.ctss.bed.gz
 +
|id=FF:11386-118B9
 +
|is_a=CL:0000576;;EFO:0002091;;FF:0000248
 +
|is_obsolete=
 +
|library_id=CNhs11904
 +
|library_id_phase_based=2:CNhs11904
 +
|microRNAs=
 +
|microRNAs_nn=
 +
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11386
 +
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10009.GTGGCC.11386
 +
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11386
 +
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10009.GTGGCC.11386
 +
|name=CD14+ monocyte derived endothelial progenitor cells, donor3
 
|namespace=FANTOM5
 
|namespace=FANTOM5
 
|part_of=
 
|part_of=
 +
|profile_cagescan=,,,
 +
|profile_hcage=CNhs11904,LSID834,release010,COMPLETED
 +
|profile_rnaseq=
 +
|profile_srnaseq=SRhi10009,,,
 +
|refex=http://refex.dbcls.jp/genelist.php?lang
 +
|repeat_enrich_byfamily=0,0,0.202882575870939,0,0,0,0,0.020137925484171,0.0995340912392844,0.0509486812559716,-0.282403560576942,0,0.0995340912392844,0,0,0,0,0,0,0,0.485807218285769,0.0995340912392844,0,0,0.0271329452221294,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0.0281882219560463,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0,0.0995340912392844,-0.0969923612426051,0,0,0.210217073091065,0,0,0,0,0,0,0,0,0.0995340912392844,0,0,0,0,0,0,0,0,0,0.0497670456196422,0,0,0,0,0,-0.552571649267773,0,0,0,-0.00442259322770289,-0.211197402695869,0,0,0,0,0.00149874000157797,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,0.0319117322146298,0.15230864637159,0,0,-0.0235363743139321,0,0,0
 +
|repeat_enrich_byname=0,0,0,0,0.00149874000157797,0,0,0,0,0.0995340912392844,0,0,0,0,0,0,0.503819865616738,0.0497670456196422,0.046813736804621,0.105126644081362,0,0,-0.302958193607153,0,0.0995340912392844,0,0,0,0,0.180455955570557,0.0995340912392844,0,-0.128119866952565,0,-0.0504125515893149,0,0,0,0,-0.0186252810838506,0.844865179703464,0,-0.0499371678470928,-0.0683442610773682,0,0,0,0,-0.046426875905522,0,0.186681216510422,-0.0827201683234173,-0.221611588102807,-0.329953049287569,-0.055712496781182,0,0,0,-0.413085794917416,-0.837922957822331,0,0,-0.121779851751874,0.254419021125518,0,0,-0.391044581551635,0,0.422722911041933,-0.07459977332599,0,-0.157703723368185,0,0,0,0,0,0,0,0,0,0,0,0.309731035623865,0.0324442347948757,0,0,0,0,0.263765934164212,0,0,0.210290192965229,-0.181525142632934,0.0677492600884305,-0.476567593789196,0,0.815082149091236,0.00451239260337963,-0.368832341939405,-0.0890914788974192,-0.147401849371139,-0.189981719549847,0,-0.0561540993263138,-0.232904792379819,0,-0.0931406778054782,-0.101758895301553,0.71210067986045,-0.171431171149265,0,0,0,-0.181567438315633,0,-0.0492698408835675,-0.130681883002929,0.0108068516786634,0.285598107755207,0.240805979567028,-0.46100023952195,-0.0797423624595073,-0.0395325284566706,0.293562288005708,0,-0.4215723249037,0,0,0.00942991927729135,0.0228686630752225,-0.122582709768445,0.298628896558366,-0.0275450454171424,0.267021279091322,0.112111694493189,0,-0.435380976323407,-0.030012827799071,0,0,0.108183611581329,0,0,0,0,0,-0.447757980957354,0.41401833017878,0.172909590186334,0,-0.0380574034838035,0,-0.0734722869237845,0,0.0566704144692879,0.105389938693357,0.222825803195337,0.29094254432556,0,0.0789743159305314,0.303995366715334,0.282636890518601,-0.422394805391737,0.711958573051154,0.125762196691688,0.457501588391496,0.228209773877903,0.353411376153446,-0.275752932992257,-0.0881268324752877,0,-0.0596362817930484,0.144410337103807,0.202999529304975,-0.583529904229572,0,0.299704686148071,0,0.120295588804997,0.0139152583386656,-0.432338543809267,-0.181000919999395,0.0465178437050832,0.343957176135229,0,-0.00421768757005747,-0.788130937773974,0,-0.0237425865671464,0,0.180455955570557,-0.150367083334639,-0.697695966512583,1.06690393268214,-0.138989456679195,0,-0.790080158389657,0,0,-0.134086517543286,0.0131657488404452,0,0.329621028041187,0.231169076308602,-0.0206396922734983,-0.0164369821956497,0,0,-0.645700337992725,0,0,-0.506393972578746,0,-0.619783323958633,-0.00468455488192174,0,-0.108622809454255,0,0,-0.177527765965176,0.0995340912392844,0.104557560633279,0,0,-0.200114250979182,0,0,0,0,0.0076168853131749,0,0,0,0,0,0,0,0.200045248566262,-0.255299238977164,0,0.0947988030578781,0,0.0995340912392844,0,0,0,0.0450954358798481,0,0,-1.07143088326305,-0.0683527399529223,-0.12301741567642,0,0,0,0,0.231904184304129,0.156196269379121,0,-0.0323286152583473,0,0,0,0,0.013393101450073,0,0,0.0497670456196422,0.0497670456196422,0.0418036341856204,-0.061362512474642,0,0,0,-0.27695440160179,0.0995340912392844,0,0,0,0.369849472388137,0,0,0.303290473785885,0,-0.0378410064078205,0.017952211692443,0,0.0079945825268995,-0.636916282433645,-0.453386210181043,0,0,0.224460086495882,0,0,0.159451792782404,0,0,0,0,0,0,0,0,0,-0.214314512399756,0,0,0,0,0,0.0995340912392844,0,0,0,0,0,0.305007156488347,-0.0922240566585104,0,0,0,0,0,0,0,0.0256610225407391,0.0780000475944895,0,0,0,0,0,0.0995340912392844,0,0,-0.16386523935908,0,0,0,0,0,-0.0969923612426051,0,0,0,0.405765151741878,-0.564807121153884,0,0,0.128403019548364,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0237849947961633,0.0509486812559716,0,0.0995340912392844,0,0,0,0.0995340912392844,0,-0.27483329820609,0,0,0,0,-0.113884373708977,0,0,0,-0.104796384789156,0,0.020137925484171,0,0,0,0,0,0.0844965481969702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0722111176484921,0.0995453145221945,0.000666381418519602,-0.018062499219853,0,0,-0.182861307013399,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.05536993398019,0,0,0,0,0,0,0,-0.0979578962680575,0,0,-0.0920328098005262,0,0,0,0,0,0,-0.0275268628783947,-0.233453354203505,0.0154418773961325,0,0,0,-0.054385572482455,0,0,-0.0465752321064437,0.0995340912392844,0.0327567038203831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0271329452221294,0,0,0,0,0,0,0,0,0,0,0,0.00027685550801862,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0995340912392844,0,0,0.124320893302417,0,0,0,0,0,0,-0.0340113632754165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0800184682686384,0,0,0,0.398733356987651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0995340912392844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.04599603547655,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0482220752390542,0,0.09607932334053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.450969951276428,0,0,0,0,0.0518969805783656,0,0,0,0,0,0,0,0.358140026811126,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.253610608288505,0,0,0.049196023722347,0,0,0,0,0,0,0,0,0,0,0,0,0.038213912089158,0,0,0,0,0,0,0.0995340912392844,0,0,0,-0.0484300422256687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0995340912392844,0,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 +
|rna_box=118
 +
|rna_catalog_number=3H100-81-10
 +
|rna_concentration=0.33
 +
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
 +
|rna_lot_number=EPC724
 +
|rna_od260/230=
 +
|rna_od260/280=
 +
|rna_position=B9
 +
|rna_rin=
 +
|rna_sample_type=total RNA
 +
|rna_tube_id=118B9
 +
|rna_weight_ug=10
 +
|rnaseq_library_id=SRhi10009.GTGGCC
 +
|sample_age=46
 +
|sample_category=primary cells
 +
|sample_cell_catalog=N/A
 +
|sample_cell_line=
 +
|sample_cell_lot=N/A
 +
|sample_cell_type=blood vessel endothelial progenitor cell
 +
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
 +
|sample_company=3HBiomedical
 +
|sample_description=
 +
|sample_dev_stage=46 years old adult
 +
|sample_disease=
 +
|sample_donor(cell lot)=
 +
|sample_ethnicity=C
 +
|sample_experimental_condition=
 +
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.25800931315922e-235!GO:0043227;membrane-bound organelle;3.55997611395441e-153!GO:0043231;intracellular membrane-bound organelle;9.2168381952241e-153!GO:0005737;cytoplasm;5.95545961767877e-145!GO:0043226;organelle;2.60387486673588e-136!GO:0043229;intracellular organelle;1.3914933597184e-135!GO:0044444;cytoplasmic part;2.65865488823947e-110!GO:0044422;organelle part;5.54150364640941e-93!GO:0044446;intracellular organelle part;2.47172624154037e-91!GO:0044237;cellular metabolic process;2.17766477479008e-77!GO:0044238;primary metabolic process;4.43093719935905e-76!GO:0043170;macromolecule metabolic process;7.39278552254233e-71!GO:0032991;macromolecular complex;2.47749510862471e-66!GO:0003723;RNA binding;1.19609810173529e-54!GO:0044428;nuclear part;1.5692863155775e-52!GO:0030529;ribonucleoprotein complex;1.86806053194449e-52!GO:0005634;nucleus;2.65851030850002e-52!GO:0033036;macromolecule localization;6.35970987519808e-51!GO:0043233;organelle lumen;1.70918470502007e-50!GO:0031974;membrane-enclosed lumen;1.70918470502007e-50!GO:0005515;protein binding;1.22733299342658e-49!GO:0015031;protein transport;1.55557461680948e-48!GO:0045184;establishment of protein localization;1.10284436370846e-47!GO:0031090;organelle membrane;1.96081839609404e-47!GO:0008104;protein localization;2.97500037564038e-47!GO:0019538;protein metabolic process;7.2157434392438e-47!GO:0005739;mitochondrion;1.69201025032373e-45!GO:0044260;cellular macromolecule metabolic process;3.14841297484558e-42!GO:0044267;cellular protein metabolic process;1.14837989011298e-41!GO:0006412;translation;3.56350874671997e-37!GO:0043283;biopolymer metabolic process;1.71600877231781e-36!GO:0043234;protein complex;5.71416855427755e-35!GO:0006396;RNA processing;9.95615267376345e-35!GO:0044429;mitochondrial part;6.00192196943944e-33!GO:0016071;mRNA metabolic process;6.52417210120079e-33!GO:0031967;organelle envelope;7.94460965177209e-33!GO:0031975;envelope;1.69229171078399e-32!GO:0031981;nuclear lumen;2.10432468989536e-32!GO:0009058;biosynthetic process;4.4257392244898e-32!GO:0046907;intracellular transport;4.46281726150296e-32!GO:0005829;cytosol;9.80216448203829e-32!GO:0010467;gene expression;3.39386663439439e-31!GO:0009059;macromolecule biosynthetic process;5.42060830151607e-31!GO:0006886;intracellular protein transport;5.99823718938699e-30!GO:0008380;RNA splicing;2.84435991351147e-28!GO:0005840;ribosome;3.73058689612048e-28!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.67933289641885e-28!GO:0006397;mRNA processing;1.56605369746541e-27!GO:0016043;cellular component organization and biogenesis;4.2272276596873e-27!GO:0044249;cellular biosynthetic process;4.46421814399635e-27!GO:0051649;establishment of cellular localization;4.24087450243443e-25!GO:0051641;cellular localization;9.42666799682182e-25!GO:0065003;macromolecular complex assembly;2.07220569613355e-24!GO:0003735;structural constituent of ribosome;8.14568298752188e-24!GO:0005740;mitochondrial envelope;1.99909317403887e-23!GO:0005654;nucleoplasm;4.64062606467968e-23!GO:0031966;mitochondrial membrane;2.93663571074612e-22!GO:0033279;ribosomal subunit;3.15820606678788e-22!GO:0005773;vacuole;1.61324779981694e-21!GO:0006119;oxidative phosphorylation;5.11787702289149e-21!GO:0019866;organelle inner membrane;5.30359625898162e-21!GO:0005681;spliceosome;1.55989456905591e-20!GO:0022607;cellular component assembly;3.32478395667713e-20!GO:0000323;lytic vacuole;4.27604728222796e-20!GO:0005764;lysosome;4.27604728222796e-20!GO:0044265;cellular macromolecule catabolic process;1.88010612882184e-19!GO:0005743;mitochondrial inner membrane;2.76482041469559e-19!GO:0016192;vesicle-mediated transport;1.18426242101196e-18!GO:0012501;programmed cell death;1.69838754677037e-18!GO:0006915;apoptosis;1.74699412450735e-18!GO:0044451;nucleoplasm part;1.93793602444418e-18!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.15352033422182e-18!GO:0048770;pigment granule;2.15352033422182e-18!GO:0042470;melanosome;2.15352033422182e-18!GO:0044248;cellular catabolic process;6.0109180672603e-18!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.45760156184745e-18!GO:0006512;ubiquitin cycle;6.66621833247364e-18!GO:0012505;endomembrane system;9.47560906825055e-18!GO:0000166;nucleotide binding;1.13073811546503e-17!GO:0008219;cell death;1.4474088099251e-17!GO:0016265;death;1.4474088099251e-17!GO:0003676;nucleic acid binding;2.29776117700025e-16!GO:0008134;transcription factor binding;2.46296986879762e-16!GO:0043285;biopolymer catabolic process;2.78238073108102e-16!GO:0044445;cytosolic part;4.16453933095687e-16!GO:0009057;macromolecule catabolic process;7.22543253552941e-16!GO:0051186;cofactor metabolic process;7.67055636063422e-16!GO:0022618;protein-RNA complex assembly;9.61084393543027e-16!GO:0005794;Golgi apparatus;2.18094030001787e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;2.99622419275188e-15!GO:0016874;ligase activity;3.02889770240794e-15!GO:0043412;biopolymer modification;3.60539169674455e-15!GO:0044257;cellular protein catabolic process;3.60539169674455e-15!GO:0006605;protein targeting;4.17867923353126e-15!GO:0006259;DNA metabolic process;4.9109538320398e-15!GO:0006511;ubiquitin-dependent protein catabolic process;5.17988397504995e-15!GO:0019941;modification-dependent protein catabolic process;5.47089002479981e-15!GO:0043632;modification-dependent macromolecule catabolic process;5.47089002479981e-15!GO:0006996;organelle organization and biogenesis;5.47089002479981e-15!GO:0044455;mitochondrial membrane part;8.32175089360412e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.01641117677037e-14!GO:0016817;hydrolase activity, acting on acid anhydrides;1.18121090461106e-14!GO:0016462;pyrophosphatase activity;1.24869110525532e-14!GO:0006457;protein folding;4.17034574263913e-14!GO:0016070;RNA metabolic process;4.51135707022388e-14!GO:0017111;nucleoside-triphosphatase activity;5.3646988018262e-14!GO:0016604;nuclear body;1.03790896325413e-13!GO:0006464;protein modification process;1.4163934212533e-13!GO:0006732;coenzyme metabolic process;2.38836570344425e-13!GO:0005768;endosome;2.4491456310158e-13!GO:0005746;mitochondrial respiratory chain;2.46303694950294e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;5.90254635704359e-13!GO:0032553;ribonucleotide binding;7.94635007747042e-13!GO:0032555;purine ribonucleotide binding;7.94635007747042e-13!GO:0005783;endoplasmic reticulum;1.02615536998795e-12!GO:0017076;purine nucleotide binding;1.0927507907244e-12!GO:0006913;nucleocytoplasmic transport;1.1831915663788e-12!GO:0000502;proteasome complex (sensu Eukaryota);1.85324231730785e-12!GO:0030163;protein catabolic process;2.2545796646291e-12!GO:0051169;nuclear transport;2.31968215865799e-12!GO:0015935;small ribosomal subunit;2.8227994500443e-12!GO:0031980;mitochondrial lumen;3.86396284253442e-12!GO:0005759;mitochondrial matrix;3.86396284253442e-12!GO:0050136;NADH dehydrogenase (quinone) activity;3.90205429165583e-12!GO:0003954;NADH dehydrogenase activity;3.90205429165583e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.90205429165583e-12!GO:0043687;post-translational protein modification;4.39731233404805e-12!GO:0048193;Golgi vesicle transport;5.38222307701177e-12!GO:0016607;nuclear speck;1.8583643455621e-11!GO:0008135;translation factor activity, nucleic acid binding;1.88844687778617e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.26582998748813e-11!GO:0042981;regulation of apoptosis;4.34904325411935e-11!GO:0044432;endoplasmic reticulum part;4.7482959221119e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.87398968148531e-11!GO:0042775;organelle ATP synthesis coupled electron transport;5.61879043855849e-11!GO:0042773;ATP synthesis coupled electron transport;5.61879043855849e-11!GO:0015934;large ribosomal subunit;6.99829314242564e-11!GO:0043067;regulation of programmed cell death;7.30518402443113e-11!GO:0009056;catabolic process;9.61612790344753e-11!GO:0005524;ATP binding;1.2508580116717e-10!GO:0030964;NADH dehydrogenase complex (quinone);1.31509686805334e-10!GO:0045271;respiratory chain complex I;1.31509686805334e-10!GO:0005747;mitochondrial respiratory chain complex I;1.31509686805334e-10!GO:0032559;adenyl ribonucleotide binding;1.59429088703887e-10!GO:0006413;translational initiation;1.61073051694409e-10!GO:0042623;ATPase activity, coupled;1.80758713948485e-10!GO:0008639;small protein conjugating enzyme activity;1.96214183863707e-10!GO:0005774;vacuolar membrane;2.00155093338812e-10!GO:0016887;ATPase activity;2.40256616075711e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.71038194662837e-10!GO:0030554;adenyl nucleotide binding;2.94362873787353e-10!GO:0003743;translation initiation factor activity;3.23319390108996e-10!GO:0004842;ubiquitin-protein ligase activity;3.68801169415237e-10!GO:0019829;cation-transporting ATPase activity;3.7597780272988e-10!GO:0006446;regulation of translational initiation;5.48526499060757e-10!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.51506215173445e-10!GO:0005770;late endosome;5.7469027890244e-10!GO:0016787;hydrolase activity;5.7469027890244e-10!GO:0005730;nucleolus;5.86717601914303e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.33976683454338e-10!GO:0005635;nuclear envelope;7.00459049057245e-10!GO:0006461;protein complex assembly;9.44389409482489e-10!GO:0019787;small conjugating protein ligase activity;9.91676721927227e-10!GO:0008565;protein transporter activity;1.13508942338432e-09!GO:0051246;regulation of protein metabolic process;1.39218859856665e-09!GO:0044437;vacuolar part;1.4763156795589e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.66532263854181e-09!GO:0051188;cofactor biosynthetic process;1.93450739493952e-09!GO:0007243;protein kinase cascade;1.94056654749605e-09!GO:0003712;transcription cofactor activity;1.96133639760966e-09!GO:0015986;ATP synthesis coupled proton transport;2.10161123038974e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.10161123038974e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;2.2797461731795e-09!GO:0000375;RNA splicing, via transesterification reactions;2.2797461731795e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.2797461731795e-09!GO:0051082;unfolded protein binding;2.40352132513044e-09!GO:0044440;endosomal part;2.40353815565996e-09!GO:0010008;endosome membrane;2.40353815565996e-09!GO:0050794;regulation of cellular process;2.72047361447098e-09!GO:0005765;lysosomal membrane;3.07015371520381e-09!GO:0006974;response to DNA damage stimulus;4.0689848735082e-09!GO:0006163;purine nucleotide metabolic process;5.50589911483153e-09!GO:0009259;ribonucleotide metabolic process;5.9042029731769e-09!GO:0009150;purine ribonucleotide metabolic process;5.95498254642716e-09!GO:0015078;hydrogen ion transmembrane transporter activity;6.40342175182642e-09!GO:0009055;electron carrier activity;6.7285256729287e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;7.31644746668392e-09!GO:0017038;protein import;9.76051635776965e-09!GO:0005789;endoplasmic reticulum membrane;1.09346627922069e-08!GO:0006164;purine nucleotide biosynthetic process;1.35985517321893e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.37906618928012e-08!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.20351713569937e-08!GO:0009108;coenzyme biosynthetic process;2.82757660342731e-08!GO:0006754;ATP biosynthetic process;2.83841182893459e-08!GO:0006753;nucleoside phosphate metabolic process;2.83841182893459e-08!GO:0009260;ribonucleotide biosynthetic process;3.29436891136469e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.64002303153262e-08!GO:0006793;phosphorus metabolic process;3.81382420209333e-08!GO:0006796;phosphate metabolic process;3.81382420209333e-08!GO:0016881;acid-amino acid ligase activity;3.95693596044533e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.02882238191556e-08!GO:0031982;vesicle;5.44403100290553e-08!GO:0046034;ATP metabolic process;5.4702046469848e-08!GO:0005761;mitochondrial ribosome;6.03586967984989e-08!GO:0000313;organellar ribosome;6.03586967984989e-08!GO:0016310;phosphorylation;6.61453451980087e-08!GO:0016469;proton-transporting two-sector ATPase complex;7.78469822706995e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;7.83941014085899e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;7.83941014085899e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.36106810016217e-08!GO:0009144;purine nucleoside triphosphate metabolic process;8.36106810016217e-08!GO:0006950;response to stress;8.70833971925129e-08!GO:0031965;nuclear membrane;8.83457937486886e-08!GO:0043069;negative regulation of programmed cell death;9.24758524611715e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;9.64033464657653e-08!GO:0043066;negative regulation of apoptosis;1.05796945430338e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.1759826778677e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.1759826778677e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.1759826778677e-07!GO:0009060;aerobic respiration;1.2028960177818e-07!GO:0005793;ER-Golgi intermediate compartment;1.37917539606861e-07!GO:0050657;nucleic acid transport;1.37917539606861e-07!GO:0051236;establishment of RNA localization;1.37917539606861e-07!GO:0050658;RNA transport;1.37917539606861e-07!GO:0044453;nuclear membrane part;1.57328049033998e-07!GO:0006916;anti-apoptosis;1.75105280931994e-07!GO:0043228;non-membrane-bound organelle;1.89146413684078e-07!GO:0043232;intracellular non-membrane-bound organelle;1.89146413684078e-07!GO:0007242;intracellular signaling cascade;2.05781087356872e-07!GO:0006403;RNA localization;2.13945329785632e-07!GO:0004386;helicase activity;2.39250711131233e-07!GO:0016568;chromatin modification;2.45647311260238e-07!GO:0051170;nuclear import;2.63478440451956e-07!GO:0009141;nucleoside triphosphate metabolic process;2.73681039498789e-07!GO:0006888;ER to Golgi vesicle-mediated transport;2.80760504896092e-07!GO:0006281;DNA repair;3.27376417167856e-07!GO:0031410;cytoplasmic vesicle;3.46910429514267e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.52552722210351e-07!GO:0006606;protein import into nucleus;4.69760064623435e-07!GO:0032446;protein modification by small protein conjugation;4.884393735358e-07!GO:0019899;enzyme binding;5.25332406203301e-07!GO:0008026;ATP-dependent helicase activity;7.06403394324463e-07!GO:0000151;ubiquitin ligase complex;7.24719879603134e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;8.12853925507861e-07!GO:0016567;protein ubiquitination;8.90335339309665e-07!GO:0006417;regulation of translation;8.91040030908146e-07!GO:0008047;enzyme activator activity;1.00560240931815e-06!GO:0007049;cell cycle;1.10529012543728e-06!GO:0050789;regulation of biological process;1.10529012543728e-06!GO:0031988;membrane-bound vesicle;1.14674596878068e-06!GO:0048475;coated membrane;1.15141232164558e-06!GO:0030117;membrane coat;1.15141232164558e-06!GO:0065009;regulation of a molecular function;1.4029918214367e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.44423332277821e-06!GO:0045333;cellular respiration;1.54264365291111e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;1.55466337952077e-06!GO:0005643;nuclear pore;1.59263173110483e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.6603630301389e-06!GO:0031252;leading edge;1.75710991981319e-06!GO:0031902;late endosome membrane;1.90770952283222e-06!GO:0048523;negative regulation of cellular process;2.1571083171668e-06!GO:0008654;phospholipid biosynthetic process;2.20366642438628e-06!GO:0009719;response to endogenous stimulus;2.68442908972687e-06!GO:0065002;intracellular protein transport across a membrane;2.68648705865005e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.69733740519288e-06!GO:0030120;vesicle coat;2.7909502168558e-06!GO:0030662;coated vesicle membrane;2.7909502168558e-06!GO:0043566;structure-specific DNA binding;2.9029699712898e-06!GO:0016740;transferase activity;2.92070620368588e-06!GO:0051028;mRNA transport;3.06409587321574e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.18418391308088e-06!GO:0007040;lysosome organization and biogenesis;3.31773724620816e-06!GO:0006099;tricarboxylic acid cycle;3.66112716527662e-06!GO:0046356;acetyl-CoA catabolic process;3.66112716527662e-06!GO:0007264;small GTPase mediated signal transduction;3.86815911174089e-06!GO:0003713;transcription coactivator activity;4.11697973026433e-06!GO:0006323;DNA packaging;4.13914219781288e-06!GO:0044431;Golgi apparatus part;4.67890111811292e-06!GO:0006752;group transfer coenzyme metabolic process;4.81794903712462e-06!GO:0016023;cytoplasmic membrane-bound vesicle;5.05418645824918e-06!GO:0009117;nucleotide metabolic process;5.32899809801802e-06!GO:0005096;GTPase activator activity;6.26402859771299e-06!GO:0006366;transcription from RNA polymerase II promoter;6.29093007005012e-06!GO:0051276;chromosome organization and biogenesis;6.39413385916374e-06!GO:0046930;pore complex;6.97822955493988e-06!GO:0003697;single-stranded DNA binding;7.40377489192554e-06!GO:0004298;threonine endopeptidase activity;8.71204257866649e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;9.2568482917491e-06!GO:0015399;primary active transmembrane transporter activity;9.2568482917491e-06!GO:0045259;proton-transporting ATP synthase complex;1.0510829940434e-05!GO:0051187;cofactor catabolic process;1.08242341304204e-05!GO:0006084;acetyl-CoA metabolic process;1.19093922754779e-05!GO:0007033;vacuole organization and biogenesis;1.4049098751954e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.61320758465287e-05!GO:0009615;response to virus;1.68420744744479e-05!GO:0016044;membrane organization and biogenesis;1.74189774049528e-05!GO:0016491;oxidoreductase activity;1.75689323133722e-05!GO:0006818;hydrogen transport;1.81437097847598e-05!GO:0031326;regulation of cellular biosynthetic process;1.82506952868228e-05!GO:0019222;regulation of metabolic process;2.18242894851486e-05!GO:0007265;Ras protein signal transduction;2.18388863929532e-05!GO:0006613;cotranslational protein targeting to membrane;2.23162022038851e-05!GO:0048519;negative regulation of biological process;2.24884776304991e-05!GO:0016564;transcription repressor activity;2.34816844855716e-05!GO:0005798;Golgi-associated vesicle;2.60169928088845e-05!GO:0016197;endosome transport;2.96997595205116e-05!GO:0007034;vacuolar transport;3.24348639737458e-05!GO:0005769;early endosome;3.27456429669195e-05!GO:0051726;regulation of cell cycle;3.28031620660225e-05!GO:0015992;proton transport;3.32524093461014e-05!GO:0009109;coenzyme catabolic process;3.77001204414494e-05!GO:0000074;regulation of progression through cell cycle;4.03606048936681e-05!GO:0030695;GTPase regulator activity;4.29452349390164e-05!GO:0009889;regulation of biosynthetic process;4.36241077203984e-05!GO:0043087;regulation of GTPase activity;4.42970536185977e-05!GO:0006643;membrane lipid metabolic process;4.51853229618772e-05!GO:0043492;ATPase activity, coupled to movement of substances;4.78189761639517e-05!GO:0044262;cellular carbohydrate metabolic process;5.03701227570675e-05!GO:0006672;ceramide metabolic process;5.38668830844104e-05!GO:0032940;secretion by cell;5.49732432047124e-05!GO:0022890;inorganic cation transmembrane transporter activity;5.835589972153e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;6.46595581957016e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.56205902449679e-05!GO:0006401;RNA catabolic process;7.08821141237859e-05!GO:0000245;spliceosome assembly;7.49187398654424e-05!GO:0030532;small nuclear ribonucleoprotein complex;7.7009447968697e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;8.09978012845203e-05!GO:0043065;positive regulation of apoptosis;8.22570277312303e-05!GO:0065007;biological regulation;8.87718857979681e-05!GO:0051168;nuclear export;9.54126365207516e-05!GO:0046519;sphingoid metabolic process;9.64735399639283e-05!GO:0051336;regulation of hydrolase activity;9.89812449614865e-05!GO:0005083;small GTPase regulator activity;0.000100260801022101!GO:0006091;generation of precursor metabolites and energy;0.000100447177959296!GO:0043068;positive regulation of programmed cell death;0.000107714935334861!GO:0045786;negative regulation of progression through cell cycle;0.00010926744156936!GO:0042254;ribosome biogenesis and assembly;0.000111538297439592!GO:0006612;protein targeting to membrane;0.000129499995282543!GO:0016563;transcription activator activity;0.000135749604498554!GO:0001726;ruffle;0.000148656081813164!GO:0043623;cellular protein complex assembly;0.000149735710653845!GO:0006650;glycerophospholipid metabolic process;0.000157629697822333!GO:0005525;GTP binding;0.000165939163984882!GO:0000139;Golgi membrane;0.000173584472330529!GO:0009967;positive regulation of signal transduction;0.000175860059966719!GO:0006399;tRNA metabolic process;0.000179343599323686!GO:0003724;RNA helicase activity;0.000180860896361169!GO:0048522;positive regulation of cellular process;0.000187227515949452!GO:0005885;Arp2/3 protein complex;0.000190328077422347!GO:0008234;cysteine-type peptidase activity;0.000193076504824512!GO:0006917;induction of apoptosis;0.000224298161680182!GO:0022402;cell cycle process;0.000257400792377077!GO:0050790;regulation of catalytic activity;0.000259784559578138!GO:0045045;secretory pathway;0.000260202623997512!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000261430502789834!GO:0004812;aminoacyl-tRNA ligase activity;0.000261430502789834!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000261430502789834!GO:0007005;mitochondrion organization and biogenesis;0.000272437117077596!GO:0006402;mRNA catabolic process;0.000309235790648702!GO:0046467;membrane lipid biosynthetic process;0.000314423871629887!GO:0012502;induction of programmed cell death;0.000324545328875096!GO:0046474;glycerophospholipid biosynthetic process;0.00033579189687785!GO:0007041;lysosomal transport;0.000387299574070395!GO:0043038;amino acid activation;0.000387299574070395!GO:0006418;tRNA aminoacylation for protein translation;0.000387299574070395!GO:0043039;tRNA aminoacylation;0.000387299574070395!GO:0005813;centrosome;0.000394428932092214!GO:0032318;regulation of Ras GTPase activity;0.000429364808804663!GO:0031324;negative regulation of cellular metabolic process;0.00044691514804713!GO:0016779;nucleotidyltransferase activity;0.00047365852568932!GO:0003714;transcription corepressor activity;0.000489633229308734!GO:0009165;nucleotide biosynthetic process;0.000527378233538813!GO:0003729;mRNA binding;0.000536523730619004!GO:0031323;regulation of cellular metabolic process;0.000604561981815092!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000618448479395716!GO:0005694;chromosome;0.000651712998844287!GO:0048518;positive regulation of biological process;0.00067520675473455!GO:0030149;sphingolipid catabolic process;0.000703220471450496!GO:0030027;lamellipodium;0.000770395727661607!GO:0030384;phosphoinositide metabolic process;0.000803517139346126!GO:0002376;immune system process;0.00085187202005113!GO:0005099;Ras GTPase activator activity;0.000875200236918089!GO:0006897;endocytosis;0.000932860556738472!GO:0010324;membrane invagination;0.000932860556738472!GO:0051427;hormone receptor binding;0.00100403341494806!GO:0005741;mitochondrial outer membrane;0.00104253909384294!GO:0019867;outer membrane;0.00109651819713851!GO:0003690;double-stranded DNA binding;0.00111911316529477!GO:0008632;apoptotic program;0.00115956896193407!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00117493584592562!GO:0015980;energy derivation by oxidation of organic compounds;0.00117767926498088!GO:0006644;phospholipid metabolic process;0.00119997298365899!GO:0005975;carbohydrate metabolic process;0.00126900257873963!GO:0003924;GTPase activity;0.00132632474786683!GO:0005815;microtubule organizing center;0.00134993339263235!GO:0019377;glycolipid catabolic process;0.00136458164317624!GO:0032561;guanyl ribonucleotide binding;0.00144010640176324!GO:0019001;guanyl nucleotide binding;0.00144010640176324!GO:0016072;rRNA metabolic process;0.00145038595347394!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00147044136078944!GO:0006364;rRNA processing;0.00155075811643992!GO:0006607;NLS-bearing substrate import into nucleus;0.0015903340075931!GO:0016853;isomerase activity;0.00164787042268229!GO:0031968;organelle outer membrane;0.00164787042268229!GO:0035257;nuclear hormone receptor binding;0.00165316321766402!GO:0044255;cellular lipid metabolic process;0.00170143708712379!GO:0006310;DNA recombination;0.00172954417528151!GO:0030133;transport vesicle;0.00180699277514216!GO:0030867;rough endoplasmic reticulum membrane;0.00183521015282747!GO:0006260;DNA replication;0.0019014001143305!GO:0004197;cysteine-type endopeptidase activity;0.00203980204358657!GO:0043021;ribonucleoprotein binding;0.00207063769604734!GO:0045454;cell redox homeostasis;0.00210462310511761!GO:0046489;phosphoinositide biosynthetic process;0.00211619825430095!GO:0005788;endoplasmic reticulum lumen;0.00211704752838098!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00219491791836292!GO:0009892;negative regulation of metabolic process;0.00220921827133605!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00222247811577688!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00224558664484249!GO:0005667;transcription factor complex;0.0022878275131608!GO:0044427;chromosomal part;0.00241312612704359!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00244420577837968!GO:0033116;ER-Golgi intermediate compartment membrane;0.00257249843765591!GO:0008186;RNA-dependent ATPase activity;0.00283317232274382!GO:0004674;protein serine/threonine kinase activity;0.00297792305476909!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00303879055937474!GO:0030118;clathrin coat;0.00329924666691752!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00333056871678903!GO:0016481;negative regulation of transcription;0.00339598224011196!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00354805115889485!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00354805115889485!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00354805115889485!GO:0031072;heat shock protein binding;0.00356799430511656!GO:0000118;histone deacetylase complex;0.00358848010681809!GO:0009966;regulation of signal transduction;0.00358953004392699!GO:0006767;water-soluble vitamin metabolic process;0.00384823700601035!GO:0046822;regulation of nucleocytoplasmic transport;0.00385293552111367!GO:0003725;double-stranded RNA binding;0.00389555681835967!GO:0022415;viral reproductive process;0.00389555681835967!GO:0000287;magnesium ion binding;0.00396145140516796!GO:0005791;rough endoplasmic reticulum;0.00396149482777715!GO:0031901;early endosome membrane;0.0041810088002608!GO:0006333;chromatin assembly or disassembly;0.00424958792451007!GO:0030658;transport vesicle membrane;0.00439834809458865!GO:0010468;regulation of gene expression;0.00440106425857637!GO:0046479;glycosphingolipid catabolic process;0.00480914556608552!GO:0016363;nuclear matrix;0.0048339003088067!GO:0051252;regulation of RNA metabolic process;0.00508713047044219!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00518152523888625!GO:0006891;intra-Golgi vesicle-mediated transport;0.00519898961145338!GO:0008610;lipid biosynthetic process;0.00523297940160481!GO:0030176;integral to endoplasmic reticulum membrane;0.00524861560328553!GO:0005762;mitochondrial large ribosomal subunit;0.005432009985002!GO:0000315;organellar large ribosomal subunit;0.005432009985002!GO:0030134;ER to Golgi transport vesicle;0.0058190050280704!GO:0004177;aminopeptidase activity;0.00582806184527578!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00615640061065456!GO:0048500;signal recognition particle;0.00634861137840976!GO:0051235;maintenance of localization;0.00672615237949454!GO:0004185;serine carboxypeptidase activity;0.00672615237949454!GO:0043488;regulation of mRNA stability;0.00691565023051366!GO:0043487;regulation of RNA stability;0.00691565023051366!GO:0004004;ATP-dependent RNA helicase activity;0.00746964147359339!GO:0015036;disulfide oxidoreductase activity;0.00749927675651624!GO:0030127;COPII vesicle coat;0.00763809577689612!GO:0012507;ER to Golgi transport vesicle membrane;0.00763809577689612!GO:0006516;glycoprotein catabolic process;0.00766564991761814!GO:0030041;actin filament polymerization;0.00766564991761814!GO:0046466;membrane lipid catabolic process;0.00800375832659487!GO:0015631;tubulin binding;0.00808585965712158!GO:0065004;protein-DNA complex assembly;0.00827048831126924!GO:0016251;general RNA polymerase II transcription factor activity;0.0085663936950709!GO:0030518;steroid hormone receptor signaling pathway;0.00889417271998997!GO:0005048;signal sequence binding;0.00910451369112961!GO:0001887;selenium metabolic process;0.00932681485774258!GO:0015923;mannosidase activity;0.00936833547767162!GO:0006665;sphingolipid metabolic process;0.00953397687561989!GO:0000785;chromatin;0.00988421268814473!GO:0030036;actin cytoskeleton organization and biogenesis;0.0105161137216873!GO:0048002;antigen processing and presentation of peptide antigen;0.0105926372066134!GO:0042613;MHC class II protein complex;0.0107153033934921!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0107408621856046!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0107761422099542!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0107761422099542!GO:0006611;protein export from nucleus;0.0109192561224062!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0109343369688695!GO:0030660;Golgi-associated vesicle membrane;0.0109472130213278!GO:0006955;immune response;0.0109911333860251!GO:0030663;COPI coated vesicle membrane;0.0110998571719619!GO:0030126;COPI vesicle coat;0.0110998571719619!GO:0048468;cell development;0.0111028084055267!GO:0051789;response to protein stimulus;0.0113179958718718!GO:0006986;response to unfolded protein;0.0113179958718718!GO:0031625;ubiquitin protein ligase binding;0.0114852608293467!GO:0000096;sulfur amino acid metabolic process;0.0116331114386051!GO:0006383;transcription from RNA polymerase III promoter;0.0118075815258439!GO:0006733;oxidoreduction coenzyme metabolic process;0.0122345822995655!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0122385906523658!GO:0045047;protein targeting to ER;0.0122385906523658!GO:0022406;membrane docking;0.0123228541760622!GO:0048278;vesicle docking;0.0123228541760622!GO:0046914;transition metal ion binding;0.012325524360166!GO:0048471;perinuclear region of cytoplasm;0.0123525293559586!GO:0006689;ganglioside catabolic process;0.0127022379605838!GO:0035035;histone acetyltransferase binding;0.0127319713769285!GO:0050662;coenzyme binding;0.0128172446990309!GO:0030137;COPI-coated vesicle;0.0135880664392318!GO:0048487;beta-tubulin binding;0.0138747095775333!GO:0016859;cis-trans isomerase activity;0.0139294495886642!GO:0016301;kinase activity;0.0142587542781983!GO:0017166;vinculin binding;0.0143443204386998!GO:0046483;heterocycle metabolic process;0.0146639295740427!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0146941813181309!GO:0042802;identical protein binding;0.0148016058002783!GO:0006749;glutathione metabolic process;0.0148562315225749!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0149762852861364!GO:0030119;AP-type membrane coat adaptor complex;0.0152171936409589!GO:0004563;beta-N-acetylhexosaminidase activity;0.015402124875201!GO:0060090;molecular adaptor activity;0.0154243009223584!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0154243009223584!GO:0015002;heme-copper terminal oxidase activity;0.0154243009223584!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0154243009223584!GO:0004129;cytochrome-c oxidase activity;0.0154243009223584!GO:0030984;kininogen binding;0.015434293850117!GO:0004213;cathepsin B activity;0.015434293850117!GO:0042158;lipoprotein biosynthetic process;0.0154388240507031!GO:0000059;protein import into nucleus, docking;0.0154925040516765!GO:0006497;protein amino acid lipidation;0.0157709689780608!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0157794128472988!GO:0019904;protein domain specific binding;0.0158906471991122!GO:0051920;peroxiredoxin activity;0.0159793265171722!GO:0000209;protein polyubiquitination;0.0161683563289859!GO:0046578;regulation of Ras protein signal transduction;0.0162160452821579!GO:0051098;regulation of binding;0.0163575627232998!GO:0019362;pyridine nucleotide metabolic process;0.0173899666836034!GO:0000278;mitotic cell cycle;0.0174585257345613!GO:0045185;maintenance of protein localization;0.0175690358779004!GO:0006405;RNA export from nucleus;0.0177213532823337!GO:0008287;protein serine/threonine phosphatase complex;0.0177556790864919!GO:0015630;microtubule cytoskeleton;0.0180737332736678!GO:0019843;rRNA binding;0.0181392076171924!GO:0000314;organellar small ribosomal subunit;0.0184101553117653!GO:0005763;mitochondrial small ribosomal subunit;0.0184101553117653!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0187277456108877!GO:0006904;vesicle docking during exocytosis;0.0188161706065479!GO:0006661;phosphatidylinositol biosynthetic process;0.0190449725161727!GO:0051287;NAD binding;0.0192758322995879!GO:0006769;nicotinamide metabolic process;0.0193202173030134!GO:0030131;clathrin adaptor complex;0.0197970234515055!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0202339242116574!GO:0008139;nuclear localization sequence binding;0.0207121536495925!GO:0030145;manganese ion binding;0.0209175501135306!GO:0045892;negative regulation of transcription, DNA-dependent;0.0209613893162088!GO:0006302;double-strand break repair;0.0210808213319303!GO:0006350;transcription;0.0212516661742578!GO:0003711;transcription elongation regulator activity;0.0212703031394897!GO:0006352;transcription initiation;0.0214827269784209!GO:0043681;protein import into mitochondrion;0.0215731554196273!GO:0008312;7S RNA binding;0.0216675657371183!GO:0005637;nuclear inner membrane;0.0216675657371183!GO:0004218;cathepsin S activity;0.0221528389777162!GO:0006629;lipid metabolic process;0.0226756293427024!GO:0006509;membrane protein ectodomain proteolysis;0.0228714623845441!GO:0033619;membrane protein proteolysis;0.0228714623845441!GO:0006914;autophagy;0.0231225697354111!GO:0019318;hexose metabolic process;0.0232533511478745!GO:0051223;regulation of protein transport;0.0232533511478745!GO:0050749;apolipoprotein E receptor binding;0.0242180145768508!GO:0051090;regulation of transcription factor activity;0.0243892766091622!GO:0006740;NADPH regeneration;0.0246262418252492!GO:0006098;pentose-phosphate shunt;0.0246262418252492!GO:0005869;dynactin complex;0.024930572440699!GO:0001816;cytokine production;0.0250568952510188!GO:0032507;maintenance of cellular protein localization;0.0252487578920497!GO:0007006;mitochondrial membrane organization and biogenesis;0.0254888957423458!GO:0016798;hydrolase activity, acting on glycosyl bonds;0.0254888957423458!GO:0018193;peptidyl-amino acid modification;0.0256349992438546!GO:0030258;lipid modification;0.0259569680904682!GO:0008270;zinc ion binding;0.0259569680904682!GO:0033033;negative regulation of myeloid cell apoptosis;0.0259569680904682!GO:0001803;regulation of type III hypersensitivity;0.0259569680904682!GO:0032733;positive regulation of interleukin-10 production;0.0259569680904682!GO:0033025;regulation of mast cell apoptosis;0.0259569680904682!GO:0001805;positive regulation of type III hypersensitivity;0.0259569680904682!GO:0033023;mast cell homeostasis;0.0259569680904682!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0259569680904682!GO:0033032;regulation of myeloid cell apoptosis;0.0259569680904682!GO:0001802;type III hypersensitivity;0.0259569680904682!GO:0033028;myeloid cell apoptosis;0.0259569680904682!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0259569680904682!GO:0033026;negative regulation of mast cell apoptosis;0.0259569680904682!GO:0033024;mast cell apoptosis;0.0259569680904682!GO:0045309;protein phosphorylated amino acid binding;0.0264056940921258!GO:0004576;oligosaccharyl transferase activity;0.0269375789286001!GO:0019752;carboxylic acid metabolic process;0.0271021430189657!GO:0002250;adaptive immune response;0.0271021430189657!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0271021430189657!GO:0005996;monosaccharide metabolic process;0.0271498537703669!GO:0006026;aminoglycan catabolic process;0.0273535387237614!GO:0006027;glycosaminoglycan catabolic process;0.0273535387237614!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0282324009286737!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0284038407952482!GO:0008250;oligosaccharyl transferase complex;0.0289468496398776!GO:0019058;viral infectious cycle;0.0290231896802712!GO:0006376;mRNA splice site selection;0.0293824009120437!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0293824009120437!GO:0005905;coated pit;0.0297669557551058!GO:0004192;cathepsin D activity;0.0299088484717481!GO:0006082;organic acid metabolic process;0.0299088484717481!GO:0004559;alpha-mannosidase activity;0.0299210641190187!GO:0006414;translational elongation;0.0300424572346773!GO:0035258;steroid hormone receptor binding;0.0309108536376414!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0309460847100557!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0309953908823509!GO:0051539;4 iron, 4 sulfur cluster binding;0.0310031913793289!GO:0016584;nucleosome positioning;0.0317392928842142!GO:0012506;vesicle membrane;0.032089715548091!GO:0006338;chromatin remodeling;0.0324850882895663!GO:0006892;post-Golgi vesicle-mediated transport;0.0324850882895663!GO:0019747;regulation of isoprenoid metabolic process;0.0327368797231603!GO:0045637;regulation of myeloid cell differentiation;0.032769341320137!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0328093113795703!GO:0047485;protein N-terminus binding;0.032879214943236!GO:0003899;DNA-directed RNA polymerase activity;0.0332041596906232!GO:0004553;hydrolase activity, hydrolyzing O-glycosyl compounds;0.0340651597527293!GO:0005684;U2-dependent spliceosome;0.0342268577264517!GO:0051452;cellular pH reduction;0.0342268577264517!GO:0051453;regulation of cellular pH;0.0342268577264517!GO:0045851;pH reduction;0.0342268577264517!GO:0051092;activation of NF-kappaB transcription factor;0.0347156083233028!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0348895385629336!GO:0030029;actin filament-based process;0.0352489329637093!GO:0030132;clathrin coat of coated pit;0.0355083881809149!GO:0006622;protein targeting to lysosome;0.0355083881809149!GO:0030522;intracellular receptor-mediated signaling pathway;0.0355521534732843!GO:0005057;receptor signaling protein activity;0.035726429321001!GO:0006979;response to oxidative stress;0.0358994283196402!GO:0000303;response to superoxide;0.0368266444042434!GO:0051059;NF-kappaB binding;0.0369255889138343!GO:0004518;nuclease activity;0.0370825419590257!GO:0042168;heme metabolic process;0.0371239401158887!GO:0042585;germinal vesicle;0.0372556825746141!GO:0002440;production of molecular mediator of immune response;0.0372804036449966!GO:0016860;intramolecular oxidoreductase activity;0.0378610949002248!GO:0006778;porphyrin metabolic process;0.038132304213023!GO:0033013;tetrapyrrole metabolic process;0.038132304213023!GO:0001573;ganglioside metabolic process;0.0382669398341659!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0389124665523401!GO:0044438;microbody part;0.0390279439133774!GO:0044439;peroxisomal part;0.0390279439133774!GO:0019079;viral genome replication;0.0393424571838273!GO:0016605;PML body;0.0394290252663043!GO:0005784;translocon complex;0.0394290252663043!GO:0051056;regulation of small GTPase mediated signal transduction;0.0394524824519282!GO:0030503;regulation of cell redox homeostasis;0.039832823381091!GO:0005097;Rab GTPase activator activity;0.0400374550974345!GO:0046488;phosphatidylinositol metabolic process;0.0400374550974345!GO:0032763;regulation of mast cell cytokine production;0.0402068109489106!GO:0032762;mast cell cytokine production;0.0402068109489106!GO:0046966;thyroid hormone receptor binding;0.0404924525021012!GO:0031124;mRNA 3'-end processing;0.0408838069322143!GO:0030880;RNA polymerase complex;0.042141790542614!GO:0032313;regulation of Rab GTPase activity;0.0422883430943102!GO:0032483;regulation of Rab protein signal transduction;0.0422883430943102!GO:0032482;Rab protein signal transduction;0.0422883430943102!GO:0016581;NuRD complex;0.0423386266974495!GO:0000339;RNA cap binding;0.0425216439466427!GO:0051651;maintenance of cellular localization;0.0425535591375635!GO:0008017;microtubule binding;0.0429491615658558!GO:0001784;phosphotyrosine binding;0.0437385743112996!GO:0051087;chaperone binding;0.0437637401737872!GO:0032319;regulation of Rho GTPase activity;0.0441358027026583!GO:0051540;metal cluster binding;0.0445444944573749!GO:0051536;iron-sulfur cluster binding;0.0445444944573749!GO:0030521;androgen receptor signaling pathway;0.0445444944573749!GO:0030125;clathrin vesicle coat;0.0445444944573749!GO:0030665;clathrin coated vesicle membrane;0.0445444944573749!GO:0045947;negative regulation of translational initiation;0.0449456815409214!GO:0051219;phosphoprotein binding;0.0453926335763802!GO:0045545;syndecan binding;0.0453926335763802!GO:0005895;interleukin-5 receptor complex;0.0453926335763802!GO:0016741;transferase activity, transferring one-carbon groups;0.0455397353253384!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0457136550269463!GO:0006458;'de novo' protein folding;0.0460124893541267!GO:0051084;'de novo' posttranslational protein folding;0.0460124893541267!GO:0008637;apoptotic mitochondrial changes;0.0462961612315473!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0469011026016568!GO:0007050;cell cycle arrest;0.0469186402520334!GO:0002443;leukocyte mediated immunity;0.0471463089542079!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0471463089542079!GO:0006487;protein amino acid N-linked glycosylation;0.0472714183619046!GO:0008320;protein transmembrane transporter activity;0.0472930846334616!GO:0045767;regulation of anti-apoptosis;0.0475691691631996!GO:0016408;C-acyltransferase activity;0.0475691691631996!GO:0033157;regulation of intracellular protein transport;0.0475929339523407!GO:0042306;regulation of protein import into nucleus;0.0475929339523407!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0476304712055672!GO:0006013;mannose metabolic process;0.0478965347179023!GO:0006739;NADP metabolic process;0.0479163076559783!GO:0007032;endosome organization and biogenesis;0.0493021639463178!GO:0005669;transcription factor TFIID complex;0.0493331922659588!GO:0008168;methyltransferase activity;0.0495124272426399
 +
|sample_id=11386
 +
|sample_note=former endothelial progenitor cells
 +
|sample_sex=male
 +
|sample_species=Human (Homo sapiens)
 +
|sample_strain=
 +
|sample_tissue=blood
 +
|top_motifs=SREBF1,2:3.59320737564;TLX2:2.31425201817;STAT1,3:1.6670426284;EN1,2:1.4975863367;RXRA_VDR{dimer}:1.43483223894;IKZF2:1.33399451742;SPIB:1.31947305056;DMAP1_NCOR{1,2}_SMARC:1.29576435909;IRF1,2:1.21854576005;SPI1:1.20562464209;ELF1,2,4:1.20562451603;IRF7:1.20454978578;AR:1.09851745186;ETS1,2:0.975387412527;RORA:0.949744121685;MAFB:0.909146536405;FOXO1,3,4:0.879162826472;NFE2L2:0.877023767156;TGIF1:0.865479055295;NKX2-2,8:0.838704563917;NFIX:0.772807007922;ARID5B:0.76232818431;FOX{F1,F2,J1}:0.731395657862;NFIL3:0.71606207183;HNF4A_NR2F1,2:0.712907760278;FOX{D1,D2}:0.670985883712;EBF1:0.666027705168;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.590048857119;RUNX1..3:0.562903075591;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.535434039494;CUX2:0.534152909667;VSX1,2:0.532570157566;STAT2,4,6:0.529750364468;NANOG{mouse}:0.519264620993;T:0.509537641735;ESR1:0.502721683153;PAX1,9:0.497881768109;FOXA2:0.490768707488;PAX2:0.440484043879;PDX1:0.415356694385;TFCP2:0.380215159438;FOXN1:0.367891015059;CEBPA,B_DDIT3:0.35690424201;FOXP1:0.316585757723;HMX1:0.305698363028;NKX3-2:0.300357960996;EP300:0.298226518309;PAX8:0.265610737832;ZBTB16:0.261465841405;NHLH1,2:0.234604861759;PRRX1,2:0.231069923107;CDX1,2,4:0.225309190199;FOXP3:0.220436999656;FOXD3:0.213920039065;MYFfamily:0.209065670573;GATA4:0.202112009478;NR6A1:0.195358154521;SMAD1..7,9:0.174449376325;PAX6:0.16918553711;FOX{I1,J2}:0.167573374108;ESRRA:0.165244964209;PRDM1:0.155951261652;TFAP4:0.145479099094;NKX2-3_NKX2-5:0.115047356588;HAND1,2:0.110603466379;POU5F1:0.092363014363;OCT4_SOX2{dimer}:0.0912232327252;BPTF:0.0743591048548;GATA6:0.0637152680595;YY1:0.0608524665349;HBP1_HMGB_SSRP1_UBTF:0.0525508870599;ELK1,4_GABP{A,B1}:0.0511384546536;HLF:0.0412921638096;STAT5{A,B}:0.0398394420832;NFE2:0.0329033168976;MYOD1:0.0170034798492;MYB:-0.0139643021222;ADNP_IRX_SIX_ZHX:-0.0243905646634;NFKB1_REL_RELA:-0.04753568793;TAL1_TCF{3,4,12}:-0.0584647914489;NRF1:-0.059060784278;DBP:-0.0801393797923;SPZ1:-0.083630676397;RBPJ:-0.0888247530108;NR5A1,2:-0.0922535846633;ZNF143:-0.0961818224736;ZNF238:-0.109415690439;RXR{A,B,G}:-0.115666422007;HMGA1,2:-0.141603592562;RFX2..5_RFXANK_RFXAP:-0.149603718782;MTF1:-0.174693075381;NANOG:-0.210572185092;PAX5:-0.210803102273;TOPORS:-0.212775449967;TFAP2{A,C}:-0.223485637803;SP1:-0.224398734547;ZFP161:-0.229312766628;PITX1..3:-0.230889548189;HSF1,2:-0.239630861099;NKX6-1,2:-0.249847265629;LHX3,4:-0.250094601242;ALX1:-0.264091964578;FOSL2:-0.288367494948;ATF4:-0.299349462051;FOXQ1:-0.308135105634;KLF4:-0.308639892812;LMO2:-0.316968093481;MZF1:-0.323572797201;MAZ:-0.330033559888;MED-1{core}:-0.365513489261;SOX2:-0.372066288146;EVI1:-0.372468602955;ZNF148:-0.395969414696;HNF1A:-0.418787979306;GLI1..3:-0.418940966816;PAX4:-0.420599543117;bHLH_family:-0.420836164763;EGR1..3:-0.443222081044;HES1:-0.454746247029;POU1F1:-0.462757450649;REST:-0.463773087908;ATF5_CREB3:-0.477549607362;PPARG:-0.478988843415;CRX:-0.482795072477;PATZ1:-0.485260846629;FOS_FOS{B,L1}_JUN{B,D}:-0.493592926969;ATF2:-0.517290355725;BREu{core}:-0.541479874912;AHR_ARNT_ARNT2:-0.559475555104;SOX{8,9,10}:-0.56049037557;HOX{A4,D4}:-0.573853578082;BACH2:-0.573915906221;AIRE:-0.594905116715;CREB1:-0.623027228633;NR3C1:-0.634596438655;GTF2I:-0.648969439053;ZBTB6:-0.658140128253;HIF1A:-0.663376416923;PAX3,7:-0.685653870463;ZEB1:-0.694773496594;MTE{core}:-0.702422145669;LEF1_TCF7_TCF7L1,2:-0.708117505744;NFATC1..3:-0.711366154913;TLX1..3_NFIC{dimer}:-0.723195799057;GZF1:-0.733115019578;SOX5:-0.74523274756;E2F1..5:-0.754201033652;ALX4:-0.754521372052;XBP1:-0.766708608286;SNAI1..3:-0.769354193551;XCPE1{core}:-0.77410848361;ZNF423:-0.791455060206;HOX{A5,B5}:-0.794931131344;IKZF1:-0.797007735834;MYBL2:-0.838509701337;SOX17:-0.83976622766;HIC1:-0.841743375802;HOX{A6,A7,B6,B7}:-0.846979142348;TFDP1:-0.849407168113;TFAP2B:-0.856369628977;GFI1B:-0.861395553414;MEF2{A,B,C,D}:-0.893319893444;NFY{A,B,C}:-0.90962382597;GTF2A1,2:-0.930357062249;RREB1:-0.969255816206;HOXA9_MEIS1:-1.04120832003;GFI1:-1.06048627278;UFEwm:-1.0810092918;TEAD1:-1.11838275801;FOXM1:-1.12215822174;CDC5L:-1.12435087519;GCM1,2:-1.1402323025;ATF6:-1.18217614687;POU3F1..4:-1.19418379064;NFE2L1:-1.19584404239;TBP:-1.25522821834;NR1H4:-1.27814521235;POU6F1:-1.28518271553;TP53:-1.30910989252;RFX1:-1.32932135042;POU2F1..3:-1.39291923216;SRF:-1.42509571733;NKX3-1:-1.43178705994;PBX1:-1.43516043151;NKX2-1,4:-1.56654875673;TEF:-1.65962011368;ZNF384:-1.66375362937;JUN:-1.69706289228;ONECUT1,2:-1.82674467184;FOXL1:-1.98384228776;TBX4,5:-2.06873620823;ZIC1..3:-2.20316489384
 +
|xref=
 +
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11386-118B9;search_select_hide=table117:FF:11386-118B9
 
}}
 
}}

Latest revision as of 08:56, 4 June 2020

Name:CD14+ monocyte derived endothelial progenitor cells, donor3
Species:Human (Homo sapiens)
Library ID:CNhs11904
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stage46 years old adult
sexmale
age46
cell typeblood vessel endothelial progenitor cell
cell lineNA
company3HBiomedical
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberEPC724
catalog number3H100-81-10
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004934
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11904 CAGE DRX008131 DRR009003
Accession ID Hg19

Library idBAMCTSS
CNhs11904 DRZ000428 DRZ001813
Accession ID Hg38

Library idBAMCTSS
CNhs11904 DRZ011778 DRZ013163
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00004934
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10009.GTGGCC sRNA-Seq DRX037143 DRR041509
Accession ID Hg19

Library idBAMCTSS
SRhi10009.GTGGCC DRZ007151


Relative expression to median (log10)


Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis--0.175
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma--0.247
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.687
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0995
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.225
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.00649
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle--0.343
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.584
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0741
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.0287
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus--0.7
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.761
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.309
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.0339
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth--0.0585
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.0995
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small--0.587
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature7.66873e-4
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral1.335
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.0527
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.359
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.359
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0.0995
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung1.13
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.406
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0.0995
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample


JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in this sample. Pearson's correlation between the number of TFBSs estimated by using the position-weight matrix for each promoter and its expression is expressed as Z-score by taking the ones based on random position-weight matrix, and the tail probability of the normal distribution corresponding to the Z-score is taken as the resulting P-value. Lower P-value indicates more (non-random) association of the motif to promoter expression
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs11904

Jaspar motif P-value
MA0002.2 3.89423e-5
MA0003.1 0.204
MA0004.1 0.116
MA0006.1 0.704
MA0007.1 0.0719
MA0009.1 0.0852
MA0014.1 0.481
MA0017.1 2.6241e-4
MA0018.2 7.31345e-4
MA0019.1 0.648
MA0024.1 0.00458
MA0025.1 0.905
MA0027.1 0.526
MA0028.1 0.176
MA0029.1 0.716
MA0030.1 0.585
MA0031.1 0.269
MA0035.2 0.854
MA0038.1 0.209
MA0039.2 0.475
MA0040.1 0.638
MA0041.1 0.507
MA0042.1 0.753
MA0043.1 0.0157
MA0046.1 0.863
MA0047.2 0.0286
MA0048.1 0.154
MA0050.1 4.14589e-7
MA0051.1 0.0166
MA0052.1 0.0263
MA0055.1 0.214
MA0057.1 0.926
MA0058.1 0.00442
MA0059.1 0.731
MA0060.1 3.19107e-6
MA0061.1 0.184
MA0062.2 4.43869e-6
MA0065.2 0.0252
MA0066.1 0.168
MA0067.1 0.122
MA0068.1 0.297
MA0069.1 0.634
MA0070.1 0.0671
MA0071.1 0.192
MA0072.1 0.715
MA0073.1 0.396
MA0074.1 0.144
MA0076.1 0.167
MA0077.1 0.486
MA0078.1 0.646
MA0079.2 0.0279
MA0080.2 3.60226e-18
MA0081.1 1.18292e-4
MA0083.1 3.37209e-4
MA0084.1 0.301
MA0087.1 0.342
MA0088.1 0.34
MA0090.1 0.0145
MA0091.1 0.173
MA0092.1 0.998
MA0093.1 0.104
MA0099.2 0.218
MA0100.1 0.986
MA0101.1 0.745
MA0102.2 0.00121
MA0103.1 0.828
MA0104.2 0.953
MA0105.1 0.0424
MA0106.1 0.223
MA0107.1 0.824
MA0108.2 3.32226e-11
MA0111.1 0.186
MA0112.2 0.00205
MA0113.1 0.141
MA0114.1 0.00876
MA0115.1 0.628
MA0116.1 1.78979e-4
MA0117.1 0.706
MA0119.1 0.931
MA0122.1 0.496
MA0124.1 0.255
MA0125.1 0.459
MA0131.1 0.355
MA0135.1 0.192
MA0136.1 5.77955e-16
MA0137.2 0.00766
MA0138.2 0.971
MA0139.1 0.85
MA0140.1 0.984
MA0141.1 0.0327
MA0142.1 0.146
MA0143.1 0.0535
MA0144.1 0.0116
MA0145.1 0.22
MA0146.1 0.0362
MA0147.1 0.452
MA0148.1 0.396
MA0149.1 0.285
MA0150.1 0.0794
MA0152.1 0.389
MA0153.1 0.167
MA0154.1 0.00223
MA0155.1 0.924
MA0156.1 5.19765e-11
MA0157.1 0.0655
MA0159.1 0.0551
MA0160.1 0.0301
MA0162.1 0.795
MA0163.1 2.31129e-5
MA0164.1 0.597
MA0258.1 0.00383
MA0259.1 0.186



FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in 169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs11904

Novel motif P-value
1 0.198
10 0.0453
100 0.738
101 0.257
102 0.714
103 0.103
104 0.93
105 0.39
106 0.136
107 0.533
108 0.862
109 0.114
11 0.144
110 0.46
111 0.0434
112 0.415
113 0.823
114 0.0451
115 0.139
116 0.968
117 0.0199
118 0.426
119 0.0378
12 0.442
120 0.431
121 0.884
122 0.253
123 0.041
124 0.234
125 0.345
126 0.0789
127 0.11
128 0.0883
129 0.957
13 0.0916
130 0.872
131 0.476
132 0.695
133 0.986
134 0.565
135 0.342
136 0.726
137 0.00869
138 0.103
139 0.0421
14 0.133
140 0.0922
141 0.619
142 0.215
143 0.454
144 0.31
145 0.402
146 0.896
147 0.216
148 0.0249
149 0.745
15 0.24
150 0.467
151 0.803
152 0.634
153 0.615
154 0.84
155 0.264
156 0.84
157 0.38
158 0.654
159 0.21
16 0.345
160 0.99
161 0.331
162 0.538
163 0.548
164 0.207
165 0.159
166 0.477
167 0.578
168 0.294
169 0.0588
17 0.382
18 0.572
19 0.255
2 0.761
20 0.955
21 0.447
22 0.126
23 0.456
24 0.0331
25 0.461
26 0.114
27 0.132
28 0.49
29 0.323
3 0.0173
30 0.703
31 0.346
32 0.86
33 0.851
34 0.268
35 0.332
36 0.251
37 0.185
38 0.103
39 0.886
4 0.827
40 0.314
41 0.144
42 0.353
43 0.1
44 0.67
45 0.448
46 0.199
47 0.517
48 0.295
49 0.136
5 0.2
50 0.682
51 0.529
52 0.275
53 0.158
54 0.359
55 0.0396
56 0.734
57 0.596
58 0.0885
59 0.116
6 0.465
60 0.0792
61 0.158
62 0.126
63 0.344
64 0.435
65 0.151
66 0.841
67 0.107
68 0.456
69 0.878
7 0.16
70 0.0393
71 0.0767
72 0.264
73 0.101
74 0.706
75 0.0339
76 0.294
77 0.286
78 0.116
79 0.437
8 0.273
80 0.138
81 0.234
82 0.0808
83 0.579
84 0.785
85 0.0507
86 0.0171
87 0.118
88 0.253
89 0.439
9 0.288
90 0.0198
91 0.868
92 0.0644
93 0.878
94 0.111
95 0.735
96 0.159
97 0.801
98 0.369
99 0.47



de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown.
Analyst:NA
library id: CNhs11904


FANTOM5 (FF) ontology


Direct parent terms


Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship
Analyst: Hideya Kawaji

link to source data
data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002320 (connective tissue cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000213 (lining cell)
0000766 (myeloid leukocyte)
0002078 (meso-epithelial cell)
0000219 (motile cell)
0000215 (barrier cell)
0000134 (mesenchymal cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000034 (stem cell)
0000576 (monocyte)
0000115 (endothelial cell)
0000566 (angioblastic mesenchymal cell)
0002619 (adult endothelial progenitor cell)

UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000248 (human endothelial progenitor cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship
Analyst: Hideya Kawaji

link to source data
data

CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0000222 (mesodermal cell)