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{{f5samples
 
{{f5samples
|id=FF:11460-119B2
+
|DRA_sample_Accession=CAGE@SAMD00005402
|name=Fibroblast - Cardiac, donor6
+
|accession_numbers=CAGE;DRX008248;DRR009120;DRZ000545;DRZ001930;DRZ011895;DRZ013280
|sample_id=11460
+
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007100,UBERON:0000948,UBERON:0002384,UBERON:0000479,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0010317,UBERON:0004535,UBERON:0001009
|rna_tube_id=119B2
+
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0002494,CL:0000057,CL:0002548
|rna_box=119
 
|rna_position=B2
 
|sample_cell_lot=N/A
 
|sample_cell_catalog=N/A
 
|sample_company=Sciencell/3H
 
|rna_lot_number=2151
 
|rna_catalog_number=SC6305
 
|sample_species=Human (Homo sapiens)
 
|sample_strain=
 
|sample_dev_stage=fetus
 
|sample_tissue=heart
 
|sample_donor(cell lot)=
 
|sample_sex=unknown
 
|sample_age=fetal
 
|sample_ethnicity=unknown
 
|rna_rin=
 
|rna_od260/230=
 
|rna_od260/280=
 
|sample_cell_type=fibroblast
 
|sample_cell_line=
 
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
 
|sample_experimental_condition=
 
|sample_disease=
 
|rna_sample_type=total RNA
 
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
 
|rna_weight_ug=10
 
|rna_concentration=0.607
 
|sample_note=
 
|profile_hcage=CNhs12061,LSID838,release011,COMPLETED
 
|profile_cagescan=,,,
 
|profile_srnaseq=,,,
 
|profile_rnaseq=,,,
 
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000055,CL:0000057,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000723,CL:0002320,CL:0002371,CL:0002494,CL:0002548
 
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000061,UBERON:0000062,UBERON:0000119,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000948,UBERON:0001009,UBERON:0001048,UBERON:0001062,UBERON:0002050,UBERON:0002384,UBERON:0002532,UBERON:0003081,UBERON:0003084,UBERON:0003914,UBERON:0004120,UBERON:0004140,UBERON:0004141,UBERON:0004291,UBERON:0004535,UBERON:0004872,UBERON:0005291,UBERON:0005423,UBERON:0005498,UBERON:0007005,UBERON:0007100
 
 
|ancestors_in_disease_facet=
 
|ancestors_in_disease_facet=
|sample_description=
+
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000057,FF:0000001,FF:0000059
 +
|comment=
 +
|created_by=tmeehan
 +
|creation_date=2011-06-15T12:34:29Z
 +
|data_phase=2
 +
|datafreeze_phase=2
 +
|def="A fibroblast from cardiac tissue." [GOC:tfm]
 +
|expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!1.80!62.12!TCF21;;chr8:55370487..55370503,+!p1@SOX17!1.80!61.79!SOX17;;chr19:46801639..46801699,+!p1@HIF3A!1.78!58.68!HIF3A;;chr7:35293685..35293718,-!p1@TBX20!1.70!48.55!TBX20;;chr8:11561684..11561751,+!p1@GATA4!1.57!36.29!GATA4;;chr4:174451370..174451387,-!p1@HAND2!1.41!24.68!HAND2;;chr3:141087393..141087426,+!p3@ZBTB38!1.32!77.15!ZBTB38;;chr8:106330656..106330684,+!p1@ZFPM2!1.20!38.25!ZFPM2;;chr17:1959369..1959388,+!p2@HIC1!1.17!36.45!HIC1;;chr20:62680984..62680999,-!p1@SOX18!1.17!18.47!SOX18;;chr12:66218255..66218304,+!p3@HMGA2!1.09!30.89!HMGA2;;chr12:66218598..66218645,+!p2@HMGA2!1.08!50.84!HMGA2;;chr18:19749541..19749557,+!p1@GATA6!1.05!32.37!GATA6;;chr18:19749386..19749404,+!p2@GATA6!1.05!14.71!GATA6;;chr12:66218183..66218209,+!p4@HMGA2!1.04!19.45!HMGA2;;chr10:131762504..131762555,-!p1@EBF3!1.04!9.97!EBF3;;chr6:85474299..85474324,-!p1@TBX18!1.01!16.67!TBX18;;chr12:66218836..66218888,+!p1@HMGA2!1.00!86.80!HMGA2;;chr18:53068911..53068935,-!p4@TCF4!1.00!10.13!TCF4;;chr1:158975744..158975769,+!p10@IFI16!0.99!8.66!IFI16;;chr11:113930425..113930471,+!p1@ZBTB16!0.98!12.59!ZBTB16;;chr1:170633262..170633285,+!p3@PRRX1!0.98!9.81!PRRX1;;chrY:21906594..21906622,-!p1@KDM5D!0.97!8.34!KDM5D;;chr12:66218212..66218244,+!p5@HMGA2!0.92!10.95!HMGA2;;chr8:106330696..106330719,+!p2@ZFPM2!0.92!9.48!ZFPM2;;chr7:19157248..19157268,-!p1@TWIST1!0.91!20.60!TWIST1;;chr1:170633348..170633399,+!p2@PRRX1!0.91!9.81!PRRX1;;chr2:46612334..46612349,+!p6@EPAS1!0.91!9.64!EPAS1;;chr21:39870339..39870443,-!p1@ERG!0.91!7.19!ERG;;chr4:174450089..174450153,-!p2@HAND2!0.89!6.70!HAND2;;chrY:2803415..2803468,+!p1@ZFY!0.87!6.38!ZFY;;chr11:32457075..32457095,-!p1@WT1!0.87!6.38!WT1;;chr15:57511609..57511651,+!p2@TCF12!0.86!10.95!TCF12;;chr9:16705069..16705086,-!p3@BNC2!0.86!6.21!BNC2;;chr20:42543441..42543497,+!p1@TOX2!0.84!28.12!TOX2;;chr20:30193083..30193098,+!p1@ID1!0.83!505.75!ID1;;chr10:94449703..94449718,+!p1@HHEX!0.82!23.21!HHEX;;chr1:170632285..170632309,+!p1@PRRX1!0.82!6.38!PRRX1;;chr3:141087454..141087465,+!p19@ZBTB38!0.82!5.56!ZBTB38;;chr2:85980951..85981004,+!p1@ATOH8!0.80!8.99!ATOH8;;chr3:169381420..169381535,-!p1@MECOM!0.80!6.38!MECOM;;chr14:62162258..62162269,+!p2@HIF1A!0.79!54.11!HIF1A;;chr20:42543506..42543549,+!p2@TOX2!0.79!13.24!TOX2;;chr18:53257001..53257015,-!p5@TCF4!0.79!9.32!TCF4;;chr19:47523058..47523114,+!p1@NPAS1!0.77!4.90!NPAS1;;chr12:66218904..66218913,+!p11@HMGA2!0.76!4.74!HMGA2;;chr3:141087339..141087387,+!p2@ZBTB38!0.75!52.47!ZBTB38;;chr5:92918919..92918942,+!p1@NR2F1!0.75!22.88!NR2F1;;chr11:61520075..61520136,+!p1@C11orf9!0.75!10.46!C11orf9;;chr9:14314131..14314147,-!p2@NFIB!0.74!27.95!NFIB;;chr14:62162285..62162296,+!p3@HIF1A!0.74!25.99!HIF1A;;chr9:14314566..14314618,-!p1@NFIB!0.73!59.01!NFIB;;chr11:46299199..46299233,+!p1@CREB3L1!0.73!25.34!CREB3L1;;chr1:23885981..23886002,-!p1@ID3!0.72!833.49!ID3;;chr15:37392724..37392757,-!p1@MEIS2!0.71!20.92!MEIS2;;chr12:115122318..115122331,-!p2@TBX3!0.71!4.09!TBX3;;chr19:58373157..58373159,+!p4@ZNF587!0.70!7.68!ZNF587;;chr12:66218152..66218174,+!p10@HMGA2!0.69!4.25!HMGA2;;chr2:102091144..102091183,-!p2@RFX8!0.69!3.92!RFX8;;chr3:168864315..168864339,-!p2@MECOM!0.68!6.70!MECOM;;chr6:85473156..85473210,-!p2@TBX18!0.68!4.74!TBX18;;chr1:170632959..170632987,+!p4@PRRX1!0.68!4.25!PRRX1;;chr2:46524537..46524553,+!p1@EPAS1!0.67!425.33!EPAS1;;chr12:66218378..66218401,+!p6@HMGA2!0.67!6.05!HMGA2;;chr15:66994561..66994597,+!p2@SMAD6!0.66!9.48!SMAD6;;chr2:239756739..239756755,+!p2@TWIST2!0.66!6.54!TWIST2;;chr4:174451350..174451363,-!p3@HAND2!0.66!3.60!HAND2;;chr12:3069037..3069119,+!p2@TEAD4!0.65!13.57!TEAD4;;chr1:200008734..200008765,+!p2@NR5A2!0.65!3.43!NR5A2;;chr2:19558373..19558392,-!p1@OSR1!0.64!10.30!OSR1;;chr11:46299539..46299620,+!p2@CREB3L1!0.64!6.21!CREB3L1;;chr1:158985493..158985535,+!p4@IFI16!0.64!5.56!IFI16;;chr18:53255415..53255491,-!p1@TCF4!0.63!32.69!TCF4;;chr8:49833948..49833973,-!p2@SNAI2!0.63!24.52!SNAI2;;chr15:37392616..37392638,-!p2@MEIS2!0.63!11.61!MEIS2;;chr11:128563948..128564003,+!p1@FLI1!0.62!45.44!FLI1;;chr9:73029219..73029289,-!p2@KLF9!0.62!10.95!KLF9;;chr3:128206762..128206781,-!p2@GATA2!0.61!22.72!GATA2;;chr6:19837592..19837621,+!p1@ID4!0.61!22.23!ID4;;chr12:96588368..96588394,+!p3@ELK3!0.61!9.48!ELK3;;chr15:66994663..66994680,+!p1@SMAD6!0.61!8.17!SMAD6;;chr8:77593750..77593757,+!p3@ZFHX4!0.61!3.11!ZFHX4;;chr8:49833978..49833996,-!p1@SNAI2!0.60!75.36!SNAI2;;chr7:19157043..19157088,-!p2@TWIST1!0.60!8.66!TWIST1;;chr1:23696308..23696339,-!p2@ZNF436!0.60!7.19!ZNF436;;chr18:19749517..19749531,+!p3@GATA6!0.60!5.88!GATA6;;chr11:113930291..113930339,+!p2@ZBTB16!0.60!5.39!ZBTB16;;chr14:74256787..74256858,-!p6@C14orf43!0.60!2.94!C14orf43;;chr15:66995062..66995065,+!p8@SMAD6!0.60!2.94!SMAD6;;chr8:10588010..10588030,-!p1@SOX7!0.60!2.94!SOX7;;chr9:16870710..16870763,-!p1@BNC2!0.59!5.56!BNC2;;chr2:85980919..85980942,+!p4@ATOH8!0.59!3.11!ATOH8;;chr6:34204921..34204939,+!p3@HMGA1!0.58!103.47!HMGA1;;chr7:44143925..44143970,+!p1@AEBP1!0.58!77.64!AEBP1;;chr20:42295745..42295765,+!p1@MYBL2!0.58!56.39!MYBL2;;chr17:1958388..1958404,+!p1@HIC1!0.58!21.41!HIC1;;chr11:113930401..113930422,+!p3@ZBTB16!0.58!2.78!ZBTB16;;chr13:37494275..37494304,-!p2@SMAD9!0.58!2.78!SMAD9;;chr2:46524897..46524911,+!p2@EPAS1!0.57!8.99!EPAS1;;chr17:46622205..46622218,-!p3@HOXB2!0.57!3.27!HOXB2;;chr1:158979792..158979814,+!p2@IFI16!0.56!31.55!IFI16;;chr19:49865646..49865718,-!p1@TEAD2!0.56!28.28!TEAD2;;chr5:176738887..176738934,-!p1@MXD3!0.56!21.41!MXD3;;chr1:158979872..158979898,+!p3@IFI16!0.56!9.64!IFI16;;chr1:158969752..158969780,+!p6@IFI16!0.56!5.07!IFI16;;chr12:66218420..66218439,+!p12@HMGA2!0.56!2.62!HMGA2;;chr3:141087562..141087594,+!p12@ZBTB38!0.56!2.62!ZBTB38;;chr15:96873984..96873999,+!p3@NR2F2!0.55!23.21!NR2F2;;chr2:166326200..166326216,+!p1@CSRNP3!0.55!4.09!CSRNP3;;chr15:37392576..37392589,-!p12@MEIS2!0.55!3.27!MEIS2;;chr14:62162224..62162254,+!p1@HIF1A!0.54!459.33!HIF1A;;chr2:239756671..239756732,+!p1@TWIST2!0.54!9.48!TWIST2;;chr9:14314522..14314556,-!p3@NFIB!0.54!6.70!NFIB;;chr2:85981222..85981259,+!p2@ATOH8!0.54!4.58!ATOH8;;chr17:6926362..6926377,+!p1@BCL6B!0.54!2.45!BCL6B;;chr1:170632250..170632277,+!p7@PRRX1!0.54!2.45!PRRX1;;chr1:40105299..40105326,-!p1@HEYL!0.54!2.45!HEYL;;chr12:66218923..66218934,+!p14@HMGA2!0.54!2.45!HMGA2;;chr2:121493425..121493474,+!p1@GLI2!0.53!6.21!GLI2;;chr7:100076723..100076737,-!p3@TSC22D4!0.53!4.25!TSC22D4;;chr1:8926441..8926473,-!p10@ENO1!0.53!3.92!ENO1;;chr7:149470540..149470596,-!p2@ZNF467!0.53!3.43!ZNF467;;chr6:126112074..126112144,+!p1@NCOA7!0.52!39.88!NCOA7;;chr12:2986206..2986258,-!p2@FOXM1!0.52!17.65!FOXM1;;chr17:41623692..41623715,-!p1@ETV4!0.52!12.42!ETV4;;chr9:14083467..14083483,-!p4@NFIB!0.52!6.87!NFIB;;chr3:170076314..170076334,+!p2@SKIL!0.52!3.27!SKIL;;chr12:66218469..66218477,+!p16@HMGA2!0.52!2.29!HMGA2;;chr6:144329384..144329405,-!p1@PLAGL1!0.51!33.67!PLAGL1;;chr12:115121962..115121987,-!p1@TBX3!0.51!24.52!TBX3;;chr12:3068544..3068597,+!p1@TEAD4!0.51!17.16!TEAD4;;chr5:92918894..92918912,+!p2@NR2F1!0.51!9.15!NR2F1;;chr15:37390374..37390422,-!p9@MEIS2!0.51!2.94!MEIS2;;chr16:86544113..86544145,+!p1@FOXF1!0.51!2.94!FOXF1;;chr1:8483878..8483907,-!p4@RERE!0.50!10.63!RERE;;chr1:8934931..8934947,-!p4@ENO1!0.50!8.99!ENO1;;chr12:104531823..104531849,-!p5@NFYB!0.50!5.39!NFYB;;chr7:44143978..44143989,+!p2@AEBP1!0.50!4.58!AEBP1;;chr6:31126291..31126399,+!p1@TCF19!0.49!26.15!TCF19;;chr3:168865194..168865245,-!p3@MECOM!0.49!2.94!MECOM;;chr12:66218443..66218461,+!p8@HMGA2!0.49!2.94!HMGA2;;chr1:23696448..23696453,-!p5@ZNF436!0.49!2.78!ZNF436;;chr20:30433396..30433414,-!p1@FOXS1!0.49!2.13!FOXS1;;chr11:128563652..128563689,+!p3@FLI1!0.49!2.13!FLI1;;chr8:11561453..11561466,+!p2@GATA4!0.49!2.13!GATA4;;chr5:321810..321877,+!p1@AHRR!0.48!8.17!AHRR;;chr15:37390850..37390909,-!p3@MEIS2!0.48!4.74!MEIS2;;chr15:57211660..57211687,+!p6@TCF12!0.48!3.76!TCF12;;chr15:67418047..67418093,+!p4@SMAD3!0.48!2.78!SMAD3;;chr5:92918956..92918969,+!p4@NR2F1!0.48!2.29!NR2F1;;chr7:14029283..14029311,-!p1@ETV1!0.47!13.89!ETV1;;chr4:10458982..10459007,-!p2@ZNF518B!0.47!8.17!ZNF518B;;chr1:114302066..114302080,-!p2@PHTF1!0.47!4.09!PHTF1;;chr9:14082760..14082775,-!p6@NFIB!0.47!3.76!NFIB;;chr18:53254566..53254567,-!p8@TCF4!0.47!3.76!TCF4;;chr17:41623009..41623053,-!p4@ETV4!0.47!3.60!ETV4;;chr12:66218573..66218596,+!p7@HMGA2!0.47!3.27!HMGA2;;chr9:16870659..16870675,-!p2@BNC2!0.47!2.62!BNC2;;chr9:14307229..14307286,-!p10@NFIB!0.47!2.29!NFIB;;chr18:19749353..19749367,+!p4@GATA6!0.47!1.96!GATA6;;chr12:104531945..104531996,-!p1@NFYB!0.46!36.13!NFYB;;chr8:116680215..116680245,-!p6@TRPS1!0.46!3.43!TRPS1;;chr2:46602879..46602899,+!p8@EPAS1!0.46!2.45!EPAS1;;chr3:178789522..178789564,-!p2@ZMAT3!0.45!18.31!ZMAT3;;chr13:72441315..72441454,-!p1@DACH1!0.45!4.41!DACH1;;chr1:164528911..164528940,+!p7@PBX1!0.45!3.11!PBX1;;chr17:41622925..41622976,-!p3@ETV4!0.45!3.11!ETV4;;chr3:25469724..25469773,+!p1@RARB!0.45!2.94!RARB;;chr15:37390482..37390572,-!p7@MEIS2!0.45!2.78!MEIS2;;chr11:32457103..32457123,-!p3@WT1!0.45!1.80!WT1;;chr12:66358080..66358094,+!p15@HMGA2!0.45!1.80!HMGA2;;chr3:25469815..25469866,+!p3@RARB!0.45!1.80!RARB;;chr9:73028814..73028895,-!p1@KLF9!0.44!24.19!KLF9;;chr21:47063625..47063658,+!p1@PCBP3!0.44!10.46!PCBP3;;chr18:53257027..53257052,-!p3@TCF4!0.44!9.48!TCF4;;chr5:124082322..124082364,-!p1@ZNF608!0.44!5.72!ZNF608;;chr9:14314106..14314119,-!p5@NFIB!0.44!3.76!NFIB;;chr15:83953397..83953425,-!p1@BNC1!0.44!2.13!BNC1;;chr13:41240717..41240735,-!p2@FOXO1!0.43!16.02!FOXO1;;chr2:66662281..66662308,+!p1@MEIS1!0.43!7.85!MEIS1;;chr15:37393449..37393528,-!p4@MEIS2!0.43!6.05!MEIS2;;chr3:12329358..12329393,+!p3@PPARG!0.43!5.39!PPARG;;chr11:47279504..47279563,+!p1@NR1H3!0.43!4.90!NR1H3;;chr16:8962202..8962222,-!p3@CARHSP1!0.43!3.60!CARHSP1;;chr15:96876966..96877017,+!p12@NR2F2!0.43!2.78!NR2F2;;chr9:14313893..14313908,-!p7@NFIB!0.43!2.78!NFIB;;chr8:116681108..116681120,-!p9@TRPS1!0.43!2.29!TRPS1;;chr15:67418119..67418162,+!p5@SMAD3!0.43!1.96!SMAD3;;ch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!0.13!2.45!RERE;;chr11:65430554..65430579,-!p3@RELA!0.13!2.29!RELA;;chr22:50247528..50247568,+!p2@ZBED4!0.13!2.13!ZBED4;;chr2:46524474..46524491,+!p4@EPAS1!0.13!2.13!EPAS1;;chr19:56152332..56152347,+!p4@ZNF580!0.13!1.96!ZNF580;;chr10:63809134..63809145,+!p6@ARID5B!0.13!1.96!ARID5B;;chr1:6845489..6845494,+!p4@CAMTA1!0.13!1.31!CAMTA1;;chr1:8924055..8924074,-!p9@ENO1!0.13!1.31!ENO1;;chr19:37407172..37407217,-!p2@ZNF829!0.13!1.31!ZNF829;;chr15:100106670..100106697,+!p4@MEF2A!0.13!1.14!MEF2A;;chr19:44331461..44331482,+!p3@ZNF283!0.13!1.14!ZNF283;;chr19:44598560..44598576,+!p3@ZNF224!0.13!1.14!ZNF224;;chr1:8483849..8483868,-!p14@RERE!0.13!1.14!RERE;;chr11:3400442..3400453,-!p2@ZNF195!0.13!1.14!ZNF195;;chr12:11802909..11802920,+!p7@ETV6!0.13!0.82!ETV6;;chr1:33004996..33005017,+!p3@ZBTB8A!0.13!0.82!ZBTB8A;;chr15:42783258..42783270,-!p4@ZFP106!0.13!0.82!ZFP106;;chr17:65821795..65821826,+!p3@BPTF!0.13!0.82!BPTF;;chr19:12444491..12444517,-!p4@ZNF563!0.13!0.82!ZNF563;;chr18:45457558..45457570,-!p9@SMAD2!0.13!0.65!SMAD2;;chr19:14117148..14117157,-!p2@RFX1!0.13!0.65!RFX1;;chr3:126076242..126076257,-!p1@KLF15!0.13!0.65!KLF15;;chr14:105927191..105927216,+!p6@MTA1!0.13!0.65!MTA1;;chr13:74708246..74708264,-!p8@KLF12!0.13!0.49!KLF12;;chr18:52989001..52989030,-!p10@TCF4!0.13!0.49!TCF4;;chr7:14028488..14028516,-!p2@ETV1!0.13!0.49!ETV1;;chr3:21792585..21792625,-!p2@ZNF385D!0.13!0.49!ZNF385D;;chr19:11071685..11071798,+!p1@SMARCA4!0.12!33.18!SMARCA4;;chr21:30671235..30671253,+!p1@BACH1!0.12!14.55!BACH1;;chr19:19496728..19496813,+!p2@GATAD2A!0.12!13.73!GATAD2A;;chr7:129251531..129251601,+!p1@NRF1!0.12!12.42!NRF1;;chr7:77428149..77428220,+!p1@PHTF2!0.12!11.28!PHTF2;;chr18:32870148..32870223,-!p1@ZSCAN30!0.12!7.68!ZSCAN30;;chr12:498695..498748,-!p2@KDM5A!0.12!7.03!KDM5A;;chr11:123612319..123612395,-!p1@ZNF202!0.12!6.05!ZNF202;;chr19:57988878..57988941,-!p1@ZNF772!0.12!5.88!ZNF772;;chr15:57025759..57025811,-!p2@ZNF280D!0.12!5.39!ZNF280D;;chr8:146176199..146176272,-!p1@ZNF16!0.12!4.90!ZNF16;;chr16:71496112..71496160,-!p1@ZNF23!0.12!4.74!ZNF23;;chr18:22932080..22932170,-!p1@ZNF521!0.12!4.25!ZNF521;;chr19:12146483..12146546,-!p1@ZNF433!0.12!3.60!ZNF433;;chr9:128509663..128509715,+!p1@PBX3!0.12!3.27!PBX3;;chr4:1873011..1873063,+!p2@WHSC1!0.12!3.27!WHSC1;;chrX:134478706..134478736,+!p1@ZNF449!0.12!3.11!ZNF449;;chr19:52391147..52391218,-!p1@ZNF577!0.12!2.94!ZNF577;;chr19:44860820..44860843,-!p1@ZFP112,p1@ZNF285!0.12!2.45!ZFP112;;chr19:8942962..8942987,-!p1@ZNF558!0.12!2.45!ZNF558;;chr1:153939955..153940009,+!p2@CREB3L4!0.12!1.96!CREB3L4;;chr19:57106624..57106644,+!p2@ZNF71!0.12!1.80!ZNF71;;chr20:48807091..48807123,+!p7@CEBPB!0.12!1.80!CEBPB;;chr2:97202451..97202462,+!p2@ARID5A!0.12!1.80!ARID5A;;chr12:53848505..53848532,+!p4@PCBP2!0.12!1.80!PCBP2;;chr1:42501569..42501614,-!p1@HIVEP3!0.12!1.63!HIVEP3;;chr20:25677399..25677433,-!p3@ZNF337!0.12!1.47!ZNF337;;chr19:36909484..36909525,-!p2@ZFP82!0.12!1.47!ZFP82;;chr2:242576946..242576996,-!p4@THAP4!0.12!1.47!THAP4;;chr5:150284420..150284443,-!p2@ZNF300!0.12!1.47!ZNF300;;chr1:249132608..249132628,+!p5@ZNF672!0.12!1.31!ZNF672;;chr1:205592857..205592880,-!p6@ELK4!0.12!1.14!ELK4;;
 +
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000057;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002494;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002548;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000948;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0007100
 +
|ffid_belonging_in_development=CL:0000134
 
|fonse_cell_line=
 
|fonse_cell_line=
 
|fonse_cell_line_closure=
 
|fonse_cell_line_closure=
Line 66: Line 41:
 
|fonse_treatment=
 
|fonse_treatment=
 
|fonse_treatment_closure=
 
|fonse_treatment_closure=
|top_motifs=NKX2-2,8:1.10417249385;RXR{A,B,G}:1.06290978741;TLX1..3_NFIC{dimer}:1.03389285098;EVI1:1.03268474818;IKZF1:0.900095378962;FOX{I1,J2}:0.855693901681;GFI1:0.805377583584;AR:0.801499637301;UFEwm:0.792867560999;NKX3-1:0.791204528897;NR3C1:0.778670608916;TFAP4:0.765231381873;RXRA_VDR{dimer}:0.763397724305;POU3F1..4:0.716132809822;TFDP1:0.703140570838;POU1F1:0.692782918687;HOX{A5,B5}:0.677714686101;E2F1..5:0.674243070852;XCPE1{core}:0.661302793161;TOPORS:0.644142614052;ALX1:0.643540762777;CDC5L:0.621578713422;SMAD1..7,9:0.597268213646;SOX{8,9,10}:0.581499677339;MYB:0.577598690247;TEF:0.570008969874;TEAD1:0.546222160931;HSF1,2:0.531994678277;PAX5:0.525112529482;AIRE:0.507889593524;PBX1:0.503373845834;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.502097904583;XBP1:0.495304487014;ZNF238:0.479520313539;EN1,2:0.477584744905;GFI1B:0.466158323013;ALX4:0.458713121245;NFY{A,B,C}:0.447279239631;NFATC1..3:0.438325667997;STAT1,3:0.426861889511;SOX17:0.422920534327;LHX3,4:0.387414320336;ZNF143:0.386232264195;GTF2A1,2:0.384604971263;MYBL2:0.373629488038;TAL1_TCF{3,4,12}:0.371218162105;ARID5B:0.366266913093;HES1:0.355120477812;STAT5{A,B}:0.350098700474;MAZ:0.332122356015;NFIX:0.328388683959;EBF1:0.324839120075;GTF2I:0.320379605479;PAX8:0.316831506437;ZBTB16:0.304061464642;GATA4:0.297625295238;ONECUT1,2:0.297427790941;MZF1:0.289556926201;ELK1,4_GABP{A,B1}:0.284691225488;NANOG{mouse}:0.284224214565;EGR1..3:0.276637015201;ELF1,2,4:0.273891146255;TP53:0.271388839475;MTE{core}:0.263015297121;PITX1..3:0.253858403742;PAX4:0.244988361555;ZIC1..3:0.238696300359;RBPJ:0.238520090394;LEF1_TCF7_TCF7L1,2:0.229008634427;SOX2:0.227240599913;FOXP1:0.224835033948;HIC1:0.222125783322;HAND1,2:0.217198471316;PRDM1:0.214490681621;NFE2L2:0.205052190751;CRX:0.191707311811;KLF4:0.178339085832;PAX1,9:0.167819679459;GCM1,2:0.16010504993;STAT2,4,6:0.158595529777;GZF1:0.158376842597;TBX4,5:0.151766772571;GLI1..3:0.151298612947;PATZ1:0.143054093279;ADNP_IRX_SIX_ZHX:0.130893787726;HBP1_HMGB_SSRP1_UBTF:0.120158890305;YY1:0.116605370217;ZFP161:0.103132699184;NRF1:0.0806695148438;SPZ1:0.0803392703404;ZNF148:0.0721327110109;SP1:0.0625870600991;HMGA1,2:0.0591243457229;PAX3,7:0.0430209401416;BACH2:0.0376917066639;AHR_ARNT_ARNT2:0.0323140660345;GATA6:0.0145928597711;FOXD3:0.0117682985247;NKX6-1,2:0.0109087446039;SRF:0.0091954524829;HNF4A_NR2F1,2:-0.00104454928796;TFAP2{A,C}:-0.00225686961112;ETS1,2:-0.00643471933773;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.00836629114239;REST:-0.0138410582057;NFE2L1:-0.0144773604384;CDX1,2,4:-0.0160450734555;HOX{A4,D4}:-0.0197073367386;DBP:-0.0207563755665;T:-0.0396896034182;HOXA9_MEIS1:-0.0474509123564;HNF1A:-0.0495824921718;FOS_FOS{B,L1}_JUN{B,D}:-0.0605534041631;TBP:-0.0707977151126;NR5A1,2:-0.0886390517392;ATF6:-0.0902020798223;bHLH_family:-0.0942860621887;NR1H4:-0.0956705870457;TFAP2B:-0.0967478133037;NKX2-1,4:-0.106865426918;NFE2:-0.119707632759;MED-1{core}:-0.124706582553;NHLH1,2:-0.135269183785;HLF:-0.152462210826;ZNF384:-0.153580892681;ZBTB6:-0.155116543912;SPI1:-0.176153236556;CREB1:-0.194732796565;MAFB:-0.211236933241;FOX{F1,F2,J1}:-0.213501795502;PRRX1,2:-0.226508737478;FOSL2:-0.236130277666;SPIB:-0.243708650006;BPTF:-0.252824677436;NR6A1:-0.253228609878;TFCP2:-0.255870474262;FOXP3:-0.256138506647;FOXQ1:-0.256206218145;NKX3-2:-0.289506526753;EP300:-0.300323541918;MYFfamily:-0.310211432962;SOX5:-0.327896393632;OCT4_SOX2{dimer}:-0.337785093418;PDX1:-0.348300208708;HMX1:-0.359866498588;IKZF2:-0.364123262694;MTF1:-0.371243920817;TLX2:-0.375472412289;IRF7:-0.37602917884;NFKB1_REL_RELA:-0.38443594775;RFX1:-0.390244610721;MEF2{A,B,C,D}:-0.393017784214;ESRRA:-0.39728578485;FOXA2:-0.39916035969;NANOG:-0.399861754542;POU2F1..3:-0.402378677814;PPARG:-0.409488579333;POU5F1:-0.421883059437;BREu{core}:-0.426471184581;CEBPA,B_DDIT3:-0.43765428536;TGIF1:-0.450138008336;CUX2:-0.458429178748;ZNF423:-0.464217428453;SREBF1,2:-0.465808619012;ATF4:-0.498056817446;JUN:-0.509413438339;ESR1:-0.520428686403;DMAP1_NCOR{1,2}_SMARC:-0.522805449047;HIF1A:-0.525096668084;FOXM1:-0.53734640333;PAX2:-0.550728552935;PAX6:-0.569547083714;FOXO1,3,4:-0.575276232304;FOX{D1,D2}:-0.580948793412;RUNX1..3:-0.608032795318;FOXL1:-0.618088260309;POU6F1:-0.620256285951;IRF1,2:-0.641289800377;LMO2:-0.700763273784;ATF2:-0.735387476804;RORA:-0.756214926613;RREB1:-0.761504188806;ATF5_CREB3:-0.809600445887;NFIL3:-0.809791091951;VSX1,2:-0.814936758164;SNAI1..3:-0.855587927495;NKX2-3_NKX2-5:-0.937476821842;RFX2..5_RFXANK_RFXAP:-0.941183221562;ZEB1:-0.960605914737;MYOD1:-1.00465335646;FOXN1:-1.00507330259;HOX{A6,A7,B6,B7}:-1.88772106497
 
|comment=
 
|created_by=tmeehan
 
|creation_date=2011-06-15T12:34:29Z
 
|def="A fibroblast from cardiac tissue." [GOC:tfm]
 
 
|has_quality=
 
|has_quality=
|is_a=EFO:0002091;;FF:0000002;;FF:0000059;;FF:0000210
+
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Cardiac%252c%2520donor6.CNhs12061.11460-119B2.hg19.nobarcode.bam
 +
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Cardiac%252c%2520donor6.CNhs12061.11460-119B2.hg19.ctss.bed.gz
 +
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Cardiac%252c%2520donor6.CNhs12061.11460-119B2.hg19.nobarcode.rdna.fa.gz
 +
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Cardiac%252c%2520donor6.CNhs12061.11460-119B2.hg38.nobarcode.bam
 +
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Cardiac%252c%2520donor6.CNhs12061.11460-119B2.hg38.nobarcode.ctss.bed.gz
 +
|id=FF:11460-119B2
 +
|is_a=EFO:0002091;;FF:0000059
 +
|is_obsolete=
 +
|library_id=CNhs12061
 +
|library_id_phase_based=2:CNhs12061
 +
|microRNAs=
 +
|microRNAs_nn=
 +
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11460
 +
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11460
 +
|name=Fibroblast - Cardiac, donor6
 
|namespace=FANTOM5
 
|namespace=FANTOM5
 
|part_of=
 
|part_of=
 +
|profile_cagescan=,,,
 +
|profile_hcage=CNhs12061,LSID838,release011,COMPLETED
 +
|profile_rnaseq=
 +
|profile_srnaseq=,,,
 +
|refex=http://refex.dbcls.jp/genelist.php?lang
 +
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.0129806475610779,0,-0.211609965059362,0.00627640118455995,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143511350433242,0,0,0.0328760835670761,0,0,0.198876464513612,0,0,0.198315450968769,0,0,0,0,0,0,0,0,0,0,0.0657521671341522,0,0.0505504634369643,0,0,0,0.0657521671341522,0,0,0,0,-0.0242150211128343,0,0,0,0.173298677647464,0,0.00531476318255242,0.0657521671341522,-0.0969923612426051,0,0,0.0255023585863507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657521671341522,0,0,0,0,0,0,0,0,0,0,0.0724540697535252,0.109247745317055,0,0,0.060474245454452,0.0472993177897943,0,0.122845985799448,0.0328760835670761,0,0.0752633264097576,0.0431120249069599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.00972425509872895,0,0,0,-0.0727088341078527,-0.348942533078003,0,0,0,0,0,0
 +
|repeat_enrich_byname=0,0,0,0,0.0752633264097576,0,0,0,0,0,0.21849549063411,0,0,0.122845985799448,0,0,-0.0738801976381004,0,0.259389626662393,-0.0777629753893197,0.061422992899724,0,-0.0506809076541147,0,0,0,0,0,0,0,0,0,0.0903756236815454,0,0.0724334342101327,0,0,0,0,0.143787278964009,-0.239720063764255,0,-0.00862204077569415,-0.0683442610773682,0,0,0,0,-0.183591330510592,0,-0.0551273166595885,-0.0827201683234173,0.21849549063411,-0.143544748993684,-0.055712496781182,0,0,0,0.19906794542233,0.344618922104305,0,0,-0.121779851751874,-0.0157135981868435,0,0,0.731487241087579,0,0.271646898623709,0.183184479752679,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308233475244047,0.00428344406866227,0,0,0,0,-0.311814372771686,0,0,0.43250296736007,0.00621186352178205,-0.0238618549744287,-0.293844807935336,0,0.456552064874899,-0.0344161666546279,0.16007891125427,-0.215677993386088,-0.0245558635716909,0.202918641256107,0.0516971396405413,0.154281907308872,0.191451843021178,-0.0377761580404803,0.0621224599387555,0.0355271876565739,0.435506231132905,-0.161050071610134,0,0,0,0.00599204933207598,0,0,0.0268787264945524,-0.0710001495875255,0.126835325156663,-0.0593950588797253,-0.0479124911510455,0.145056965115402,0.928983816546536,-0.284137775249131,0.0151416202644503,0.603417782938329,0,0,-0.000123149974687764,-0.0420118584407915,-0.123516791756711,-0.0200749326808988,0,-0.12079901039527,0.0545017247220794,0,-0.0941183892467023,0.0997302913658895,0,0,-0.185876870065458,0.0657521671341522,0,0.0312343201122285,0.0520914345877558,0,0.062603123025589,-0.242657782248497,0.0265733390355509,0,-0.0338886899066685,0.0328760835670761,0.0888015587623281,0,-0.0494021934889537,0,0,-0.208529662577061,0,0.0570485436684001,0.171100993163836,0.00830798130846122,0.0945986355795885,-0.0584468268118252,-0.0528993088643853,0.011779435945254,0.060474245454452,0.141461372903815,-0.0457724625852685,0.507624408022493,0.00833346484514463,0.193893926592277,-0.0661028630344421,-0.0144569103122971,0.111116178068566,0.122622653040873,0.0602551710828552,0,-0.109907954467554,0,0.0747409822176985,0.0553174890245403,-0.108017333833055,0.0372905817232427,0,0.0231731840198937,0.947883235589587,0.0081470080465118,0,0.0258493951020098,0,0.270350741284981,0.0612458253722296,-0.178774344297513,0.209061813243613,0,0.123326947645817,0,0,-0.171878293643771,-0.169723870630237,0,-0.246204920279246,-0.0711411167687922,-0.21131568038934,-0.0502189063007819,0,0,-0.198840065725059,0,0.0657521671341522,-0.309093703036361,0.0657521671341522,0.0724540697535252,0.0779456992608755,0,-0.0471998165545318,0,0,-0.177527765965176,0,0.034323614593516,0,0,0.0469530641828459,0.0566705646573312,0,0,0,0.00118448984521297,0,0,0,0,0,0,0,-0.0511919412924078,0.11668468867683,0,-0.0349773924196356,0,0.0657521671341522,0,0,0,0.0193846860888326,0,0.0657521671341522,0.138436863565482,0.0950934969090075,-0.12301741567642,0.061422992899724,0,0,0,0.081110958228195,0.0152589285393863,0.0657521671341522,-0.0661105393634795,0,0,0,0,0.0367049960102363,0,0,0,0.0328760835670761,0.00802171008048817,-0.177937733147555,0,0,0,0.0862240498139198,0,0,0,0.0580595806611315,-0.0536115796399972,0,0,-0.185069901118714,0,-0.164832795750454,0.0412641062526062,0,0.064155706394656,-0.0483102399496302,-0.131861017738175,0,0,0.352048136797195,0,0.0157392832714387,0.249786966190808,-0.0823702229656663,0,0.0140628204889237,0,0,0,0,0,0.0657521671341522,-0.091468526600308,0,0,0,0,0,0,0,0,0,0,0.0657521671341522,-0.0551860196912657,0.0810746209889536,0.0885742324648159,0,0,0,0,0,0,0.403484047465535,-0.089841283147679,0,0,0,0,0,0,0,0,0.262049905751159,0,0,0,0,0,-0.0969923612426051,0,0.0657521671341522,0,0,0.0125528023691199,0,0,-0.211609965059362,0,0,0,0,0,0,0,0.0306131693029619,0,0,0,0,0,-0.123319086035448,-0.407310905660538,0,0.0657521671341522,0,0,0,0,0,0.0883451532096198,0,0,0,0,-0.113884373708977,0,0,0,0.113699105844954,0,0.0129806475610779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181589225707855,0.061422992899724,0,0,0.345905626470084,0,0.0096268448087598,0.0657521671341522,0,0,0.090705815544428,0,0,0,0,0,0,0.00153565953854903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0328760835670761,0.0478798178321402,0,0,0,0,0.0657521671341522,0,0,0.198876464513612,0,0,-0.0591567262334501,0,0,0,0,0.0815925714573776,0,0.0873524599285246,0.303335182187244,0.0350168679382239,0,0,0,0.169044563651378,0.173298677647464,0,0,0.0657521671341522,0.230056973362768,0,0,0,0,0,0,0,0,0.122845985799448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143511350433242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.00113527970834044,0.0657521671341522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0932802093788256,0,0,0,-0.090240243857596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657521671341522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657521671341522,0,0,0,-0.186933376316285,0,0,0,0,0,0,0,0,0.0657521671341522,0,0.0816798848104001,0,0,0.017530091895098,0,0.0384693535694205,0,0,0,0,0,0,0,0,0,0,0,0.0657521671341522,0,0,0,0,-0.103643770248047,0,0,0,0,-0.047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 +
|rna_box=119
 +
|rna_catalog_number=SC6305
 +
|rna_concentration=0.607
 +
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
 +
|rna_lot_number=2151
 +
|rna_od260/230=
 +
|rna_od260/280=
 +
|rna_position=B2
 +
|rna_rin=
 +
|rna_sample_type=total RNA
 +
|rna_tube_id=119B2
 +
|rna_weight_ug=10
 +
|sample_age=fetal
 +
|sample_category=primary cells
 +
|sample_cell_catalog=N/A
 +
|sample_cell_line=
 +
|sample_cell_lot=N/A
 +
|sample_cell_type=fibroblast
 +
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
 +
|sample_company=Sciencell/3H
 +
|sample_description=
 +
|sample_dev_stage=fetus
 +
|sample_disease=
 +
|sample_donor(cell lot)=
 +
|sample_ethnicity=unknown
 +
|sample_experimental_condition=
 +
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.08362281780507e-249!GO:0005737;cytoplasm;7.0077959925302e-199!GO:0043226;organelle;1.92146558956664e-198!GO:0043229;intracellular organelle;4.19894948897846e-198!GO:0043231;intracellular membrane-bound organelle;2.17848163576533e-193!GO:0043227;membrane-bound organelle;4.7381219104713e-193!GO:0044422;organelle part;3.60824659261671e-150!GO:0044446;intracellular organelle part;9.93066185651682e-149!GO:0044444;cytoplasmic part;1.95204554935954e-141!GO:0032991;macromolecular complex;6.48542875334735e-101!GO:0044238;primary metabolic process;5.46972446577296e-93!GO:0044237;cellular metabolic process;1.90620312852537e-91!GO:0030529;ribonucleoprotein complex;1.96674869693151e-89!GO:0043170;macromolecule metabolic process;8.46789127000502e-84!GO:0005515;protein binding;2.16043120128553e-83!GO:0005634;nucleus;1.10329950032794e-74!GO:0043233;organelle lumen;2.30627628820612e-72!GO:0031974;membrane-enclosed lumen;2.30627628820612e-72!GO:0044428;nuclear part;5.49640374506649e-70!GO:0003723;RNA binding;8.65266555148176e-70!GO:0005739;mitochondrion;9.42833893410802e-67!GO:0005840;ribosome;2.40178682823771e-55!GO:0019538;protein metabolic process;7.66445450590426e-54!GO:0031090;organelle membrane;5.5509605545195e-53!GO:0016043;cellular component organization and biogenesis;4.18358517850667e-52!GO:0006412;translation;8.63768564969905e-52!GO:0043234;protein complex;1.64350405827316e-50!GO:0003735;structural constituent of ribosome;2.33818659068832e-49!GO:0044260;cellular macromolecule metabolic process;1.45051843562708e-47!GO:0006396;RNA processing;2.71819823007799e-47!GO:0044267;cellular protein metabolic process;4.52888779014748e-47!GO:0044429;mitochondrial part;9.82776191266431e-46!GO:0009058;biosynthetic process;3.81186149906259e-45!GO:0043283;biopolymer metabolic process;3.55705484169736e-44!GO:0015031;protein transport;1.12255504562147e-43!GO:0033036;macromolecule localization;2.20467588853258e-43!GO:0033279;ribosomal subunit;5.61485012382534e-43!GO:0031967;organelle envelope;6.43059617260009e-43!GO:0031975;envelope;1.6346351816311e-42!GO:0044249;cellular biosynthetic process;2.59558329581071e-41!GO:0031981;nuclear lumen;3.2684024085448e-41!GO:0009059;macromolecule biosynthetic process;4.7057493501539e-41!GO:0005829;cytosol;3.62203182434036e-40!GO:0008104;protein localization;6.65978590428706e-40!GO:0045184;establishment of protein localization;6.6772176420338e-40!GO:0043228;non-membrane-bound organelle;5.84225910102033e-39!GO:0043232;intracellular non-membrane-bound organelle;5.84225910102033e-39!GO:0010467;gene expression;1.8079474340298e-38!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.90924720026284e-38!GO:0016071;mRNA metabolic process;7.97027053831962e-37!GO:0046907;intracellular transport;2.70958970711662e-36!GO:0008380;RNA splicing;2.74342007736597e-35!GO:0006996;organelle organization and biogenesis;6.21874791412554e-35!GO:0065003;macromolecular complex assembly;9.09717280648828e-34!GO:0006397;mRNA processing;1.26580861051589e-31!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.16000980773464e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.54086954285512e-31!GO:0006886;intracellular protein transport;3.62866537524014e-30!GO:0005740;mitochondrial envelope;1.01529767698871e-29!GO:0022607;cellular component assembly;1.674842243041e-29!GO:0006259;DNA metabolic process;5.52278372211682e-29!GO:0007049;cell cycle;3.69951808391802e-28!GO:0031966;mitochondrial membrane;5.66370816524423e-28!GO:0019866;organelle inner membrane;4.83358736990504e-27!GO:0000166;nucleotide binding;2.2434365835567e-25!GO:0005654;nucleoplasm;6.93041343066943e-25!GO:0005743;mitochondrial inner membrane;7.32760790919629e-25!GO:0005681;spliceosome;1.38577831982986e-24!GO:0044445;cytosolic part;1.8630382706788e-24!GO:0006119;oxidative phosphorylation;1.90176200431421e-23!GO:0051649;establishment of cellular localization;1.91635281998582e-23!GO:0051641;cellular localization;2.23362364075781e-23!GO:0012505;endomembrane system;5.42122245215643e-23!GO:0022402;cell cycle process;3.89751958223524e-22!GO:0015935;small ribosomal subunit;4.12258733823702e-22!GO:0015934;large ribosomal subunit;5.86713591301203e-22!GO:0000278;mitotic cell cycle;1.00182534884882e-21!GO:0005783;endoplasmic reticulum;1.53159585192135e-21!GO:0016462;pyrophosphatase activity;2.41241938055337e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.88394423101948e-21!GO:0044455;mitochondrial membrane part;4.35909911734576e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;4.64114978703166e-21!GO:0003676;nucleic acid binding;4.64114978703166e-21!GO:0017111;nucleoside-triphosphatase activity;7.07599571720063e-21!GO:0006457;protein folding;1.40860893528788e-20!GO:0031980;mitochondrial lumen;6.34676001396746e-20!GO:0005759;mitochondrial matrix;6.34676001396746e-20!GO:0044451;nucleoplasm part;9.72256427554101e-20!GO:0022618;protein-RNA complex assembly;1.67524862613655e-18!GO:0005746;mitochondrial respiratory chain;2.08635231578551e-18!GO:0005794;Golgi apparatus;2.2107898271511e-18!GO:0032553;ribonucleotide binding;2.79097090325253e-18!GO:0032555;purine ribonucleotide binding;2.79097090325253e-18!GO:0017076;purine nucleotide binding;5.37331090593492e-18!GO:0048770;pigment granule;7.30989944204468e-18!GO:0042470;melanosome;7.30989944204468e-18!GO:0044432;endoplasmic reticulum part;1.83465764632157e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.49956570744385e-17!GO:0005730;nucleolus;4.84450806516747e-17!GO:0006974;response to DNA damage stimulus;8.09295466466207e-17!GO:0000087;M phase of mitotic cell cycle;1.45662562210889e-16!GO:0005694;chromosome;2.32945018050605e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.35892354777788e-16!GO:0007067;mitosis;2.71015753176599e-16!GO:0050136;NADH dehydrogenase (quinone) activity;2.71015753176599e-16!GO:0003954;NADH dehydrogenase activity;2.71015753176599e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.71015753176599e-16!GO:0016874;ligase activity;2.72045654455452e-16!GO:0000502;proteasome complex (sensu Eukaryota);2.79752982827816e-16!GO:0051186;cofactor metabolic process;5.50149331285989e-16!GO:0022403;cell cycle phase;8.87929233758595e-16!GO:0005761;mitochondrial ribosome;8.92242556933404e-16!GO:0000313;organellar ribosome;8.92242556933404e-16!GO:0044265;cellular macromolecule catabolic process;1.03930098530248e-15!GO:0051301;cell division;1.25468663984182e-15!GO:0006605;protein targeting;1.78765168496987e-15!GO:0006512;ubiquitin cycle;1.9515606907979e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;2.25108342888089e-15!GO:0043285;biopolymer catabolic process;3.12444587286936e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.82898593861279e-15!GO:0019941;modification-dependent protein catabolic process;4.0398659408346e-15!GO:0043632;modification-dependent macromolecule catabolic process;4.0398659408346e-15!GO:0016070;RNA metabolic process;4.10448206683235e-15!GO:0005524;ATP binding;4.16420973282792e-15!GO:0008134;transcription factor binding;4.74653072330618e-15!GO:0008135;translation factor activity, nucleic acid binding;4.80110577175394e-15!GO:0006511;ubiquitin-dependent protein catabolic process;5.6181355553944e-15!GO:0044257;cellular protein catabolic process;6.0314600686876e-15!GO:0044427;chromosomal part;6.10927998522203e-15!GO:0032559;adenyl ribonucleotide binding;6.9761189061713e-15!GO:0042775;organelle ATP synthesis coupled electron transport;1.56194629941364e-14!GO:0042773;ATP synthesis coupled electron transport;1.56194629941364e-14!GO:0030554;adenyl nucleotide binding;1.87247818956297e-14!GO:0030964;NADH dehydrogenase complex (quinone);2.12817918189037e-14!GO:0045271;respiratory chain complex I;2.12817918189037e-14!GO:0005747;mitochondrial respiratory chain complex I;2.12817918189037e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.60519686530626e-14!GO:0048193;Golgi vesicle transport;2.92637088928321e-14!GO:0009057;macromolecule catabolic process;3.53688538513716e-14!GO:0006281;DNA repair;5.45053471638211e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.38295143681331e-14!GO:0005635;nuclear envelope;9.53036785435087e-14!GO:0030163;protein catabolic process;9.62453364419513e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;9.8230751880085e-14!GO:0000375;RNA splicing, via transesterification reactions;9.8230751880085e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.8230751880085e-14!GO:0016192;vesicle-mediated transport;1.13320199932152e-13!GO:0043412;biopolymer modification;1.48014018520112e-13!GO:0042254;ribosome biogenesis and assembly;1.7649433503946e-13!GO:0044248;cellular catabolic process;1.81479793472928e-13!GO:0051082;unfolded protein binding;2.21922333207842e-13!GO:0000279;M phase;8.1754283547855e-13!GO:0031965;nuclear membrane;1.15516205382766e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.27675641817145e-12!GO:0051276;chromosome organization and biogenesis;1.6500211192849e-12!GO:0051726;regulation of cell cycle;1.6500211192849e-12!GO:0003743;translation initiation factor activity;1.76718487230595e-12!GO:0000074;regulation of progression through cell cycle;1.90818893720739e-12!GO:0006260;DNA replication;2.65327208997241e-12!GO:0044453;nuclear membrane part;3.27462352010752e-12!GO:0006732;coenzyme metabolic process;3.37294114206295e-12!GO:0009719;response to endogenous stimulus;3.69971788849298e-12!GO:0005789;endoplasmic reticulum membrane;4.03694096943408e-12!GO:0006464;protein modification process;4.04430248173824e-12!GO:0005793;ER-Golgi intermediate compartment;6.87279074134078e-12!GO:0006413;translational initiation;8.10314158300541e-12!GO:0009055;electron carrier activity;1.58254196310611e-11!GO:0016604;nuclear body;3.68383272945971e-11!GO:0006913;nucleocytoplasmic transport;5.30953380724268e-11!GO:0016887;ATPase activity;5.61859844889967e-11!GO:0009259;ribonucleotide metabolic process;6.66305656323986e-11!GO:0042623;ATPase activity, coupled;1.20185493354711e-10!GO:0051169;nuclear transport;1.29679303156767e-10!GO:0006163;purine nucleotide metabolic process;1.48534374841226e-10!GO:0008565;protein transporter activity;3.33827882762046e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;3.7767049497745e-10!GO:0009150;purine ribonucleotide metabolic process;3.90002180693247e-10!GO:0043687;post-translational protein modification;4.50087981178398e-10!GO:0006461;protein complex assembly;4.50087981178398e-10!GO:0006446;regulation of translational initiation;5.61276109526836e-10!GO:0012501;programmed cell death;5.79653254122038e-10!GO:0004386;helicase activity;6.08117454351497e-10!GO:0003712;transcription cofactor activity;7.66305783073988e-10!GO:0006399;tRNA metabolic process;8.18961067912271e-10!GO:0006164;purine nucleotide biosynthetic process;1.05371864582315e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.1712728666676e-09!GO:0006323;DNA packaging;1.1771451042787e-09!GO:0006915;apoptosis;1.17783667646572e-09!GO:0015630;microtubule cytoskeleton;1.22469407838031e-09!GO:0005643;nuclear pore;1.43347506805702e-09!GO:0009260;ribonucleotide biosynthetic process;1.47050305882773e-09!GO:0048523;negative regulation of cellular process;1.50337809429704e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.69183433044105e-09!GO:0009199;ribonucleoside triphosphate metabolic process;2.43225551026936e-09!GO:0009152;purine ribonucleotide biosynthetic process;2.6127726487562e-09!GO:0009141;nucleoside triphosphate metabolic process;3.55042128812388e-09!GO:0000785;chromatin;3.64987101080575e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.96705046061214e-09!GO:0008639;small protein conjugating enzyme activity;4.64933438240352e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.67037349620045e-09!GO:0009144;purine nucleoside triphosphate metabolic process;4.67037349620045e-09!GO:0065004;protein-DNA complex assembly;4.97071848809326e-09!GO:0046930;pore complex;5.37088699890012e-09!GO:0008219;cell death;5.83006977001639e-09!GO:0016265;death;5.83006977001639e-09!GO:0065002;intracellular protein transport across a membrane;6.42640449285826e-09!GO:0009060;aerobic respiration;7.85646577271524e-09!GO:0050794;regulation of cellular process;8.41743397106431e-09!GO:0004842;ubiquitin-protein ligase activity;8.93376843539479e-09!GO:0006364;rRNA processing;9.42590930898774e-09!GO:0008026;ATP-dependent helicase activity;9.55005041812949e-09!GO:0030532;small nuclear ribonucleoprotein complex;1.23482648883348e-08!GO:0006333;chromatin assembly or disassembly;1.24934403517213e-08!GO:0016607;nuclear speck;1.43013143967411e-08!GO:0006366;transcription from RNA polymerase II promoter;1.47296164475945e-08!GO:0019787;small conjugating protein ligase activity;1.94066122454476e-08!GO:0006403;RNA localization;2.10374438380217e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.10374438380217e-08!GO:0017038;protein import;2.15001522563977e-08!GO:0050657;nucleic acid transport;2.32643426269402e-08!GO:0051236;establishment of RNA localization;2.32643426269402e-08!GO:0050658;RNA transport;2.32643426269402e-08!GO:0015986;ATP synthesis coupled proton transport;2.32643426269402e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.32643426269402e-08!GO:0009056;catabolic process;2.71197885759696e-08!GO:0016072;rRNA metabolic process;2.71197885759696e-08!GO:0051188;cofactor biosynthetic process;2.71704473326922e-08!GO:0009142;nucleoside triphosphate biosynthetic process;2.76081566813055e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.76081566813055e-08!GO:0045333;cellular respiration;2.91327277747676e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.97361497224359e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.46110168893577e-08!GO:0004812;aminoacyl-tRNA ligase activity;3.46110168893577e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.46110168893577e-08!GO:0009117;nucleotide metabolic process;3.46220085644302e-08!GO:0046034;ATP metabolic process;3.68046645440228e-08!GO:0051246;regulation of protein metabolic process;5.16394350176032e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.29430128851343e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.29430128851343e-08!GO:0003924;GTPase activity;5.96887507997495e-08!GO:0043038;amino acid activation;6.94163717754971e-08!GO:0006418;tRNA aminoacylation for protein translation;6.94163717754971e-08!GO:0043039;tRNA aminoacylation;6.94163717754971e-08!GO:0048519;negative regulation of biological process;7.56083597432085e-08!GO:0005788;endoplasmic reticulum lumen;7.72133010065458e-08!GO:0044431;Golgi apparatus part;8.92950215709068e-08!GO:0016881;acid-amino acid ligase activity;1.41761725379451e-07!GO:0006334;nucleosome assembly;1.9201787200016e-07!GO:0006099;tricarboxylic acid cycle;1.93062308979201e-07!GO:0046356;acetyl-CoA catabolic process;1.93062308979201e-07!GO:0016740;transferase activity;3.09807673234062e-07!GO:0005819;spindle;3.19781812241291e-07!GO:0003697;single-stranded DNA binding;3.51945783169614e-07!GO:0019829;cation-transporting ATPase activity;3.76919329137223e-07!GO:0006754;ATP biosynthetic process;4.10612779707787e-07!GO:0006753;nucleoside phosphate metabolic process;4.10612779707787e-07!GO:0016491;oxidoreductase activity;4.26070895124494e-07!GO:0006793;phosphorus metabolic process;4.46902895954683e-07!GO:0006796;phosphate metabolic process;4.46902895954683e-07!GO:0005813;centrosome;5.45837973584626e-07!GO:0051187;cofactor catabolic process;5.92013237248211e-07!GO:0006084;acetyl-CoA metabolic process;5.95521290668609e-07!GO:0030120;vesicle coat;5.97896715549519e-07!GO:0030662;coated vesicle membrane;5.97896715549519e-07!GO:0005768;endosome;6.18197549512138e-07!GO:0048475;coated membrane;7.33777734921852e-07!GO:0030117;membrane coat;7.33777734921852e-07!GO:0051028;mRNA transport;7.33777734921852e-07!GO:0009109;coenzyme catabolic process;7.81462709784605e-07!GO:0043566;structure-specific DNA binding;8.05452059065945e-07!GO:0031497;chromatin assembly;1.01563388434759e-06!GO:0016310;phosphorylation;1.15878430075491e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.36619456126099e-06!GO:0016779;nucleotidyltransferase activity;1.47667238563092e-06!GO:0045259;proton-transporting ATP synthase complex;1.48497017865497e-06!GO:0005815;microtubule organizing center;1.50272625725251e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.53780248508543e-06!GO:0016853;isomerase activity;1.68539820279e-06!GO:0000245;spliceosome assembly;1.76803205394693e-06!GO:0009108;coenzyme biosynthetic process;1.9169257654394e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.05328491133228e-06!GO:0008654;phospholipid biosynthetic process;2.0774233294214e-06!GO:0045786;negative regulation of progression through cell cycle;2.28616485753309e-06!GO:0000775;chromosome, pericentric region;2.29126404687368e-06!GO:0005762;mitochondrial large ribosomal subunit;2.83472296105136e-06!GO:0000315;organellar large ribosomal subunit;2.83472296105136e-06!GO:0005839;proteasome core complex (sensu Eukaryota);3.00079091253357e-06!GO:0051170;nuclear import;3.08958356017444e-06!GO:0051329;interphase of mitotic cell cycle;3.55326080503757e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.66967341699305e-06!GO:0005525;GTP binding;3.8756781065534e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;4.02358357658381e-06!GO:0007010;cytoskeleton organization and biogenesis;4.23323477210463e-06!GO:0050789;regulation of biological process;4.30206930939788e-06!GO:0007005;mitochondrion organization and biogenesis;4.93870759756324e-06!GO:0006752;group transfer coenzyme metabolic process;5.02677547811697e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;5.2479488984221e-06!GO:0016787;hydrolase activity;5.91050919922041e-06!GO:0005667;transcription factor complex;5.96870594873703e-06!GO:0016859;cis-trans isomerase activity;6.21115924241078e-06!GO:0007051;spindle organization and biogenesis;6.50768482022722e-06!GO:0031252;leading edge;6.64788891769137e-06!GO:0006606;protein import into nucleus;7.02650871385752e-06!GO:0051325;interphase;7.28122877519583e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;7.53995527281248e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;8.29574581168159e-06!GO:0000139;Golgi membrane;8.53284180115548e-06!GO:0032446;protein modification by small protein conjugation;8.99086446368655e-06!GO:0006613;cotranslational protein targeting to membrane;9.67895248557329e-06!GO:0016023;cytoplasmic membrane-bound vesicle;9.83060202405946e-06!GO:0031988;membrane-bound vesicle;9.98364959810242e-06!GO:0005770;late endosome;1.07829577981734e-05!GO:0016567;protein ubiquitination;1.10580512673106e-05!GO:0003724;RNA helicase activity;1.1270197642992e-05!GO:0000151;ubiquitin ligase complex;1.1757075243374e-05!GO:0043067;regulation of programmed cell death;1.32090129052385e-05!GO:0042981;regulation of apoptosis;1.32540414794075e-05!GO:0030036;actin cytoskeleton organization and biogenesis;1.38970985621849e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.42127976432247e-05!GO:0016564;transcription repressor activity;1.47295027861887e-05!GO:0043623;cellular protein complex assembly;1.50751951566954e-05!GO:0004298;threonine endopeptidase activity;1.63554987030994e-05!GO:0043069;negative regulation of programmed cell death;1.68150371651942e-05!GO:0044440;endosomal part;1.90598015724422e-05!GO:0010008;endosome membrane;1.90598015724422e-05!GO:0031324;negative regulation of cellular metabolic process;1.94202855572695e-05!GO:0006261;DNA-dependent DNA replication;2.23418975956116e-05!GO:0006916;anti-apoptosis;2.29904374952744e-05!GO:0003714;transcription corepressor activity;2.56176233348896e-05!GO:0032561;guanyl ribonucleotide binding;2.76840720651062e-05!GO:0019001;guanyl nucleotide binding;2.76840720651062e-05!GO:0043066;negative regulation of apoptosis;3.01212183298244e-05!GO:0030867;rough endoplasmic reticulum membrane;3.07358217924667e-05!GO:0005798;Golgi-associated vesicle;3.22392315905454e-05!GO:0006091;generation of precursor metabolites and energy;3.24942215477937e-05!GO:0009165;nucleotide biosynthetic process;3.44406772486893e-05!GO:0019843;rRNA binding;3.51958977094763e-05!GO:0016568;chromatin modification;3.66491685565144e-05!GO:0031982;vesicle;3.67026013063952e-05!GO:0031410;cytoplasmic vesicle;4.22883387384052e-05!GO:0045454;cell redox homeostasis;4.68312284495538e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.83849721373188e-05!GO:0000314;organellar small ribosomal subunit;4.84431359052623e-05!GO:0005763;mitochondrial small ribosomal subunit;4.84431359052623e-05!GO:0031968;organelle outer membrane;5.22788299944844e-05!GO:0019899;enzyme binding;5.76131222729833e-05!GO:0003899;DNA-directed RNA polymerase activity;6.42398003714108e-05!GO:0003713;transcription coactivator activity;6.53410719018347e-05!GO:0019867;outer membrane;6.94192036703029e-05!GO:0008094;DNA-dependent ATPase activity;7.00134535595503e-05!GO:0000075;cell cycle checkpoint;7.03718131131255e-05!GO:0005769;early endosome;8.03179774854703e-05!GO:0009892;negative regulation of metabolic process;8.09705926149259e-05!GO:0015980;energy derivation by oxidation of organic compounds;8.39212118088065e-05!GO:0005773;vacuole;8.83000720500996e-05!GO:0016563;transcription activator activity;9.65010083086762e-05!GO:0043021;ribonucleoprotein binding;9.83470381197774e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000111658108890896!GO:0030029;actin filament-based process;0.000121259180229235!GO:0016126;sterol biosynthetic process;0.00012809672554413!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00013174228178714!GO:0006612;protein targeting to membrane;0.000204859207835648!GO:0005741;mitochondrial outer membrane;0.000205919773159439!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000210472154234917!GO:0046474;glycerophospholipid biosynthetic process;0.000229717049153071!GO:0033116;ER-Golgi intermediate compartment membrane;0.000234481253700423!GO:0016044;membrane organization and biogenesis;0.000269314885474017!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000286573900667264!GO:0004576;oligosaccharyl transferase activity;0.000304012764498432!GO:0051427;hormone receptor binding;0.000310152879416093!GO:0005048;signal sequence binding;0.000315965111580286!GO:0000786;nucleosome;0.00032147673093071!GO:0008361;regulation of cell size;0.000332806409287393!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000336946159310493!GO:0008092;cytoskeletal protein binding;0.000343894992721809!GO:0016049;cell growth;0.000354374421400626!GO:0005885;Arp2/3 protein complex;0.000355208141071313!GO:0008186;RNA-dependent ATPase activity;0.000356352809469543!GO:0008250;oligosaccharyl transferase complex;0.000367585587553586!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000408080149830769!GO:0005905;coated pit;0.000449979687577978!GO:0005657;replication fork;0.000458368569099818!GO:0000323;lytic vacuole;0.000458902176950108!GO:0005764;lysosome;0.000458902176950108!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00048561346497266!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000491220291807707!GO:0043681;protein import into mitochondrion;0.000500433991573939!GO:0048522;positive regulation of cellular process;0.000520421351382708!GO:0051168;nuclear export;0.000523315054548817!GO:0000776;kinetochore;0.000603918225310917!GO:0035257;nuclear hormone receptor binding;0.000637787824171651!GO:0008610;lipid biosynthetic process;0.000642328360334779!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000642328360334779!GO:0051252;regulation of RNA metabolic process;0.000657662858783758!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000670387398385873!GO:0007243;protein kinase cascade;0.000706728269443796!GO:0051789;response to protein stimulus;0.000709835420859456!GO:0006986;response to unfolded protein;0.000709835420859456!GO:0005791;rough endoplasmic reticulum;0.000730948875281299!GO:0016363;nuclear matrix;0.00073296297303745!GO:0001558;regulation of cell growth;0.000793059617428339!GO:0006950;response to stress;0.000830316555434707!GO:0051920;peroxiredoxin activity;0.000854523911550544!GO:0018196;peptidyl-asparagine modification;0.000856487665463786!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000856487665463786!GO:0006626;protein targeting to mitochondrion;0.000881936074697448!GO:0006414;translational elongation;0.000905663657238233!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000920170153223329!GO:0000059;protein import into nucleus, docking;0.000926175342552822!GO:0007264;small GTPase mediated signal transduction;0.000968863863168212!GO:0004004;ATP-dependent RNA helicase activity;0.000984219430101042!GO:0005874;microtubule;0.000986449786770157!GO:0046489;phosphoinositide biosynthetic process;0.000990651783398772!GO:0046467;membrane lipid biosynthetic process;0.000992555176422064!GO:0016481;negative regulation of transcription;0.00107410869870865!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00111232022065347!GO:0006302;double-strand break repair;0.00112936144999464!GO:0019222;regulation of metabolic process;0.00113892483499135!GO:0030663;COPI coated vesicle membrane;0.0011498718106019!GO:0030126;COPI vesicle coat;0.0011498718106019!GO:0006695;cholesterol biosynthetic process;0.00115640187908404!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00124174438770293!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00124174438770293!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00124174438770293!GO:0030133;transport vesicle;0.00126843737800357!GO:0044262;cellular carbohydrate metabolic process;0.00135883009062509!GO:0044452;nucleolar part;0.00147513977051404!GO:0003690;double-stranded DNA binding;0.00148495247009373!GO:0003729;mRNA binding;0.00155623691313871!GO:0065009;regulation of a molecular function;0.00167089000859335!GO:0007050;cell cycle arrest;0.00168278141374975!GO:0007088;regulation of mitosis;0.00171027859255776!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00175415384236058!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00175415384236058!GO:0007006;mitochondrial membrane organization and biogenesis;0.00179213108943155!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0018468887743405!GO:0003682;chromatin binding;0.00185409040710083!GO:0005684;U2-dependent spliceosome;0.00186468690318779!GO:0007093;mitotic cell cycle checkpoint;0.00190419662049787!GO:0048471;perinuclear region of cytoplasm;0.00195417396882458!GO:0015631;tubulin binding;0.00196457712739658!GO:0031072;heat shock protein binding;0.00197373186640817!GO:0008047;enzyme activator activity;0.00201738980051765!GO:0008033;tRNA processing;0.00206075031476046!GO:0007052;mitotic spindle organization and biogenesis;0.00207569244997927!GO:0000082;G1/S transition of mitotic cell cycle;0.00209093474741953!GO:0065007;biological regulation;0.00215260288436463!GO:0051087;chaperone binding;0.0021787656997555!GO:0003684;damaged DNA binding;0.00217998808960105!GO:0030137;COPI-coated vesicle;0.00229269508223234!GO:0048500;signal recognition particle;0.00244987591782502!GO:0006891;intra-Golgi vesicle-mediated transport;0.00245359928029015!GO:0016197;endosome transport;0.00245359928029015!GO:0008139;nuclear localization sequence binding;0.00247450717830305!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0025291947494718!GO:0006383;transcription from RNA polymerase III promoter;0.00261519886450486!GO:0030027;lamellipodium;0.00273006436204333!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00286435761723481!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00286435761723481!GO:0007059;chromosome segregation;0.00307230659320671!GO:0003678;DNA helicase activity;0.00311104350182008!GO:0006402;mRNA catabolic process;0.00327617872778242!GO:0005637;nuclear inner membrane;0.00337394490593675!GO:0030176;integral to endoplasmic reticulum membrane;0.00345996749860898!GO:0033673;negative regulation of kinase activity;0.00356208404515709!GO:0006469;negative regulation of protein kinase activity;0.00356208404515709!GO:0042802;identical protein binding;0.00361706629296874!GO:0051052;regulation of DNA metabolic process;0.00369167041441361!GO:0048487;beta-tubulin binding;0.00384273796413826!GO:0030880;RNA polymerase complex;0.00394732339505952!GO:0006310;DNA recombination;0.00412352330803024!GO:0030134;ER to Golgi transport vesicle;0.0043692536224838!GO:0051348;negative regulation of transferase activity;0.00453334267809207!GO:0006650;glycerophospholipid metabolic process;0.00463275163806067!GO:0008312;7S RNA binding;0.00475624236298354!GO:0017166;vinculin binding;0.00489646149852801!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00504578496440955!GO:0015002;heme-copper terminal oxidase activity;0.00504578496440955!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00504578496440955!GO:0004129;cytochrome-c oxidase activity;0.00504578496440955!GO:0008180;signalosome;0.00507698612470664!GO:0035258;steroid hormone receptor binding;0.00514450083760959!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00523815929181379!GO:0043284;biopolymer biosynthetic process;0.00535927682482895!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00540187897566156!GO:0045047;protein targeting to ER;0.00540187897566156!GO:0030384;phosphoinositide metabolic process;0.00540187897566156!GO:0051128;regulation of cellular component organization and biogenesis;0.00565233511795146!GO:0006839;mitochondrial transport;0.00566019652968137!GO:0004674;protein serine/threonine kinase activity;0.00585530903184812!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00589065467097917!GO:0030132;clathrin coat of coated pit;0.00598280472657147!GO:0043488;regulation of mRNA stability;0.00606567174889931!GO:0043487;regulation of RNA stability;0.00606567174889931!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00607635479214803!GO:0030521;androgen receptor signaling pathway;0.00619012594587008!GO:0030127;COPII vesicle coat;0.00621480789655556!GO:0012507;ER to Golgi transport vesicle membrane;0.00621480789655556!GO:0000910;cytokinesis;0.00662300439536499!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00668814881492282!GO:0015399;primary active transmembrane transporter activity;0.00668814881492282!GO:0030118;clathrin coat;0.00673496783522333!GO:0003711;transcription elongation regulator activity;0.00680029867822002!GO:0004177;aminopeptidase activity;0.00680029867822002!GO:0031901;early endosome membrane;0.00682694694340644!GO:0006595;polyamine metabolic process;0.00705751535500081!GO:0030658;transport vesicle membrane;0.00706022889459622!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00741411989823065!GO:0007017;microtubule-based process;0.00760006840564177!GO:0030041;actin filament polymerization;0.00802667902525688!GO:0046483;heterocycle metabolic process;0.00803503686711623!GO:0016272;prefoldin complex;0.00810144200598288!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00818820728102248!GO:0000428;DNA-directed RNA polymerase complex;0.00818820728102248!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00872630567499722!GO:0005096;GTPase activator activity;0.00874838278825538!GO:0050662;coenzyme binding;0.00895388667222361!GO:0005876;spindle microtubule;0.00927072403395834!GO:0005869;dynactin complex;0.00933955281264436!GO:0045045;secretory pathway;0.00947201696990423!GO:0006740;NADPH regeneration;0.0100046440877491!GO:0006098;pentose-phosphate shunt;0.0100046440877491!GO:0000049;tRNA binding;0.0105141493185145!GO:0006401;RNA catabolic process;0.0106384469974363!GO:0032508;DNA duplex unwinding;0.0108328537892448!GO:0032392;DNA geometric change;0.0108328537892448!GO:0006509;membrane protein ectodomain proteolysis;0.0110824007264783!GO:0033619;membrane protein proteolysis;0.0110824007264783!GO:0005832;chaperonin-containing T-complex;0.0111798033969858!GO:0007346;regulation of progression through mitotic cell cycle;0.0112122209521243!GO:0030119;AP-type membrane coat adaptor complex;0.0115510753049702!GO:0000339;RNA cap binding;0.0116428194041405!GO:0051539;4 iron, 4 sulfur cluster binding;0.0116873535899011!GO:0051270;regulation of cell motility;0.0117908742244173!GO:0015992;proton transport;0.0119011329699499!GO:0043022;ribosome binding;0.0119942118423102!GO:0031902;late endosome membrane;0.0122184180255622!GO:0051287;NAD binding;0.0124230130294576!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0125270777795927!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0125471438345568!GO:0006275;regulation of DNA replication;0.0125471438345568!GO:0006506;GPI anchor biosynthetic process;0.0125928629375773!GO:0006818;hydrogen transport;0.0126539486679029!GO:0051101;regulation of DNA binding;0.0128945258825964!GO:0006778;porphyrin metabolic process;0.01306233552537!GO:0033013;tetrapyrrole metabolic process;0.01306233552537!GO:0008154;actin polymerization and/or depolymerization;0.0132919926582416!GO:0006352;transcription initiation;0.0134326647595096!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.013791786514999!GO:0031124;mRNA 3'-end processing;0.0140988428130973!GO:0030659;cytoplasmic vesicle membrane;0.0141551994744485!GO:0005862;muscle thin filament tropomyosin;0.014301210906789!GO:0006505;GPI anchor metabolic process;0.014301210906789!GO:0001726;ruffle;0.0144970569372499!GO:0006220;pyrimidine nucleotide metabolic process;0.0145317819907682!GO:0006979;response to oxidative stress;0.0146156205688013!GO:0009112;nucleobase metabolic process;0.0146789304014458!GO:0006405;RNA export from nucleus;0.0150139824857488!GO:0006268;DNA unwinding during replication;0.0150351488974903!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0150351488974903!GO:0006497;protein amino acid lipidation;0.0150469144003451!GO:0030660;Golgi-associated vesicle membrane;0.015075514724125!GO:0030518;steroid hormone receptor signaling pathway;0.0150869935224133!GO:0008632;apoptotic program;0.0155635557451502!GO:0042158;lipoprotein biosynthetic process;0.0158614105107772!GO:0031625;ubiquitin protein ligase binding;0.0160216410112751!GO:0030032;lamellipodium biogenesis;0.0160310409236192!GO:0007034;vacuolar transport;0.0160363815466531!GO:0048518;positive regulation of biological process;0.0165918993845639!GO:0016741;transferase activity, transferring one-carbon groups;0.0166525978105896!GO:0008168;methyltransferase activity;0.0168334600809057!GO:0006611;protein export from nucleus;0.0168656937745757!GO:0000922;spindle pole;0.0169479144965856!GO:0045941;positive regulation of transcription;0.0169479144965856!GO:0022415;viral reproductive process;0.0170636905667683!GO:0006897;endocytosis;0.0171001988954147!GO:0010324;membrane invagination;0.0171001988954147!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0171001988954147!GO:0007040;lysosome organization and biogenesis;0.0174088935216843!GO:0007021;tubulin folding;0.0175851982942859!GO:0016408;C-acyltransferase activity;0.017691434527375!GO:0004527;exonuclease activity;0.0180390974285857!GO:0040008;regulation of growth;0.0181739408387288!GO:0050681;androgen receptor binding;0.0181739408387288!GO:0005774;vacuolar membrane;0.0186764791647558!GO:0006284;base-excision repair;0.018827897756255!GO:0045893;positive regulation of transcription, DNA-dependent;0.018827897756255!GO:0006892;post-Golgi vesicle-mediated transport;0.018827897756255!GO:0005100;Rho GTPase activator activity;0.018827897756255!GO:0009116;nucleoside metabolic process;0.0188380839572375!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0189752660225132!GO:0004518;nuclease activity;0.0190327706530213!GO:0030833;regulation of actin filament polymerization;0.0192820173209851!GO:0030131;clathrin adaptor complex;0.0192849674116345!GO:0006643;membrane lipid metabolic process;0.019785838262084!GO:0006289;nucleotide-excision repair;0.0198735691575739!GO:0006144;purine base metabolic process;0.0200138202545002!GO:0040011;locomotion;0.0205653733239587!GO:0015036;disulfide oxidoreductase activity;0.0205653733239587!GO:0007033;vacuole organization and biogenesis;0.0206290080022579!GO:0032984;macromolecular complex disassembly;0.0209326432013613!GO:0004003;ATP-dependent DNA helicase activity;0.0209326432013613!GO:0050790;regulation of catalytic activity;0.0212082034823072!GO:0043086;negative regulation of catalytic activity;0.0212396141909579!GO:0019206;nucleoside kinase activity;0.0218825748748464!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.022832915373473!GO:0051540;metal cluster binding;0.0231310948477491!GO:0051536;iron-sulfur cluster binding;0.0231310948477491!GO:0031272;regulation of pseudopodium formation;0.0232473526368877!GO:0031269;pseudopodium formation;0.0232473526368877!GO:0031344;regulation of cell projection organization and biogenesis;0.0232473526368877!GO:0031268;pseudopodium organization and biogenesis;0.0232473526368877!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0232473526368877!GO:0031274;positive regulation of pseudopodium formation;0.0232473526368877!GO:0022890;inorganic cation transmembrane transporter activity;0.0235941856663944!GO:0008147;structural constituent of bone;0.0237896338040688!GO:0000792;heterochromatin;0.0240538544272517!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0242710391070162!GO:0033043;regulation of organelle organization and biogenesis;0.0242710391070162!GO:0046519;sphingoid metabolic process;0.0242710391070162!GO:0006779;porphyrin biosynthetic process;0.0242710391070162!GO:0033014;tetrapyrrole biosynthetic process;0.0242710391070162!GO:0051098;regulation of binding;0.0249113740321151!GO:0003756;protein disulfide isomerase activity;0.0249974109092284!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0249974109092284!GO:0045892;negative regulation of transcription, DNA-dependent;0.0255461691941741!GO:0016301;kinase activity;0.0257545540011064!GO:0016584;nucleosome positioning;0.0257545540011064!GO:0030496;midbody;0.0257545540011064!GO:0007265;Ras protein signal transduction;0.0263275852662221!GO:0003746;translation elongation factor activity;0.0268372512962108!GO:0045792;negative regulation of cell size;0.0268980629907279!GO:0016125;sterol metabolic process;0.027324463437915!GO:0044433;cytoplasmic vesicle part;0.0273801423259099!GO:0030308;negative regulation of cell growth;0.0279843557605081!GO:0000096;sulfur amino acid metabolic process;0.0280526526738495!GO:0006118;electron transport;0.0284283429285902!GO:0042168;heme metabolic process;0.0284645104266088!GO:0006376;mRNA splice site selection;0.0287615655759516!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0287615655759516!GO:0051271;negative regulation of cell motility;0.0290357229867734!GO:0040012;regulation of locomotion;0.0292240896721658!GO:0000209;protein polyubiquitination;0.0294352145235333!GO:0006672;ceramide metabolic process;0.0295840559236111!GO:0022408;negative regulation of cell-cell adhesion;0.0297402429669134!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0299543907845835!GO:0043241;protein complex disassembly;0.0301109250946438!GO:0006417;regulation of translation;0.0312536077508848!GO:0030031;cell projection biogenesis;0.0313413554964332!GO:0043492;ATPase activity, coupled to movement of substances;0.0320387232066645!GO:0047485;protein N-terminus binding;0.0321250244849125!GO:0005586;collagen type III;0.0323227742082398!GO:0005784;translocon complex;0.0325679833063328!GO:0006739;NADP metabolic process;0.0329736592532409!GO:0033559;unsaturated fatty acid metabolic process;0.0330168854392056!GO:0006636;unsaturated fatty acid biosynthetic process;0.0330168854392056!GO:0008022;protein C-terminus binding;0.0330168854392056!GO:0008017;microtubule binding;0.0333403093083202!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0333703183256255!GO:0030508;thiol-disulfide exchange intermediate activity;0.033432248910454!GO:0031529;ruffle organization and biogenesis;0.0340933222129277!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0340933222129277!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0358392819426073!GO:0031418;L-ascorbic acid binding;0.0359476403385072!GO:0012506;vesicle membrane;0.0359619094177105!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0362256727716863!GO:0016407;acetyltransferase activity;0.036876856630617!GO:0005801;cis-Golgi network;0.0369604911115571!GO:0030433;ER-associated protein catabolic process;0.037015455326027!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.037015455326027!GO:0005092;GDP-dissociation inhibitor activity;0.0371960577482347!GO:0005758;mitochondrial intermembrane space;0.037294361659293!GO:0000287;magnesium ion binding;0.0374554114854082!GO:0043407;negative regulation of MAP kinase activity;0.0376560852953342!GO:0043624;cellular protein complex disassembly;0.0379638112142904!GO:0006607;NLS-bearing substrate import into nucleus;0.0383858553215979!GO:0035035;histone acetyltransferase binding;0.0389153468581727!GO:0009967;positive regulation of signal transduction;0.0394383620374479!GO:0008299;isoprenoid biosynthetic process;0.0394743385125223!GO:0030911;TPR domain binding;0.0395883106115289!GO:0016251;general RNA polymerase II transcription factor activity;0.0396856395261538!GO:0044437;vacuolar part;0.0397111475297428!GO:0016860;intramolecular oxidoreductase activity;0.0397895486112172!GO:0004448;isocitrate dehydrogenase activity;0.0397895486112172!GO:0031371;ubiquitin conjugating enzyme complex;0.0401452399241409!GO:0006378;mRNA polyadenylation;0.0406939257756505!GO:0005606;laminin-1 complex;0.0415313472332314!GO:0008064;regulation of actin polymerization and/or depolymerization;0.041859955015755!GO:0031301;integral to organelle membrane;0.0422493078083728!GO:0030145;manganese ion binding;0.0422493078083728!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0423061758028532!GO:0006644;phospholipid metabolic process;0.0428375527963657!GO:0031123;RNA 3'-end processing;0.0431559641653845!GO:0009225;nucleotide-sugar metabolic process;0.0433993365698017!GO:0001952;regulation of cell-matrix adhesion;0.0445041793563211!GO:0050178;phenylpyruvate tautomerase activity;0.0451017189327267!GO:0008538;proteasome activator activity;0.0451533679655574!GO:0005765;lysosomal membrane;0.0451533679655574!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0451533679655574!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0451533679655574!GO:0010257;NADH dehydrogenase complex assembly;0.0451533679655574!GO:0033108;mitochondrial respiratory chain complex assembly;0.0451533679655574!GO:0048468;cell development;0.0452122844066391!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0452122844066391!GO:0001953;negative regulation of cell-matrix adhesion;0.0452838859495809!GO:0006007;glucose catabolic process;0.0452905169862439!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0455898174019958!GO:0003779;actin binding;0.0461948053982249!GO:0050811;GABA receptor binding;0.0463609665928374!GO:0031970;organelle envelope lumen;0.0467898064693693!GO:0007242;intracellular signaling cascade;0.0477918678831118!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0481103462971196!GO:0006733;oxidoreduction coenzyme metabolic process;0.0481421353786638!GO:0006720;isoprenoid metabolic process;0.0485427028385446!GO:0007041;lysosomal transport;0.049916894569538
 +
|sample_id=11460
 +
|sample_note=
 +
|sample_sex=unknown
 +
|sample_species=Human (Homo sapiens)
 +
|sample_strain=
 +
|sample_tissue=heart
 +
|top_motifs=NKX2-2,8:1.10417249385;RXR{A,B,G}:1.06290978741;TLX1..3_NFIC{dimer}:1.03389285098;EVI1:1.03268474818;IKZF1:0.900095378962;FOX{I1,J2}:0.855693901681;GFI1:0.805377583584;AR:0.801499637301;UFEwm:0.792867560999;NKX3-1:0.791204528897;NR3C1:0.778670608916;TFAP4:0.765231381873;RXRA_VDR{dimer}:0.763397724305;POU3F1..4:0.716132809822;TFDP1:0.703140570838;POU1F1:0.692782918687;HOX{A5,B5}:0.677714686101;E2F1..5:0.674243070852;XCPE1{core}:0.661302793161;TOPORS:0.644142614052;ALX1:0.643540762777;CDC5L:0.621578713422;SMAD1..7,9:0.597268213646;SOX{8,9,10}:0.581499677339;MYB:0.577598690247;TEF:0.570008969874;TEAD1:0.546222160931;HSF1,2:0.531994678277;PAX5:0.525112529482;AIRE:0.507889593524;PBX1:0.503373845834;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.502097904583;XBP1:0.495304487014;ZNF238:0.479520313539;EN1,2:0.477584744905;GFI1B:0.466158323013;ALX4:0.458713121245;NFY{A,B,C}:0.447279239631;NFATC1..3:0.438325667997;STAT1,3:0.426861889511;SOX17:0.422920534327;LHX3,4:0.387414320336;ZNF143:0.386232264195;GTF2A1,2:0.384604971263;MYBL2:0.373629488038;TAL1_TCF{3,4,12}:0.371218162105;ARID5B:0.366266913093;HES1:0.355120477812;STAT5{A,B}:0.350098700474;MAZ:0.332122356015;NFIX:0.328388683959;EBF1:0.324839120075;GTF2I:0.320379605479;PAX8:0.316831506437;ZBTB16:0.304061464642;GATA4:0.297625295238;ONECUT1,2:0.297427790941;MZF1:0.289556926201;ELK1,4_GABP{A,B1}:0.284691225488;NANOG{mouse}:0.284224214565;EGR1..3:0.276637015201;ELF1,2,4:0.273891146255;TP53:0.271388839475;MTE{core}:0.263015297121;PITX1..3:0.253858403742;PAX4:0.244988361555;ZIC1..3:0.238696300359;RBPJ:0.238520090394;LEF1_TCF7_TCF7L1,2:0.229008634427;SOX2:0.227240599913;FOXP1:0.224835033948;HIC1:0.222125783322;HAND1,2:0.217198471316;PRDM1:0.214490681621;NFE2L2:0.205052190751;CRX:0.191707311811;KLF4:0.178339085832;PAX1,9:0.167819679459;GCM1,2:0.16010504993;STAT2,4,6:0.158595529777;GZF1:0.158376842597;TBX4,5:0.151766772571;GLI1..3:0.151298612947;PATZ1:0.143054093279;ADNP_IRX_SIX_ZHX:0.130893787726;HBP1_HMGB_SSRP1_UBTF:0.120158890305;YY1:0.116605370217;ZFP161:0.103132699184;NRF1:0.0806695148438;SPZ1:0.0803392703404;ZNF148:0.0721327110109;SP1:0.0625870600991;HMGA1,2:0.0591243457229;PAX3,7:0.0430209401416;BACH2:0.0376917066639;AHR_ARNT_ARNT2:0.0323140660345;GATA6:0.0145928597711;FOXD3:0.0117682985247;NKX6-1,2:0.0109087446039;SRF:0.0091954524829;HNF4A_NR2F1,2:-0.00104454928796;TFAP2{A,C}:-0.00225686961112;ETS1,2:-0.00643471933773;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.00836629114239;REST:-0.0138410582057;NFE2L1:-0.0144773604384;CDX1,2,4:-0.0160450734555;HOX{A4,D4}:-0.0197073367386;DBP:-0.0207563755665;T:-0.0396896034182;HOXA9_MEIS1:-0.0474509123564;HNF1A:-0.0495824921718;FOS_FOS{B,L1}_JUN{B,D}:-0.0605534041631;TBP:-0.0707977151126;NR5A1,2:-0.0886390517392;ATF6:-0.0902020798223;bHLH_family:-0.0942860621887;NR1H4:-0.0956705870457;TFAP2B:-0.0967478133037;NKX2-1,4:-0.106865426918;NFE2:-0.119707632759;MED-1{core}:-0.124706582553;NHLH1,2:-0.135269183785;HLF:-0.152462210826;ZNF384:-0.153580892681;ZBTB6:-0.155116543912;SPI1:-0.176153236556;CREB1:-0.194732796565;MAFB:-0.211236933241;FOX{F1,F2,J1}:-0.213501795502;PRRX1,2:-0.226508737478;FOSL2:-0.236130277666;SPIB:-0.243708650006;BPTF:-0.252824677436;NR6A1:-0.253228609878;TFCP2:-0.255870474262;FOXP3:-0.256138506647;FOXQ1:-0.256206218145;NKX3-2:-0.289506526753;EP300:-0.300323541918;MYFfamily:-0.310211432962;SOX5:-0.327896393632;OCT4_SOX2{dimer}:-0.337785093418;PDX1:-0.348300208708;HMX1:-0.359866498588;IKZF2:-0.364123262694;MTF1:-0.371243920817;TLX2:-0.375472412289;IRF7:-0.37602917884;NFKB1_REL_RELA:-0.38443594775;RFX1:-0.390244610721;MEF2{A,B,C,D}:-0.393017784214;ESRRA:-0.39728578485;FOXA2:-0.39916035969;NANOG:-0.399861754542;POU2F1..3:-0.402378677814;PPARG:-0.409488579333;POU5F1:-0.421883059437;BREu{core}:-0.426471184581;CEBPA,B_DDIT3:-0.43765428536;TGIF1:-0.450138008336;CUX2:-0.458429178748;ZNF423:-0.464217428453;SREBF1,2:-0.465808619012;ATF4:-0.498056817446;JUN:-0.509413438339;ESR1:-0.520428686403;DMAP1_NCOR{1,2}_SMARC:-0.522805449047;HIF1A:-0.525096668084;FOXM1:-0.53734640333;PAX2:-0.550728552935;PAX6:-0.569547083714;FOXO1,3,4:-0.575276232304;FOX{D1,D2}:-0.580948793412;RUNX1..3:-0.608032795318;FOXL1:-0.618088260309;POU6F1:-0.620256285951;IRF1,2:-0.641289800377;LMO2:-0.700763273784;ATF2:-0.735387476804;RORA:-0.756214926613;RREB1:-0.761504188806;ATF5_CREB3:-0.809600445887;NFIL3:-0.809791091951;VSX1,2:-0.814936758164;SNAI1..3:-0.855587927495;NKX2-3_NKX2-5:-0.937476821842;RFX2..5_RFXANK_RFXAP:-0.941183221562;ZEB1:-0.960605914737;MYOD1:-1.00465335646;FOXN1:-1.00507330259;HOX{A6,A7,B6,B7}:-1.88772106497
 +
|xref=
 +
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11460-119B2;search_select_hide=table117:FF:11460-119B2
 
}}
 
}}

Latest revision as of 09:02, 4 June 2020

Name:Fibroblast - Cardiac, donor6
Species:Human (Homo sapiens)
Library ID:CNhs12061
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueheart
dev stagefetus
sexunknown
agefetal
cell typefibroblast
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number2151
catalog numberSC6305
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005402
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12061 CAGE DRX008248 DRR009120
Accession ID Hg19

Library idBAMCTSS
CNhs12061 DRZ000545 DRZ001930
Accession ID Hg38

Library idBAMCTSS
CNhs12061 DRZ011895 DRZ013280
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)


Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis--0.0758
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.372
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.363
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.331
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural--0.0116
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19--0.0937
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle--0.284
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.297
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed--0.176
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte--0.111
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.366
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.313
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.123
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.0658
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.363
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.378
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.218
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.692
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.331
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.647
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample


JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in this sample. Pearson's correlation between the number of TFBSs estimated by using the position-weight matrix for each promoter and its expression is expressed as Z-score by taking the ones based on random position-weight matrix, and the tail probability of the normal distribution corresponding to the Z-score is taken as the resulting P-value. Lower P-value indicates more (non-random) association of the motif to promoter expression
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs12061

Jaspar motif P-value
MA0002.2 0.00137
MA0003.1 0.509
MA0004.1 0.273
MA0006.1 0.237
MA0007.1 0.461
MA0009.1 0.569
MA0014.1 0.605
MA0017.1 0.0823
MA0018.2 0.00157
MA0019.1 0.869
MA0024.1 6.95738e-5
MA0025.1 5.42245e-4
MA0027.1 0.716
MA0028.1 0.0162
MA0029.1 0.338
MA0030.1 0.0927
MA0031.1 0.263
MA0035.2 0.858
MA0038.1 0.334
MA0039.2 0.576
MA0040.1 0.622
MA0041.1 0.857
MA0042.1 0.929
MA0043.1 1.3628e-4
MA0046.1 0.0178
MA0047.2 0.621
MA0048.1 0.00885
MA0050.1 0.00173
MA0051.1 0.00248
MA0052.1 0.00943
MA0055.1 0.00772
MA0057.1 0.986
MA0058.1 0.174
MA0059.1 0.55
MA0060.1 0.00202
MA0061.1 7.59442e-6
MA0062.2 0.65
MA0065.2 0.00203
MA0066.1 0.376
MA0067.1 0.0168
MA0068.1 0.0742
MA0069.1 0.984
MA0070.1 0.827
MA0071.1 0.896
MA0072.1 0.36
MA0073.1 0.733
MA0074.1 0.849
MA0076.1 0.117
MA0077.1 0.556
MA0078.1 0.771
MA0079.2 0.624
MA0080.2 9.85847e-7
MA0081.1 0.514
MA0083.1 0.573
MA0084.1 0.024
MA0087.1 0.19
MA0088.1 0.3
MA0090.1 0.105
MA0091.1 0.515
MA0092.1 0.974
MA0093.1 0.293
MA0099.2 0.0199
MA0100.1 0.368
MA0101.1 0.0181
MA0102.2 0.139
MA0103.1 2.79595e-6
MA0104.2 0.077
MA0105.1 5.77358e-5
MA0106.1 0.937
MA0107.1 2.57612e-4
MA0108.2 0.653
MA0111.1 0.955
MA0112.2 0.0948
MA0113.1 0.451
MA0114.1 0.0042
MA0115.1 0.241
MA0116.1 0.0409
MA0117.1 0.0829
MA0119.1 0.0873
MA0122.1 0.889
MA0124.1 0.575
MA0125.1 0.668
MA0131.1 0.479
MA0135.1 0.0236
MA0136.1 1.62524e-5
MA0137.2 0.179
MA0138.2 0.326
MA0139.1 0.0575
MA0140.1 0.486
MA0141.1 0.801
MA0142.1 0.221
MA0143.1 0.549
MA0144.1 0.351
MA0145.1 0.491
MA0146.1 0.631
MA0147.1 0.177
MA0148.1 0.747
MA0149.1 0.28
MA0150.1 0.138
MA0152.1 0.156
MA0153.1 0.351
MA0154.1 0.0259
MA0155.1 0.687
MA0156.1 0.2
MA0157.1 0.0723
MA0159.1 0.143
MA0160.1 0.0735
MA0162.1 0.523
MA0163.1 0.0771
MA0164.1 0.85
MA0258.1 0.0396
MA0259.1 0.537



FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in 169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs12061

Novel motif P-value
1 0.33
10 0.714
100 0.824
101 0.561
102 0.451
103 0.322
104 0.852
105 0.0736
106 0.241
107 0.759
108 0.514
109 0.508
11 0.62
110 0.137
111 0.0725
112 0.236
113 0.0712
114 0.0775
115 0.388
116 0.408
117 0.933
118 0.374
119 0.372
12 0.165
120 0.183
121 0.79
122 0.0518
123 0.0583
124 0.19
125 0.0988
126 0.276
127 0.209
128 0.921
129 0.39
13 0.666
130 0.0669
131 0.998
132 0.408
133 0.531
134 0.534
135 0.806
136 0.236
137 0.13
138 0.525
139 0.018
14 0.211
140 0.886
141 0.959
142 0.0495
143 0.396
144 0.99
145 0.561
146 0.888
147 0.428
148 0.192
149 0.473
15 0.178
150 0.308
151 0.273
152 0.823
153 0.462
154 0.671
155 0.00425
156 0.916
157 0.3
158 0.00735
159 0.146
16 0.988
160 0.989
161 0.633
162 0.782
163 0.396
164 0.863
165 0.17
166 0.525
167 0.182
168 0.433
169 0.715
17 0.548
18 0.187
19 0.442
2 0.904
20 0.753
21 0.235
22 0.622
23 0.289
24 0.866
25 0.112
26 0.444
27 0.625
28 0.245
29 0.436
3 0.954
30 0.978
31 0.512
32 0.00202
33 0.931
34 0.796
35 0.0903
36 0.0652
37 0.544
38 0.524
39 0.273
4 0.0596
40 0.00893
41 0.429
42 0.782
43 0.126
44 0.248
45 0.323
46 0.542
47 0.802
48 0.758
49 0.0893
5 0.326
50 0.497
51 0.484
52 0.45
53 0.281
54 0.55
55 0.551
56 0.457
57 0.966
58 0.0725
59 0.427
6 0.942
60 0.0956
61 0.54
62 0.12
63 0.858
64 0.599
65 0.37
66 0.476
67 0.816
68 0.465
69 0.73
7 0.235
70 0.0186
71 0.388
72 0.553
73 0.279
74 0.967
75 0.276
76 0.879
77 0.991
78 0.673
79 0.111
8 0.922
80 0.266
81 0.29
82 0.0362
83 0.54
84 0.782
85 0.1
86 0.843
87 0.014
88 0.58
89 0.637
9 0.727
90 0.605
91 0.988
92 0.769
93 0.566
94 0.0626
95 0.637
96 0.451
97 0.516
98 0.0484
99 0.0313



de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown.
Analyst:NA
library id: CNhs12061


FANTOM5 (FF) ontology


Direct parent terms


Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship
Analyst: Hideya Kawaji

link to source data
data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0002494 (cardiocyte)
0000057 (fibroblast)
0002548 (cardiac fibroblast)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007100 (primary circulatory organ)
0000948 (heart)
0002384 (connective tissue)
0000479 (tissue)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0010317 (germ layer / neural crest derived structure)
0004535 (cardiovascular system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000057 (fibroblast sample)
0000001 (sample)
0000059 (human cardiac fibroblast sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship
Analyst: Hideya Kawaji

link to source data
data

CL:0000134 (mesenchymal cell)