FF:11524-119I3: Difference between revisions

Revision as of 16:21, 29 June 2012

Name:	Hepatic Stellate Cells (lipocyte), donor1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	liver
dev stage	NA
sex	NA
age	NA
cell type	adipocyte, lipocyte of liver
cell line	NA
company	Sciencell/3H
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	SC5305
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.117
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.21
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.0188
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.387
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.241
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.0295
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.485
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.258
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.152
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0.261
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.021
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.305
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.0946
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.15
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.54
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.423
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.349
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.709
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.485
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11335

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.988
MA0003.1	MA0003.1	0.239
MA0004.1	MA0004.1	0.746
MA0006.1	MA0006.1	0.238
MA0007.1	MA0007.1	0.0599
MA0009.1	MA0009.1	0.263
MA0014.1	MA0014.1	0.897
MA0017.1	MA0017.1	0.098
MA0018.2	MA0018.2	6.54865e-4
MA0019.1	MA0019.1	0.611
MA0024.1	MA0024.1	0.00368
MA0025.1	MA0025.1	0.0864
MA0027.1	MA0027.1	0.302
MA0028.1	MA0028.1	0.00407
MA0029.1	MA0029.1	0.0778
MA0030.1	MA0030.1	0.393
MA0031.1	MA0031.1	0.344
MA0035.2	MA0035.2	0.035
MA0038.1	MA0038.1	0.0561
MA0039.2	MA0039.2	0.485
MA0040.1	MA0040.1	0.599
MA0041.1	MA0041.1	0.306
MA0042.1	MA0042.1	0.798
MA0043.1	MA0043.1	7.15612e-5
MA0046.1	MA0046.1	4.68085e-6
MA0047.2	MA0047.2	0.567
MA0048.1	MA0048.1	0.604
MA0050.1	MA0050.1	1.03412e-5
MA0051.1	MA0051.1	0.00383
MA0052.1	MA0052.1	0.396
MA0055.1	MA0055.1	0.147
MA0057.1	MA0057.1	0.331
MA0058.1	MA0058.1	0.428
MA0059.1	MA0059.1	0.859
MA0060.1	MA0060.1	0.265
MA0061.1	MA0061.1	0.75
MA0062.2	MA0062.2	1.90516e-7
MA0065.2	MA0065.2	0.423
MA0066.1	MA0066.1	0.45
MA0067.1	MA0067.1	0.00101
MA0068.1	MA0068.1	0.852
MA0069.1	MA0069.1	0.977
MA0070.1	MA0070.1	0.0252
MA0071.1	MA0071.1	0.097
MA0072.1	MA0072.1	0.945
MA0073.1	MA0073.1	0.873
MA0074.1	MA0074.1	0.317
MA0076.1	MA0076.1	5.47735e-5
MA0077.1	MA0077.1	0.575
MA0078.1	MA0078.1	0.584
MA0079.2	MA0079.2	0.537
MA0080.2	MA0080.2	1.00055e-5
MA0081.1	MA0081.1	0.0227
MA0083.1	MA0083.1	2.08279e-4
MA0084.1	MA0084.1	0.778
MA0087.1	MA0087.1	0.26
MA0088.1	MA0088.1	0.951
MA0090.1	MA0090.1	1.78923e-4
MA0091.1	MA0091.1	0.00561
MA0092.1	MA0092.1	0.0379
MA0093.1	MA0093.1	0.694
MA0099.2	MA0099.2	0.874
MA0100.1	MA0100.1	0.272
MA0101.1	MA0101.1	0.447
MA0102.2	MA0102.2	0.00104
MA0103.1	MA0103.1	0.749
MA0104.2	MA0104.2	0.276
MA0105.1	MA0105.1	0.878
MA0106.1	MA0106.1	0.235
MA0107.1	MA0107.1	0.573
MA0108.2	MA0108.2	9.77038e-7
MA0111.1	MA0111.1	0.286
MA0112.2	MA0112.2	0.0117
MA0113.1	MA0113.1	0.0171
MA0114.1	MA0114.1	0.157
MA0115.1	MA0115.1	0.872
MA0116.1	MA0116.1	0.498
MA0117.1	MA0117.1	0.226
MA0119.1	MA0119.1	0.108
MA0122.1	MA0122.1	0.853
MA0124.1	MA0124.1	0.365
MA0125.1	MA0125.1	0.633
MA0131.1	MA0131.1	0.111
MA0135.1	MA0135.1	0.47
MA0136.1	MA0136.1	5.27802e-10
MA0137.2	MA0137.2	0.909
MA0138.2	MA0138.2	0.26
MA0139.1	MA0139.1	0.786
MA0140.1	MA0140.1	0.134
MA0141.1	MA0141.1	0.115
MA0142.1	MA0142.1	0.517
MA0143.1	MA0143.1	0.705
MA0144.1	MA0144.1	0.257
MA0145.1	MA0145.1	0.0928
MA0146.1	MA0146.1	0.0503
MA0147.1	MA0147.1	0.376
MA0148.1	MA0148.1	0.517
MA0149.1	MA0149.1	0.447
MA0150.1	MA0150.1	0.149
MA0152.1	MA0152.1	0.601
MA0153.1	MA0153.1	2.93136e-5
MA0154.1	MA0154.1	0.253
MA0155.1	MA0155.1	0.021
MA0156.1	MA0156.1	7.90517e-7
MA0157.1	MA0157.1	0.316
MA0159.1	MA0159.1	0.593
MA0160.1	MA0160.1	0.251
MA0162.1	MA0162.1	0.149
MA0163.1	MA0163.1	0.536
MA0164.1	MA0164.1	0.644
MA0258.1	MA0258.1	0.0455
MA0259.1	MA0259.1	0.313

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11335

Novel motif	Logo	P-value
1	1	0.781
10	10	0.0937
100	100	0.652
101	101	0.587
102	102	0.588
103	103	0.66
104	104	0.369
105	105	0.0559
106	106	0.0823
107	107	0.00971
108	108	0.848
109	109	0.481
11	11	0.258
110	110	0.183
111	111	0.231
112	112	0.615
113	113	0.364
114	114	0.589
115	115	0.534
116	116	0.0265
117	117	0.335
118	118	0.942
119	119	0.715
12	12	0.583
120	120	0.969
121	121	0.878
122	122	0.354
123	123	0.00938
124	124	0.659
125	125	0.205
126	126	0.83
127	127	0.959
128	128	0.0855
129	129	0.897
13	13	0.869
130	130	0.214
131	131	0.588
132	132	0.22
133	133	0.348
134	134	0.244
135	135	0.223
136	136	0.53
137	137	0.141
138	138	0.367
139	139	0.832
14	14	0.953
140	140	0.989
141	141	0.575
142	142	0.875
143	143	0.186
144	144	0.726
145	145	0.439
146	146	0.238
147	147	0.621
148	148	0.447
149	149	0.00998
15	15	0.788
150	150	0.321
151	151	0.502
152	152	0.104
153	153	0.163
154	154	0.398
155	155	0.3
156	156	0.531
157	157	0.258
158	158	0.0646
159	159	0.93
16	16	0.108
160	160	0.0421
161	161	0.582
162	162	0.161
163	163	0.611
164	164	0.68
165	165	0.229
166	166	0.0841
167	167	0.0647
168	168	0.817
169	169	0.0429
17	17	0.271
18	18	0.163
19	19	0.0603
2	2	0.104
20	20	0.307
21	21	0.876
22	22	0.0896
23	23	0.195
24	24	0.733
25	25	0.579
26	26	0.0681
27	27	0.356
28	28	0.337
29	29	0.626
3	3	0.935
30	30	0.0403
31	31	0.354
32	32	1.25526e-11
33	33	0.768
34	34	0.0763
35	35	0.722
36	36	0.19
37	37	0.567
38	38	0.81
39	39	0.17
4	4	0.483
40	40	0.224
41	41	0.381
42	42	0.913
43	43	0.306
44	44	0.749
45	45	0.149
46	46	0.322
47	47	0.677
48	48	0.377
49	49	0.367
5	5	0.891
50	50	0.35
51	51	0.328
52	52	0.252
53	53	0.683
54	54	0.435
55	55	0.964
56	56	0.408
57	57	0.738
58	58	0.483
59	59	0.0599
6	6	0.442
60	60	0.332
61	61	0.882
62	62	0.648
63	63	0.273
64	64	0.387
65	65	0.143
66	66	0.624
67	67	0.864
68	68	0.0533
69	69	0.139
7	7	0.823
70	70	0.291
71	71	0.623
72	72	0.751
73	73	0.22
74	74	0.563
75	75	0.747
76	76	0.234
77	77	0.0158
78	78	0.595
79	79	0.148
8	8	0.2
80	80	0.81
81	81	0.784
82	82	0.412
83	83	0.828
84	84	0.771
85	85	0.115
86	86	0.738
87	87	0.417
88	88	0.574
89	89	0.195
9	9	0.352
90	90	0.0286
91	91	0.196
92	92	0.659
93	93	0.904
94	94	0.852
95	95	0.689
96	96	0.856
97	97	0.5
98	98	0.976
99	99	0.00259

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11335

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000077 hepatic stellate cell sample
FF:0000210 human sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000055 (non-terminally differentiated cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0000034 (stem cell)
0000151 (secretory cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000499 (stromal cell)
0000327 (extracellular matrix secreting cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0000632 (hepatic stellate cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002107 (liver)
0002100 (trunk)
0000483 (epithelium)
0002530 (gland)
0002384 (connective tissue)
0000926 (mesoderm)
0000479 (tissue)
0001007 (digestive system)
0000077 (mixed endoderm/mesoderm-derived structure)
0002368 (endocrine gland)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000025 (tube)
0004119 (endoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0003914 (epithelial tube)
0007499 (epithelial sac)
0002050 (embryonic structure)
0005911 (endo-epithelium)
0004921 (subdivision of digestive tract)
0005423 (developing anatomical structure)
0000477 (anatomical cluster)
0000481 (multi-tissue structure)
0000467 (anatomical system)
0001062 (anatomical entity)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0009569 (subdivision of trunk)
0005291 (embryonic tissue)
0009854 (digestive tract diverticulum)
0003929 (gut epithelium)
0005177 (trunk region element)
0002365 (exocrine gland)
0003104 (mesenchyme)
0005057 (immune organ)
0005172 (abdomen element)
0006925 (digestive gland)
0005256 (trunk mesenchyme)
0001048 (primordium)
0000925 (endoderm)
0006598 (presumptive structure)
0009497 (epithelium of foregut-midgut junction)
0004185 (endodermal part of digestive tract)
0005173 (abdominal segment element)
0000015 (anatomical boundary)
0009856 (sac)
0002532 (epiblast (generic))
0001555 (digestive tract)
0002417 (abdominal segment of trunk)
0007026 (primitive gut)
0001041 (foregut)
0000949 (endocrine system)
0002330 (exocrine system)
0000916 (abdomen)
0002405 (immune system)
0002423 (hepatobiliary system)
0009142 (entire embryonic mesenchyme)
0006235 (foregut-midgut junction)
0006595 (presumptive endoderm)
0006603 (presumptive mesoderm)
0008835 (hepatic diverticulum)
0003894 (liver primordium)
0004161 (septum transversum)
0008836 (liver bud)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 6: / Line 6: @@
 |created_by=
 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr11:61520075..61520136,+!p1@C11orf9!2.19!315.27!C11orf9;;chr4:174451370..174451387,-!p1@HAND2!2.14!137.47!HAND2;;chr18:19749386..19749404,+!p2@GATA6!1.77!82.31!GATA6;;chr8:11561684..11561751,+!p1@GATA4!1.77!58.44!GATA4;;chr2:19558373..19558392,-!p1@OSR1!1.75!145.29!OSR1;;chr11:32457075..32457095,-!p1@WT1!1.69!47.74!WT1;;chr18:19749541..19749557,+!p1@GATA6!1.67!138.29!GATA6;;chr11:46299199..46299233,+!p1@CREB3L1!1.48!145.29!CREB3L1;;chr8:37963466..37963506,+!p3@ASH2L!1.43!32.51!ASH2L;;chr16:86544113..86544145,+!p1@FOXF1!1.40!30.04!FOXF1;;chr5:92919375..92919438,+!p6@NR2F1!1.39!25.52!NR2F1;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!1.39!23.46!SEBOX;;chr1:197886461..197886558,+!p1@LHX9!1.36!21.81!LHX9;;chr5:92918919..92918942,+!p1@NR2F1!1.33!88.49!NR2F1;;chr11:46299539..46299620,+!p2@CREB3L1!1.28!30.04!CREB3L1;;chr15:83953397..83953425,-!p1@BNC1!1.26!19.76!BNC1;;chr4:174450089..174450153,-!p2@HAND2!1.19!14.41!HAND2;;chr8:106330656..106330684,+!p1@ZFPM2!1.18!37.04!ZFPM2;;chr17:1959369..1959388,+!p2@HIC1!1.07!28.40!HIC1;;chr6:134210243..134210257,+!p1@TCF21!1.07!10.70!TCF21;;chr17:46655704..46655718,-!p2@HOXB4!0.99!13.17!HOXB4;;chr8:37963407..37963454,+!p2@ASH2L!0.98!26.34!ASH2L;;chr19:46801639..46801699,+!p1@HIF3A!0.98!8.64!HIF3A;;chr4:174451350..174451363,-!p3@HAND2!0.98!8.64!HAND2;;chr8:106330696..106330719,+!p2@ZFPM2!0.97!10.70!ZFPM2;;chr12:57504975..57505019,-!p2@STAT6!0.95!32.93!STAT6;;chr5:92918894..92918912,+!p2@NR2F1!0.94!25.93!NR2F1;;chr8:49833948..49833973,-!p2@SNAI2!0.93!49.80!SNAI2;;chr11:32457413..32457431,-!p2@WT1!0.92!7.41!WT1;;chr17:46622070..46622109,-!p1@HOXB2!0.90!16.05!HOXB2;;chr1:221052840..221052875,+!p4@HLX!0.90!8.23!HLX;;chr1:201979743..201979762,+!p1@ELF3!0.90!7.00!ELF3;;chrY:21906594..21906622,-!p1@KDM5D!0.90!7.00!KDM5D;;chr7:42276787..42276815,-!p1@GLI3!0.89!18.93!GLI3;;chr16:67881588..67881612,-!p2@CENPT!0.89!9.47!CENPT;;chr18:19749353..19749367,+!p4@GATA6!0.88!6.59!GATA6;;chr7:35293685..35293718,-!p1@TBX20!0.88!6.59!TBX20;;chr11:32456954..32456965,-!p4@WT1!0.88!6.59!WT1;;chr11:125034605..125034636,+!p2@PKNOX2!0.86!6.17!PKNOX2;;chr8:49833978..49833996,-!p1@SNAI2!0.85!134.17!SNAI2;;chr19:45260775..45260838,+!p5@BCL3!0.84!7.82!BCL3;;chr5:92918860..92918871,+!p10@NR2F1!0.84!6.59!NR2F1;;chr7:44143925..44143970,+!p1@AEBP1!0.83!137.88!AEBP1;;chr17:1958388..1958404,+!p1@HIC1!0.83!39.10!HIC1;;chr7:19157248..19157268,-!p1@TWIST1!0.83!16.87!TWIST1;;chr14:21994337..21994442,-!p1@SALL2!0.83!16.87!SALL2;;chr1:221052776..221052799,+!p1@HLX!0.83!10.70!HLX;;chr2:239756671..239756732,+!p1@TWIST2!0.81!18.52!TWIST2;;chr17:46621937..46621966,-!p2@HOXB2!0.81!15.64!HOXB2;;chr16:79633894..79633954,-!p3@MAF!0.81!11.11!MAF;;chr17:46622114..46622138,-!p4@HOXB2!0.81!8.64!HOXB2;;chr2:121493425..121493474,+!p1@GLI2!0.80!12.35!GLI2;;chr2:239756739..239756755,+!p2@TWIST2!0.80!9.47!TWIST2;;chr2:66662281..66662308,+!p1@MEIS1!0.78!18.52!MEIS1;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!0.77!4.94!SEBOX;;chr5:92919312..92919334,+!p13@NR2F1!0.77!4.94!NR2F1;;chr19:49865646..49865718,-!p1@TEAD2!0.76!44.86!TEAD2;;chr19:49864746..49864780,-!p2@TEAD2!0.75!6.59!TEAD2;;chr9:16870659..16870675,-!p2@BNC2!0.75!5.76!BNC2;;chr5:92918768..92918783,+!p8@NR2F1!0.74!4.53!NR2F1;;chr8:55370487..55370503,+!p1@SOX17!0.74!4.53!SOX17;;chr11:125034640..125034655,+!p1@PKNOX2!0.74!4.53!PKNOX2;;chr12:54447637..54447659,+!p4@HOXC4!0.74!4.53!HOXC4;;chr18:19749517..19749531,+!p3@GATA6!0.73!8.23!GATA6;;chr17:59477233..59477263,+!p1@TBX2!0.71!13.99!TBX2;;chr9:96717629..96717644,-!p1@BARX1!0.71!4.12!BARX1;;chr7:27153454..27153469,-!p2@HOXA3!0.71!4.12!HOXA3;;chr1:201979703..201979721,+!p2@ELF3!0.71!4.12!ELF3;;chr7:150945754..150945789,-!p2@SMARCD3!0.70!13.58!SMARCD3;;chr7:44143978..44143989,+!p2@AEBP1!0.70!7.82!AEBP1;;chr1:221052733..221052749,+!p2@HLX!0.70!5.35!HLX;;chr6:19837592..19837621,+!p1@ID4!0.69!26.75!ID4;;chr7:19157043..19157088,-!p2@TWIST1!0.69!10.70!TWIST1;;chr15:37390850..37390909,-!p3@MEIS2!0.69!8.23!MEIS2;;chr12:54447599..54447630,+!p3@HOXC4!0.69!4.94!HOXC4;;chr17:46675420..46675465,-!p3@HOXB6!0.68!4.53!HOXB6;;chr4:2263809..2263854,-!p1@MXD4!0.67!165.86!MXD4;;chr19:13106214..13106382,+!p1@NFIX!0.67!99.19!NFIX;;chr7:42276822..42276895,-!p2@GLI3!0.67!12.35!GLI3;;chr2:121493492..121493537,+!p2@GLI2!0.67!6.59!GLI2;;chr5:92918956..92918969,+!p4@NR2F1!0.67!4.12!NR2F1;;chr17:38498594..38498661,+!p2@RARA!0.66!13.58!RARA;;chr5:92919100..92919135,+!p3@NR2F1!0.66!4.53!NR2F1;;chr16:8962853..8962878,-!p1@CARHSP1!0.65!241.59!CARHSP1;;chr6:21597765..21597779,+!p2@SOX4!0.64!31.69!SOX4;;chr17:46655730..46655791,-!p1@HOXB4!0.64!9.47!HOXB4;;chr16:8962202..8962222,-!p3@CARHSP1!0.64!6.59!CARHSP1;;chr19:13134772..13134822,+!p2@NFIX!0.64!5.35!NFIX;;chr19:31840313..31840380,-!p1@TSHZ3!0.63!9.47!TSHZ3;;chr15:67430351..67430366,+!p10@SMAD3!0.63!3.29!SMAD3;;chr17:46621146..46621180,-!p10@HOXB2!0.63!3.29!HOXB2;;chr8:37963559..37963568,+!p6@ASH2L!0.63!3.29!ASH2L;;chr11:46299443..46299459,+!p4@CREB3L1!0.63!3.29!CREB3L1;;chr8:48650715.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FF:11524-119I3: Difference between revisions

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Revision as of 16:21, 29 June 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0