FF:11525-119I4: Difference between revisions

Revision as of 21:20, 9 July 2012

Name:	Cardiac Myocyte, donor1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	heart
dev stage	NA
sex	NA
age	NA
cell type	cardiac muscle cell
cell line	NA
company	Sciencell/3H
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	SC6205
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0622
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.47
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.0609
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.261
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.536
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.945
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.795
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.39
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0766
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.652
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.769
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.536
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	1.12
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12341

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.896
MA0003.1	MA0003.1	0.959
MA0004.1	MA0004.1	0.475
MA0006.1	MA0006.1	0.509
MA0007.1	MA0007.1	0.393
MA0009.1	MA0009.1	0.229
MA0014.1	MA0014.1	0.00273
MA0017.1	MA0017.1	0.59
MA0018.2	MA0018.2	1.03986e-5
MA0019.1	MA0019.1	0.377
MA0024.1	MA0024.1	1.46846e-4
MA0025.1	MA0025.1	1.70051e-5
MA0027.1	MA0027.1	0.827
MA0028.1	MA0028.1	9.91381e-10
MA0029.1	MA0029.1	0.0876
MA0030.1	MA0030.1	0.573
MA0031.1	MA0031.1	0.593
MA0035.2	MA0035.2	0.232
MA0038.1	MA0038.1	3.00513e-5
MA0039.2	MA0039.2	8.14171e-4
MA0040.1	MA0040.1	0.726
MA0041.1	MA0041.1	0.537
MA0042.1	MA0042.1	0.583
MA0043.1	MA0043.1	5.18946e-4
MA0046.1	MA0046.1	0.481
MA0047.2	MA0047.2	0.517
MA0048.1	MA0048.1	0.663
MA0050.1	MA0050.1	0.335
MA0051.1	MA0051.1	0.956
MA0052.1	MA0052.1	0.537
MA0055.1	MA0055.1	0.0108
MA0057.1	MA0057.1	0.853
MA0058.1	MA0058.1	0.183
MA0059.1	MA0059.1	0.532
MA0060.1	MA0060.1	5.36614e-10
MA0061.1	MA0061.1	0.801
MA0062.2	MA0062.2	3.61966e-21
MA0065.2	MA0065.2	0.682
MA0066.1	MA0066.1	0.247
MA0067.1	MA0067.1	0.165
MA0068.1	MA0068.1	0.845
MA0069.1	MA0069.1	0.563
MA0070.1	MA0070.1	0.393
MA0071.1	MA0071.1	0.358
MA0072.1	MA0072.1	0.541
MA0073.1	MA0073.1	0.707
MA0074.1	MA0074.1	0.2
MA0076.1	MA0076.1	3.28961e-12
MA0077.1	MA0077.1	0.252
MA0078.1	MA0078.1	0.764
MA0079.2	MA0079.2	0.239
MA0080.2	MA0080.2	7.94155e-6
MA0081.1	MA0081.1	8.09519e-4
MA0083.1	MA0083.1	0.0169
MA0084.1	MA0084.1	0.848
MA0087.1	MA0087.1	0.992
MA0088.1	MA0088.1	0.0447
MA0090.1	MA0090.1	0.0142
MA0091.1	MA0091.1	0.00132
MA0092.1	MA0092.1	0.0723
MA0093.1	MA0093.1	0.342
MA0099.2	MA0099.2	0.0417
MA0100.1	MA0100.1	0.116
MA0101.1	MA0101.1	0.364
MA0102.2	MA0102.2	0.581
MA0103.1	MA0103.1	0.00739
MA0104.2	MA0104.2	0.171
MA0105.1	MA0105.1	0.0274
MA0106.1	MA0106.1	0.172
MA0107.1	MA0107.1	0.287
MA0108.2	MA0108.2	0.874
MA0111.1	MA0111.1	0.334
MA0112.2	MA0112.2	4.83503e-4
MA0113.1	MA0113.1	0.01
MA0114.1	MA0114.1	0.766
MA0115.1	MA0115.1	0.867
MA0116.1	MA0116.1	0.167
MA0117.1	MA0117.1	0.352
MA0119.1	MA0119.1	0.0111
MA0122.1	MA0122.1	0.738
MA0124.1	MA0124.1	0.796
MA0125.1	MA0125.1	0.536
MA0131.1	MA0131.1	0.0334
MA0135.1	MA0135.1	0.162
MA0136.1	MA0136.1	2.39752e-13
MA0137.2	MA0137.2	0.219
MA0138.2	MA0138.2	0.259
MA0139.1	MA0139.1	0.192
MA0140.1	MA0140.1	0.34
MA0141.1	MA0141.1	0.834
MA0142.1	MA0142.1	0.253
MA0143.1	MA0143.1	0.152
MA0144.1	MA0144.1	0.0349
MA0145.1	MA0145.1	0.0615
MA0146.1	MA0146.1	0.713
MA0147.1	MA0147.1	0.439
MA0148.1	MA0148.1	0.113
MA0149.1	MA0149.1	0.344
MA0150.1	MA0150.1	0.538
MA0152.1	MA0152.1	7.94852e-4
MA0153.1	MA0153.1	0.027
MA0154.1	MA0154.1	0.154
MA0155.1	MA0155.1	0.379
MA0156.1	MA0156.1	2.40531e-9
MA0157.1	MA0157.1	0.29
MA0159.1	MA0159.1	0.765
MA0160.1	MA0160.1	0.96
MA0162.1	MA0162.1	0.395
MA0163.1	MA0163.1	0.169
MA0164.1	MA0164.1	0.671
MA0258.1	MA0258.1	0.132
MA0259.1	MA0259.1	0.262

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12341

Novel motif	Logo	P-value
1	1	0.89
10	10	0.889
100	100	0.584
101	101	0.654
102	102	0.145
103	103	0.0584
104	104	0.97
105	105	0.79
106	106	0.0122
107	107	3.57899e-4
108	108	0.477
109	109	0.406
11	11	0.835
110	110	0.753
111	111	0.968
112	112	0.176
113	113	0.784
114	114	0.124
115	115	0.414
116	116	0.722
117	117	0.585
118	118	0.363
119	119	0.146
12	12	0.652
120	120	0.908
121	121	0.886
122	122	0.185
123	123	0.478
124	124	0.378
125	125	0.395
126	126	0.595
127	127	0.527
128	128	7.27608e-4
129	129	0.257
13	13	0.324
130	130	0.567
131	131	0.646
132	132	0.716
133	133	0.514
134	134	0.463
135	135	0.867
136	136	0.0701
137	137	0.741
138	138	0.139
139	139	0.0245
14	14	0.59
140	140	0.00595
141	141	0.633
142	142	0.76
143	143	0.493
144	144	0.101
145	145	0.288
146	146	0.606
147	147	0.105
148	148	0.589
149	149	0.0337
15	15	0.106
150	150	0.358
151	151	0.143
152	152	0.848
153	153	0.193
154	154	0.894
155	155	0.253
156	156	0.678
157	157	0.313
158	158	0.113
159	159	0.76
16	16	0.222
160	160	0.0279
161	161	0.619
162	162	0.404
163	163	0.492
164	164	0.55
165	165	0.78
166	166	0.0257
167	167	0.595
168	168	0.219
169	169	0.0712
17	17	0.852
18	18	0.17
19	19	0.0745
2	2	0.078
20	20	0.152
21	21	0.342
22	22	0.154
23	23	0.0016
24	24	0.277
25	25	0.333
26	26	0.174
27	27	0.376
28	28	0.498
29	29	0.816
3	3	0.518
30	30	0.494
31	31	0.338
32	32	6.53836e-6
33	33	0.537
34	34	0.238
35	35	0.236
36	36	0.0506
37	37	0.767
38	38	0.863
39	39	0.231
4	4	0.788
40	40	0.0112
41	41	0.925
42	42	0.748
43	43	0.199
44	44	0.15
45	45	0.298
46	46	0.0597
47	47	0.796
48	48	0.47
49	49	0.223
5	5	0.146
50	50	0.77
51	51	0.609
52	52	0.18
53	53	0.586
54	54	0.846
55	55	0.0277
56	56	0.509
57	57	0.621
58	58	0.496
59	59	0.126
6	6	0.745
60	60	0.164
61	61	0.604
62	62	0.14
63	63	0.339
64	64	0.6
65	65	0.178
66	66	0.207
67	67	0.652
68	68	0.974
69	69	0.699
7	7	0.984
70	70	0.02
71	71	0.136
72	72	0.478
73	73	0.468
74	74	0.53
75	75	0.989
76	76	0.718
77	77	0.268
78	78	0.699
79	79	0.163
8	8	0.0852
80	80	0.835
81	81	0.192
82	82	0.0445
83	83	0.572
84	84	0.463
85	85	0.00875
86	86	0.456
87	87	0.2
88	88	0.361
89	89	0.0635
9	9	0.392
90	90	0.0813
91	91	0.0166
92	92	0.00178
93	93	0.371
94	94	0.368
95	95	0.0405
96	96	0.61
97	97	0.226
98	98	0.399
99	99	0.195

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12341

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000118 human cardiac myocyte sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000211 (electrically active cell)
0000255 (eukaryotic cell)
0002494 (cardiocyte)
0000737 (striated muscle cell)
0000746 (cardiac muscle cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007100 (primary circulatory organ)
0000948 (heart)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0010317 (germ layer / neural crest derived structure)
0004535 (cardiovascular system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000118 (human cardiac myocyte sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)
CL:0000513 (cardiac muscle myoblast)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr20:62680984..62680999,-!p1@SOX18!2.18!195.05!SOX18;;chr3:12330560..12330579,+!p1@PPARG!2.05!126.78!PPARG;;chr6:134210243..134210257,+!p1@TCF21!2.05!112.15!TCF21;;chr6:85474299..85474324,-!p1@TBX18!1.84!119.47!TBX18;;chr8:11561684..11561751,+!p1@GATA4!1.84!68.27!GATA4;;chr4:174451370..174451387,-!p1@HAND2!1.70!48.76!HAND2;;chr7:35293685..35293718,-!p1@TBX20!1.65!43.89!TBX20;;chr19:46801639..46801699,+!p1@HIF3A!1.63!41.45!HIF3A;;chr7:19157248..19157268,-!p1@TWIST1!1.60!104.84!TWIST1;;chr5:92918919..92918942,+!p1@NR2F1!1.53!141.41!NR2F1;;chr18:19749541..19749557,+!p1@GATA6!1.53!99.96!GATA6;;chr3:12329397..12329433,+!p2@PPARG!1.52!70.70!PPARG;;chr11:113930425..113930471,+!p1@ZBTB16!1.50!43.89!ZBTB16;;chr18:19749386..19749404,+!p2@GATA6!1.48!41.45!GATA6;;chr3:169381420..169381535,-!p1@MECOM!1.48!34.13!MECOM;;chr15:66994561..66994597,+!p2@SMAD6!1.45!63.39!SMAD6;;chr8:116681108..116681120,-!p9@TRPS1!1.39!29.26!TRPS1;;chr5:158526459..158526481,-!p2@EBF1!1.36!29.26!EBF1;;chr15:66994663..66994680,+!p1@SMAD6!1.34!48.76!SMAD6;;chr15:66994615..66994630,+!p3@SMAD6!1.33!29.26!SMAD6;;chr2:19558373..19558392,-!p1@OSR1!1.32!53.64!OSR1;;chr19:45971246..45971265,+!p1@FOSB!1.31!348.64!FOSB;;chr4:174450089..174450153,-!p2@HAND2!1.31!19.50!HAND2;;chr5:92919068..92919082,+!p5@NR2F1!1.29!21.94!NR2F1;;chr3:12329358..12329393,+!p3@PPARG!1.28!43.89!PPARG;;chr17:1959369..1959388,+!p2@HIC1!1.27!46.32!HIC1;;chr6:19837592..19837621,+!p1@ID4!1.25!99.96!ID4;;chr14:62162285..62162296,+!p3@HIF1A!1.25!85.33!HIF1A;;chr1:61548225..61548299,+!p1@NFIA!1.24!207.24!NFIA;;chr1:170633348..170633399,+!p2@PRRX1!1.23!21.94!PRRX1;;chr12:104531823..104531849,-!p5@NFYB!1.21!31.69!NFYB;;chr8:116681123..116681143,-!p4@TRPS1!1.21!29.26!TRPS1;;chr2:46524537..46524553,+!p1@EPAS1!1.20!1438.46!EPAS1;;chr2:45236540..45236577,-!p1@SIX2!1.19!14.63!SIX2;;chr10:131762504..131762555,-!p1@EBF3!1.19!14.63!EBF3;;chr9:4300050..4300118,-!p1@GLIS3!1.18!90.21!GLIS3;;chr14:62213827..62213853,+!p6@HIF1A!1.17!19.50!HIF1A;;chr1:158979872..158979898,+!p3@IFI16!1.16!41.45!IFI16;;chr7:44143997..44144008,+!p3@AEBP1!1.16!17.07!AEBP1;;chr1:23885981..23886002,-!p1@ID3!1.15!2243.02!ID3;;chr17:38498594..38498661,+!p2@RARA!1.13!41.45!RARA;;chr8:72756667..72756736,-!p2@MSC!1.13!19.50!MSC;;chr6:85474198..85474212,-!p3@TBX18!1.12!12.19!TBX18;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!1.12!12.19!SEBOX;;chr11:113930401..113930422,+!p3@ZBTB16!1.12!12.19!ZBTB16;;chr11:32457075..32457095,-!p1@WT1!1.12!12.19!WT1;;chr1:170633058..170633084,+!p5@PRRX1!1.12!12.19!PRRX1;;chr12:104531854..104531893,-!p2@NFYB!1.11!43.89!NFYB;;chr14:62162258..62162269,+!p2@HIF1A!1.10!112.15!HIF1A;;chr15:37392616..37392638,-!p2@MEIS2!1.10!36.57!MEIS2;;chr9:14314522..14314556,-!p3@NFIB!1.09!26.82!NFIB;;chr1:164528911..164528940,+!p7@PBX1!1.09!17.07!PBX1;;chr15:37392724..37392757,-!p1@MEIS2!1.08!51.20!MEIS2;;chr8:123793988..123794016,+!p1@ZHX2!1.08!19.50!ZHX2;;chr7:149470540..149470596,-!p2@ZNF467!1.08!14.63!ZNF467;;chr10:63809013..63809041,+!p3@ARID5B!1.07!60.95!ARID5B;;chr5:158526917..158526932,-!p1@EBF1!1.07!26.82!EBF1;;chr1:164528616..164528660,+!p5@PBX1!1.06!21.94!PBX1;;chr8:48650715..48650735,-!p1@CEBPD!1.04!1294.61!CEBPD;;chr2:239756739..239756755,+!p2@TWIST2!1.04!17.07!TWIST2;;chr13:37494365..37494381,-!p1@SMAD9!1.03!17.07!SMAD9;;chr2:85981008..85981025,+!p7@ATOH8!1.03!9.75!ATOH8;;chr2:85981027..85981047,+!p8@ATOH8!1.03!9.75!ATOH8;;chr2:85981107..85981120,+!p3@ATOH8!1.03!9.75!ATOH8;;chr4:174451350..174451363,-!p3@HAND2!1.03!9.75!HAND2;;chr15:31658288..31658338,+!p4@KLF13!1.03!9.75!KLF13;;chr6:85474219..85474228,-!p10@TBX18!1.03!9.75!TBX18;;chr1:119530493..119530572,-!p1@TBX15!1.03!9.75!TBX15;;chr9:14314476..14314487,-!p9@NFIB!1.03!9.75!NFIB;;chrY:21906594..21906622,-!p1@KDM5D!1.03!9.75!KDM5D;;chrX:106960180..106960197,-!p2@TSC22D3!1.02!36.57!TSC22D3;;chr9:73029219..73029289,-!p2@KLF9!1.02!29.26!KLF9;;chr2:46524897..46524911,+!p2@EPAS1!1.02!26.82!EPAS1;;chr8:72756063..72756125,-!p1@MSC!1.02!19.50!MSC;;chr18:19749517..19749531,+!p3@GATA6!1.02!17.07!GATA6;;chr20:50179368..50179392,-!p2@NFATC2!1.02!12.19!NFATC2;;chr14:75745523..75745537,+!p1@FOS!1.01!1111.76!FOS;;chr15:96874012..96874042,+!p2@NR2F2!1.01!85.33!NR2F2;;chr12:53774567..53774658,+!p2@SP1!1.01!46.32!SP1;;chr3:71179746..71179783,-!p7@FOXP1!1.01!31.69!FOXP1;;chr7:44143978..44143989,+!p2@AEBP1!1.01!17.07!AEBP1;;chr15:96881221..96881240,+!p19@NR2F2!1.01!12.19!NR2F2;;chr17:46621311..46621332,-!p8@HOXB2!1.01!12.19!HOXB2;;chr19:45260775..45260838,+!p5@BCL3!1.01!12.19!BCL3;;chr8:49833948..49833973,-!p2@SNAI2!1.00!58.51!SNAI2;;chr17:1958388..1958404,+!p1@HIC1!1.00!58.51!HIC1;;chr1:61548374..61548415,+!p4@NFIA!1.00!17.07!NFIA;;chr21:40177845..40177863,+!p1@ETS2!0.99!526.62!ETS2;;chr13:41240717..41240735,-!p2@FOXO1!0.99!60.95!FOXO1;;chr5:92918894..92918912,+!p2@NR2F1!0.99!29.26!NR2F1;;chr20:39946361..39946379,-!p2@ZHX3!0.99!26.82!ZHX3;;chr10:77161133..77161176,-!p3@ZNF503!0.99!19.50!ZNF503;;chr2:85980951..85981004,+!p1@ATOH8!0.99!14.63!ATOH8;;chr1:170632959..170632987,+!p4@PRRX1!0.99!9.75!PRRX1;;chr6:45296048..45296082,+!p1@RUNX2!0.98!9.75!RUNX2;;chr7:44143738..44143760,+!p4@AEBP1!0.98!9.75!AEBP1;;chr15:96876966..96877017,+!p12@NR2F2!0.97!12.19!NR2F2;;chr16:79634595..79634620,-!p2@MAF!0.95!14.63!MAF;;chr5:178368186..178368238,+!p1@ZNF454!0.95!14.63!ZNF454;;chr7:150945754..150945789,-!p2@SMARCD3!0.94!24.38!SMARCD3;;chr8:116680215..116680245,-!p6@TRPS1!0.94!12.19!TRPS1;;chrX:106960285..106960299,-!p1@TSC22D3!0.93!209.67!TSC22D3;;chr12:57504975..57505019,-!p2@STAT6!0.93!31.69!STAT6;;chr2:66662281..66662308,+!p1@MEIS1!0.93!26.82!MEIS1;;chr14:62213758..62213774,+!p8@HIF1A!0.93!9.75!HIF1A;;chr2:43453734..43453751,-!p1@ZFP36L2!0.92!809.44!ZFP36L2;;chr2:45236579..45236596,-!p2@SIX2!0.92!7.31!SIX2;;chr19:47523058..47523114,+!p1@NPAS1!0.92!7.31!NPAS1;;chr1:170633021..170633028,+!p27@PRRX1!0.92!7.31!PRRX1;;chr15:66994885..66994904,+!p7@SMAD6!0.92!7.31!SMAD6;;chr16:67198633..67198671,+!p1@HSF4!0.92!7.31!HSF4;;chr10:63816978..63816993,+!p12@ARID5B!0.92!7.31!ARID5B;;chr12:100867653..100867677,+!p2@NR1H4!0.92!7.31!NR1H4;;chrX:76937107..76937132,-!p17@ATRX!0.92!7.31!ATRX;;chr9:16727978..16728010,-!p6@BNC2!0.92!7.31!BNC2;;chr17:38219209..38219230,+!p1@THRA!0.90!95.08!THRA;;chr1:61547781..61547809,+!p5@NFIA!0.90!14.63!NFIA;;chr1:35656352..35656383,-!p7@SFPQ!0.90!12.19!SFPQ;;chr9:4300016..4300039,-!p2@GLIS3!0.90!12.19!GLIS3;;chr11:46299539..46299620,+!p2@CREB3L1!0.90!12.19!CREB3L1;;chr20:39317868..39317884,-!p1@MAFB!0.89!85.33!MAFB;;chr19:46272462..46272562,-!p1@SIX5!0.89!29.26!SIX5;;chr1:164528384..164528409,+!p3@PBX1!0.89!21.94!PBX1;;chr12:56401268..56401305,+!p1@IKZF4!0.89!14.63!IKZF4;;chr15:37392703..37392717,-!p8@MEIS2!0.89!9.75!MEIS2;;chr6:1612248..1612281,+!p2@FOXC1!0.89!7.31!FOXC1;;chr2:85980919..85980942,+!p4@ATOH8!0.89!7.31!ATOH8;;chr19:13106214..13106382,+!p1@NFIX!0.88!160.91!NFIX;;chr13:45151259..45151326,-!p2@TSC22D1!0.88!41.45!TSC22D1;;chr2:66662249..66662267,+!p2@MEIS1!0.88!26.82!MEIS1;;chr1:8483878..8483907,-!p4@RERE!0.88!26.82!RERE;;chr8:22550982..22550999,-!p1@EGR3!0.88!19.50!EGR3;;chr15:96874927..96874938,+!p8@NR2F2!0.88!14.63!NR2F2;;chr11:61520075..61520136,+!p1@C11orf9!0.88!14.63!C11orf9;;chr15:96869255..96869291,+!p6@NR2F2!0.88!12.19!NR2F2;;chr11:130184753..130184824,-!p1@ZBTB44!0.87!92.65!ZBTB44;;chr13:45151403..45151433,-!p5@TSC22D1!0.87!14.63!TSC22D1;;chr5:137801160..137801176,+!p1@EGR1!0.86!665.59!EGR1;;chr8:49833978..49833996,-!p1@SNAI2!0.86!136.53!SNAI2;;chr1:164528687..164528711,+!p6@PBX1!0.86!7.31!PBX1;;chr9:14314566..14314618,-!p1@NFIB!0.85!78.02!NFIB;;chr7:149470641..149470694,-!p1@ZNF467!0.85!29.26!ZNF467;;chr3:114819124..114819200,-!p3@ZBTB20!0.85!14.63!ZBTB20;;chr9:94186101..94186122,-!p1@NFIL3!0.84!87.77!NFIL3;;chr2:145277640..145277771,-!p1@ZEB2!0.84!85.33!ZEB2;;chr1:8484142..8484232,-!p10@RERE!0.84!17.07!RERE;;chr9:73028462..73028491,-!p8@KLF9!0.84!7.31!KLF9;;chr10:22022947..22022965,+!p7@MLLT10!0.84!7.31!MLLT10;;chr16:79634624..79634642,-!p1@MAF!0.83!24.38!MAF;;chr17:38498402..38498445,+!p3@RARA!0.83!21.94!RARA;;chr2:239756671..239756732,+!p1@TWIST2!0.83!19.50!TWIST2;;chr12:104532004..104532033,-!p4@NFYB!0.83!17.07!NFYB;;chr11:113930291..113930339,+!p2@ZBTB16!0.83!9.75!ZBTB16;;chr3:126076242..126076257,-!p1@KLF15!0.83!7.31!KLF15;;chr15:37392094..37392116,-!p6@MEIS2!0.83!7.31!MEIS2;;chr7:44143925..44143970,+!p1@AEBP1!0.82!136.53!AEBP1;;chr22:31742303..31742350,-!p1@PATZ1!0.82!65.83!PATZ1;;chr15:96873984..96873999,+!p3@NR2F2!0.82!43.89!NR2F2;;chr18:45457004..45457043,-!p3@SMAD2!0.82!26.82!SMAD2;;chr15:57511609..57511651,+!p2@TCF12!0.82!9.75!TCF12;;chr13:45151509..45151539,-!p6@TSC22D1!0.82!9.75!TSC22D1;;chr19:45261550..45261641,+!p6@BCL3!0.82!9.75!BCL3;;chr1:45805372..45805413,+!p4@TOE1!0.81!12.19!TOE1;;chr9:132427972..132428056,+!p1@PRRX2!0.81!7.31!PRRX2;;chr20:48599506..48599526,+!p1@SNAI1!0.80!36.57!SNAI1;;chr12:104531785..104531812,-!p3@NFYB!0.80!14.63!NFYB;;chr1:158969752..158969780,+!p6@IFI16!0.80!9.75!IFI16;;chr20:48809000..48809053,+!p12@CEBPB!0.80!7.31!CEBPB;;chr21:36260773..36260804,-!p7@RUNX1!0.80!7.31!RUNX1;;chr6:144329384..144329405,-!p1@PLAGL1!0.79!65.83!PLAGL1;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.79!56.08!GLIS2;;chr7:17338239..17338262,+!p2@AHR!0.79!41.45!AHR;;chr6:143266297..143266356,-!p1@HIVEP2!0.79!26.82!HIVEP2;;chr17:59477233..59477263,+!p1@TBX2!0.79!17.07!TBX2;;chr1:158979851..158979865,+!p5@IFI16!0.79!12.19!IFI16;;chr2:121493425..121493474,+!p1@GLI2!0.79!12.19!GLI2;;chr15:42749722..42749739,-!p2@ZFP106!0.79!9.75!ZFP106;;chr16:67881588..67881612,-!p2@CENPT!0.79!7.31!CENPT;;chr1:8877692..8877732,-!p1@RERE!0.78!43.89!RERE;;chr3:71179699..71179744,-!p2@FOXP1!0.78!41.45!FOXP1;;chr12:53614115..53614154,-!p1@RARG!0.78!29.26!RARG;;chr16:4323015..4323067,-!p2@TFAP4!0.78!14.63!TFAP4;;chr20:39946400..39946423,-!p3@ZHX3!0.78!9.75!ZHX3;;chr9:94186131..94186174,-!p2@NFIL3!0.77!43.89!NFIL3;;chr13:45151434..45151507,-!p3@TSC22D1!0.77!29.26!TSC22D1;;chrX:106960221..106960236,-!p3@TSC22D3!0.77!14.63!T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0.40!2.44!KLF8;;chrX:83757493..83757508,-!p2@HDX!0.40!2.44!HDX;;chr5:139494553..139494573,+!p6@PURA!0.40!2.44!PURA;;chr3:101546827..101546847,+!p2@NFKBIZ!0.40!2.44!NFKBIZ;;chr3:141747441..141747452,-!p4@TFDP2!0.40!2.44!TFDP2;;chr3:170075124..170075136,+!p4@SKIL!0.40!2.44!SKIL;;chr3:183415653..183415664,+!p2@YEATS2!0.40!2.44!YEATS2;;chr3:71355163..71355209,-!p5@FOXP1!0.40!2.44!FOXP1;;chr10:31320840..31320859,-!p4@ZNF438!0.40!2.44!ZNF438;;chr12:10854595..10854628,-!p7@CSDA!0.40!2.44!CSDA;;chr12:12764995..12765017,+!p3@CREBL2!0.40!2.44!CREBL2;;chr19:6279932..6280000,-!p1@MLLT1!0.39!56.08!MLLT1;;chr14:89029366..89029425,+!p1@ZC3H14!0.39!51.20!ZC3H14;;chr12:108154891..108154923,-!p1@PRDM4!0.39!19.50!PRDM4;;chr7:44925044..44925156,-!p1@PURB!0.39!17.07!PURB;;chr12:6798616..6798684,-!p2@ZNF384!0.39!14.63!ZNF384;;chr6:151712673..151712709,-!p1@ZBTB2!0.39!12.19!ZBTB2;;chr5:132299339..132299359,-!p4@AFF4!0.39!9.75!AFF4;;chr16:25269134..25269180,-!p1@ZKSCAN2!0.39!7.31!ZKSCAN2;;chr19:2819854..2819891,+!p1@ZNF554!0.39!7.31!ZNF554;;chr19:37329254..37329295,-!p1@ZNF790!0.39!4.88!ZNF790;;chr19:45250948..45250998,+!p3@BCL3!0.39!4.88!BCL3;;chr15:96869292..96869320,+!p15@NR2F2!0.39!2.44!NR2F2;;chr17:42297000..42297022,-!p15@UBTF!0.39!2.44!UBTF;;chrX:66763856..66763896,+!p1@AR!0.39!2.44!AR;;chr5:178450829..178450853,+!p2@ZNF879!0.39!2.44!ZNF879;;chr14:62193465..62193490,+!p7@HIF1A!0.39!2.44!HIF1A;;chr3:107318157..107318172,+!p6@BBX!0.39!2.44!BBX;;chr3:25469724..25469773,+!p1@RARB!0.39!2.44!RARB;;chr4:103422076..103422117,+!p5@NFKB1!0.39!2.44!NFKB1;;chr15:85291785..85291848,+!p1@ZNF592!0.38!39.01!ZNF592;;chr11:695006..695074,-!p1@DEAF1!0.38!34.13!DEAF1;;chr3:52719888..52719908,-!p2@PBRM1!0.38!9.75!PBRM1;;chr19:58258202..58258226,+!p3@ZNF776!0.38!9.75!ZNF776;;chr18:72922777..72922808,+!p2@TSHZ1!0.38!9.75!TSHZ1;;chr19:56915668..56915732,+!p1@ZNF583!0.38!7.31!ZNF583;;chr2:148778973..148779035,+!p3@MBD5!0.38!4.88!MBD5;;chr2:145274981..145274994,-!p9@ZEB2!0.38!2.44!ZEB2;;chr2:166326200..166326216,+!p1@CSRNP3!0.38!2.44!CSRNP3;;chr19:58400344..58400364,-!p2@ZNF814!0.38!2.44!ZNF814;;chr20:48807648..48807671,+!p9@CEBPB!0.38!2.44!CEBPB;;chr10:94449649..94449664,+!p3@HHEX!0.38!2.44!HHEX;;chr12:49445984..49446002,-!p3@MLL2!0.38!2.44!MLL2;;chr14:21566882..21566898,-!p3@ZNF219!0.38!2.44!ZNF219;;chr14:64971404..64971415,+!p7@ZBTB1!0.38!2.44!ZBTB1;;chrX:152599579..152599595,+!p2@ZNF275!0.38!2.44!ZNF275;;chr9:88969226..88969237,-!p4@ZCCHC6!0.38!2.44!ZCCHC6;;chrX:84499081..84499115,+!p2@ZNF711!0.38!2.44!ZNF711;;chr16:69726820..69726843,+!p3@NFAT5!0.38!2.44!NFAT5;;chr17:79881332..79881348,-!p3@MAFG!0.38!2.44!MAFG;;chr18:3448422..3448439,+!p11@TGIF1!0.38!2.44!TGIF1;;chr19:12203069..12203094,+!p2@ZNF788!0.38!2.44!ZNF788;;chr19:13213662..13213686,-!p1@LYL1!0.38!2.44!LYL1;;chr19:3366625..3366629,+!p4@NFIC!0.38!2.44!NFIC;;chr19:35417844..35417877,+!p2@ZNF30!0.38!2.44!ZNF30;;chr6:28234822..28234836,+!p1@ZNF187!0.38!2.44!ZNF187;;chr8:72756267..72756296,-!p4@MSC!0.38!2.44!MSC;;chr21:36260980..36261011,-!p1@RUNX1!0.37!60.95!RUNX1;;chr19:52873166..52873208,+!p1@ZNF880!0.37!29.26!ZNF880;;chr1:67390665..67390698,+!p1@MIER1!0.37!29.26!MIER1;;chr16:29819403..29819442,+!p5@MAZ!0.37!17.07!MAZ;;chr17:40440481..40440550,+!p1@STAT5A!0.37!14.63!STAT5A;;chr19:47617013..47617069,-!p2@ZC3H4!0.37!12.19!ZC3H4;;chr19:44488330..44488379,+!p1@ZNF155!0.37!9.75!ZNF155;;chr2:85197924..85197955,+!p3@KCMF1!0.37!7.31!KCMF1;;chr4:146402966..146402985,+!p2@SMAD1!0.37!7.31!SMAD1;;chr22:20748456..20748488,+!p2@ZNF74!0.37!4.88!ZNF74;;
+|ffid_belonging_in_development=CL:0000355,CL:0000222,CL:0000513
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11525-119I4: Difference between revisions

From FANTOM5_SSTAR

Revision as of 21:20, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0